View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19372_high_5 (Length: 607)

Name: NF19372_high_5
Description: NF19372
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19372_high_5
NF19372_high_5
[»] chr4 (41 HSPs)
chr4 (323-482)||(24343470-24343631)
chr4 (335-482)||(7012041-7012196)
chr4 (316-479)||(21945459-21945618)
chr4 (347-479)||(20743210-20743350)
chr4 (323-482)||(23292927-23293082)
chr4 (327-467)||(20521801-20521941)
chr4 (323-482)||(11931243-11931409)
chr4 (361-482)||(3144588-3144710)
chr4 (390-482)||(53381531-53381625)
chr4 (21-139)||(56537871-56537989)
chr4 (417-482)||(17876219-17876284)
chr4 (317-407)||(16402223-16402313)
chr4 (342-474)||(32910533-32910673)
chr4 (345-482)||(40783942-40784071)
chr4 (323-482)||(36635287-36635448)
chr4 (360-482)||(18513176-18513300)
chr4 (366-482)||(19230242-19230362)
chr4 (341-482)||(3947702-3947844)
chr4 (412-482)||(30982808-30982877)
chr4 (323-460)||(944625-944761)
chr4 (412-482)||(10133757-10133827)
chr4 (371-482)||(28964189-28964296)
chr4 (323-482)||(35157926-35158081)
chr4 (316-478)||(49430982-49431140)
chr4 (371-459)||(31243500-31243596)
chr4 (428-482)||(715546-715600)
chr4 (428-482)||(752872-752926)
chr4 (440-482)||(25950473-25950515)
chr4 (371-413)||(46180942-46180984)
chr4 (441-482)||(848039-848080)
chr4 (327-482)||(5414102-5414264)
chr4 (435-482)||(19482750-19482797)
chr4 (435-481)||(7424729-7424774)
chr4 (412-482)||(16073443-16073512)
chr4 (428-482)||(29205532-29205586)
chr4 (341-411)||(34515882-34515952)
chr4 (412-481)||(4157198-4157266)
chr4 (412-481)||(4157485-4157553)
chr4 (341-402)||(44796979-44797040)
chr4 (412-444)||(6274004-6274036)
chr4 (430-482)||(34200218-34200270)
[»] chr6 (45 HSPs)
chr6 (360-482)||(34446565-34446689)
chr6 (315-482)||(34595089-34595252)
chr6 (360-480)||(12235462-12235578)
chr6 (323-411)||(6389706-6389794)
chr6 (323-482)||(8776909-8777069)
chr6 (321-411)||(2153895-2153985)
chr6 (323-482)||(9107300-9107466)
chr6 (335-482)||(9658854-9658998)
chr6 (333-481)||(12696297-12696446)
chr6 (323-482)||(16766660-16766826)
chr6 (321-482)||(17168398-17168561)
chr6 (412-480)||(32978842-32978909)
chr6 (327-482)||(10339055-10339218)
chr6 (435-482)||(31959221-31959268)
chr6 (412-482)||(18367896-18367965)
chr6 (325-411)||(30866152-30866238)
chr6 (316-402)||(34073364-34073450)
chr6 (376-482)||(4420121-4420222)
chr6 (323-408)||(7625085-7625170)
chr6 (435-480)||(8389411-8389456)
chr6 (323-411)||(9027141-9027229)
chr6 (324-482)||(13360314-13360467)
chr6 (340-482)||(28152079-28152216)
chr6 (340-485)||(17841527-17841668)
chr6 (387-483)||(24807066-24807163)
chr6 (435-482)||(31385001-31385048)
chr6 (336-402)||(7996395-7996461)
chr6 (336-402)||(8022340-8022406)
chr6 (412-482)||(32313464-32313534)
chr6 (323-430)||(7938079-7938183)
chr6 (323-482)||(7977771-7977926)
chr6 (346-411)||(12086353-12086418)
chr6 (361-413)||(7569174-7569226)
chr6 (323-411)||(13851699-13851787)
chr6 (323-402)||(426531-426610)
chr6 (323-402)||(5000643-5000722)
chr6 (323-402)||(21395325-21395403)
chr6 (378-482)||(12236676-12236777)
chr6 (363-482)||(26247429-26247549)
chr6 (435-480)||(9025448-9025493)
chr6 (361-414)||(19602186-19602239)
chr6 (371-461)||(12627539-12627625)
chr6 (359-477)||(12627761-12627876)
chr6 (317-393)||(13211307-13211383)
chr6 (360-482)||(28715295-28715413)
[»] chr3 (57 HSPs)
chr3 (323-481)||(24204983-24205137)
chr3 (352-482)||(25074781-25074913)
chr3 (316-471)||(25651977-25652134)
chr3 (340-487)||(37077338-37077493)
chr3 (361-477)||(12704597-12704715)
chr3 (359-482)||(52369774-52369905)
chr3 (327-482)||(16789586-16789742)
chr3 (361-470)||(21211289-21211400)
chr3 (380-482)||(40993276-40993374)
chr3 (371-482)||(3730109-3730213)
chr3 (351-482)||(15864824-15864950)
chr3 (324-481)||(28917965-28918120)
chr3 (325-482)||(55401040-55401193)
chr3 (323-482)||(15999951-16000112)
chr3 (323-482)||(7171465-7171619)
chr3 (351-482)||(8903423-8903553)
chr3 (325-402)||(8587038-8587115)
chr3 (358-484)||(8789487-8789611)
chr3 (371-482)||(20503476-20503583)
chr3 (380-482)||(21861589-21861693)
chr3 (340-413)||(25948893-25948966)
chr3 (430-482)||(8039284-8039336)
chr3 (323-411)||(8383220-8383308)
chr3 (388-480)||(12100297-12100385)
chr3 (323-402)||(15796311-15796390)
chr3 (371-481)||(29508455-29508567)
chr3 (435-482)||(34185053-34185100)
chr3 (323-427)||(34307770-34307876)
chr3 (412-482)||(2408591-2408661)
chr3 (340-468)||(10954932-10955056)
chr3 (327-413)||(16192756-16192842)
chr3 (323-482)||(27903596-27903756)
chr3 (428-482)||(49651717-49651771)
chr3 (371-482)||(51512118-51512231)
chr3 (422-482)||(5407200-5407260)
chr3 (435-482)||(1389909-1389956)
chr3 (352-411)||(1830335-1830394)
chr3 (435-482)||(3163972-3164019)
chr3 (325-400)||(4466619-4466694)
chr3 (323-402)||(4990984-4991063)
chr3 (366-427)||(20691325-20691383)
chr3 (435-482)||(27505322-27505369)
chr3 (435-482)||(40052383-40052430)
chr3 (323-401)||(3164043-3164121)
chr3 (435-481)||(4987222-4987268)
chr3 (322-364)||(10335341-10335383)
chr3 (412-482)||(14209173-14209242)
chr3 (340-402)||(21720744-21720806)
chr3 (321-411)||(25093463-25093553)
chr3 (436-482)||(51206294-51206340)
chr3 (323-355)||(14027978-14028010)
chr3 (439-483)||(14216978-14217022)
chr3 (439-483)||(14223107-14223151)
chr3 (327-395)||(14829657-14829724)
chr3 (327-411)||(32804548-32804631)
chr3 (359-411)||(34189426-34189478)
chr3 (318-402)||(39001990-39002074)
[»] chr5 (45 HSPs)
chr5 (21-139)||(6314191-6314309)
chr5 (323-482)||(26205695-26205856)
chr5 (313-460)||(21137642-21137789)
chr5 (323-481)||(21190998-21191152)
chr5 (359-472)||(43554520-43554634)
chr5 (323-482)||(21522713-21522879)
chr5 (323-482)||(21533279-21533445)
chr5 (360-482)||(2419857-2419985)
chr5 (352-482)||(28588615-28588741)
chr5 (323-409)||(42469184-42469270)
chr5 (323-471)||(15382440-15382592)
chr5 (323-402)||(6326314-6326393)
chr5 (340-480)||(18586232-18586367)
chr5 (323-401)||(13287417-13287495)
chr5 (358-411)||(18607105-18607158)
chr5 (360-472)||(21577055-21577167)
chr5 (433-482)||(38464314-38464363)
chr5 (323-411)||(16203803-16203891)
chr5 (371-481)||(30502330-30502436)
chr5 (371-481)||(30542673-30542779)
chr5 (340-481)||(43001780-43001922)
chr5 (323-482)||(21541993-21542159)
chr5 (327-412)||(19293430-19293515)
chr5 (371-478)||(21194068-21194171)
chr5 (325-402)||(22013379-22013456)
chr5 (330-402)||(24906318-24906390)
chr5 (435-482)||(14873593-14873640)
chr5 (321-400)||(19552562-19552641)
chr5 (435-482)||(19820329-19820376)
chr5 (331-447)||(25863175-25863293)
chr5 (345-482)||(42893345-42893478)
chr5 (345-411)||(3966488-3966554)
chr5 (412-482)||(7677765-7677834)
chr5 (335-413)||(15410454-15410532)
chr5 (433-471)||(39342511-39342549)
chr5 (323-364)||(6401461-6401502)
chr5 (435-472)||(17088362-17088399)
chr5 (346-411)||(18288059-18288124)
chr5 (371-412)||(21194212-21194253)
chr5 (358-406)||(2577193-2577241)
chr5 (326-402)||(6247588-6247664)
chr5 (323-355)||(19453122-19453154)
chr5 (371-411)||(31264449-31264489)
chr5 (336-400)||(32428945-32429009)
chr5 (358-427)||(39695989-39696060)
[»] chr7 (45 HSPs)
chr7 (317-478)||(43249950-43250118)
chr7 (358-482)||(7133213-7133339)
chr7 (359-457)||(23930218-23930318)
chr7 (313-482)||(4017730-4017900)
chr7 (365-460)||(5938477-5938574)
chr7 (351-470)||(38804502-38804623)
chr7 (323-482)||(598171-598326)
chr7 (361-472)||(12278836-12278943)
chr7 (323-482)||(21880117-21880270)
chr7 (325-402)||(27945006-27945083)
chr7 (435-484)||(32287402-32287451)
chr7 (344-445)||(17780056-17780159)
chr7 (325-482)||(24339607-24339771)
chr7 (345-482)||(32308105-32308249)
chr7 (435-482)||(9778576-9778623)
chr7 (371-482)||(1401036-1401141)
chr7 (341-481)||(22868023-22868164)
chr7 (326-482)||(43027405-43027562)
chr7 (323-482)||(5409772-5409932)
chr7 (316-411)||(18233606-18233703)
chr7 (359-482)||(23751899-23752017)
chr7 (412-470)||(33994261-33994318)
chr7 (439-480)||(8842282-8842323)
chr7 (328-471)||(26733272-26733411)
chr7 (324-396)||(11722121-11722193)
chr7 (358-484)||(20549789-20549911)
chr7 (435-482)||(6490787-6490834)
chr7 (326-478)||(13770657-13770810)
chr7 (435-482)||(17852071-17852118)
chr7 (324-395)||(19206014-19206085)
chr7 (412-482)||(7438766-7438835)
chr7 (316-350)||(10230134-10230168)
chr7 (333-411)||(15902795-15902873)
chr7 (371-413)||(17307904-17307946)
chr7 (423-481)||(28943351-28943409)
chr7 (433-479)||(40287306-40287352)
chr7 (412-481)||(26033392-26033460)
chr7 (360-401)||(41360910-41360951)
chr7 (376-426)||(5835263-5835310)
chr7 (323-363)||(13557800-13557840)
chr7 (380-482)||(15680829-15680927)
chr7 (323-411)||(17851394-17851482)
chr7 (323-411)||(21140990-21141078)
chr7 (328-411)||(22683763-22683844)
chr7 (323-411)||(26329390-26329478)
[»] chr8 (51 HSPs)
chr8 (323-464)||(14513127-14513270)
chr8 (323-482)||(39820392-39820546)
chr8 (325-482)||(31556962-31557114)
chr8 (327-482)||(29510234-29510396)
chr8 (358-482)||(13009423-13009554)
chr8 (323-481)||(44067479-44067644)
chr8 (328-411)||(28883886-28883969)
chr8 (360-482)||(30067969-30068087)
chr8 (359-481)||(1676711-1676829)
chr8 (358-482)||(40063949-40064080)
chr8 (345-484)||(3658132-3658273)
chr8 (327-402)||(37283827-37283902)
chr8 (412-482)||(17751704-17751774)
chr8 (412-482)||(17760691-17760761)
chr8 (323-482)||(22651939-22652105)
chr8 (325-411)||(24362210-24362296)
chr8 (322-481)||(926730-926885)
chr8 (379-482)||(2035758-2035866)
chr8 (346-481)||(20679337-20679468)
chr8 (430-482)||(13397617-13397669)
chr8 (340-482)||(36450695-36450833)
chr8 (358-482)||(35431081-35431201)
chr8 (423-482)||(38487158-38487217)
chr8 (428-482)||(4673355-4673409)
chr8 (440-482)||(34127173-34127215)
chr8 (371-481)||(3025562-3025668)
chr8 (430-482)||(13403172-13403224)
chr8 (327-395)||(13436988-13437056)
chr8 (412-460)||(14659658-14659706)
chr8 (371-461)||(18646183-18646270)
chr8 (366-413)||(3508058-3508105)
chr8 (435-482)||(8798794-8798841)
chr8 (439-482)||(13436911-13436954)
chr8 (412-482)||(3951477-3951546)
chr8 (428-482)||(6065587-6065641)
chr8 (323-482)||(24413500-24413656)
chr8 (412-482)||(34450962-34451031)
chr8 (325-402)||(4673442-4673519)
chr8 (336-393)||(10497842-10497899)
chr8 (371-482)||(14134710-14134817)
chr8 (437-482)||(15816059-15816104)
chr8 (441-482)||(16641910-16641951)
chr8 (333-402)||(20873042-20873111)
chr8 (322-355)||(26609815-26609848)
chr8 (322-411)||(28385002-28385091)
chr8 (358-402)||(4611532-4611576)
chr8 (428-468)||(14639745-14639785)
chr8 (441-481)||(16987990-16988030)
chr8 (435-471)||(22943301-22943337)
chr8 (343-411)||(34897068-34897136)
chr8 (323-355)||(43737877-43737909)
[»] chr2 (41 HSPs)
chr2 (323-482)||(11307935-11308099)
chr2 (322-482)||(23354582-23354749)
chr2 (325-481)||(23354926-23355089)
chr2 (333-482)||(18840954-18841099)
chr2 (366-482)||(34006931-34007044)
chr2 (314-414)||(12748644-12748738)
chr2 (376-482)||(18889520-18889634)
chr2 (328-481)||(2438661-2438808)
chr2 (316-402)||(30404867-30404952)
chr2 (342-423)||(25544465-25544546)
chr2 (412-482)||(37419803-37419872)
chr2 (323-482)||(15972836-15972991)
chr2 (357-471)||(24011033-24011149)
chr2 (335-411)||(21616737-21616813)
chr2 (323-402)||(18276484-18276563)
chr2 (351-410)||(19573969-19574028)
chr2 (357-411)||(10535767-10535821)
chr2 (435-481)||(19942336-19942382)
chr2 (333-411)||(23717999-23718077)
chr2 (333-411)||(24105671-24105749)
chr2 (412-482)||(37497169-37497239)
chr2 (435-481)||(42832234-42832280)
chr2 (321-402)||(4332887-4332968)
chr2 (435-472)||(21624333-21624370)
chr2 (434-482)||(18622672-18622720)
chr2 (412-484)||(28596518-28596589)
chr2 (316-440)||(896169-896288)
chr2 (371-464)||(5367203-5367292)
chr2 (341-411)||(6249182-6249250)
chr2 (359-414)||(30563408-30563463)
chr2 (323-402)||(31284011-31284090)
chr2 (435-482)||(38117100-38117147)
chr2 (435-482)||(44860402-44860449)
chr2 (416-482)||(6180791-6180857)
chr2 (374-404)||(11439809-11439839)
chr2 (435-481)||(15657946-15657992)
chr2 (328-402)||(21782835-21782909)
chr2 (333-411)||(23406841-23406919)
chr2 (412-482)||(24009344-24009413)
chr2 (433-482)||(19980744-19980793)
chr2 (441-478)||(27460111-27460148)
[»] chr1 (53 HSPs)
chr1 (361-482)||(6936335-6936458)
chr1 (328-482)||(20157285-20157441)
chr1 (358-482)||(40747708-40747834)
chr1 (360-444)||(42004920-42005006)
chr1 (324-482)||(2896062-2896216)
chr1 (323-482)||(22794019-22794174)
chr1 (346-482)||(17831463-17831604)
chr1 (323-484)||(10577674-10577831)
chr1 (412-482)||(32899939-32900009)
chr1 (366-472)||(351029-351137)
chr1 (326-411)||(398773-398858)
chr1 (371-482)||(40258874-40258981)
chr1 (323-481)||(1486646-1486805)
chr1 (333-478)||(5898211-5898352)
chr1 (322-401)||(15641048-15641127)
chr1 (435-482)||(1704936-1704983)
chr1 (361-453)||(24176325-24176425)
chr1 (346-482)||(36878447-36878584)
chr1 (316-482)||(40917707-40917878)
chr1 (323-481)||(42359391-42359545)
chr1 (360-481)||(11412709-11412827)
chr1 (332-402)||(5376517-5376587)
chr1 (412-482)||(9828104-9828173)
chr1 (440-482)||(27965941-27965983)
chr1 (346-482)||(38075910-38076043)
chr1 (343-482)||(1815240-1815375)
chr1 (371-470)||(18190061-18190156)
chr1 (328-471)||(19562567-19562711)
chr1 (334-402)||(25452165-25452233)
chr1 (323-411)||(38503283-38503371)
chr1 (340-482)||(46348324-46348462)
chr1 (435-482)||(113364-113411)
chr1 (323-402)||(6612188-6612267)
chr1 (435-482)||(10233327-10233374)
chr1 (323-402)||(15323126-15323205)
chr1 (411-482)||(15765805-15765876)
chr1 (340-411)||(30847728-30847799)
chr1 (440-482)||(7918155-7918197)
chr1 (435-481)||(16297223-16297269)
chr1 (412-482)||(32461394-32461463)
chr1 (433-482)||(5944363-5944412)
chr1 (325-402)||(10572606-10572683)
chr1 (336-405)||(16812519-16812588)
chr1 (358-411)||(39101190-39101243)
chr1 (325-374)||(48040507-48040556)
chr1 (333-402)||(48450604-48450673)
chr1 (358-414)||(6573987-6574043)
chr1 (438-482)||(6574051-6574095)
chr1 (435-471)||(6612112-6612148)
chr1 (335-411)||(9709795-9709871)
chr1 (342-402)||(12443477-12443537)
chr1 (323-402)||(13011232-13011312)
chr1 (358-402)||(26238129-26238173)
[»] scaffold0652 (1 HSPs)
scaffold0652 (323-482)||(403-558)
[»] scaffold0007 (1 HSPs)
scaffold0007 (323-481)||(225199-225364)
[»] scaffold0306 (1 HSPs)
scaffold0306 (325-481)||(13365-13523)
[»] scaffold0152 (1 HSPs)
scaffold0152 (325-481)||(21804-21962)
[»] scaffold0003 (2 HSPs)
scaffold0003 (316-482)||(241550-241723)
scaffold0003 (417-482)||(236915-236980)
[»] scaffold0103 (1 HSPs)
scaffold0103 (340-482)||(51791-51941)
[»] scaffold0598 (1 HSPs)
scaffold0598 (340-409)||(8063-8132)
[»] scaffold0199 (1 HSPs)
scaffold0199 (359-481)||(1948-2066)
[»] scaffold0053 (1 HSPs)
scaffold0053 (323-482)||(8761-8916)
[»] scaffold0223 (1 HSPs)
scaffold0223 (325-402)||(20137-20214)
[»] scaffold0168 (1 HSPs)
scaffold0168 (322-391)||(21005-21074)
[»] scaffold0050 (1 HSPs)
scaffold0050 (341-480)||(70259-70394)
[»] scaffold0027 (1 HSPs)
scaffold0027 (323-402)||(46645-46724)
[»] scaffold0021 (1 HSPs)
scaffold0021 (323-402)||(130445-130524)
[»] scaffold0793 (1 HSPs)
scaffold0793 (428-482)||(4822-4876)
[»] scaffold0136 (1 HSPs)
scaffold0136 (335-482)||(3779-3933)
[»] scaffold0008 (1 HSPs)
scaffold0008 (323-481)||(263303-263468)
[»] scaffold0380 (1 HSPs)
scaffold0380 (435-482)||(8672-8719)
[»] scaffold0128 (1 HSPs)
scaffold0128 (435-482)||(32775-32822)
[»] scaffold0022 (1 HSPs)
scaffold0022 (346-413)||(99879-99946)
[»] scaffold0004 (1 HSPs)
scaffold0004 (343-402)||(92790-92849)
[»] scaffold0116 (1 HSPs)
scaffold0116 (323-364)||(9861-9902)


Alignment Details
Target: chr4 (Bit Score: 95; Significance: 4e-46; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 323 - 482
Target Start/End: Original strand, 24343470 - 24343631
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgt 420  Q
    |||||||||||||||| ||||||||| |||||| ||||||||||||| |||| ||||||||| ||||||||||||||||| ||||||||  |||||||||    
T  24343470 acacggacaccggacacgacacggacgccgacacgccgacacggataataatttgagaaaattacataattcagtgtaattataggtgtcgtgtcggtgt 24343569  T
Q  421 cagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    | ||||||||||| |||||||||||||||||| |||| ||  |||||||||| |||||||||    
T  24343570 ccgacaccgacgcgtgtccgacaccgggacacgcctattctgaggagtgtccgtgcttcata 24343631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 335 - 482
Target Start/End: Original strand, 7012041 - 7012196
Alignment:
Q  335 gacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--------tgtcggtgtcagaca 426  Q
    |||| |||||||||||||||| |||||||| |||| |||| ||||||||| |||||||||||||| ||||||||| |        |||||||||| ||||    
T  7012041 gacaggacacggacaccgacacgccgacaccgataataatttgagaaaatgacataattcagtgtgatcataggtatcggtgttgtgtcggtgtcggaca 7012140  T
Q  427 ccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    ||||||| | ||||||||||||  ||||||||| | |||||||||| |||||||||    
T  7012141 ccgacgcgtatccgacaccggggaacacctaatgcgaggagtgtccgtgcttcata 7012196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 316 - 479
Target Start/End: Original strand, 21945459 - 21945618
Alignment:
Q  316 ctatgaaacacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtc 415  Q
    ||||||| ||||||||||||||||||||| ||||| ||||||||||||| | || |||| ||| ||||| ||||||||||||||||| | | |   ||||    
T  21945459 ctatgaagcacggacaccggacatgacacagacactgacatgccgacacagctaataatttgaaaaaatgacataattcagtgtaattacaag---tgtc 21945555  T
Q  416 ggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttc 479  Q
    |||||| ||||  ||| ||||||||||||||  |||| |||||||| ||||||||| |||||||    
T  21945556 ggtgtcggaca-tgacacatgtccgacaccgcaacacgcctaatccgaggagtgtctatgcttc 21945618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 347 - 479
Target Start/End: Complemental strand, 20743350 - 20743210
Alignment:
Q  347 acaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--------tgtcggtgtcagacaccgacgcatgtc 438  Q
    |||| |||| ||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||        ||||| |||||||||||||| | ||||    
T  20743350 acactgacacgccgacacggataataatttgagaaaatgacataattcagtgtaatcataggtgttgtgtcggtgtcgatgtcagacaccgacacgtgtc 20743251  T
Q  439 cgacaccgggacacacctaatccaaggagtgtccatgcttc 479  Q
    ||||||||| ||||| ||||||| | |||||||| ||||||    
T  20743250 cgacaccggaacacatctaatccgatgagtgtccgtgcttc 20743210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 323 - 482
Target Start/End: Complemental strand, 23293082 - 23292927
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtca 422  Q
    |||||||||||||||| ||||||||||  |||| |||||||| | || |||| ||| ||||| |||||||||||| |||| | | |   ||||||||||     
T  23293082 acacggacaccggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtataattacaag---tgtcggtgtcg 23292986  T
Q  423 gacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||| |||| | |||||||||||||||||| |||||||| |||||||||| |||||||||    
T  23292985 gaca-cgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcata 23292927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 327 - 467
Target Start/End: Complemental strand, 20521941 - 20521801
Alignment:
Q  327 ggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagaca 426  Q
    ||||||| |||| ||||||||||| |||| ||||| || |||| |||| ||| ||||| |||||||||| || ||||||  ||  |||||||||| ||||    
T  20521941 ggacaccagacacgacacggacactgacacgccgataccgataataatttgataaaatcacataattcaatgaaatcatgtgtcgtgtcggtgtcggaca 20521842  T
Q  427 ccgacgcatgtccgacaccgggacacacctaatccaaggag 467  Q
    ||||||||||||||| |||  ||||| ||||||||||||||    
T  20521841 ccgacgcatgtccgaaaccatgacacgcctaatccaaggag 20521801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 323 - 482
Target Start/End: Original strand, 11931243 - 11931409
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--------tgt 414  Q
    |||||||||| |||||  |||||||||  | ||||||||||| | || |||||||| ||||| |||||||| |||||||  ||| ||||        |||    
T  11931243 acacggacactggacactacacggacaatgccatgccgacaccgttaataatatgaaaaaatcacataatttagtgtaaatatatgtgtcgatgtcatgt 11931342  T
Q  415 cggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||| || ||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||    
T  11931343 cggtatc-gacaccgacgcatgtccgacaccaggacacacctaatccatggagtgtccgtgcttcata 11931409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 361 - 482
Target Start/End: Complemental strand, 3144710 - 3144588
Alignment:
Q  361 acacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaa 458  Q
    ||||||||| |||| | ||||||| | |||||| |||||||||||||||||  ||||||||||||||||| |||| ||||| ||| || |||||||||||    
T  3144710 acacggataataatttcagaaaatgatataatttagtgtaatcataggtgtcgtgtcggtgtcagacaccaacgcgtgtccaaca-cgagacacacctaa 3144612  T
Q  459 tccaaggagtgtccatgcttcata 482  Q
    ||| || ||||||| |||||||||    
T  3144611 tccgagaagtgtccgtgcttcata 3144588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 390 - 482
Target Start/End: Complemental strand, 53381625 - 53381531
Alignment:
Q  390 aattcagtgtaatcataggtgt--tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    ||||||||||||| ||||| ||  |||||||||| ||||| ||||| | ||||||||||||||||||||||||| |||||||||| |||||||||    
T  53381625 aattcagtgtaattataggcgtcgtgtcggtgtcggacactgacgcgtatccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 53381531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 21 - 139
Target Start/End: Original strand, 56537871 - 56537989
Alignment:
Q  21 aatgctttggctgctttggaagctattgattcagatgttgctgatgaagttatgagagttggttgtattactggtgatagaattaatggccttgttgatg 120  Q
    ||||||||||||||||||||||| || |||   ||||||||||| ||||||||  |||||||||| || || ||||||||||| || || ||||| || |    
T  56537871 aatgctttggctgctttggaagcaatagatatggatgttgctgaagaagttattggagttggttgcatcacaggtgatagaatcaaagggcttgtggacg 56537970  T
Q  121 gagtttctggttcttggta 139  Q
    |||||||||| ||||||||    
T  56537971 gagtttctgggtcttggta 56537989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 417 - 482
Target Start/End: Original strand, 17876219 - 17876284
Alignment:
Q  417 gtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||  |||||||||    
T  17876219 gtgtcagacaccgacgcttgtccgacaccaggacacacctaatccaaggagtgtctgtgcttcata 17876284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 317 - 407
Target Start/End: Complemental strand, 16402313 - 16402223
Alignment:
Q  317 tatgaaacacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcatag 407  Q
    |||||| ||||||||||| ||| |||| | |||| |||||||||||||||||| |||| |||||||||||||| || ||||||||| ||||    
T  16402313 tatgaagcacggacaccgcacacgacatgaacactgacatgccgacacggataataatttgagaaaataacatgatacagtgtaattatag 16402223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 342 - 474
Target Start/End: Original strand, 32910533 - 32910673
Alignment:
Q  342 cacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgtc------agacaccgacgc 433  Q
    |||| |||||||||| |||||||||||| |||| ||||||||| ||||||||||||||||| || |||||  ||||||| ||       ||||| |||||    
T  32910533 cacgaacaccgacataccgacacggataataatttgagaaaatgacataattcagtgtaattatgggtgttatgtcggtatcggtattggacactgacgc 32910632  T
Q  434 atgtccgacaccgggacacacctaatccaaggagtgtccat 474  Q
     |||||||||||  ||||| |||||||| ||||||||||||    
T  32910633 gtgtccgacaccatgacacgcctaatccgaggagtgtccat 32910673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 345 - 482
Target Start/End: Original strand, 40783942 - 40784071
Alignment:
Q  345 ggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacac 444  Q
    ||||||||||||| |||| | |||| |||| ||||| ||||||||||||||| ||||||||| |||||   |||||| || ||| |||  |||  |||||    
T  40783942 ggacaccgacatgtcgacgccgataataatttgagataataacataattcagcgtaatcatatgtgtt---ggtgtc-gataccaacg--tgt--gacac 40784033  T
Q  445 cgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    ||||||||||||||||| |||||||||| |||||||||    
T  40784034 cgggacacacctaatccgaggagtgtccgtgcttcata 40784071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 323 - 482
Target Start/End: Original strand, 36635287 - 36635448
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgtt---gtcggtg 419  Q
    |||| ||||||||||| ||| ||||||| |||| ||| ||||   || |||| ||||||||| ||||||||||||||||| ||| |||||   ||  |||    
T  36635287 acacagacaccggacacgactcggacactgacacgccaacaccactaataatttgagaaaatcacataattcagtgtaattatatgtgttcgtgtgagtg 36635386  T
Q  420 tcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||||||| ||| |  ||| ||||||||||||| |||||||| | |||||||| |||||||||    
T  36635387 tcagacac-gacacgcgtcagacaccgggacacgcctaatccgaagagtgtccgtgcttcata 36635448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 360 - 482
Target Start/End: Complemental strand, 18513300 - 18513176
Alignment:
Q  360 gacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt---tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacct 456  Q
    ||||| |||| |||| ||||||||| |||||||||| |||||||||| ||||   ||| | |||| ||||||||||  ||||||||||| |||||| |||    
T  18513300 gacaccgataataatttgagaaaatgacataattcaatgtaatcatatgtgtcagtgttg-tgtcggacaccgacgtgtgtccgacaccaggacacgcct 18513202  T
Q  457 aatccaaggagtgtccatgcttcata 482  Q
    ||||  |||||||||| |||||||||    
T  18513201 aatctgaggagtgtccgtgcttcata 18513176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 366 - 482
Target Start/End: Complemental strand, 19230362 - 19230242
Alignment:
Q  366 gatattaatatgagaaaataacataattcagtgtaatcataggtgt----tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatcc 461  Q
    |||| |||| |||||||||||||||||||| |||||| ||||||||    |||||||||||||||| || || ||| ||||| | ||||||| |||||||    
T  19230362 gataataatttgagaaaataacataattcaatgtaattataggtgtcgtgtgtcggtgtcagacacggatgcgtgttcgacaacaggacacatctaatcc 19230263  T
Q  462 aaggagtgtccatgcttcata 482  Q
     | |||||||| | |||||||    
T  19230262 gaagagtgtccgtacttcata 19230242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 341 - 482
Target Start/End: Complemental strand, 3947844 - 3947702
Alignment:
Q  341 acacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt---tgtcggtgtcagacaccgacgcatgt 437  Q
    |||| ||||| ||||||||||||| | || |||| ||| |||||  |||||||||||||||| | | ||||   ||||| |||| ||||| ||| | |||    
T  3947844 acacagacacggacatgccgacacagctaataatttgaaaaaatcgcataattcagtgtaattacaagtgtcagtgtcg-tgtcggacac-gacacgtgt 3947747  T
Q  438 ccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||||||| ||||||||||||||| |||||||||| |||||||||    
T  3947746 ccgacaccaggacacacctaatccgaggagtgtccgtgcttcata 3947702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 412 - 482
Target Start/End: Complemental strand, 30982877 - 30982808
Alignment:
Q  412 tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||||||||||||||| ||| | |||||||||||||||||| |||||||||| |||||||| |||||||||    
T  30982877 tgtcggtgtcagacac-gacacgtgtccgacaccgggacacgcctaatccaaagagtgtccgtgcttcata 30982808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 323 - 460
Target Start/End: Complemental strand, 944761 - 944625
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgt 420  Q
    |||| ||| ||||||| |||||  ||||||||| |||||||| ||||   || ||||| ||| ||  |||| |||||||| ||||||||  |||| ||||    
T  944761 acacagacgccggacacgacacaaacaccgacacgccgacaccgata---atttgagataatgacgcaatttagtgtaattataggtgtcgtgtcagtgt 944665  T
Q  421 cagacaccgacgcatgtccgacaccgggacacacctaatc 460  Q
    |  |||| ||||| ||||||||||||||||||||||||||    
T  944664 cgaacacagacgcgtgtccgacaccgggacacacctaatc 944625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 10133757 - 10133827
Alignment:
Q  412 tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||||||||||||||| ||||| ||||||||||| ||||||||||||||  ||||  || |||||||||||    
T  10133757 tgtcggtgtcagacactgacgcgtgtccgacaccaggacacacctaatctgaggaacgttcatgcttcata 10133827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 371 - 482
Target Start/End: Complemental strand, 28964296 - 28964189
Alignment:
Q  371 taatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgt 470  Q
    |||| ||| ||||| ||||||||||||||||| | | ||||   | ||||| ||||| ||| ||| |||||||| ||||||| |||||||| ||||||||    
T  28964296 taatttgaaaaaatcacataattcagtgtaattacaagtgt---ctgtgtcggacac-gacacatatccgacactgggacacgcctaatccgaggagtgt 28964201  T
Q  471 ccatgcttcata 482  Q
    ||||||||||||    
T  28964200 ccatgcttcata 28964189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 323 - 482
Target Start/End: Complemental strand, 35158081 - 35157926
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtca 422  Q
    ||||||||||||||||  |||||||||| |||| |||||| |   || |||| ||  ||||| |||||||| |||||||| ||| |   ||||||||||     
T  35158081 acacggacaccggacacaacacggacactgacacgccgacgcaactaataatttggaaaaatcacataatttagtgtaattataag---tgtcggtgtct 35157985  T
Q  423 gacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||| |||| ||||||| ||||||| |||| | |||||| || ||||||| |||||||||    
T  35157984 gaca-cgacacatgtccaacaccggaacacgcttaatccgagaagtgtccgtgcttcata 35157926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 316 - 478
Target Start/End: Original strand, 49430982 - 49431140
Alignment:
Q  316 ctatgaaacacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaa-taacataattcagtgtaatcataggtgttgt 414  Q
    ||||||| ||||||||| ||||| ||| ||||||  |||| |||||||| | || |||| ||| |||| | ||||||||||||||||| | | |   |||    
T  49430982 ctatgaagcacggacac-ggacacgactcggacagtgacacgccgacacagctaataatttgaaaaaaatcacataattcagtgtaattaaaag---tgt 49431077  T
Q  415 cggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgctt 478  Q
    ||||||| |||| |||| | ||||| |||||||||||| ||| |||| ||||||||||||||||    
T  49431078 cggtgtcggaca-cgacacgtgtccaacaccgggacacgccttatccgaggagtgtccatgctt 49431140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 371 - 459
Target Start/End: Complemental strand, 31243596 - 31243500
Alignment:
Q  371 taatatgagaaaataacataattcagtgtaatcataggtgt--------tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaat 459  Q
    |||| ||||||||| ||||||||||||||||||||||||||        ||| |||||| |||||||| || ||| ||||||| |||||||||||||    
T  31243596 taatttgagaaaatgacataattcagtgtaatcataggtgtcatgtcggtgttggtgtcggacaccgatgcgtgttcgacaccaggacacacctaat 31243500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 428 - 482
Target Start/End: Complemental strand, 715600 - 715546
Alignment:
Q  428 cgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||| |||||||||||| ||||||| |||||||| |||||||||| |||||||||    
T  715600 cgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 715546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 428 - 482
Target Start/End: Complemental strand, 752926 - 752872
Alignment:
Q  428 cgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||| |||||||||||| ||||||| |||||||| |||||||||| |||||||||    
T  752926 cgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 752872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 440 - 482
Target Start/End: Complemental strand, 25950515 - 25950473
Alignment:
Q  440 gacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    ||||||| |||||||||||||| ||||||||||||||||||||    
T  25950515 gacaccgagacacacctaatccgaggagtgtccatgcttcata 25950473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 413
Target Start/End: Complemental strand, 46180984 - 46180942
Alignment:
Q  371 taatatgagaaaataacataattcagtgtaatcataggtgttg 413  Q
    |||| ||||||||||||||||||||||||||||||| ||||||    
T  46180984 taatttgagaaaataacataattcagtgtaatcatatgtgttg 46180942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 441 - 482
Target Start/End: Original strand, 848039 - 848080
Alignment:
Q  441 acaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||||||||||||||||||||||||||||||| || ||||||    
T  848039 acaccgggacacacctaatccaaggagtgtccgtgtttcata 848080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 327 - 482
Target Start/End: Complemental strand, 5414264 - 5414102
Alignment:
Q  327 ggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcata------ggtgt--tgtcggt 418  Q
    |||||||||||| ||||||||||| |||| |||||||| | || |  | | ||||||| ||| ||| ||||||||| |||      |||||  |||| ||    
T  5414264 ggacaccggacacgacacggacacggacacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtatcggtgtcgtgtcagt 5414165  T
Q  419 gtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    ||| ||||| ||| | |||| ||||| ||||||||||| ||||||||||||||| |||||||||    
T  5414164 gtcggacac-gacacgtgtctgacacagggacacaccttatccaaggagtgtccgtgcttcata 5414102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 435 - 482
Target Start/End: Original strand, 19482750 - 19482797
Alignment:
Q  435 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||||||||| |||||||||||||||| |||||||| | |||||||||    
T  19482750 tgtccgacactgggacacacctaatccgaggagtgttcgtgcttcata 19482797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 435 - 481
Target Start/End: Original strand, 7424729 - 7424774
Alignment:
Q  435 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttcat 481  Q
    ||||||||||||  |||| ||||||||||||||||||||||||||||    
T  7424729 tgtccgacaccgt-acacgcctaatccaaggagtgtccatgcttcat 7424774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 16073443 - 16073512
Alignment:
Q  412 tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||||||||| ||||| ||  ||||||||||||   ||||| |||||||| ||||||||||||||||||||    
T  16073443 tgtcggtgtcggacac-gatacatgtccgacactaagacacgcctaatccgaggagtgtccatgcttcata 16073512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 428 - 482
Target Start/End: Original strand, 29205532 - 29205586
Alignment:
Q  428 cgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||| |||||||||||| ||||||| |||||||| |||||||| | |||||||||    
T  29205532 cgacacatgtccgacactgggacacgcctaatccgaggagtgttcgtgcttcata 29205586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 341 - 411
Target Start/End: Complemental strand, 34515952 - 34515882
Alignment:
Q  341 acacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 411  Q
    ||||| |||| |||| | ||||||||||| ||||   ||||||| |||||||||||||||| |||||||||    
T  34515952 acacgaacactgacacgtcgacacggataataattcaagaaaatgacataattcagtgtaaacataggtgt 34515882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 481
Target Start/End: Original strand, 4157198 - 4157266
Alignment:
Q  412 tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcat 481  Q
    |||||||||| ||||| ||| |||||||||||||| || ||||||||| | |||||||||  ||||||||    
T  4157198 tgtcggtgtcggacac-gacacatgtccgacaccgagaaacacctaattcgaggagtgtctgtgcttcat 4157266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 481
Target Start/End: Original strand, 4157485 - 4157553
Alignment:
Q  412 tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcat 481  Q
    |||||||||| ||||| ||| |||||||||||||| || || |||||| | ||||||||| |||||||||    
T  4157485 tgtcggtgtcggacac-gacacatgtccgacaccgagaaacgcctaattcgaggagtgtctatgcttcat 4157553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 402
Target Start/End: Complemental strand, 44797040 - 44796979
Alignment:
Q  341 acacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 402  Q
    |||||||||| |||||| | |||| || | |||| |||||||||||||||||||| ||||||    
T  44797040 acacggacacagacatgtcaacaccgacaataatttgagaaaataacataattcaatgtaat 44796979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 412 - 444
Target Start/End: Original strand, 6274004 - 6274036
Alignment:
Q  412 tgtcggtgtcagacaccgacgcatgtccgacac 444  Q
    ||||||||||||||| |||||||||||||||||    
T  6274004 tgtcggtgtcagacatcgacgcatgtccgacac 6274036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 430 - 482
Target Start/End: Complemental strand, 34200270 - 34200218
Alignment:
Q  430 acgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||| |||| |||||||  |||||| |||||||||||||||| ||||||||||    
T  34200270 acgcgtgtctgacaccgaaacacacttaatccaaggagtgtctatgcttcata 34200218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 74; Significance: 1e-33; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 360 - 482
Target Start/End: Original strand, 34446565 - 34446689
Alignment:
Q  360 gacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgtcagacaccgacgcatgtccgacaccgggacacaccta 457  Q
    |||||||||| |||| ||||||||| ||||||||||||||||||||||||||  ||||||||||  |||||||||| | || ||||| ||||||||||||    
T  34446565 gacacggataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtccaacaccgacgcgtatctgacactgggacacaccta 34446664  T
Q  458 atccaaggagtgtccatgcttcata 482  Q
    ||||||||||||||| |||||||||    
T  34446665 atccaaggagtgtccgtgcttcata 34446689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 315 - 482
Target Start/End: Original strand, 34595089 - 34595252
Alignment:
Q  315 gctatgaaacacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgt 414  Q
    |||||||| ||||||||||||||| ||||||||||  |||| ||||||||   || |||| ||| ||||| ||||||||||||||||| | | |   |||    
T  34595089 gctatgaagcacggacaccggacacgacacggacaatgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaag---tgt 34595185  T
Q  415 cggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    ||||||| |||| |||| | |||| |||||||||||||||||||||| |||||||||| |||||||||    
T  34595186 cggtgtcggaca-cgacacgtgtctgacaccgggacacacctaatccgaggagtgtccgtgcttcata 34595252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 360 - 480
Target Start/End: Complemental strand, 12235578 - 12235462
Alignment:
Q  360 gacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaat 459  Q
    |||||||||| ||||  |||||||| ||||||||||||||||||||||||||     ||||| ||||||||||  |||||| ||||||||||| ||||||    
T  12235578 gacacggataataattagagaaaatgacataattcagtgtaatcataggtgt----cgtgtccgacaccgacgtgtgtccggcaccgggacacccctaat 12235483  T
Q  460 ccaaggagtgtccatgcttca 480  Q
    ||||  ||||||| |||||||    
T  12235482 ccaaaaagtgtccgtgcttca 12235462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 323 - 411
Target Start/End: Original strand, 6389706 - 6389794
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 411  Q
    |||| ||||||||||| |||||||||||  ||| ||||||||||||| |||| ||||||||| | |||||| |||||||||||||||||    
T  6389706 acacagacaccggacacgacacggacactcacacgccgacacggataataatttgagaaaatgatataatttagtgtaatcataggtgt 6389794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 323 - 482
Target Start/End: Complemental strand, 8777069 - 8776909
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtca 422  Q
    ||||||||| |||||| ||||||||||| |||| ||||||||   || |||| ||| ||||| ||| ||||||||||||| | | ||||||   |||||     
T  8777069 acacggacaacggacacgacacggacactgacacgccgacacaactaataatttgaaaaaatcacaaaattcagtgtaattacaagtgttg---gtgtcg 8776973  T
Q  423 gacac----cgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||||    |||| | |||||||||||| |||||||||||||| |||||||||| |||||||||    
T  8776972 gacacgacacgacacgtgtccgacaccgagacacacctaatccgaggagtgtccgtgcttcata 8776909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 321 - 411
Target Start/End: Complemental strand, 2153985 - 2153895
Alignment:
Q  321 aaacacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 411  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||| | | |||| | ||||||| | |||||| |||||||| ||||||||    
T  2153985 aaacacggacatcggacatgacacggacaccgacacgccgacacgaacaataatttaagaaaatgatataatttagtgtaattataggtgt 2153895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 323 - 482
Target Start/End: Complemental strand, 9107466 - 9107300
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--------tgt 414  Q
    |||||||||||||||| |||||||||||  ||| |||||||| | || |||| ||| ||||| ||| ||||||||||||| | | ||||        |||    
T  9107466 acacggacaccggacacgacacggacactaacacgccgacacagctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcgtgt 9107367  T
Q  415 cggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    ||||||| |||||  |||  ||||||||||||||||||||||||||| ||||||| || |||||||||    
T  9107366 cggtgtcggacaca-acgtgtgtccgacaccgggacacacctaatccgaggagtgcccgtgcttcata 9107300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 335 - 482
Target Start/End: Original strand, 9658854 - 9658998
Alignment:
Q  335 gacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgca 434  Q
    |||| ||||||||||| |||| |||||||| | || |||| | ||||||| ||||||||||||||||| |||    |||||||||| ||||| |||| |     
T  9658854 gacacgacacggacactgacacgccgacaccgctaataatttaagaaaatcacataattcagtgtaattata---tttgtcggtgttagaca-cgacacg 9658949  T
Q  435 tgtccgacaccgggacacacctaa-tccaaggagtgtccatgcttcata 482  Q
    |||| |||||||| |||| ||||| |||||||||||||| |||||||||    
T  9658950 tgtctgacaccggaacacgcctaattccaaggagtgtccgtgcttcata 9658998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 333 - 481
Target Start/End: Original strand, 12696297 - 12696446
Alignment:
Q  333 cggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt---tgtcggtgtcagacaccg 429  Q
    |||||| ||||||||||| |||| |||||||| | || |||| ||| ||||| ||||||||||||||||| | | ||||   |||| ||||| |||| ||    
T  12696297 cggacacgacacggacactgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtcagtgtc-gtgtcggaca-cg 12696394  T
Q  430 acgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcat 481  Q
    || | |||| ||||||||||||||||| ||||||||||||||  ||||||||    
T  12696395 acacgtgtctgacaccgggacacaccttatccaaggagtgtctgtgcttcat 12696446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 323 - 482
Target Start/End: Original strand, 16766660 - 16766826
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--------tgt 414  Q
    |||||||||||||||| |||| |||||| |||| |||||||| | || |||| ||| ||||| ||||||||||||||||| | | ||||        |||    
T  16766660 acacggacaccggacacgacatggacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgt 16766759  T
Q  415 cggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    ||||||| |||| | || | |||||||||||||||||| |||||||| | || ||||| |||||||||    
T  16766760 cggtgtcggaca-caacacgtgtccgacaccgggacacgcctaatccgaagaatgtccgtgcttcata 16766826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 321 - 482
Target Start/End: Complemental strand, 17168561 - 17168398
Alignment:
Q  321 aaacacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggt 418  Q
    ||||||||| | |||||||||||  ||||| |||| ||| |||| |||| |||| ||||||||| | |||||| |||||||| ||||||||  |||||||    
T  17168561 aaacacggaaatcggacatgacatagacactgacacgccaacactgataataatttgagaaaatgatataatttagtgtaataataggtgtcgtgtcggt 17168462  T
Q  419 gtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    ||| ||||| ||| | ||||  ||||  |||||| ||||||||  ||| ||| | |||||||||    
T  17168461 gtcggacactgacacgtgtctaacactaggacacccctaatccgtggaatgtacttgcttcata 17168398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 412 - 480
Target Start/End: Complemental strand, 32978909 - 32978842
Alignment:
Q  412 tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttca 480  Q
    |||||||||| ||||| ||| ||||||||||||||||||||  |||||||||||||||||| |||||||    
T  32978909 tgtcggtgtcggacac-gacacatgtccgacaccgggacacgtctaatccaaggagtgtccgtgcttca 32978842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 482
Target Start/End: Complemental strand, 10339218 - 10339055
Alignment:
Q  327 ggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgt-aatcataggtgt--------tgtcgg 417  Q
    |||||| ||||| |||| | |||| |||| |||||||| |  |||||| ||||||||| |||||||||||||| ||| ||| ||||        ||||||    
T  10339218 ggacacaggacacgacatgaacactgacacgccgacaccgcgattaatttgagaaaatcacataattcagtgttaattatatgtgtcagtgccgtgtcgg 10339119  T
Q  418 tgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||| ||||| ||| |||||||||||| ||||||| |||||||  |||||||||| |||||||||    
T  10339118 tgtcggacac-gacacatgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcata 10339055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 435 - 482
Target Start/End: Original strand, 31959221 - 31959268
Alignment:
Q  435 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||    
T  31959221 tgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 31959268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 18367896 - 18367965
Alignment:
Q  412 tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||||||||||||||| ||| |||||| ||||| ||||||| ||| ||||||||||||||| |||||||||    
T  18367896 tgtcggtgtcagacac-gacacatgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 18367965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 325 - 411
Target Start/End: Complemental strand, 30866238 - 30866152
Alignment:
Q  325 acggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 411  Q
    |||||||||||||||||||| ||||||||||  || |||| | || |||| ||||||||| |||||||||| |||||| ||| ||||    
T  30866238 acggacaccggacatgacactgacaccgacacaccaacaccgctaataatttgagaaaatcacataattcaatgtaattatatgtgt 30866152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 316 - 402
Target Start/End: Complemental strand, 34073450 - 34073364
Alignment:
Q  316 ctatgaaacacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 402  Q
    ||||||| ||||||||| ||||| ||||||||||| |||||||| |||  | || |||| |||||||||  ||||||||||||||||    
T  34073450 ctatgaagcacggacactggacacgacacggacactgacatgccaacatcgctaataatttgagaaaatctcataattcagtgtaat 34073364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 376 - 482
Target Start/End: Complemental strand, 4420222 - 4420121
Alignment:
Q  376 tgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatg 475  Q
    ||||||||| | |||||||||||||| ||||||||||   ||||||||||||| |||  |||| |||||| ||  |||||||||   |||||||||||||    
T  4420222 tgagaaaatgatataattcagtgtaaccataggtgtt---ggtgtcagacaccaacgtgtgtctgacaccagg--acacctaatattaggagtgtccatg 4420128  T
Q  476 cttcata 482  Q
    |||||||    
T  4420127 cttcata 4420121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 323 - 408
Target Start/End: Original strand, 7625085 - 7625170
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcatagg 408  Q
    ||||||||| |||||| ||||| |||||||||| | ||||||||||| |||| ||||||||| | |||||| ||| |||| |||||    
T  7625085 acacggacatcggacacgacacagacaccgacacgtcgacacggataataatttgagaaaatgatataatttagtataattatagg 7625170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 435 - 480
Target Start/End: Complemental strand, 8389456 - 8389411
Alignment:
Q  435 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttca 480  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||    
T  8389456 tgtccgacaccgggacacacctaatccgaggagtgtccgtgcttca 8389411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 323 - 411
Target Start/End: Original strand, 9027141 - 9027229
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 411  Q
    |||||||| ||||||| ||||||||||| |||| |||||||| | || |||| ||||| ||| ||||||||| ||||||| ||| ||||    
T  9027141 acacggactccggacacgacacggacactgacacgccgacaccgctaataatttgagataatcacataattccgtgtaattatatgtgt 9027229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 482
Target Start/End: Complemental strand, 13360467 - 13360314
Alignment:
Q  324 cacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcag 423  Q
    ||||||||| ||||| || ||| |||| |||| | ||||||   || |||| ||||||||| ||||||||||||||||| |||  |||| ||||||||||    
T  13360467 cacggacactggacacgatacgaacacagacacgtcgacaccactagtaatttgagaaaatcacataattcagtgtaattata--tgtt-tcggtgtcag 13360371  T
Q  424 acaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    ||||  |   ||||||||||| | ||||| |||||||| | |||||||| |||||||||    
T  13360370 acac--aacaatgtccgacactgagacacgcctaatccgaagagtgtccgtgcttcata 13360314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 482
Target Start/End: Original strand, 28152079 - 28152216
Alignment:
Q  340 gacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtcc 439  Q
    ||||||||||| |||| |||||||  | || |||| ||| ||||| ||||||||||||||||| | | |   |||||||||| |||| |||| | |||||    
T  28152079 gacacggacactgacacgccgacaaagctaataatttga-aaaatcacataattcagtgtaattacaag---tgtcggtgtcggaca-cgacacgtgtcc 28152173  T
Q  440 gacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    ||||||||||||  |||||||| |||||||| | |||||||||    
T  28152174 gacaccgggacaggcctaatccgaggagtgttcgtgcttcata 28152216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 340 - 485
Target Start/End: Complemental strand, 17841668 - 17841527
Alignment:
Q  340 gacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtcc 439  Q
    ||||||||||| |||| |||||||| | || |||| ||| ||||| |||||||| |||||||| | | |||    ||||||| ||||| |||   |||||    
T  17841668 gacacggacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtga---cggtgtcggacac-gacatgtgtcc 17841573  T
Q  440 gacaccgggacacacctaatccaaggagtgtccatgcttcatactc 485  Q
    ||||| | ||||| |||||||| |||||||||| ||||||||||||    
T  17841572 gacactgagacacgcctaatccgaggagtgtccgtgcttcatactc 17841527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 387 - 483
Target Start/End: Original strand, 24807066 - 24807163
Alignment:
Q  387 cataattcagtgtaatcataggtgt--tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcatac 483  Q
    ||||||||||| |||||||||||||  |||| || ||| ||||| | ||||||||||| | ||| |||||||||||| |||||||||  ||||||||||    
T  24807066 cataattcagtctaatcataggtgtcgtgtcagtatca-acaccaatgcatgtccgacgctggggcacacctaatccgaggagtgtcagtgcttcatac 24807163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 435 - 482
Target Start/End: Original strand, 31385001 - 31385048
Alignment:
Q  435 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    ||||| |||||||||||| ||||||||||||||||||| |||||||||    
T  31385001 tgtcctacaccgggacacgcctaatccaaggagtgtccgtgcttcata 31385048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 336 - 402
Target Start/End: Complemental strand, 7996461 - 7996395
Alignment:
Q  336 acatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 402  Q
    |||||||| |||||| ||||||||||||| | || |||| ||||||||| | |||||||||||||||    
T  7996461 acatgacaaggacactgacatgccgacactgctaataatttgagaaaatcatataattcagtgtaat 7996395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 336 - 402
Target Start/End: Original strand, 8022340 - 8022406
Alignment:
Q  336 acatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 402  Q
    |||||||| |||||| ||||||||||||| | || |||| ||||||||| | |||||||||||||||    
T  8022340 acatgacaaggacactgacatgccgacactgctaataatttgagaaaatcatataattcagtgtaat 8022406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 32313464 - 32313534
Alignment:
Q  412 tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||||||||||||||| |||| |||||| |||||||||||||| ||| || || | ||||| |||||||||    
T  32313464 tgtcggtgtcagacactgacgtatgtccaacaccgggacacacttaacccgagaaatgtccgtgcttcata 32313534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 323 - 430
Target Start/End: Original strand, 7938079 - 7938183
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtca 422  Q
    |||||||||||||||| |||| |||||| |||| |||||||| | || |||| ||| ||||| | |||||| |||||||| ||| |   ||||||||||     
T  7938079 acacggacaccggacacgacatggacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattataag---tgtcggtgtcc 7938175  T
Q  423 gacaccga 430  Q
    ||||||||    
T  7938176 gacaccga 7938183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 323 - 482
Target Start/End: Complemental strand, 7977926 - 7977771
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtca 422  Q
    |||||||||| ||||| |||| ||| || |||| |||||||| | || |||| ||| ||||| ||||||||||||||||| | | |   ||||||||||     
T  7977926 acacggacactggacacgacatggatactgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaag---tgtcggtgtcg 7977830  T
Q  423 gacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||| | ||  |||||||||| ||  |||| ||||||| ||||||||| | |||||||||    
T  7977829 gaca-caacatatgtccgacaacgaaacacgcctaatctaaggagtgttcgtgcttcata 7977771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 346 - 411
Target Start/End: Complemental strand, 12086418 - 12086353
Alignment:
Q  346 gacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 411  Q
    |||||| ||| | ||||||||||| |||| ||||| ||| |||||||||||| |||||||||||||    
T  12086418 gacacctacacgtcgacacggataataatttgagataatgacataattcagtttaatcataggtgt 12086353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 361 - 413
Target Start/End: Complemental strand, 7569226 - 7569174
Alignment:
Q  361 acacggatattaatatgagaaaataacataattcagtgtaatcataggtgttg 413  Q
    |||| |||| |||| ||||||||| ||||||||||||||||| ||||||||||    
T  7569226 acacagataataatttgagaaaattacataattcagtgtaattataggtgttg 7569174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 323 - 411
Target Start/End: Original strand, 13851699 - 13851787
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 411  Q
    |||||||||  | ||| ||||||||||| |||| | |||||| | || |||| |||||||||||| |||||||||||||| ||| ||||    
T  13851699 acacggacattgaacacgacacggacactgacacgtcgacaccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgt 13851787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 402
Target Start/End: Complemental strand, 426610 - 426531
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 402  Q
    ||||||| |||||||| ||||||||||| |||| |||||||| | || |||| ||| ||||| |||||||| | ||||||    
T  426610 acacggataccggacacgacacggacactgacacgccgacacagttaataatttgaaaaaatcacataattaaatgtaat 426531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 402
Target Start/End: Complemental strand, 5000722 - 5000643
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 402  Q
    ||||||||||||||||||||||||| || |||| | |||||| | || ||||  |||||||| |||| ||||||| ||||    
T  5000722 acacggacaccggacatgacacggatactgacacgtcgacaccgctaataattcgagaaaatcacatgattcagtataat 5000643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 402
Target Start/End: Complemental strand, 21395403 - 21395325
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 402  Q
    |||| ||||||||| |||||| ||||||||||| ||| |||| | || |||| ||||||||| |||||||| ||||||||    
T  21395403 acacagacaccggatatgacatggacaccgacacgccaacaccgctaataatttgagaaaat-acataatttagtgtaat 21395325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 378 - 482
Target Start/End: Original strand, 12236676 - 12236777
Alignment:
Q  378 agaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgct 477  Q
    |||||||||||||||||| ||||||| || ||||   || ||| | |||||||| ||||| || ||||||||||| ||||| |  |||||||| | ||||    
T  12236676 agaaaataacataattcaatgtaatcgtatgtgt---cgatgttaaacaccgacacatgttcggcaccgggacacgcctaacctgaggagtgttcgtgct 12236772  T
Q  478 tcata 482  Q
    |||||    
T  12236773 tcata 12236777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 363 - 482
Target Start/End: Original strand, 26247429 - 26247549
Alignment:
Q  363 acggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatc 460  Q
    ||||||| |||| | ||||||| ||||| || ||| ||||||||||| |  |||||||||| |||||| || | |||| |||||| | ||||||||||||    
T  26247429 acggataataatttaagaaaatgacatattttagtataatcataggtttcgtgtcggtgtcggacaccaacacgtgtctgacacc-gaacacacctaatc 26247527  T
Q  461 caaggagtgtccatgcttcata 482  Q
      |||||||||| || ||||||    
T  26247528 tgaggagtgtccgtgtttcata 26247549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 435 - 480
Target Start/End: Complemental strand, 9025493 - 9025448
Alignment:
Q  435 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttca 480  Q
    |||||||||||||||||| |||||||| || ||||||| |||||||    
T  9025493 tgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttca 9025448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 19602239 - 19602186
Alignment:
Q  361 acacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgt 414  Q
    |||| |||| |||| ||||||||| | |||||||||||||||||||||| ||||    
T  19602239 acactgataataatttgagaaaatgatataattcagtgtaatcataggtattgt 19602186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 371 - 461
Target Start/End: Complemental strand, 12627625 - 12627539
Alignment:
Q  371 taatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatcc 461  Q
    |||| ||| ||||| ||||||||||||||||| ||| ||||   || |||| |||||| || |||||||||||||| ||||| ||||||||    
T  12627625 taatgtgaaaaaatcacataattcagtgtaataatatgtgt---cgatgtcggacacc-acacatgtccgacaccgagacactcctaatcc 12627539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 359 - 477
Target Start/End: Complemental strand, 12627876 - 12627761
Alignment:
Q  359 cgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaa 458  Q
    ||||||||||| |||| | ||||||||||||| |||| ||||||||||     ||||| |||| |||||| || |||||| || || ||||||  |||||    
T  12627876 cgacacggatactaatttaagaaaataacatatttcaatgtaatcata---tatgtcgatgtctgacaccaacacatgtctgaaactgggacatgcctaa 12627780  T
Q  459 tccaaggagtgtccatgct 477  Q
    |   |||||||||||||||    
T  12627779 taagaggagtgtccatgct 12627761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 317 - 393
Target Start/End: Complemental strand, 13211383 - 13211307
Alignment:
Q  317 tatgaaacacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataatt 393  Q
    |||||| ||||||||| |||||  ||| ||||||||||| | |||||  |||| |||| ||||||||| ||||||||    
T  13211383 tatgaagcacggacacgggacaccacaaggacaccgacacgtcgacattgataataatttgagaaaatgacataatt 13211307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 360 - 482
Target Start/End: Original strand, 28715295 - 28715413
Alignment:
Q  360 gacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaat 459  Q
    ||||||| || |||| ||| ||||| ||||||||||||||||| | | |   |||||||||| |||| |||| | ||| |||||||||||||| ||||||    
T  28715295 gacacggctaataatttgaaaaaatgacataattcagtgtaattacaag---tgtcggtgtcggaca-cgacacgtgttcgacaccgggacacgcctaat 28715390  T
Q  460 ccaaggagtgtccatgcttcata 482  Q
     | || ||||| | |||||||||    
T  28715391 tcgagaagtgtacgtgcttcata 28715413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 70; Significance: 3e-31; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 323 - 481
Target Start/End: Complemental strand, 24205137 - 24204983
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtca 422  Q
    |||||||||||||||| ||||||||||| |||| ||||||||||||| |||| ||||||||| ||||||| ||||||||| ||| ||||     |||||     
T  24205137 acacggacaccggacacgacacggacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgt----cgtgtcg 24205042  T
Q  423 gacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcat 481  Q
    ||||| ||||| ||||||||||| |||||| |||||| | |||||||||| ||||||||    
T  24205041 gacactgacgcgtgtccgacaccaggacacgcctaattcgaggagtgtccgtgcttcat 24204983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 352 - 482
Target Start/End: Original strand, 25074781 - 25074913
Alignment:
Q  352 gacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgt--cggtgtcagacaccgacgcatgtccgacaccggga 449  Q
    |||| |||||||| |||| |||| ||||||||| |||||||| |||||||||||||| |||||  ||||||| |||||| |||| |||||||||| ||||    
T  25074781 gacacgccgacaccgataataatttgagaaaatgacataattgagtgtaatcataggcgttgtgtcggtgtctgacaccaacgcgtgtccgacactggga 25074880  T
Q  450 cacacctaatccaaggagtgtccatgcttcata 482  Q
    |||||||||||| |||||||| | |||||||||    
T  25074881 cacacctaatccgaggagtgttcgtgcttcata 25074913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 316 - 471
Target Start/End: Complemental strand, 25652134 - 25651977
Alignment:
Q  316 ctatgaaacacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tg 413  Q
    |||||||||||| ||||| |||| |||||||||||  ||| ||| ||||||||| |||| ||||||||| | ||||||||||||| | ||||||||  ||    
T  25652134 ctatgaaacacgaacaccagacacgacacggacactaacacgccaacacggataataatttgagaaaatgatataattcagtgtagttataggtgttgtg 25652035  T
Q  414 tcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtc 471  Q
    || ||||  ||||||||| | ||| |||||||| |||||||||||||| | |||||||    
T  25652034 tcagtgttggacaccgacacgtgttcgacaccgagacacacctaatccgaagagtgtc 25651977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 340 - 487
Target Start/End: Original strand, 37077338 - 37077493
Alignment:
Q  340 gacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--------tgtcggtgtcagacaccgac 431  Q
    ||||||||||  |||| |||||||| |||| |||| |||||| ||||||||||||| || ||||||| ||||        ||||||||||  |||| |||    
T  37077338 gacacggacagtgacacgccgacaccgataataatttgagaatataacataattcaatggaatcatatgtgtcattgtcatgtcggtgtcgtacacggac 37077437  T
Q  432 gcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcatactcaa 487  Q
    ||||||||||||| ||||||||||||||||||||| ||||| ||||||||| ||||    
T  37077438 gcatgtccgacacggggacacacctaatccaaggaatgtccgtgcttcatattcaa 37077493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 361 - 477
Target Start/End: Complemental strand, 12704715 - 12704597
Alignment:
Q  361 acacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaa 458  Q
    ||||||||| |||| ||| ||||| |||||||||| |||||||||||||||  |||||||||| |||||| |||||||||||||||| | ||||  ||||    
T  12704715 acacggataataatttgaaaaaatgacataattcaatgtaatcataggtgtcgtgtcggtgtcggacaccaacgcatgtccgacaccagaacacgtctaa 12704616  T
Q  459 tccaaggagtgtccatgct 477  Q
    ||| |||||||||| ||||    
T  12704615 tcctaggagtgtccgtgct 12704597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 359 - 482
Target Start/End: Original strand, 52369774 - 52369905
Alignment:
Q  359 cgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--------tgtcggtgtcagacaccgacgcatgtccgacaccgggac 450  Q
    ||||| ||||| |||| ||||||||| |||||||||| |||||||||||||||        ||||||| || ||||||||||| ||||| ||||||||||    
T  52369774 cgacatggataataatttgagaaaattacataattcaatgtaatcataggtgtcgtgtcggtgtcggtatcggacaccgacgcgtgtccaacaccgggac 52369873  T
Q  451 acacctaatccaaggagtgtccatgcttcata 482  Q
    ||||||| ||| |||||||||| |||||||||    
T  52369874 acacctattccgaggagtgtccgtgcttcata 52369905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 327 - 482
Target Start/End: Complemental strand, 16789742 - 16789586
Alignment:
Q  327 ggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgtcaga 424  Q
    |||||||||| |||||||||| ||||| |||||||||| |||| |||| ||||||||| |||||||||||||||     ||| ||  ||||||| || ||    
T  16789742 ggacaccggagatgacacggataccgagatgccgacacagataataatttgagaaaatgacataattcagtgta-----aggcgtcgtgtcggtatcgga 16789648  T
Q  425 caccgac----gcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||| ||    |  ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  16789647 caccaacacgtgtgtgtccgacaacgggacacacctaatcctaggagtgtccatgcttcata 16789586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 361 - 470
Target Start/End: Original strand, 21211289 - 21211400
Alignment:
Q  361 acacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaa 458  Q
    ||||||||| |||| ||||||||| ||||| ||||||||||| || |||||  |||||||||  ||||||||||| |||||||||| ||||||| |||||    
T  21211289 acacggataataatttgagaaaattacatagttcagtgtaattatgggtgtcgtgtcggtgttcgacaccgacgcgtgtccgacactgggacactcctaa 21211388  T
Q  459 tccaaggagtgt 470  Q
    ||| ||||||||    
T  21211389 tccgaggagtgt 21211400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 380 - 482
Target Start/End: Complemental strand, 40993374 - 40993276
Alignment:
Q  380 aaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttc 479  Q
    ||||| ||||||||||||||||| ||| ||||   ||||||| ||||| ||| |||||||||||||||||||| |||||||| |||||||||||||||||    
T  40993374 aaaatcacataattcagtgtaattatatgtgt---cggtgtcggacac-gacacatgtccgacaccgggacacgcctaatccgaggagtgtccatgcttc 40993279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 371 - 482
Target Start/End: Complemental strand, 3730213 - 3730109
Alignment:
Q  371 taatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgt 470  Q
    |||| ||||| ||| |||||||||||||||||||||||||| ||    ||| |||||| | ||||||||   ||||||||||||||||||| ||||||||    
T  3730213 taatttgagataatgacataattcagtgtaatcataggtgtcgt----gtctgacaccaatgcatgtcc---accgggacacacctaatccgaggagtgt 3730121  T
Q  471 ccatgcttcata 482  Q
    ||||||||||||    
T  3730120 ccatgcttcata 3730109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 351 - 482
Target Start/End: Original strand, 15864824 - 15864950
Alignment:
Q  351 cgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggac 450  Q
    ||||| ||||||||||||| |||| ||| ||||| | |||||| |||||||||||||||||     ||||| ||||||||| | |||| |||| ||||||    
T  15864824 cgacacgccgacacggataataatttgaaaaaatgatataatttagtgtaatcataggtgt----cgtgtcggacaccgacacgtgtctgaca-cgggac 15864918  T
Q  451 acacctaatccaaggagtgtccatgcttcata 482  Q
    || |||||||||| |||||||| |||||||||    
T  15864919 acgcctaatccaaagagtgtccgtgcttcata 15864950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 324 - 481
Target Start/End: Original strand, 28917965 - 28918120
Alignment:
Q  324 cacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtc-- 421  Q
    ||||||||||||||| |||||||| || |||| |||||||  | || |||| ||| ||||| ||||||||||||||||| | | |   ||||||||||      
T  28917965 cacggacaccggacacgacacggaaactgacacgccgacatagctaataatttgaaaaaatcacataattcagtgtaattacaag---tgtcggtgtcgt 28918061  T
Q  422 agacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcat 481  Q
     |||| |||| | |||||||||| ||||||| ||||||||||||||||||| ||||||||    
T  28918062 ggaca-cgacacgtgtccgacactgggacacgcctaatccaaggagtgtccctgcttcat 28918120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 325 - 482
Target Start/End: Original strand, 55401040 - 55401193
Alignment:
Q  325 acggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcaga 424  Q
    |||||||||||| | ||||||||||| || | ||||||||   || |||| ||| ||||| |||||||| |||||||| | | |   |||||||||| ||    
T  55401040 acggacaccggatacgacacggacactgatacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattacaag---tgtcggtgtcgga 55401136  T
Q  425 caccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    || |||| | |||||||||||| ||||| |||||||| |||||||||| |||||||||    
T  55401137 ca-cgacacgtgtccgacaccgagacacgcctaatccgaggagtgtccgtgcttcata 55401193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 323 - 482
Target Start/End: Complemental strand, 16000112 - 15999951
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtca 422  Q
    |||||||||||| ||| ||||| ||||| |||| ||||||||   || |||| | | ||||||||||||||||||||||  | | ||||   |||||||     
T  16000112 acacggacaccgaacacgacacagacactgacacgccgacacaactaataatttaaaaaaataacataattcagtgtaactacaagtgt---cggtgtcg 16000016  T
Q  423 gacac-----cgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||||     |||| | |||||||||||||||||| ||||||||||||||||||| ||| |||||    
T  16000015 gacacgtacacgacacgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgcatcata 15999951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 323 - 482
Target Start/End: Original strand, 7171465 - 7171619
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtca 422  Q
    |||| ||||||||||| |||||||| || ||||||||||||| | |  |||| ||| ||||| | ||||||| ||||||| | | ||||||   |||||     
T  7171465 acacagacaccggacacgacacggatactgacatgccgacacagcttgtaatttga-aaaatcatataattcggtgtaattacaagtgttg---gtgtcg 7171560  T
Q  423 gacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    ||||| ||| | |||||||||||| ||||| |||||||||||||||||  ||||||||||    
T  7171561 gacac-gacacgtgtccgacaccgcgacacgcctaatccaaggagtgtatatgcttcata 7171619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 482
Target Start/End: Original strand, 8903423 - 8903553
Alignment:
Q  351 cgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgtcagacaccgacgcatgtccgacaccggg 448  Q
    ||||| ||||||||||||| || | ||||||||| ||||| || |||||||| ||||||||  ||||| || | |||||| | || ||||||||  ||||    
T  8903423 cgacacgccgacacggataatattttgagaaaatgacatattt-agtgtaattataggtgtcgtgtcgatgccggacacctatgcgtgtccgac--cggg 8903519  T
Q  449 acacacctaatccaaggagtgtccatgcttcata 482  Q
    ||||||||||||| |||||||| | |||||||||    
T  8903520 acacacctaatccgaggagtgttcgtgcttcata 8903553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 325 - 402
Target Start/End: Complemental strand, 8587115 - 8587038
Alignment:
Q  325 acggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 402  Q
    |||||||||||||||||||||||||| |||| ||||||||   || |||| ||| ||||| |||||||| ||||||||    
T  8587115 acggacaccggacatgacacggacactgacacgccgacacatctagtaatttgaaaaaatcacataattaagtgtaat 8587038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 358 - 484
Target Start/End: Complemental strand, 8789611 - 8789487
Alignment:
Q  358 ccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccg-acgcatgtccgacaccgggacacacct 456  Q
    ||||||||| |  |||| ||||||||| ||||||||| ||||||| ||| ||||   ||||||| |||||   || |||||| ||||||| ||||| |||    
T  8789611 ccgacacggcttataatttgagaaaatcacataattccgtgtaattatatgtgt---cggtgtcggacacgacacacatgtcggacaccgagacacgcct 8789515  T
Q  457 aatccaaggagtgtccatgcttcatact 484  Q
    ||||| |||||||||| |||||||||||    
T  8789514 aatccgaggagtgtccgtgcttcatact 8789487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 371 - 482
Target Start/End: Original strand, 20503476 - 20503583
Alignment:
Q  371 taatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgt 470  Q
    |||| ||| ||||| ||||||||||||||||| | | ||||   ||||||  ||||| ||| |||||| ||||||||||||| |||||||| ||||||||    
T  20503476 taatttgaaaaaatgacataattcagtgtaattacaagtgt---cggtgttggacac-gacacatgtctgacaccgggacacgcctaatccgaggagtgt 20503571  T
Q  471 ccatgcttcata 482  Q
    || |||||||||    
T  20503572 ccgtgcttcata 20503583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 380 - 482
Target Start/End: Original strand, 21861589 - 21861693
Alignment:
Q  380 aaaataacataattcagtgtaatcataggtgttg--tcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgct 477  Q
    ||||| ||||||||||||||||||||| |||| |  | ||||||| |||||||||| || ||  | |  ||||||||||||||| |||||||||| ||||    
T  21861589 aaaatgacataattcagtgtaatcataagtgtagcgttggtgtcaaacaccgacgcgtgaccaccgcttggacacacctaatccgaggagtgtccgtgct 21861688  T
Q  478 tcata 482  Q
    |||||    
T  21861689 tcata 21861693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 340 - 413
Target Start/End: Complemental strand, 25948966 - 25948893
Alignment:
Q  340 gacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttg 413  Q
    ||||||||||| |||||||||| |||| || |||| ||| ||||| ||||||||||||||||| ||| ||||||    
T  25948966 gacacggacactgacatgccgatacggctaataatttgaaaaaatcacataattcagtgtaattataagtgttg 25948893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 430 - 482
Target Start/End: Original strand, 8039284 - 8039336
Alignment:
Q  430 acgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||| |||||||| |||||||||||||||||||||||||||  ||||||||||    
T  8039284 acgcgtgtccgactccgggacacacctaatccaaggagtgtttatgcttcata 8039336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 323 - 411
Target Start/End: Original strand, 8383220 - 8383308
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 411  Q
    |||||||||| ||||| ||||||||||  |||| |||||||| | || |||| ||||||||| | ||||||||||||||| ||| ||||    
T  8383220 acacggacactggacacgacacggacattgacacgccgacaccgctaataatttgagaaaatcatataattcagtgtaattataagtgt 8383308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 388 - 480
Target Start/End: Original strand, 12100297 - 12100385
Alignment:
Q  388 ataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttca 480  Q
    ||||||||||||||| |||||||| ||    ||| |||||  |||| ||||||||||||||||||||||| ||| ||||||| || |||||||    
T  12100297 ataattcagtgtaataataggtgtcgt----gtctgacactaacgcgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 12100385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 323 - 402
Target Start/End: Complemental strand, 15796390 - 15796311
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 402  Q
    |||||||||||||||| ||||||||||  |||| |||||||| | || |||| ||| ||||| | |||||||||||||||    
T  15796390 acacggacaccggacacgacacggacaatgacacgccgacacagttaataatttgaaaaaatcatataattcagtgtaat 15796311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 371 - 481
Target Start/End: Original strand, 29508455 - 29508567
Alignment:
Q  371 taatatgagaaaataacataattcagtgtaatcataggtgt---tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggag 467  Q
    |||| ||| ||||| | ||||||||||||||| ||| ||||   ||| |||||| ||||| ||| || |||||||||||||||||  |||||||||| ||    
T  29508455 taatttgaaaaaatcatataattcagtgtaattatatgtgtcgatgttggtgtcggacac-gacacacgtccgacaccgggacacgtctaatccaagaag 29508553  T
Q  468 tgtccatgcttcat 481  Q
    ||||| ||||||||    
T  29508554 tgtccgtgcttcat 29508567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 435 - 482
Target Start/End: Complemental strand, 34185100 - 34185053
Alignment:
Q  435 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||||||||||||||||| |||||||| |||||||||| |||||||||    
T  34185100 tgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcata 34185053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 323 - 427
Target Start/End: Complemental strand, 34307876 - 34307770
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgt 420  Q
    ||||| |||||||||||||||| |||||  ||| || ||||| | || |||| ||||||||| ||||| ||||||||||| ||| ||||  |||||||||    
T  34307876 acacgaacaccggacatgacacagacacgaacacgctgacaccgctaataatttgagaaaatcacatatttcagtgtaattataagtgtcgtgtcggtgt 34307777  T
Q  421 cagacac 427  Q
    | |||||    
T  34307776 cggacac 34307770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 482
Target Start/End: Complemental strand, 2408661 - 2408591
Alignment:
Q  412 tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||||| ||||||||| || || ||| |||||||||||||| ||||||| ||||||| ||| |||||||||    
T  2408661 tgtcggagtcagacactgatgcgtgttcgacaccgggacacgcctaatctaaggagtctccgtgcttcata 2408591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 468
Target Start/End: Original strand, 10954932 - 10955056
Alignment:
Q  340 gacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtcc 439  Q
    |||||| |||| |||| ||||||||   || |||| ||| ||||| ||||||||||||||||||| | |   |||||||||| |||| |||| | |||||    
T  10954932 gacacgaacactgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaatcacaag---tgtcggtgtcggaca-cgacacgtgtcc 10955027  T
Q  440 gacaccgggacacacctaatccaaggagt 468  Q
    ||||| ||||||| |||||||| ||||||    
T  10955028 gacactgggacacgcctaatccgaggagt 10955056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 413
Target Start/End: Complemental strand, 16192842 - 16192756
Alignment:
Q  327 ggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttg 413  Q
    ||||| |||||||||| | ||  ||||||  ||||||| | || |||| ||||||||||||||||||||||||||| ||| ||||||    
T  16192842 ggacatcggacatgactcagatgccgacacaccgacaccgttaataatttgagaaaataacataattcagtgtaattatatgtgttg 16192756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 482
Target Start/End: Original strand, 27903596 - 27903756
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgt 420  Q
    |||||||||||||||| ||||  |||||| | ||| | |||| |||| |||| ||||||||  | |||||| | |||||||||| ||||  |||||||||    
T  27903596 acacggacaccggacacgaca-agacaccaatatgtcaacacagataataatttgagaaaacgatataatttaatgtaatcataagtgttgtgtcggtgt 27903694  T
Q  421 cagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    | || |||||||| |||| ||||| ||  ||  |||||||| || ||||||| |||||||||    
T  27903695 cggataccgacgcgtgtctgacactggatcatgcctaatccgagaagtgtccgtgcttcata 27903756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 428 - 482
Target Start/End: Complemental strand, 49651771 - 49651717
Alignment:
Q  428 cgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||| ||| ||||||||||||||||||||||||| || ||||||| |||||||||    
T  49651771 cgacacatatccgacaccgggacacacctaatccgagaagtgtccgtgcttcata 49651717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 482
Target Start/End: Complemental strand, 51512231 - 51512118
Alignment:
Q  371 taatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagt 468  Q
    |||| ||| ||||| |||||||||| || ||||||| ||||  ||||||||||  ||||||| || |||| |||||| |||||| ||||| | |||||||    
T  51512231 taatttgataaaatcacataattcaatggaatcatatgtgtcgtgtcggtgtcgaacaccgatgcgtgtctgacaccaggacacgcctaacctaaggagt 51512132  T
Q  469 gtccatgcttcata 482  Q
    ||||  ||||||||    
T  51512131 gtccgcgcttcata 51512118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 422 - 482
Target Start/End: Complemental strand, 5407260 - 5407200
Alignment:
Q  422 agacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||||| ||| | |||||||| || |||||| |||||||||| ||||||||||||||||||    
T  5407260 agacacagacacgtgtccgacgccaggacacgcctaatccaaagagtgtccatgcttcata 5407200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 435 - 482
Target Start/End: Original strand, 1389909 - 1389956
Alignment:
Q  435 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    ||||||||||| |||||  ||||||||||||||||||| |||||||||    
T  1389909 tgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 1389956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 411
Target Start/End: Original strand, 1830335 - 1830394
Alignment:
Q  352 gacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 411  Q
    |||||||||||||   || |||| | ||||||| ||||||||||||||||||||||||||    
T  1830335 gacatgccgacacttttaataatttaagaaaatgacataattcagtgtaatcataggtgt 1830394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 435 - 482
Target Start/End: Complemental strand, 3164019 - 3163972
Alignment:
Q  435 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||||||||||| ||||| |||||| | ||||||||||||||||||||    
T  3164019 tgtccgacaccgagacacgcctaattcgaggagtgtccatgcttcata 3163972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 325 - 400
Target Start/End: Complemental strand, 4466694 - 4466619
Alignment:
Q  325 acggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgta 400  Q
    ||||||||||||||||||||| |||| ||||  ||||||| | || |||| | ||||||| | |||||||||||||    
T  4466694 acggacaccggacatgacacgaacactgacactccgacaccggtaataatttaagaaaatcatataattcagtgta 4466619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 402
Target Start/End: Complemental strand, 4991063 - 4990984
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 402  Q
    |||||||||||| ||| |||||||| || ||||  ||||||| | || || | ||||||||| |||||||||||||||||    
T  4991063 acacggacaccgaacacgacacggagactgacactccgacaccgctaatagtttgagaaaattacataattcagtgtaat 4990984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 20691325 - 20691383
Alignment:
Q  366 gatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacac 427  Q
    |||| |||| ||||||||| ||||||||||||||||||||| |   ||||||||||||||||    
T  20691325 gataataatttgagaaaatgacataattcagtgtaatcatatg---tgtcggtgtcagacac 20691383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 435 - 482
Target Start/End: Original strand, 27505322 - 27505369
Alignment:
Q  435 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||||||||||||||||  |||||||| |||||||||| |||||||||    
T  27505322 tgtccgacaccgggacatgcctaatccgaggagtgtccgtgcttcata 27505369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 435 - 482
Target Start/End: Original strand, 40052383 - 40052430
Alignment:
Q  435 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||||||||||||||||| |||||||| |||||||| | |||||||||    
T  40052383 tgtccgacaccgggacacgcctaatccgaggagtgttcgtgcttcata 40052430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 323 - 401
Target Start/End: Complemental strand, 3164121 - 3164043
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaa 401  Q
    |||||||||||||||| ||||||||||  | || | |||||| | || |||| ||| ||||| ||||||||||||||||    
T  3164121 acacggacaccggacacgacacggacaatggcacgtcgacacagctaataatttgaaaaaatcacataattcagtgtaa 3164043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 435 - 481
Target Start/End: Complemental strand, 4987268 - 4987222
Alignment:
Q  435 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttcat 481  Q
    |||||||||||||||||| |||||||| |||||||||| | ||||||    
T  4987268 tgtccgacaccgggacacgcctaatccgaggagtgtccgtacttcat 4987222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 322 - 364
Target Start/End: Complemental strand, 10335383 - 10335341
Alignment:
Q  322 aacacggacaccggacatgacacggacaccgacatgccgacac 364  Q
    ||||||||||||||||| ||||||||||| |||| ||||||||    
T  10335383 aacacggacaccggacacgacacggacactgacacgccgacac 10335341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 14209173 - 14209242
Alignment:
Q  412 tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||||||||| ||||| ||| | ||| ||||| ||||| |||||||||||||| ||||||| |||||||||    
T  14209173 tgtcggtgtcggacac-gacacgtgtacgacatcgggatacacctaatccaagaagtgtccgtgcttcata 14209242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 340 - 402
Target Start/End: Original strand, 21720744 - 21720806
Alignment:
Q  340 gacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 402  Q
    ||||||||||| |||| |||||||| |||| |||| |||||| ||  ||||||||||||||||    
T  21720744 gacacggacactgacacgccgacaccgataataatttgagaatatctcataattcagtgtaat 21720806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 321 - 411
Target Start/End: Original strand, 25093463 - 25093553
Alignment:
Q  321 aaacacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 411  Q
    |||||| ||||||||||| ||||| |||||  ||| |||||||| | || | || ||||||||| ||| ||||||||||||| ||| ||||    
T  25093463 aaacacagacaccggacacgacactgacactaacacgccgacactgttaatgatttgagaaaatcacacaattcagtgtaattatatgtgt 25093553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 436 - 482
Target Start/End: Complemental strand, 51206340 - 51206294
Alignment:
Q  436 gtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||||||||||||| ||  |||||||||||||||||| |||||||||    
T  51206340 gtccgacaccgggatacctctaatccaaggagtgtccgtgcttcata 51206294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 323 - 355
Target Start/End: Original strand, 14027978 - 14028010
Alignment:
Q  323 acacggacaccggacatgacacggacaccgaca 355  Q
    |||||||||||||||| ||||||||||||||||    
T  14027978 acacggacaccggacacgacacggacaccgaca 14028010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 439 - 483
Target Start/End: Original strand, 14216978 - 14217022
Alignment:
Q  439 cgacaccgggacacacctaatccaaggagtgtccatgcttcatac 483  Q
    |||||| |||||||||||||||| || ||||||| ||||||||||    
T  14216978 cgacactgggacacacctaatccgagaagtgtccgtgcttcatac 14217022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 439 - 483
Target Start/End: Original strand, 14223107 - 14223151
Alignment:
Q  439 cgacaccgggacacacctaatccaaggagtgtccatgcttcatac 483  Q
    |||||| |||||||||||||||| || ||||||| ||||||||||    
T  14223107 cgacactgggacacacctaatccgagaagtgtccgtgcttcatac 14223151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 327 - 395
Target Start/End: Original strand, 14829657 - 14829724
Alignment:
Q  327 ggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattca 395  Q
    |||||||||||||||||| ||||| |||| |||||||| | || |||| ||| ||||| ||||||||||    
T  14829657 ggacaccggacatgacacagacactgacacgccgacacagctaataatttga-aaaatcacataattca 14829724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 327 - 411
Target Start/End: Complemental strand, 32804631 - 32804548
Alignment:
Q  327 ggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 411  Q
    ||||||||| || ||||||| ||  ||||||||||||| | || |||| ||||||||| |||||||| |||||||| ||| ||||    
T  32804631 ggacaccgg-cacgacacgggcattgacatgccgacaccgttaataatttgagaaaatcacataatttagtgtaattatatgtgt 32804548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 359 - 411
Target Start/End: Original strand, 34189426 - 34189478
Alignment:
Q  359 cgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 411  Q
    |||||| |||| |||| ||||||||| ||||| |||||||||||| |||||||    
T  34189426 cgacacagataataatttgagaaaatgacatatttcagtgtaatcgtaggtgt 34189478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 318 - 402
Target Start/End: Original strand, 39001990 - 39002074
Alignment:
Q  318 atgaaacacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 402  Q
    ||||| ||||||||||| ||| |||||| |||| ||||  |||||| |||||  ||| ||| ||||| |||||||||| ||||||    
T  39001990 atgaagcacggacaccgaacacgacacgtacactgacacaccgacatggataggaatttgaaaaaatcacataattcaatgtaat 39002074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 2e-29; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 21 - 139
Target Start/End: Original strand, 6314191 - 6314309
Alignment:
Q  21 aatgctttggctgctttggaagctattgattcagatgttgctgatgaagttatgagagttggttgtattactggtgatagaattaatggccttgttgatg 120  Q
    ||||||||||||||||||||||| || |||    ||||||||||||||||||||||||||||||| || || ||||||||||| ||||| ||||| ||||    
T  6314191 aatgctttggctgctttggaagcaatagatatgaatgttgctgatgaagttatgagagttggttgcatcacaggtgatagaatcaatgggcttgtggatg 6314290  T
Q  121 gagtttctggttcttggta 139  Q
    |||||||||| ||||||||    
T  6314291 gagtttctgggtcttggta 6314309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 323 - 482
Target Start/End: Complemental strand, 26205856 - 26205695
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgt 420  Q
    ||||||||||||||||||||| |||||| |||| | ||| || ||||  | | ||||||||| ||||||||||||||||||||||||||  ||| |||||    
T  26205856 acacggacaccggacatgacatggacactgacacgtcgataccgataaaattttgagaaaatgacataattcagtgtaatcataggtgtcgtgttggtgt 26205757  T
Q  421 cagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    | |||||| |||| | |||||||||||||||||| ||||||||   |||||| |||||||||    
T  26205756 cggacaccaacgcgtatccgacaccgggacacacgtaatccaaaaggtgtccgtgcttcata 26205695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 313 - 460
Target Start/End: Original strand, 21137642 - 21137789
Alignment:
Q  313 aagctatgaaacacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgtt 412  Q
    |||||||||| |||||||||||||||  |||||||||| |||| |||||||  | || |||| ||||||||| || |||||||||| ||||||||||||     
T  21137642 aagctatgaagcacggacaccggacacaacacggacactgacacgccgacatcggtaataatctgagaaaatgacgtaattcagtgaaatcataggtgtc 21137741  T
Q  413 gtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatc 460  Q
    ||    ||| |||||| |||| ||||||||||||||||||||||||||    
T  21137742 gtgtcggtcggacaccaacgcgtgtccgacaccgggacacacctaatc 21137789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 323 - 481
Target Start/End: Complemental strand, 21191152 - 21190998
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtca 422  Q
    |||| ||||||||||| ||||||||||| ||||||||||||| | || |||| ||| ||||| ||||||||||||||||| | | |   ||||||||||     
T  21191152 acactgacaccggacacgacacggacactgacatgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaag---tgtcggtgtcg 21191056  T
Q  423 gacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcat 481  Q
    |||| | || | |||||||| ||||||||| |||||||| |||||||||| ||||||||    
T  21191055 gaca-caacacgtgtccgactccgggacacgcctaatccgaggagtgtccgtgcttcat 21190998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 359 - 472
Target Start/End: Original strand, 43554520 - 43554634
Alignment:
Q  359 cgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacct 456  Q
    ||||||| ||| |||| ||||||||| | |||||| |||||||||||||||||  |||||||||| ||||||||||| ||||||||| |||||||| |||    
T  43554520 cgacacgtataataatttgagaaaatgatataatttagtgtaatcataggtgtcgtgtcggtgtcggacaccgacgcgtgtccgaca-cgggacacgcct 43554618  T
Q  457 aatccaaggagtgtcc 472  Q
    ||||| || |||||||    
T  43554619 aatccgagaagtgtcc 43554634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 323 - 482
Target Start/End: Original strand, 21522713 - 21522879
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatca------taggtgt--tgt 414  Q
    |||||| ||||||||| ||||||||||| |||| |||||||| | || |||| | | ||||||||||||||||||||||| |      | |||||  |||    
T  21522713 acacggtcaccggacacgacacggacactgacacgccgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgt 21522812  T
Q  415 cggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    ||||||| |||| |||| | |||||| ||||||||||| |||||||||| |||||||| ||| |||||    
T  21522813 cggtgtcggaca-cgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcatcata 21522879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 323 - 482
Target Start/End: Original strand, 21533279 - 21533445
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatca------taggtgt--tgt 414  Q
    |||||| ||||||||| ||||||||||| |||| |||||||| | || |||| | | ||||||||||||||||||||||| |      | |||||  |||    
T  21533279 acacggtcaccggacacgacacggacactgacacgccgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgt 21533378  T
Q  415 cggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    ||||||| |||| |||| | |||||| ||||||||||| |||||||||| |||||||| ||| |||||    
T  21533379 cggtgtcggaca-cgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcatcata 21533445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 360 - 482
Target Start/End: Original strand, 2419857 - 2419985
Alignment:
Q  360 gacacggatattaatatgagaaaataacataattcagtgtaatcataggt--gt----tgtcggtgtcagacaccgacgcatgtccgacaccgggacaca 453  Q
    ||||| |||| |||| ||||||||| ||| ||||||||||||||||  ||  ||    ||| ||||||||||||||| || |||||||| ||||||||||    
T  2419857 gacactgataataatttgagaaaattacacaattcagtgtaatcatgtgtcagtgccgtgttggtgtcagacaccgatgcgtgtccgaccccgggacaca 2419956  T
Q  454 cctaatccaaggagtgtccatgcttcata 482  Q
    |||||||| | |||||||| |||||||||    
T  2419957 cctaatccgatgagtgtccgtgcttcata 2419985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 352 - 482
Target Start/End: Complemental strand, 28588741 - 28588615
Alignment:
Q  352 gacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggaca 451  Q
    |||| |||||||| | || |||| ||||||||| ||||||||||||||||| |||||   |||||||||| |||| |||| ||| || |||||| |||||    
T  28588741 gacacgccgacaccggtaataatttgagaaaatcacataattcagtgtaattatagg---tgtcggtgtcggaca-cgacacatatctgacaccaggaca 28588646  T
Q  452 cacctaatccaaggagtgtccatgcttcata 482  Q
    | | |||||| | ||||||||||||||||||    
T  28588645 cgcttaatccgaagagtgtccatgcttcata 28588615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 323 - 409
Target Start/End: Original strand, 42469184 - 42469270
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggt 409  Q
    |||||||||||| ||| |||||||| |  |||| ||||||||||||| |||| ||||||||| ||||| || |||||||||||||||    
T  42469184 acacggacaccgaacacgacacggataatgacacgccgacacggataataatttgagaaaatgacatattttagtgtaatcataggt 42469270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 323 - 471
Target Start/End: Original strand, 15382440 - 15382592
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacata--attcagtgtaatcataggtgt---tgtcgg 417  Q
    |||||||||||||||| ||||||||||  |||| |||||||| | || |||| ||| |||| | ||||  ||||||| |||| | | ||||   ||||||    
T  15382440 acacggacaccggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaaaatcatataattcagtataattacaagtgtcggtgtcgg 15382539  T
Q  418 tgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtc 471  Q
    |||  ||||| ||| |||||||||||||||||||| |||||||| |||||||||    
T  15382540 tgttggacac-gacacatgtccgacaccgggacacgcctaatccgaggagtgtc 15382592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 323 - 402
Target Start/End: Complemental strand, 6326393 - 6326314
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 402  Q
    ||||||| |||||||| ||||||||||| |||| |||||||  | || |||| ||||||||| |||||||||||||||||    
T  6326393 acacggataccggacacgacacggacactgacacgccgacatcgctagtaatttgagaaaattacataattcagtgtaat 6326314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 480
Target Start/End: Complemental strand, 18586367 - 18586232
Alignment:
Q  340 gacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtcc 439  Q
    ||||| ||||| |||||| ||| ||||||| |||| ||| ||||| ||||||| ||||||||| |||||||| ||    ||| || || |||||||||||    
T  18586367 gacactgacactgacatgtcgatacggataataatttga-aaaatgacataatacagtgtaattataggtgtcgt----gtccgagactgacgcatgtcc 18586273  T
Q  440 gacaccgggacacacctaatccaaggagtgtccatgcttca 480  Q
    ||| | || ||||||||||| | |||||||||| |||||||    
T  18586272 gactctggaacacacctaattcgaggagtgtccgtgcttca 18586232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 323 - 401
Target Start/End: Complemental strand, 13287495 - 13287417
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaa 401  Q
    |||||||||||||||| |||||||||||  ||| | |||||| |||| |||| ||| ||||| ||||||||||||||||    
T  13287495 acacggacaccggacacgacacggacactaacacgtcgacacagataataatttgaaaaaatcacataattcagtgtaa 13287417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 358 - 411
Target Start/End: Complemental strand, 18607158 - 18607105
Alignment:
Q  358 ccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 411  Q
    |||||| ||||| |||| |||||||||||||||||||| |||||||||||||||    
T  18607158 ccgacatggataataatttgagaaaataacataattcaatgtaatcataggtgt 18607105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 360 - 472
Target Start/End: Complemental strand, 21577167 - 21577055
Alignment:
Q  360 gacacggatattaatatgagaaaataacataattcagtgtaatcataggtg-ttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaa 458  Q
    ||||| |||| |||| |||||||||||||||||| |||||||| |||||||  |||  ||||||||||||||||| ||| || || | ||||||||| ||    
T  21577167 gacaccgataataatttgagaaaataacataattaagtgtaataataggtgagtgt-tgtgtcagacaccgacgcgtgtacggcatcaggacacaccaaa 21577069  T
Q  459 tccaaggagtgtcc 472  Q
    ||| || |||||||    
T  21577068 tccgagtagtgtcc 21577055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 433 - 482
Target Start/End: Complemental strand, 38464363 - 38464314
Alignment:
Q  433 catgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    ||||||||||||||||||||||||||||| |||||||||  |||||||||    
T  38464363 catgtccgacaccgggacacacctaatccgaggagtgtctgtgcttcata 38464314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 323 - 411
Target Start/End: Complemental strand, 16203891 - 16203803
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 411  Q
    |||| ||||||| |||||||||||||||  |||||||||||| | || |||| |||||||||  ||||||| |||||||| ||| ||||    
T  16203891 acacagacaccgaacatgacacggacactaacatgccgacactgctaataatttgagaaaatctcataatttagtgtaattatatgtgt 16203803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 371 - 481
Target Start/End: Complemental strand, 30502436 - 30502330
Alignment:
Q  371 taatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgt 470  Q
    |||| ||||||||| || |||||||||||||| ||| ||||   ||||||| ||||| ||| |||||||||||| ||||||  ||||||||||||| |||    
T  30502436 taatttgagaaaatcacttaattcagtgtaattatatgtgt---cggtgtcggacac-gacacatgtccgacactgggacatgcctaatccaaggattgt 30502341  T
Q  471 ccatgcttcat 481  Q
     | ||||||||    
T  30502340 tcgtgcttcat 30502330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 371 - 481
Target Start/End: Complemental strand, 30542779 - 30542673
Alignment:
Q  371 taatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgt 470  Q
    |||| ||||||||| || |||||||||||||| ||| ||||   ||||||| ||||| ||| |||||||||||| ||||||  ||||||||||||| |||    
T  30542779 taatttgagaaaatcacttaattcagtgtaattatatgtgt---cggtgtcggacac-gacacatgtccgacactgggacatgcctaatccaaggattgt 30542684  T
Q  471 ccatgcttcat 481  Q
     | ||||||||    
T  30542683 tcgtgcttcat 30542673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 481
Target Start/End: Original strand, 43001780 - 43001922
Alignment:
Q  340 gacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcg--gtgtcagacaccgacgcatgt 437  Q
    ||||||||||| |||||| |||||| | || |||| ||| ||||| ||||||||||||||||| | | ||||||  |  ||||| |||| |||| | |||    
T  43001780 gacacggacactgacatgtcgacactgctaataatttgaaaaaattacataattcagtgtaattacaagtgttggtgatgtgtcggaca-cgacacgtgt 43001878  T
Q  438 ccgacaccgggacacacctaatccaaggagtgtccatgcttcat 481  Q
    |  ||||| |||||| |||||||| |||||||||| ||||||||    
T  43001879 caaacacctggacacgcctaatccgaggagtgtccgtgcttcat 43001922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 482
Target Start/End: Original strand, 21541993 - 21542159
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--------tgt 414  Q
    ||||||||||| |||| ||||| ||||  |||||||||||||   || |||| | | || |||||||||||||||||||| | | ||||        |||    
T  21541993 acacggacaccagacacgacacagacattgacatgccgacacaactaataatttaaaaagataacataattcagtgtaattacaagtgtcggtgtcgtgt 21542092  T
Q  415 cggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    ||||||| ||||| ||| | |||||||||||||||||| || |||||||||| ||||| ||| |||||    
T  21542093 cggtgtcggacac-gacacgtgtccgacaccgggacacgccgaatccaaggaatgtccgtgcatcata 21542159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 327 - 412
Target Start/End: Complemental strand, 19293515 - 19293430
Alignment:
Q  327 ggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgtt 412  Q
    ||||||| |||| ||||| |||||| ||| || |||||  ||| |||| | |||||||||||||||| |||||||||||| |||||    
T  19293515 ggacaccagacacgacacagacaccaacacgctgacaccaataataatttaagaaaataacataattaagtgtaatcatatgtgtt 19293430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 371 - 478
Target Start/End: Complemental strand, 21194171 - 21194068
Alignment:
Q  371 taatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgt 470  Q
    |||| ||||||||| |||| |||||||||||| |||||| ||   |||||  |||| |||| |||||| ||||||||| ||| |||||||| ||||||||    
T  21194171 taatttgagaaaatcacatcattcagtgtaattataggtatt---ggtgttggaca-cgacacatgtcagacaccggggcacgcctaatccgaggagtgt 21194076  T
Q  471 ccatgctt 478  Q
    || |||||    
T  21194075 ccgtgctt 21194068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 325 - 402
Target Start/End: Original strand, 22013379 - 22013456
Alignment:
Q  325 acggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 402  Q
    |||||||||||||| ||||||||||| |||| |||||||| | || |||| ||  ||||| |||||||| ||||||||    
T  22013379 acggacaccggacacgacacggacactgacacgccgacacagctaataatttggaaaaattacataatttagtgtaat 22013456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 402
Target Start/End: Complemental strand, 24906390 - 24906318
Alignment:
Q  330 caccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 402  Q
    ||||||||| |||||| |||| |||| ||| |||| |||| |||| ||| ||||| |||||||||||||||||    
T  24906390 caccggacacgacacgaacactgacacgccaacacagataataatttgaaaaaatgacataattcagtgtaat 24906318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 435 - 482
Target Start/End: Original strand, 14873593 - 14873640
Alignment:
Q  435 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    ||||| |||||||||||| |||||||| |||||||||| |||||||||    
T  14873593 tgtccaacaccgggacacgcctaatccgaggagtgtccgtgcttcata 14873640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 400
Target Start/End: Complemental strand, 19552641 - 19552562
Alignment:
Q  321 aaacacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgta 400  Q
    |||||||| ||||| ||| ||||||||||| |||| |||||||| | || |||| ||| ||||| |||||||| ||||||    
T  19552641 aaacacggccaccgaacacgacacggacactgacacgccgacacagttaataatttgaaaaaatcacataattaagtgta 19552562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 435 - 482
Target Start/End: Complemental strand, 19820376 - 19820329
Alignment:
Q  435 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||||||||||||||||| |||||||  |||||||||| |||||||||    
T  19820376 tgtccgacaccgggacacgcctaatcagaggagtgtccgtgcttcata 19820329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 447
Target Start/End: Original strand, 25863175 - 25863293
Alignment:
Q  331 accggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgtcagacacc 428  Q
    |||||||| ||||| |||| ||||| | ||||| | ||| |||| ||||||||| | ||||||||||||||| ||| ||||  |||| ||||| | ||||    
T  25863175 accggacacgacacagacatcgacacgtcgacatgtataataatttgagaaaatgatataattcagtgtaattataagtgtcgtgtcagtgtcgggcacc 25863274  T
Q  429 gacgcatgtccgacaccgg 447  Q
    || || |||| ||||||||    
T  25863275 gatgcgtgtctgacaccgg 25863293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 482
Target Start/End: Original strand, 42893345 - 42893478
Alignment:
Q  345 ggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacac 444  Q
    |||||| ||||  ||||||| | || |||| ||| ||||| ||||||| ||||||||| | | ||||   |||||||||||||  || | ||||||||||    
T  42893345 ggacacggacacaccgacacagctaataatttgaaaaaatcacataatccagtgtaattacaagtgt---cggtgtcagacaca-acacgtgtccgacac 42893440  T
Q  445 cgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    | |||||| ||||||   ||||||||||||||||||||    
T  42893441 caggacacgcctaatatgaggagtgtccatgcttcata 42893478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 345 - 411
Target Start/End: Original strand, 3966488 - 3966554
Alignment:
Q  345 ggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 411  Q
    |||||| ||||||||||||| | || |||| ||||||||| ||| ||||||||||||| ||| ||||    
T  3966488 ggacactgacatgccgacaccgctaataatttgagaaaatcacacaattcagtgtaattatatgtgt 3966554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 7677765 - 7677834
Alignment:
Q  412 tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||||||||| ||||| | | |||||||||||||||||||| |||||||| ||||| |||  |||||||||    
T  7677765 tgtcggtgtctgacac-gtcacatgtccgacaccgggacacgcctaatccgaggagagtcggtgcttcata 7677834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 335 - 413
Target Start/End: Complemental strand, 15410532 - 15410454
Alignment:
Q  335 gacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttg 413  Q
    |||| ||||||||||| |||| |||||||| | || |||| | ||||||| | || |||||||||||||||| ||||||    
T  15410532 gacacgacacggacactgacacgccgacaccgctaataatttaagaaaattatatgattcagtgtaatcatatgtgttg 15410454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 433 - 471
Target Start/End: Original strand, 39342511 - 39342549
Alignment:
Q  433 catgtccgacaccgggacacacctaatccaaggagtgtc 471  Q
    |||||| ||||||||||||| ||||||||||||||||||    
T  39342511 catgtcagacaccgggacacgcctaatccaaggagtgtc 39342549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 364
Target Start/End: Original strand, 6401461 - 6401502
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacac 364  Q
    |||||||||||||||  |||||||||||||||| ||||||||    
T  6401461 acacggacaccggacgcgacacggacaccgacacgccgacac 6401502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 435 - 472
Target Start/End: Original strand, 17088362 - 17088399
Alignment:
Q  435 tgtccgacaccgggacacacctaatccaaggagtgtcc 472  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  17088362 tgtccgacaccgggacacgcctaatccgaggagtgtcc 17088399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 411
Target Start/End: Complemental strand, 18288124 - 18288059
Alignment:
Q  346 gacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 411  Q
    |||||||| | || |||||||||| |||| ||||||||| || ||| ||||| |||||||||||||    
T  18288124 gacaccgagacgctgacacggataataatttgagaaaatgacttaactcagtataatcataggtgt 18288059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 412
Target Start/End: Complemental strand, 21194253 - 21194212
Alignment:
Q  371 taatatgagaaaataacataattcagtgtaatcataggtgtt 412  Q
    |||| ||||||||| |||||||||||||||||||| ||||||    
T  21194253 taatttgagaaaatcacataattcagtgtaatcattggtgtt 21194212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 358 - 406
Target Start/End: Complemental strand, 2577241 - 2577193
Alignment:
Q  358 ccgacacggatattaatatgagaaaataacataattcagtgtaatcata 406  Q
    ||||||| |||| |||| ||||||||| |||||||| ||||||||||||    
T  2577241 ccgacaccgataataatttgagaaaatgacataatttagtgtaatcata 2577193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 326 - 402
Target Start/End: Original strand, 6247588 - 6247664
Alignment:
Q  326 cggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 402  Q
    ||||||||||||| || ||| |||| |||| ||||||||   || |||| ||| ||||| |||||||||||||||||    
T  6247588 cggacaccggacacgatacgcacactgacacgccgacacatctaataatttgaaaaaatcacataattcagtgtaat 6247664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 323 - 355
Target Start/End: Complemental strand, 19453154 - 19453122
Alignment:
Q  323 acacggacaccggacatgacacggacaccgaca 355  Q
    ||||||||||||||||||||||| |||||||||    
T  19453154 acacggacaccggacatgacacgaacaccgaca 19453122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 371 - 411
Target Start/End: Original strand, 31264449 - 31264489
Alignment:
Q  371 taatatgagaaaataacataattcagtgtaatcataggtgt 411  Q
    |||| ||||||||| ||||||||||||||||||||| ||||    
T  31264449 taatttgagaaaatgacataattcagtgtaatcataagtgt 31264489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 336 - 400
Target Start/End: Complemental strand, 32429009 - 32428945
Alignment:
Q  336 acatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgta 400  Q
    ||||||||||||||| ||||||  ||||| |||| |||| ||||||| | |||||||||| ||||    
T  32429009 acatgacacggacactgacatggtgacactgataataatttgagaaagtgacataattcaatgta 32428945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 358 - 427
Target Start/End: Complemental strand, 39696060 - 39695989
Alignment:
Q  358 ccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgtcagacac 427  Q
    ||||||| || | |||| ||||||||| | |||||| |||||||||||||||||  |||||||||| |||||    
T  39696060 ccgacaccgacaataatttgagaaaatgatataatttagtgtaatcataggtgtcgtgtcggtgtccgacac 39695989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 7e-29; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 317 - 478
Target Start/End: Original strand, 43249950 - 43250118
Alignment:
Q  317 tatgaaacacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgt 414  Q
    |||||| ||||||||||||||| ||||||||||| |||| ||||||||||||| |||| ||||||||| ||||||| ||||||||| ||| ||||  |||    
T  43249950 tatgaagcacggacaccggacaagacacggacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcgtgt 43250049  T
Q  415 cggt-----gtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgctt 478  Q
    ||||     ||| ||||| ||||| ||||||||||| |||||| |||||| | |||||||||| |||||    
T  43250050 cggtgtcgcgtcggacactgacgcgtgtccgacaccaggacacgcctaattcgaggagtgtccgtgctt 43250118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 358 - 482
Target Start/End: Complemental strand, 7133339 - 7133213
Alignment:
Q  358 ccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgt--cggtgtcagacaccgacgcatgtccgacaccgggacacacc 455  Q
    ||||||| |||  |||| ||||||||| ||||||||||||||||||||||||| |||  ||||||| ||||||||||| |||||||||| ||||||||||    
T  7133339 ccgacacagatgataatttgagaaaatgacataattcagtgtaatcataggtggtgtgtcggtgtcggacaccgacgcgtgtccgacactgggacacacc 7133240  T
Q  456 taatccaaggagtgtccatgcttcata 482  Q
    |||||  ||||| |||| |||||||||    
T  7133239 taatctgaggagcgtccgtgcttcata 7133213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 359 - 457
Target Start/End: Original strand, 23930218 - 23930318
Alignment:
Q  359 cgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacct 456  Q
    ||||||||||| |||| ||||||||| ||||||||||||||||||||||||||  |||||||||| || ||||| || ||||||||||||||| ||||||    
T  23930218 cgacacggatagtaatttgagaaaatgacataattcagtgtaatcataggtgttgtgtcggtgtcggataccgatgcgtgtccgacaccgggatacacct 23930317  T
Q  457 a 457  Q
    |    
T  23930318 a 23930318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 313 - 482
Target Start/End: Complemental strand, 4017900 - 4017730
Alignment:
Q  313 aagctatgaaacacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt- 411  Q
    |||||||||| ||| ||||| ||||| |||||||||||||||| ||||||||||||| |||| ||||||||  | |||||| |||||||||||| ||||     
T  4017900 aagctatgaagcacagacactggacacgacacggacaccgacacgccgacacggataataatttgagaaaacgatataatttagtgtaatcataagtgtc 4017801  T
Q  412 -tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
     ||| |||||| ||||||||||  |||| |||| ||| |||| ||||||| ||  ||||| | |||||||||    
T  4017800 gtgttggtgtcggacaccgacgtgtgtctgaca-cggaacacgcctaatctaaaaagtgttcgtgcttcata 4017730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 365 - 460
Target Start/End: Original strand, 5938477 - 5938574
Alignment:
Q  365 ggatattaatatgagaaaataacataattcagtgtaatcataggtgttgt--cggtgtcagacaccgacgcatgtccgacaccgggacacacctaatc 460  Q
    ||||| |||| ||| |||||||||||||||||| |||| |||||||||||  |||||||||||||||| || ||||||||||||| ||||||||||||    
T  5938477 ggataataatttgataaaataacataattcagtataattataggtgttgtgtcggtgtcagacaccgatgcgtgtccgacaccggaacacacctaatc 5938574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 351 - 470
Target Start/End: Complemental strand, 38804623 - 38804502
Alignment:
Q  351 cgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgtcagacaccgacgcatgtccgacaccggg 448  Q
    ||||| ||||||||||||| |||| | ||||||| ||||||| ||| ||||||||||||||  ||| |||||| ||||||||||  |||||||| |||||    
T  38804623 cgacacgccgacacggataataatttcagaaaatgacataatccagggtaatcataggtgtcgtgttggtgtcggacaccgacgtgtgtccgacgccggg 38804524  T
Q  449 acacacctaatccaaggagtgt 470  Q
    |||  |||||||| ||||||||    
T  38804523 acatgcctaatccgaggagtgt 38804502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 323 - 482
Target Start/End: Original strand, 598171 - 598326
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtca 422  Q
    ||||||||||| |||||||||||||||| ||||   |||||| | || |||| | ||||||| || ||||| | ||||||  || |   |||||||||||    
T  598171 acacggacaccagacatgacacggacactgacacatcgacaccgctaataatttaagaaaatcacgtaattaaatgtaattgtaag---tgtcggtgtca 598267  T
Q  423 gacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||| |||| | |||||||||||||||||| |||||||| || ||||||| |||||||||    
T  598268 gaca-cgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcata 598326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 361 - 472
Target Start/End: Original strand, 12278836 - 12278943
Alignment:
Q  361 acacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatc 460  Q
    |||| |||| |||| | ||||||| ||||||||||||||||| ||| ||||     ||||| |||||| |||| |||| |||||||||||||||||||||    
T  12278836 acactgataataatttaagaaaatgacataattcagtgtaattatatgtgt----cgtgtcggacaccaacgcgtgtctgacaccgggacacacctaatc 12278931  T
Q  461 caaggagtgtcc 472  Q
    | ||||||||||    
T  12278932 ctaggagtgtcc 12278943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 323 - 482
Target Start/End: Original strand, 21880117 - 21880270
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtca 422  Q
    ||||||||||||||||  ||||| ||||  |||||  ||||  | || |||| ||||||||| ||||||||||||||||| | | |   ||||||||||     
T  21880117 acacggacaccggaca--acacgaacactaacatgtggacatcgctaataatttgagaaaattacataattcagtgtaattacaag---tgtcggtgtcg 21880211  T
Q  423 gacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||| |||| ||||||||||||| |||||| |||||||| || ||||||| |||||||||    
T  21880212 gaca-cgacacatgtccgacaccaggacacgcctaatccgagaagtgtccgtgcttcata 21880270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 325 - 402
Target Start/End: Original strand, 27945006 - 27945083
Alignment:
Q  325 acggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 402  Q
    |||||||||||||| ||||||||||| |||| ||||||||   || |||| ||||||||| |||||||||||||||||    
T  27945006 acggacaccggacacgacacggacactgacacgccgacaccactaataatttgagaaaattacataattcagtgtaat 27945083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 435 - 484
Target Start/End: Complemental strand, 32287451 - 32287402
Alignment:
Q  435 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttcatact 484  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  32287451 tgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcatact 32287402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 344 - 445
Target Start/End: Complemental strand, 17780159 - 17780056
Alignment:
Q  344 cggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgtcagacaccgacgcatgtccga 441  Q
    ||||||||||||||| |||| ||||| |||| | ||||||| |||||||||  |||||| ||||||||  ||||||||||  |||||||||| ||||||     
T  17780159 cggacaccgacatgctgacatggataataatttaagaaaatgacataattctatgtaataataggtgtcgtgtcggtgtcgaacaccgacgcgtgtccgg 17780060  T
Q  442 cacc 445  Q
    ||||    
T  17780059 cacc 17780056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 325 - 482
Target Start/End: Original strand, 24339607 - 24339771
Alignment:
Q  325 acggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--------tgtcg 416  Q
    |||||||||||||| |||| |||||  |||| |||||||| | || |||| ||| ||||| ||||||||||||||||| | | ||||        |||||    
T  24339607 acggacaccggacacgacatggacattgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcg 24339706  T
Q  417 gtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    ||||| |||| |||| | | |||||||||||||||| |||||||| ||||||| || |||||||||    
T  24339707 gtgtcggaca-cgacacgtatccgacaccgggacacgcctaatccgaggagtgcccgtgcttcata 24339771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 345 - 482
Target Start/End: Original strand, 32308105 - 32308249
Alignment:
Q  345 ggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--------tgtcggtgtcagacaccgacgcatg 436  Q
    |||||| |||| |||||||| | || |||| ||||||||| |||||||||||||||||  || ||||        |||||||||  ||||| ||| ||||    
T  32308105 ggacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattgtatgtgtcagtgtcgtgtcggtgttggacac-gacacatg 32308203  T
Q  437 tccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||||||||| |||||| ||||||| |||||||| |||||||||||    
T  32308204 tccgacaccgagacacagctaatccgaggagtgttcatgcttcata 32308249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 435 - 482
Target Start/End: Original strand, 9778576 - 9778623
Alignment:
Q  435 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||    
T  9778576 tgtccgacaccgggacacgcctaatccaaggagtgtccgtgcttcata 9778623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 371 - 482
Target Start/End: Original strand, 1401036 - 1401141
Alignment:
Q  371 taatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgt 470  Q
    |||| ||||||| | ||||||||||||||||| ||| || |   ||||||| ||||| |||  |||||||||| ||||||||||||||||  ||||||||    
T  1401036 taatttgagaaactcacataattcagtgtaattataagtat---cggtgtccgacac-gac--atgtccgacatcgggacacacctaatctgaggagtgt 1401129  T
Q  471 ccatgcttcata 482  Q
    ||||||||||||    
T  1401130 ccatgcttcata 1401141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 341 - 481
Target Start/End: Original strand, 22868023 - 22868164
Alignment:
Q  341 acacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacac----cgacgcatg 436  Q
    |||| ||||| |||| ||||||||   || |||||||||||||| ||||||||||||||||| ||| ||||   | || ||| ||||    | || | ||    
T  22868023 acaccgacactgacacgccgacaccactaataatatgagaaaatcacataattcagtgtaattatatgtgt---cagtatcaaacacaacacaacacgtg 22868119  T
Q  437 tccgacaccgggacacacctaatccaaggagtgtccatgcttcat 481  Q
    || ||||||||||||||| |||||| |||||||||||||||||||    
T  22868120 tcagacaccgggacacacataatccgaggagtgtccatgcttcat 22868164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 326 - 482
Target Start/End: Complemental strand, 43027562 - 43027405
Alignment:
Q  326 cggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt---tgtcggtgtca 422  Q
    ||||||| ||||| ||||||||||| |||| | |||| | | || |||| ||| ||||| ||||||| ||||||||  | | ||||   ||||| |||||    
T  43027562 cggacactggacacgacacggacactgacacggcgacccagctaataatttgaaaaaatcacataatgcagtgtaaatacaagtgtcggtgtcg-tgtca 43027464  T
Q  423 gacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    ||||| ||| | |||||||||||||||||| |||||||| | |||||||| |||||||||    
T  43027463 gacac-gacacgtgtccgacaccgggacacgcctaatccgatgagtgtccgtgcttcata 43027405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 323 - 482
Target Start/End: Complemental strand, 5409932 - 5409772
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt---tgtcggtg 419  Q
    |||| ||||||||| | |||| |||||| |||| || || || | || |||| ||| ||||| ||||||||||||| ||| | | ||||   ||||| ||    
T  5409932 acacagacaccggatacgacatggacactgacacgctgatacagctaataatttgaaaaaatcacataattcagtgcaattacaagtgtcggtgtcg-tg 5409834  T
Q  420 tcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    || ||||| ||| | |||||||||||||||||| |||||||| |||||||||| |||||||||    
T  5409833 tcggacac-gacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcata 5409772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 411
Target Start/End: Complemental strand, 18233703 - 18233606
Alignment:
Q  316 ctatgaaacacggacaccggacatgacacggacaccgacatgccgacacg--gatattaatatgagaaaataacataattcagtgtaatcataggtgt 411  Q
    ||||||||||| ||||||||||||||||| || || || |  | |||||   |||| |||| ||||||||| ||||||||||||||||| ||||||||    
T  18233703 ctatgaaacacagacaccggacatgacactgatactgatacacagacacacagatagtaatttgagaaaatgacataattcagtgtaattataggtgt 18233606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 359 - 482
Target Start/End: Original strand, 23751899 - 23752017
Alignment:
Q  359 cgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaa 458  Q
    ||||||||||| |||| ||| ||||| | |||||| |||||||||||||||||     ||||| ||||||||||| |||| |||| |||||||| |||||    
T  23751899 cgacacggataataatttgataaaatgatataatttagtgtaatcataggtgt----cgtgtcggacaccgacgcgtgtcagaca-cgggacacgcctaa 23751993  T
Q  459 tccaaggagtgtccatgcttcata 482  Q
    ||| |  ||||||  |||||||||    
T  23751994 tccgataagtgtctgtgcttcata 23752017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 470
Target Start/End: Original strand, 33994261 - 33994318
Alignment:
Q  412 tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgt 470  Q
    |||||||||||||||| ||| ||||||| |||||| ||||| |||||||||||||||||    
T  33994261 tgtcggtgtcagacac-gacacatgtccaacaccgagacacgcctaatccaaggagtgt 33994318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 439 - 480
Target Start/End: Complemental strand, 8842323 - 8842282
Alignment:
Q  439 cgacaccgggacacacctaatccaaggagtgtccatgcttca 480  Q
    |||||||||||||| ||||||||||||||||||| |||||||    
T  8842323 cgacaccgggacacgcctaatccaaggagtgtccgtgcttca 8842282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 328 - 471
Target Start/End: Original strand, 26733272 - 26733411
Alignment:
Q  328 gacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacac 427  Q
    |||||| |||| ||||||||||| |||| | |||||| | || |||| ||| ||||| |||||||||||| |||| | | |   |||||||||| ||||     
T  26733272 gacaccagacacgacacggacactgacacgtcgacaccgctaataatttgacaaaatcacataattcagtctaattaaatg---tgtcggtgtcggaca- 26733367  T
Q  428 cgacgcatgtccgacaccgggacacacctaatccaaggagtgtc 471  Q
    |||||||||||||| || || |||| |||||||| ||| |||||    
T  26733368 cgacgcatgtccgatacgggaacacgcctaatccgaggggtgtc 26733411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 396
Target Start/End: Complemental strand, 11722193 - 11722121
Alignment:
Q  324 cacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcag 396  Q
    |||||| |||||||| ||||||||||| |||| |||||||| | ||  ||| ||||||||| |||||||||||    
T  11722193 cacggataccggacacgacacggacactgacacgccgacaccgctaacaatttgagaaaatcacataattcag 11722121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 358 - 484
Target Start/End: Original strand, 20549789 - 20549911
Alignment:
Q  358 ccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacaccta 457  Q
    ||||||| | || |||| ||||||||| || |||||||||||||| ||| ||||   ||||||| |||||  || |||||||||||  | ||||| ||||    
T  20549789 ccgacaccgctaataatttgagaaaatcacgtaattcagtgtaattatatgtgt---cggtgtcggacaca-acacatgtccgacaatgagacacgccta 20549884  T
Q  458 atccaaggagtgtccatgcttcatact 484  Q
    |||| ||||||| || |||||||||||    
T  20549885 atccgaggagtgcccgtgcttcatact 20549911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 435 - 482
Target Start/End: Original strand, 6490787 - 6490834
Alignment:
Q  435 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||||||||||||||||| | |||||| |||||||||| |||||||||    
T  6490787 tgtccgacaccgggacacgcttaatccgaggagtgtccgtgcttcata 6490834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 478
Target Start/End: Original strand, 13770657 - 13770810
Alignment:
Q  326 cggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcg--gtgtcag 423  Q
    |||||| |||||| ||||||||||| || | |||||||| | || |||| | | ||||| ||||||||||||||||| | | |||| || |  ||||| |    
T  13770657 cggacatcggacacgacacggacactgatacgccgacacagctaataatttaaaaaaattacataattcagtgtaattacaagtgtcgttgtcgtgtcgg 13770756  T
Q  424 acaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgctt 478  Q
    ||| | || | ||||||||||||| |||| |||||||| | |||||||| |||||    
T  13770757 aca-caacacgtgtccgacaccggaacacgcctaatccgaagagtgtccgtgctt 13770810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 435 - 482
Target Start/End: Original strand, 17852071 - 17852118
Alignment:
Q  435 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||||||||||| |||||||||||| | |||||||||| |||||||||    
T  17852071 tgtccgacaccgagacacacctaattcgaggagtgtccgtgcttcata 17852118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 395
Target Start/End: Original strand, 19206014 - 19206085
Alignment:
Q  324 cacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattca 395  Q
    |||||| ||| |||| |||||||||||| ||| |||||||| | || |||| ||||||||| ||||||||||    
T  19206014 cacggataccagacacgacacggacaccaacacgccgacaccgctaataatttgagaaaatcacataattca 19206085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 7438766 - 7438835
Alignment:
Q  412 tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    ||||||||||| |||| ||| ||||| ||||||  |||||| |||||| |||||||||||| |||||||||    
T  7438766 tgtcggtgtcaaacac-gacacatgtgcgacactaggacacgcctaattcaaggagtgtccgtgcttcata 7438835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 316 - 350
Target Start/End: Complemental strand, 10230168 - 10230134
Alignment:
Q  316 ctatgaaacacggacaccggacatgacacggacac 350  Q
    ||||||| |||||||||||||||||||||||||||    
T  10230168 ctatgaagcacggacaccggacatgacacggacac 10230134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 333 - 411
Target Start/End: Original strand, 15902795 - 15902873
Alignment:
Q  333 cggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 411  Q
    |||||| ||||| ||||| |||||||||||||  ||| |||| ||| ||||| |||||||| |||||||| ||| ||||    
T  15902795 cggacacgacacagacactgacatgccgacaccaataataatttgataaaatcacataatttagtgtaattatatgtgt 15902873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 371 - 413
Target Start/End: Original strand, 17307904 - 17307946
Alignment:
Q  371 taatatgagaaaataacataattcagtgtaatcataggtgttg 413  Q
    |||| ||||||||||||||||||||||||||| ||| ||||||    
T  17307904 taatttgagaaaataacataattcagtgtaattatatgtgttg 17307946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 423 - 481
Target Start/End: Complemental strand, 28943409 - 28943351
Alignment:
Q  423 gacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcat 481  Q
    ||||||||||||||||||| |||   ||||||||||||  |||||||||| ||||||||    
T  28943409 gacaccgacgcatgtccgaaaccataacacacctaatctgaggagtgtccgtgcttcat 28943351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 433 - 479
Target Start/End: Complemental strand, 40287352 - 40287306
Alignment:
Q  433 catgtccgacaccgggacacacctaatccaaggagtgtccatgcttc 479  Q
    |||||||||||||||||||  |||||||| |||||||||| ||||||    
T  40287352 catgtccgacaccgggacatgcctaatccgaggagtgtccgtgcttc 40287306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 481
Target Start/End: Complemental strand, 26033460 - 26033392
Alignment:
Q  412 tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcat 481  Q
    |||||||||||||||  ||| | ||||||| |||| |||||||||||||| |||||||||| || |||||    
T  26033460 tgtcggtgtcagacat-gacacgtgtccgataccgcgacacacctaatccgaggagtgtccgtgtttcat 26033392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 401
Target Start/End: Original strand, 41360910 - 41360951
Alignment:
Q  360 gacacggatattaatatgagaaaataacataattcagtgtaa 401  Q
    ||||| ||||||||| |||||||||||||||||||| |||||    
T  41360910 gacactgatattaatttgagaaaataacataattcaatgtaa 41360951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 376 - 426
Target Start/End: Original strand, 5835263 - 5835310
Alignment:
Q  376 tgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagaca 426  Q
    ||||||||||||||||||||||||||| ||| |   |||||||||||||||    
T  5835263 tgagaaaataacataattcagtgtaattatatg---tgtcggtgtcagaca 5835310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 323 - 363
Target Start/End: Complemental strand, 13557840 - 13557800
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgaca 363  Q
    |||||||||||||||||||||| ||||| |||| |||||||    
T  13557840 acacggacaccggacatgacacagacactgacacgccgaca 13557800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 380 - 482
Target Start/End: Original strand, 15680829 - 15680927
Alignment:
Q  380 aaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttc 479  Q
    ||||| |||||||| |||||||| ||| ||||   ||||||| ||||| ||| | |||||||||||| |||||  ||||| | |||||||||| ||||||    
T  15680829 aaaatcacataatttagtgtaattataagtgt---cggtgtcggacac-gacacgtgtccgacaccgagacacgtctaattcgaggagtgtccgtgcttc 15680924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 323 - 411
Target Start/End: Original strand, 17851394 - 17851482
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 411  Q
    |||||||||||||||| |||| ||| |||||||   ||| || | || |||| | ||||||| ||||||||||||||||| ||| ||||    
T  17851394 acacggacaccggacacgacatggataccgacacatcgataccgctaataattttagaaaatcacataattcagtgtaattatatgtgt 17851482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 323 - 411
Target Start/End: Complemental strand, 21141078 - 21140990
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 411  Q
    |||||||||||| ||| ||||||||| |||||| | ||||||   || |||| | ||||||| | |||||||||||| || ||||||||    
T  21141078 acacggacaccgtacacgacacggacgccgacacgtcgacaccactaataatttaagaaaatcatataattcagtgtgattataggtgt 21140990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 328 - 411
Target Start/End: Complemental strand, 22683844 - 22683763
Alignment:
Q  328 gacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 411  Q
    |||||| ||||  |||| ||||||||||  |||| ||||||| |||| |||||| || | ||||||||||| ||||||||||||    
T  22683844 gacaccagacacaacacagacaccgaca--ccgagacggataataatttgagaatatgatataattcagtgcaatcataggtgt 22683763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 323 - 411
Target Start/End: Complemental strand, 26329478 - 26329390
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 411  Q
    |||||||||| ||||| ||||| ||||| |||| |||||||  | || |||| ||||||||  ||| ||||||||||||| ||| ||||    
T  26329478 acacggacactggacacgacacagacactgacacgccgacatcgttaataatttgagaaaaacacacaattcagtgtaattatatgtgt 26329390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 3e-28; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 323 - 464
Target Start/End: Complemental strand, 14513270 - 14513127
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgt 420  Q
    |||||||||||| ||| || | ||| ||||||| ||| |||   ||| |||| ||||||||| ||||||||||| |||||||||| | |  |||||||||    
T  14513270 acacggacaccgaacacgatatggagaccgacacgccaacaaaaataataatttgagaaaattacataattcagcgtaatcatagatttggtgtcggtgt 14513171  T
Q  421 cagacaccgacgcatgtccgacaccgggacacacctaatccaag 464  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  14513170 cagacaccgacgcatgtccgacaccggaacacacctaatccaag 14513127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 323 - 482
Target Start/End: Original strand, 39820392 - 39820546
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtca 422  Q
    |||| ||||||||||| ||||| |||||||||| || ||| || ||| |||| ||||||||| | |||||| |||||||||||||||||     |||||     
T  39820392 acacagacaccggacacgacacagacaccgacacgctgacccgtataataatttgagaaaatgatataatttagtgtaatcataggtgt----cgtgtcg 39820487  T
Q  423 gacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    ||||||||||| ||||||||| |||||||| |||||||| || ||||||| |||||||||    
T  39820488 gacaccgacgcgtgtccgaca-cgggacacgcctaatccgagaagtgtccgtgcttcata 39820546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 325 - 482
Target Start/End: Original strand, 31556962 - 31557114
Alignment:
Q  325 acggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcaga 424  Q
    ||||||||||||||||||| || ||| |||| |||||||| | || |||| ||| ||||| ||||||||||||||||| | | || |   ||||||||||    
T  31556962 acggacaccggacatgacatggtcactgacacgccgacacagttaataatttga-aaaatcacataattcagtgtaattacaagttt---cggtgtcaga 31557057  T
Q  425 caccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    ||| ||| ||||||||||||| |||||| |||||||||||| |||||||||| |||||    
T  31557058 cac-gacacatgtccgacaccaggacacgcctaatccaaggtgtgtccatgcctcata 31557114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 327 - 482
Target Start/End: Complemental strand, 29510396 - 29510234
Alignment:
Q  327 ggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--------tgtcggt 418  Q
    |||||||||||| ||||||||||| |||| |||||||| | || |||| ||| ||||| ||| |||||||| |||| | | ||||        |||||||    
T  29510396 ggacaccggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcacaaaattcagtataattacaagtgtcggtgtagtgtcggt 29510297  T
Q  419 gtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    ||| ||||| ||||| ||||||||||||||||||||||||||| |||||||||| |||||||||    
T  29510296 gtcggacac-gacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 29510234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 358 - 482
Target Start/End: Complemental strand, 13009554 - 13009423
Alignment:
Q  358 ccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--------tgtcggtgtcagacaccgacgcatgtccgacaccggga 449  Q
    |||||||||||| |||| |||||||| || |||||| |||||||||||| ||||        ||| |||||||||||||||||| |||||||||| ||||    
T  13009554 ccgacacggataataatttgagaaaacaatataatttagtgtaatcataagtgtcgtgtcggtgtaggtgtcagacaccgacgcctgtccgacac-ggga 13009456  T
Q  450 cacacctaatccaaggagtgtccatgcttcata 482  Q
    ||| |||||||||||||| |||| |||||||||    
T  13009455 cacgcctaatccaaggagcgtccgtgcttcata 13009423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 323 - 481
Target Start/End: Original strand, 44067479 - 44067644
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcg---- 416  Q
    ||||||||||| ||||  |||| ||||| |||| ||||||||||||| |||| ||||||||| ||||||| ||||||||| ||| ||||  |||||        
T  44067479 acacggacaccagacaccacaccgacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcgtgtcggtgt 44067578  T
Q  417 -gtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcat 481  Q
     ||||| ||||| || || ||||||||||| |||||| |||||| | |||||||||| ||||||||    
T  44067579 cgtgtcggacactgatgcgtgtccgacaccaggacacgcctaattcgaggagtgtccgtgcttcat 44067644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 328 - 411
Target Start/End: Complemental strand, 28883969 - 28883886
Alignment:
Q  328 gacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 411  Q
    |||||| |||||| ||||||||| ||||||||| |||| ||| |||| ||||||||| ||||||||||||| ||||||||||||    
T  28883969 gacacctgacatgtcacggacactgacatgccgccacgaataataatttgagaaaatgacataattcagtggaatcataggtgt 28883886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 360 - 482
Target Start/End: Complemental strand, 30068087 - 30067969
Alignment:
Q  360 gacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaat 459  Q
    |||||||||| |||| ||||||||| |||||||||||| ||||| ||||||    | | ||| || |||||||  |||||||||| ||||||||||||||    
T  30068087 gacacggataataatttgagaaaatgacataattcagtataatcgtaggtg----ccgagtcggataccgacgtgtgtccgacactgggacacacctaat 30067992  T
Q  460 ccaaggagtgtccatgcttcata 482  Q
    || | |||||||| |||||||||    
T  30067991 ccgatgagtgtccgtgcttcata 30067969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 359 - 481
Target Start/End: Original strand, 1676711 - 1676829
Alignment:
Q  359 cgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaa 458  Q
    ||||||||||| |||| || |||||| ||||| || |||||||||||||||||     ||||| ||||||||| |||||| |||||| | ||||||||||    
T  1676711 cgacacggataataatttgtgaaaatgacatattttagtgtaatcataggtgt----cgtgtcggacaccgacacatgtctgacacctgcacacacctaa 1676806  T
Q  459 tccaaggagtgtccatgcttcat 481  Q
    ||| | | |||||| ||||||||    
T  1676807 tccgaagggtgtccgtgcttcat 1676829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 358 - 482
Target Start/End: Original strand, 40063949 - 40064080
Alignment:
Q  358 ccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgtcagacac-----cgacgcatgtccgacaccgggac 450  Q
    |||||||  ||| |||| ||||||||| |||||||||| |||||||||||| ||  ||||||||||  ||||     |||||  ||||||||||||||||    
T  40063949 ccgacaccaataataatttgagaaaatgacataattcattgtaatcataggcgtcgtgtcggtgtccaacacgtcgccgacgtgtgtccgacaccgggac 40064048  T
Q  451 acacctaatccaaggagtgtccatgcttcata 482  Q
    ||| ||||||| |||||||||| |||| ||||    
T  40064049 acatctaatccgaggagtgtccgtgctacata 40064080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 345 - 484
Target Start/End: Original strand, 3658132 - 3658273
Alignment:
Q  345 ggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgtcagacac-cgacgcatgtccga 441  Q
    |||||||||||   ||||||||||| |||| |||||||||||  || ||||||||||||||||||||  ||| | |||| ||||| || || ||||||||    
T  3658132 ggacaccgacacatcgacacggataataatttgagaaaataatgtagttcagtgtaatcataggtgtcgtgttgatgtcggacacgcgtcg-atgtccga 3658230  T
Q  442 caccgggacacacctaatccaaggagtgtccatgcttcatact 484  Q
    || |  ||||| |||||| | |||||||||| |||||||||||    
T  3658231 catcaagacacgcctaattcgaggagtgtccgtgcttcatact 3658273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 402
Target Start/End: Complemental strand, 37283902 - 37283827
Alignment:
Q  327 ggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 402  Q
    ||||||| |||||||||||||||| ||||||| | ||| | || |||| ||||||||| |||||||||||||||||    
T  37283902 ggacaccagacatgacacggacactgacatgcgggcaccgctaataatctgagaaaatcacataattcagtgtaat 37283827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 17751704 - 17751774
Alignment:
Q  412 tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||||||||| ||||| |||||||  ||||||||||||||| |||||||| ||||||||||  ||||||||    
T  17751704 tgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatccgaggagtgtccgcgcttcata 17751774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 17760691 - 17760761
Alignment:
Q  412 tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||||||||| ||||| |||||||  ||||||||||||||| |||||||| ||||||||||  ||||||||    
T  17760691 tgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatccgaggagtgtccgcgcttcata 17760761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 323 - 482
Target Start/End: Original strand, 22651939 - 22652105
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--------tgt 414  Q
    |||| ||||||||||| ||||||||||| |||| |||||||| | || |||| ||| ||||| |||||||||| | |||| | | ||||        |||    
T  22651939 acactgacaccggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcacataattcaatataattacaagtgtcggtgtcgtgt 22652038  T
Q  415 cggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    ||||||| |||| ||||   ||||||||||||||||||  ||||||| |||||||||| |||||||||    
T  22652039 cggtgtcggaca-cgacatgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcata 22652105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 325 - 411
Target Start/End: Complemental strand, 24362296 - 24362210
Alignment:
Q  325 acggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 411  Q
    |||||||||||| | ||||| |||||||||| |||||||| | || |||| ||||| ||| ||||||||||||||||| ||| ||||    
T  24362296 acggacaccggatacgacacagacaccgacacgccgacaccgctaataatttgagagaatcacataattcagtgtaattatatgtgt 24362210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 322 - 481
Target Start/End: Complemental strand, 926885 - 926730
Alignment:
Q  322 aacacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtc 421  Q
    ||||||||||||||||| ||||||||||| |||| ||| ||||   || |||| |||||||||  |||  ||||||||||| ||| |   ||||||||||    
T  926885 aacacggacaccggacacgacacggacactgacacgccaacactcctaataatttgagaaaatctcattgttcagtgtaattataag---tgtcggtgtc 926789  T
Q  422 agacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcat 481  Q
     |||  |||| | |||||||||||||||||  | | |||| |||||||||| ||||||||    
T  926788 ggac-gcgacacgtgtccgacaccgggacatgctttatccgaggagtgtccgtgcttcat 926730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 379 - 482
Target Start/End: Original strand, 2035758 - 2035866
Alignment:
Q  379 gaaaataacataattcagtgtaatcataggtgttgt-------cggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtc 471  Q
    ||||||||||| |||||||||||| |||||||| ||       |||||||||||  |||||| ||||||||||||||| ||||||||||| || || |||    
T  2035758 gaaaataacattattcagtgtaattataggtgtcgtatcgtgccggtgtcagac--cgacgcgtgtccgacaccgggagacacctaatccgagtagcgtc 2035855  T
Q  472 catgcttcata 482  Q
    | |||||||||    
T  2035856 cgtgcttcata 2035866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 346 - 481
Target Start/End: Complemental strand, 20679468 - 20679337
Alignment:
Q  346 gacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacacc 445  Q
    ||||| |||||| ||||||   || |||| ||||||||| ||||| ||||||||||| ||| ||||   ||||||||||| |  || | |||||||||||    
T  20679468 gacactgacatgtcgacacccctaataatttgagaaaatcacatagttcagtgtaattataagtgt---cggtgtcagacgca-acacgtgtccgacacc 20679373  T
Q  446 gggacacacctaatccaaggagtgtccatgcttcat 481  Q
    ||||||| ||| | || |||||||||||||||||||    
T  20679372 gggacacgccttaaccgaggagtgtccatgcttcat 20679337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 430 - 482
Target Start/End: Original strand, 13397617 - 13397669
Alignment:
Q  430 acgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    ||||||||||||||||| ||||| |||||| |||||||||||| |||||||||    
T  13397617 acgcatgtccgacaccgagacacgcctaattcaaggagtgtccgtgcttcata 13397669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 482
Target Start/End: Complemental strand, 36450833 - 36450695
Alignment:
Q  340 gacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtcc 439  Q
    ||||||||||| |||| ||||||||   || |||| ||| ||||| ||| ||||||||||||| | | |||| |   ||||| ||||| ||||| |||||    
T  36450833 gacacggacactgacacgccgacacaactaataatttgaaaaaatcacagaattcagtgtaattacaagtgtag---gtgtcggacac-gacgcgtgtcc 36450738  T
Q  440 gacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||||| |||||| |||||||| |||||||||  |||||||||    
T  36450737 gacaccaggacacgcctaatccgaggagtgtctgtgcttcata 36450695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 358 - 482
Target Start/End: Complemental strand, 35431201 - 35431081
Alignment:
Q  358 ccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacaccta 457  Q
    |||| ||||||| |||| ||||||||| ||||| || |||||||||||||||||     ||||| |||| ||| |||| ||| ||||| |||||| ||||    
T  35431201 ccgaaacggataataatttgagaaaatgacatattttagtgtaatcataggtgt----cgtgtcggacatcgatgcatatccaacaccaggacaccccta 35431106  T
Q  458 atccaaggagtgtccatgcttcata 482  Q
    ||||||  ||||||  |||||||||    
T  35431105 atccaaaaagtgtctgtgcttcata 35431081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 423 - 482
Target Start/End: Complemental strand, 38487217 - 38487158
Alignment:
Q  423 gacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    ||||||||||| ||||||||||| |||||||| |||||| |||||||||  |||||||||    
T  38487217 gacaccgacgcgtgtccgacacccggacacacataatccgaggagtgtctgtgcttcata 38487158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 428 - 482
Target Start/End: Complemental strand, 4673409 - 4673355
Alignment:
Q  428 cgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||||||| ||||||||||| |||| ||||||||||||||||||  |||||||||    
T  4673409 cgacgcatatccgacaccggaacacgcctaatccaaggagtgtctgtgcttcata 4673355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 440 - 482
Target Start/End: Complemental strand, 34127215 - 34127173
Alignment:
Q  440 gacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||||| |||||||||||||||||||||||||| |||||||||    
T  34127215 gacacctggacacacctaatccaaggagtgtccgtgcttcata 34127173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 481
Target Start/End: Original strand, 3025562 - 3025668
Alignment:
Q  371 taatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgt 470  Q
    |||| ||||||||| ||||||||||||||||| |||||   |||| ||||| |||| |||| | |||| ||||| | |||||  ||||||| ||||||||    
T  3025562 taatttgagaaaatcacataattcagtgtaattatagg---tgtcagtgtcggaca-cgacacgtgtctgacactgtgacacggctaatccgaggagtgt 3025657  T
Q  471 ccatgcttcat 481  Q
    || ||||||||    
T  3025658 ccgtgcttcat 3025668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 430 - 482
Target Start/End: Original strand, 13403172 - 13403224
Alignment:
Q  430 acgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    ||||||||||||||||| ||||| | |||| |||||||||||| |||||||||    
T  13403172 acgcatgtccgacaccgagacacgcttaattcaaggagtgtccgtgcttcata 13403224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 395
Target Start/End: Complemental strand, 13437056 - 13436988
Alignment:
Q  327 ggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattca 395  Q
    ||||||||||||||||| |||||| |||| |||||||| | || |||| ||| ||||| ||||||||||    
T  13437056 ggacaccggacatgacatggacactgacacgccgacacagctaataatttgaaaaaatcacataattca 13436988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 460
Target Start/End: Complemental strand, 14659706 - 14659658
Alignment:
Q  412 tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatc 460  Q
    ||||||||||||||||| |||| ||||| |||||| |||||||||||||    
T  14659706 tgtcggtgtcagacaccaacgcgtgtccaacaccgagacacacctaatc 14659658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 461
Target Start/End: Original strand, 18646183 - 18646270
Alignment:
Q  371 taatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatcc 461  Q
    |||| ||| ||||| |||| ||||||||||||||||  |||||   ||||| ||||||||||||||||| | |  ||||||||||||||||    
T  18646183 taatttgaaaaaatgacatgattcagtgtaatcatatatgttg---gtgtcggacaccgacgcatgtccaataatgggacacacctaatcc 18646270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 366 - 413
Target Start/End: Original strand, 3508058 - 3508105
Alignment:
Q  366 gatattaatatgagaaaataacataattcagtgtaatcataggtgttg 413  Q
    |||| |||| |||||||||||||||||||| |||||||||| ||||||    
T  3508058 gataataatttgagaaaataacataattcaatgtaatcatatgtgttg 3508105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 435 - 482
Target Start/End: Complemental strand, 8798841 - 8798794
Alignment:
Q  435 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    ||||||||||||| |||| ||||||||||||||||||||  |||||||    
T  8798841 tgtccgacaccggaacacgcctaatccaaggagtgtccagacttcata 8798794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 439 - 482
Target Start/End: Complemental strand, 13436954 - 13436911
Alignment:
Q  439 cgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||||||||||||| ||||||||||||||||||  |||||||||    
T  13436954 cgacaccgggacacgcctaatccaaggagtgtctgtgcttcata 13436911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 412 - 482
Target Start/End: Complemental strand, 3951546 - 3951477
Alignment:
Q  412 tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||||||||||||||| ||| | |||| ||||| || |||| ||||||||||||||| ||| |||||||||    
T  3951546 tgtcggtgtcagacac-gacacgtgtctgacacgggaacacgcctaatccaaggagtttccgtgcttcata 3951477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 428 - 482
Target Start/End: Complemental strand, 6065641 - 6065587
Alignment:
Q  428 cgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||| ||||||||||||||| |||| | |||| |||||||||||| |||||||||    
T  6065641 cgacacatgtccgacaccggaacacgcataattcaaggagtgtccgtgcttcata 6065587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 323 - 482
Target Start/End: Complemental strand, 24413656 - 24413500
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaa-tatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtc 421  Q
    ||||||||||| |||| ||||||||||| ||||| | ||||| | || ||| | ||||||||  ||||||||||| ||||| ||| |   |||| |||||    
T  24413656 acacggacaccagacacgacacggacactgacatactgacaccgttaataattttgagaaaaatacataattcagggtaattataag---tgtcagtgtc 24413560  T
Q  422 agacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
     |||| ||| || ||||| ||| ||||||||  ||||||| || ||||||| |||||||||    
T  24413559 ggaca-cgatgcgtgtccaacagcgggacacgtctaatccgagaagtgtccgtgcttcata 24413500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 412 - 482
Target Start/End: Complemental strand, 34451031 - 34450962
Alignment:
Q  412 tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||||||||| ||||| ||| | |||| ||||| ||||||| ||| ||||||||||||||| |||||||||    
T  34451031 tgtcggtgtcggacac-gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 34450962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 402
Target Start/End: Complemental strand, 4673519 - 4673442
Alignment:
Q  325 acggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 402  Q
    ||||||| |||||| ||||| ||||| |||| |||||||| |||| |||| ||| ||||| | | |||||||||||||    
T  4673519 acggacatcggacacgacacagacactgacacgccgacacagataataatttgaaaaaatcataaaattcagtgtaat 4673442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 393
Target Start/End: Complemental strand, 10497899 - 10497842
Alignment:
Q  336 acatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataatt 393  Q
    ||||||||| ||||| |||| |||||||||||||  | | ||||||||||||||||||    
T  10497899 acatgacactgacacagacacgccgacacggataaaattttgagaaaataacataatt 10497842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 482
Target Start/End: Original strand, 14134710 - 14134817
Alignment:
Q  371 taatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgt 470  Q
    |||| ||||||||| ||||||||||||||||| |||     ||||||||||| ||| |||| | |||||| |||| |||||| |||||| | ||||||||    
T  14134710 taatttgagaaaatcacataattcagtgtaattata---tatgtcggtgtcaaaca-cgacacgtgtccgtcaccaggacacgcctaattcgaggagtgt 14134805  T
Q  471 ccatgcttcata 482  Q
    || || ||||||    
T  14134806 ccgtgtttcata 14134817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 437 - 482
Target Start/End: Complemental strand, 15816104 - 15816059
Alignment:
Q  437 tccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||||||||||||||| |||||||| || ||||||| |||||||||    
T  15816104 tccgacaccgggacacgcctaatccgagaagtgtccgtgcttcata 15816059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 482
Target Start/End: Complemental strand, 16641951 - 16641910
Alignment:
Q  441 acaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    ||||||||||||||||||||| |||||||||  |||||||||    
T  16641951 acaccgggacacacctaatccgaggagtgtctgtgcttcata 16641910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 402
Target Start/End: Original strand, 20873042 - 20873111
Alignment:
Q  333 cggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 402  Q
    |||||| ||||||||||| |||| |||||||  |||| |||| ||| ||||| |||||||| ||||||||    
T  20873042 cggacacgacacggacactgacacgccgacatagataataatttgaaaaaatcacataatttagtgtaat 20873111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 322 - 355
Target Start/End: Complemental strand, 26609848 - 26609815
Alignment:
Q  322 aacacggacaccggacatgacacggacaccgaca 355  Q
    |||||||||||| |||||||||||||||||||||    
T  26609848 aacacggacaccagacatgacacggacaccgaca 26609815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 322 - 411
Target Start/End: Complemental strand, 28385091 - 28385002
Alignment:
Q  322 aacacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 411  Q
    |||||||| || | ||| ||||||||||| ||||| ||||||| | || ||||||||  ||||  |||||||||||||||| ||| ||||    
T  28385091 aacacggatactgaacacgacacggacactgacataccgacaccgttaataatatgaataaatctcataattcagtgtaattatatgtgt 28385002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 358 - 402
Target Start/End: Original strand, 4611532 - 4611576
Alignment:
Q  358 ccgacacggatattaatatgagaaaataacataattcagtgtaat 402  Q
    ||||||| | || |||| |||||||||||||||||||||||||||    
T  4611532 ccgacaccgctaataatttgagaaaataacataattcagtgtaat 4611576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 428 - 468
Target Start/End: Complemental strand, 14639785 - 14639745
Alignment:
Q  428 cgacgcatgtccgacaccgggacacacctaatccaaggagt 468  Q
    |||| |||||||||||||||||||  |||||||||||||||    
T  14639785 cgacacatgtccgacaccgggacatgcctaatccaaggagt 14639745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 441 - 481
Target Start/End: Original strand, 16987990 - 16988030
Alignment:
Q  441 acaccgggacacacctaatccaaggagtgtccatgcttcat 481  Q
    |||||||||||| |||||||| |||||||||| ||||||||    
T  16987990 acaccgggacacccctaatccgaggagtgtccgtgcttcat 16988030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 435 - 471
Target Start/End: Complemental strand, 22943337 - 22943301
Alignment:
Q  435 tgtccgacaccgggacacacctaatccaaggagtgtc 471  Q
    |||||||||||||||||| |||||||| |||||||||    
T  22943337 tgtccgacaccgggacacgcctaatccgaggagtgtc 22943301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 343 - 411
Target Start/End: Original strand, 34897068 - 34897136
Alignment:
Q  343 acggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 411  Q
    |||||||| |||| | |||||| | || |||| ||||||||| ||||||||||||||||| ||| ||||    
T  34897068 acggacacagacacgtcgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgt 34897136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 323 - 355
Target Start/End: Complemental strand, 43737909 - 43737877
Alignment:
Q  323 acacggacaccggacatgacacggacaccgaca 355  Q
    |||||||||||||||| ||||||||||||||||    
T  43737909 acacggacaccggacacgacacggacaccgaca 43737877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 1e-27; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 323 - 482
Target Start/End: Complemental strand, 11308099 - 11307935
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--------tgt 414  Q
    |||||||||||||||||| |||| ||||||| || |||||||||||| |||| ||| ||||| ||||||||||||||||||||||||||        |||    
T  11308099 acacggacaccggacatggcacgaacaccgatataccgacacggata-taatttgaaaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgt 11308001  T
Q  415 cggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    ||||||  ||||||||||| |||||||||||  || |||| |||||| |||||||||| |||||||||    
T  11308000 cggtgttggacaccgacgcgtgtccgacacc--gaaacacttaatccgaggagtgtccgtgcttcata 11307935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 322 - 482
Target Start/End: Complemental strand, 23354749 - 23354582
Alignment:
Q  322 aacacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--------tg 413  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||| |||| ||||||||| | |||||| |||||||||||||||||        ||    
T  23354749 aacacggacaccggacatgacacggacaccgacatgctgacacagataataatttgagaaaatgatataatttagtgtaatcataggtgtcgtgtcggtg 23354650  T
Q  414 tcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||| ||| |||||||||   |||| |||| |||||||| |||||||| |||||||||| || ||||||    
T  23354649 tcggggtcggacaccgaccggtgtctgaca-cgggacacgcctaatccgaggagtgtccgtggttcata 23354582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 325 - 481
Target Start/End: Complemental strand, 23355089 - 23354926
Alignment:
Q  325 acggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgtc- 421  Q
    |||||||| ||||||||||||||||||||||||| ||||| |||| |||| ||||||||| | |||||| |||| ||||||||||||  ||||||||||     
T  23355089 acggacacgggacatgacacggacaccgacatgctgacacagataataatttgagaaaatgatataatttagtgcaatcataggtgtcatgtcggtgtcg 23354990  T
Q  422 -----agacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcat 481  Q
          ||||||||| | |||| |||| |||||||| |||||||| |||||||||| ||||||||    
T  23354989 gggttggacaccgacccgtgtctgaca-cgggacacgcctaatccgaggagtgtccttgcttcat 23354926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 333 - 482
Target Start/End: Complemental strand, 18841099 - 18840954
Alignment:
Q  333 cggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacg 432  Q
    |||||| |||| |||||| |||| || |||||   || |||| ||| ||||| |||||||| |||||||| | | ||||   ||||||||||||| |||     
T  18841099 cggacacgacatggacactgacacgctgacacaactaataatttgaaaaaattacataattaagtgtaattacaagtgt---cggtgtcagacac-gaca 18841004  T
Q  433 catgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  18841003 catgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 18840954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 366 - 482
Target Start/End: Complemental strand, 34007044 - 34006931
Alignment:
Q  366 gatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaagg 465  Q
    |||| |||| ||||||| | ||||||||||||||||||||||||||   ||||||  |||||| |  | |||| |||||||| ||||||||||| |||||    
T  34007044 gataataatttgagaaattgacataattcagtgtaatcataggtgt---cggtgtgggacacctattcgtgtctgacaccggaacacacctaattcaagg 34006948  T
Q  466 agtgtccatgcttcata 482  Q
    ||||||| |||||||||    
T  34006947 agtgtccgtgcttcata 34006931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 314 - 414
Target Start/End: Original strand, 12748644 - 12748738
Alignment:
Q  314 agctatgaaacacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttg 413  Q
    ||||||||||||| ||||||||||| |||||||||||      || |||| ||||| |||| ||||||||| ||||| ||||||||||||||||||||||    
T  12748644 agctatgaaacacagacaccggacacgacacggacac------gctgacatggataataatttgagaaaatgacatagttcagtgtaatcataggtgttg 12748737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 376 - 482
Target Start/End: Complemental strand, 18889634 - 18889520
Alignment:
Q  376 tgagaaaataacataattcagtgtaatcataggtgt--------tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggag 467  Q
    ||||||||| ||||||||||||||||||||| ||||        |||  ||||| ||||||||||||||||||||||| |||||||||||| ||||| ||    
T  18889634 tgagaaaatcacataattcagtgtaatcatatgtgtcggtgtcttgtttgtgtcggacaccgacgcatgtccgacacccggacacacctaacccaagtag 18889535  T
Q  468 tgtccatgcttcata 482  Q
    ||||  |||||||||    
T  18889534 tgtctctgcttcata 18889520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 328 - 481
Target Start/End: Complemental strand, 2438808 - 2438661
Alignment:
Q  328 gacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacac 427  Q
    |||||||||||  |||||||||| |||  || ||||| | || |||| | | ||||| ||||||||||||||||| | | |   |||||||||| ||||     
T  2438808 gacaccggacaaaacacggacactgac--gctgacacagctaataatttcaaaaaatcacataattcagtgtaattacaag---tgtcggtgtcggaca- 2438715  T
Q  428 cgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcat 481  Q
    |||| |||||||||||||||||||| |||||||| |||||||||| ||||||||    
T  2438714 cgacacatgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 2438661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 316 - 402
Target Start/End: Complemental strand, 30404952 - 30404867
Alignment:
Q  316 ctatgaaacacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 402  Q
    ||||||| |||||| || ||||||||||||||||| |||| |||||||||| || |||| ||| ||||| |||||||||||||||||    
T  30404952 ctatgaagcacggatac-ggacatgacacggacactgacacgccgacacggttaataatttgaaaaaatcacataattcagtgtaat 30404867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 342 - 423
Target Start/End: Original strand, 25544465 - 25544546
Alignment:
Q  342 cacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgtcag 423  Q
    ||||||||||||||  |||||||| ||| |||| ||||||||| | ||||||||||||||||||||||||  ||||||||||||    
T  25544465 cacggacaccgaca--ccgacacgtataataatttgagaaaatgatataattcagtgtaatcataggtgtcgtgtcggtgtcag 25544546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 37419803 - 37419872
Alignment:
Q  412 tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||||||||| ||||| || || |||||||||||||||||| |||||||| |||||||||| |||||||||    
T  37419803 tgtcggtgtcggacac-gatgcgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcata 37419872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 323 - 482
Target Start/End: Original strand, 15972836 - 15972991
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtca 422  Q
    |||| |||||| || | ||||||||||| |||| ||||||||   || |||| ||| ||||| ||| ||||||||||||| | | |   ||||||||||     
T  15972836 acacagacaccagatacgacacggacactgacacgccgacacaattaataatttgaaaaaattacacaattcagtgtaattacaag---tgtcggtgtcg 15972932  T
Q  423 gacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||| |||| | |||||||| |||||||||||||||||| | || ||||| |||||||||    
T  15972933 gaca-cgacacgtgtccgacgccgggacacacctaatccgaagaatgtccgtgcttcata 15972991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 357 - 471
Target Start/End: Original strand, 24011033 - 24011149
Alignment:
Q  357 gccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgtcagacaccgacgcatgtccgacaccgggacacac 454  Q
    |||||||  |||| |||| ||||||||| |||||||| |||||||||||||||||   ||||||||| || || || || |||||||||||  |||||||    
T  24011033 gccgacattgataataatttgagaaaatgacataatttagtgtaatcataggtgtcgcgtcggtgtctgatacggatgcgtgtccgacaccaagacacac 24011132  T
Q  455 ctaatccaaggagtgtc 471  Q
     |||||| | |||||||    
T  24011133 ataatccgaagagtgtc 24011149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 411
Target Start/End: Original strand, 21616737 - 21616813
Alignment:
Q  335 gacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 411  Q
    |||| ||||||||||| |||| |||||||| | || |||| ||||||||| ||||||||||||||||| ||| ||||    
T  21616737 gacacgacacggacacggacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgt 21616813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 323 - 402
Target Start/End: Original strand, 18276484 - 18276563
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 402  Q
    |||||||||||||||| || || ||||| || |||||||||| | || |||| ||||||||| || ||||||||||||||    
T  18276484 acacggacaccggacacgatacagacactgatatgccgacaccgctaataatttgagaaaatcacttaattcagtgtaat 18276563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 351 - 410
Target Start/End: Original strand, 19573969 - 19574028
Alignment:
Q  351 cgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtg 410  Q
    ||||| |||||||| |||| |||| | ||||||||||||||||||||||||| |||||||    
T  19573969 cgacacgccgacaccgataataatttaagaaaataacataattcagtgtaattataggtg 19574028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 357 - 411
Target Start/End: Complemental strand, 10535821 - 10535767
Alignment:
Q  357 gccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 411  Q
    |||||||| |||| |||| ||||||||| ||||||||||||||||||||| ||||    
T  10535821 gccgacaccgataataatttgagaaaatgacataattcagtgtaatcataagtgt 10535767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 435 - 481
Target Start/End: Original strand, 19942336 - 19942382
Alignment:
Q  435 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttcat 481  Q
    |||| ||||||||||||| |||||||| |||||||||||||||||||    
T  19942336 tgtctgacaccgggacacgcctaatccgaggagtgtccatgcttcat 19942382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 333 - 411
Target Start/End: Original strand, 23717999 - 23718077
Alignment:
Q  333 cggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 411  Q
    |||||||||||||||||| ||||  ||||||| | || |||| ||||||| | ||||||||||||||||| ||| ||||    
T  23717999 cggacatgacacggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgt 23718077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 333 - 411
Target Start/End: Original strand, 24105671 - 24105749
Alignment:
Q  333 cggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 411  Q
    |||||||||||||||||| ||||  ||||||| | || |||| ||||||| | ||||||||||||||||| ||| ||||    
T  24105671 cggacatgacacggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgt 24105749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 37497169 - 37497239
Alignment:
Q  412 tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||||||||||||||||||| ||||| || ||||||||||   ||||||| || ||||||| |||||||||    
T  37497169 tgtcggtgtcagacaccgacacatgttcggcaccgggacatggctaatcccagaagtgtccgtgcttcata 37497239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 435 - 481
Target Start/End: Complemental strand, 42832280 - 42832234
Alignment:
Q  435 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttcat 481  Q
    |||||||| ||||||||| ||||||||||||||||||| ||||||||    
T  42832280 tgtccgactccgggacacgcctaatccaaggagtgtccttgcttcat 42832234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 321 - 402
Target Start/End: Original strand, 4332887 - 4332968
Alignment:
Q  321 aaacacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 402  Q
    |||||||||||||||||| | ||| || ||  |||||||||||| |||| |||| || |||||| |||||||||| ||||||    
T  4332887 aaacacggacaccggacacggcacagatacttacatgccgacactgataataatttgggaaaatcacataattcaatgtaat 4332968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 435 - 472
Target Start/End: Original strand, 21624333 - 21624370
Alignment:
Q  435 tgtccgacaccgggacacacctaatccaaggagtgtcc 472  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  21624333 tgtccgacagcgggacacacctaatccaaggagtgtcc 21624370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 434 - 482
Target Start/End: Original strand, 18622672 - 18622720
Alignment:
Q  434 atgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||||| |||||||||||||| |||||| |||||||||| |||||||||    
T  18622672 atgtcctacaccgggacacacttaatccgaggagtgtccgtgcttcata 18622720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 484
Target Start/End: Original strand, 28596518 - 28596589
Alignment:
Q  412 tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcatact 484  Q
    |||||||||| ||||| ||| | ||||||||||  |||||| |||||||| |||||||||| |||||||||||    
T  28596518 tgtcggtgtcggacac-gacacgtgtccgacactcggacactcctaatccgaggagtgtccgtgcttcatact 28596589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 316 - 440
Target Start/End: Original strand, 896169 - 896288
Alignment:
Q  316 ctatgaaacacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtc 415  Q
    ||||||| || |||||||||||| |||||  |||| |||| |||||||| | || || | ||||||||| ||||| |||| |||||||||| |   ||||    
T  896169 ctatgaagcatggacaccggacacgacac--acactgacacgccgacactgctaatagtttgagaaaatcacatatttcaatgtaatcatatg---tgtc 896263  T
Q  416 ggtgtcagacaccgacgcatgtccg 440  Q
    || ||| |||||| |||||||||||    
T  896264 ggcgtcggacaccaacgcatgtccg 896288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 464
Target Start/End: Original strand, 5367203 - 5367292
Alignment:
Q  371 taatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaag 464  Q
    |||| |||| |||| ||||||||||||||||| ||| |   |||||||||| |||| |||| ||| |||||| ||||||||| |||||||||||    
T  5367203 taatttgaggaaatcacataattcagtgtaattatatg---tgtcggtgtcggaca-cgacacatatccgactccgggacacgcctaatccaag 5367292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 411
Target Start/End: Original strand, 6249182 - 6249250
Alignment:
Q  341 acacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 411  Q
    |||||||||| ||||||  ||||| |||| |||| ||||||||||  ||||||||||||| ||||||||||    
T  6249182 acacggacacagacatg--gacaccgataataatttgagaaaatattataattcagtgtattcataggtgt 6249250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 414
Target Start/End: Original strand, 30563408 - 30563463
Alignment:
Q  359 cgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgt 414  Q
    ||||||||||| |||| ||||||||| |||||||||| |||||  |||||||||||    
T  30563408 cgacacggataataatttgagaaaatgacataattcaatgtaactataggtgttgt 30563463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 402
Target Start/End: Original strand, 31284011 - 31284090
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 402  Q
    ||||||||||||||||| ||||| ||||  ||| |||||||| | || |||| ||||||||| ||||||| || ||||||    
T  31284011 acacggacaccggacataacacgtacacttacacgccgacactgctaataatttgagaaaatcacataatccattgtaat 31284090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 435 - 482
Target Start/End: Complemental strand, 38117147 - 38117100
Alignment:
Q  435 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||||||||||||||||| |||||||| ||| |||||| |||||||||    
T  38117147 tgtccgacaccgggacacgcctaatccgaggggtgtccgtgcttcata 38117100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 435 - 482
Target Start/End: Original strand, 44860402 - 44860449
Alignment:
Q  435 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    ||||||||| ||||||||||||||| | |||||||||| |||||||||    
T  44860402 tgtccgacatcgggacacacctaattcgaggagtgtccgtgcttcata 44860449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 416 - 482
Target Start/End: Complemental strand, 6180857 - 6180791
Alignment:
Q  416 ggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||||| ||||||||| ||||||||| || | |||||||||||||  |||||| ||| |||||||||    
T  6180857 ggtgtcggacaccgactcatgtccgatactgagacacacctaatctgaggagtttccgtgcttcata 6180791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 374 - 404
Target Start/End: Original strand, 11439809 - 11439839
Alignment:
Q  374 tatgagaaaataacataattcagtgtaatca 404  Q
    |||||||||||||||||||||||||||||||    
T  11439809 tatgagaaaataacataattcagtgtaatca 11439839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 435 - 481
Target Start/End: Original strand, 15657946 - 15657992
Alignment:
Q  435 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttcat 481  Q
    |||||||| ||||||||| |||| ||| |||||||||||||||||||    
T  15657946 tgtccgacgccgggacacgcctagtccgaggagtgtccatgcttcat 15657992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 328 - 402
Target Start/End: Complemental strand, 21782909 - 21782835
Alignment:
Q  328 gacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 402  Q
    ||||| ||||| |||||  |||| |||| |||||||| | || |||| ||||||||| |||||||||||||||||    
T  21782909 gacactggacacgacacaaacactgacacgccgacactgctaataatttgagaaaatcacataattcagtgtaat 21782835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 333 - 411
Target Start/End: Original strand, 23406841 - 23406919
Alignment:
Q  333 cggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 411  Q
    ||||||||||| ||||||| ||||| || | | |||| |||| | ||||||| |||||||||||  |||||||||||||    
T  23406841 cggacatgacatggacaccaacatgtcgtcgcagataataatttaagaaaattacataattcagaataatcataggtgt 23406919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 24009344 - 24009413
Alignment:
Q  412 tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||||||||| ||||| ||| | |||| ||||| ||||||| ||| ||||||||||||||| |||||||||    
T  24009344 tgtcggtgtcggacac-gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 24009413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 482
Target Start/End: Original strand, 19980744 - 19980793
Alignment:
Q  433 catgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    ||||||||||| || |||||||||||||| || ||||| |||||||||||    
T  19980744 catgtccgacatcgagacacacctaatccgagaagtgttcatgcttcata 19980793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 478
Target Start/End: Original strand, 27460111 - 27460148
Alignment:
Q  441 acaccgggacacacctaatccaaggagtgtccatgctt 478  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  27460111 acaccgggacacgtctaatccaaggagtgtccatgctt 27460148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 7e-26; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 361 - 482
Target Start/End: Complemental strand, 6936458 - 6936335
Alignment:
Q  361 acacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaa 458  Q
    ||||||||| |||| ||||||||| |||||||| |||||||||||||||||  |||| ||||| ||||||||||||| ||||||||| | | || | |||    
T  6936458 acacggataataatctgagaaaatgacataattaagtgtaatcataggtgtcgtgtctgtgtcggacaccgacgcatatccgacaccagaatacccttaa 6936359  T
Q  459 tccaaggagtgtccatgcttcata 482  Q
    ||| ||||||||||||||||||||    
T  6936358 tccgaggagtgtccatgcttcata 6936335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 328 - 482
Target Start/End: Complemental strand, 20157441 - 20157285
Alignment:
Q  328 gacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt---tgtcggtgtcaga 424  Q
    ||||||||||| ||||||| ||| ||||   |||||| | || |||| ||||||||| ||||||||||||||||||||| ||||   |||| ||||| ||    
T  20157441 gacaccggacacgacacgggcactgacacatcgacaccgctaataatgtgagaaaatcacataattcagtgtaatcatatgtgtcggtgtc-gtgtccga 20157343  T
Q  425 caccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    ||||||||| |||||||||||| ||||||||||||   |||||| ||| |||||||||    
T  20157342 caccgacgcgtgtccgacaccgagacacacctaatttgaggagtatccgtgcttcata 20157285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 358 - 482
Target Start/End: Complemental strand, 40747834 - 40747708
Alignment:
Q  358 ccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacc 455  Q
    |||||||||||| |||| ||||||||| |||||||||| |||||| ||||||||  ||| |||||| ||||||||  ||||||| |||| ||||||| ||    
T  40747834 ccgacacggataataatttgagaaaatgacataattcaatgtaattataggtgtcatgttggtgtcggacaccgatccatgtcccacacagggacacccc 40747735  T
Q  456 taatccaaggagtgtccatgcttcata 482  Q
    |||||| ||||| |||| |||||||||    
T  40747734 taatccgaggagcgtccgtgcttcata 40747708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 360 - 444
Target Start/End: Complemental strand, 42005006 - 42004920
Alignment:
Q  360 gacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgtcagacaccgacgcatgtccgacac 444  Q
    |||||||||| |||| ||||||||| |||||||| |||||||||||||||||  |||||||||| ||||||||||||||||||||||    
T  42005006 gacacggataataatttgagaaaatgacataatttagtgtaatcataggtgttgtgtcggtgtcggacaccgacgcatgtccgacac 42004920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 324 - 482
Target Start/End: Complemental strand, 2896216 - 2896062
Alignment:
Q  324 cacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcag 423  Q
    |||||||| ||||||  |||||||||| |||| |||||||| | || |||| ||||||||| |||||||||||||||   |||  |||   |||||||||    
T  2896216 cacggacaacggacacaacacggacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtagctatatatgt---cggtgtcag 2896120  T
Q  424 acaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||| |||   ||||||| |||||||||||||||||||||| |||||||||| ||||||    
T  2896119 acac-gacatgtgtccgagaccgggacacacctaatccaagaagtgtccatgtttcata 2896062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 323 - 482
Target Start/End: Complemental strand, 22794174 - 22794019
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtca 422  Q
    ||||||| |||||| | ||||  ||||| |||| | | ||||||||| |||| ||| ||||| ||||||| ||||||||| |||||||| ||    |||     
T  22794174 acacggataccggatacgacatagacactgacacgtcaacacggataataatttgaaaaaatgacataatacagtgtaattataggtgtcgt----gtcc 22794079  T
Q  423 gacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    ||||| |||||||||||||| |||||||||||||||| | |||||||| | |||||||||    
T  22794078 gacactgacgcatgtccgactccgggacacacctaattcgaggagtgtacgtgcttcata 22794019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 346 - 482
Target Start/End: Complemental strand, 17831604 - 17831463
Alignment:
Q  346 gacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcg-----gtgtcagacaccgacgcatgtccg 440  Q
    ||||| |||| |||||||| | || |||| ||||||||| |||| |||||||||||||||| |||| ||||     ||||| |||||||||   ||||||    
T  17831604 gacactgacacgccgacaccgctaataatttgagaaaatcacattattcagtgtaatcatatgtgtcgtcgtgtcagtgtcggacaccgacatgtgtccg 17831505  T
Q  441 acaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||||||||||| |||||||  ||||||||||||| ||||||    
T  17831504 acaccgggacacgcctaatcttaggagtgtccatgtttcata 17831463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 323 - 484
Target Start/End: Complemental strand, 10577831 - 10577674
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtca 422  Q
    |||||||||||||||| |||||||||||||||| |||||||| | || |  | | ||||||| ||| ||| ||||||||| ||| |   |||||| | |     
T  10577831 acacggacaccggacacgacacggacaccgacacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatg---tgtcgggggcg 10577735  T
Q  423 gacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcatact 484  Q
    |||| |||||| |||| ||||| ||||||| ||| ||||||||||||||| |||||||||||    
T  10577734 gaca-cgacgcgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatact 10577674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 32899939 - 32900009
Alignment:
Q  412 tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||||||||| |||||||||||||||| ||||||||||||| |||||||| |||| ||||| |||||||||    
T  32899939 tgtcggtgtcggacaccgacgcatgtcggacaccgggacacccctaatccgaggattgtccttgcttcata 32900009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 366 - 472
Target Start/End: Complemental strand, 351137 - 351029
Alignment:
Q  366 gatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaa 463  Q
    |||| |||| ||| ||||| |||||||||| || ||||||| || |  ||||| ||| |||||||||||||||| | |||||||||||| ||||||||||    
T  351137 gataataatttgataaaatcacataattcaatggaatcatatgtatcgtgtcgctgttagacaccgacgcatgttcaacaccgggacacgcctaatccaa 351038  T
Q  464 ggagtgtcc 472  Q
    |||||||||    
T  351037 ggagtgtcc 351029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 326 - 411
Target Start/End: Complemental strand, 398858 - 398773
Alignment:
Q  326 cggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 411  Q
    ||||||||||||| ||||||||||| |||| |||||||| | || |||| ||| ||||| ||||||||||||||||| ||||||||    
T  398858 cggacaccggacacgacacggacactgacacgccgacaccgctaataatttgaaaaaatcacataattcagtgtaattataggtgt 398773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 371 - 482
Target Start/End: Complemental strand, 40258981 - 40258874
Alignment:
Q  371 taatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgt 470  Q
    |||| ||| ||||| ||||||||||||||||| | | |   ||||||||||||||| |||| | ||||||||||| |||||| |||||||| ||||||||    
T  40258981 taatttgaaaaaatcacataattcagtgtaattacaag---tgtcggtgtcagaca-cgacacctgtccgacaccaggacacgcctaatccgaggagtgt 40258886  T
Q  471 ccatgcttcata 482  Q
    ||||||||||||    
T  40258885 ccatgcttcata 40258874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 323 - 481
Target Start/End: Complemental strand, 1486805 - 1486646
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt---tgtcggtg 419  Q
    ||||||| |||||| | |||||||| || |||| || ||||| | || |||| ||| ||||| ||||||||||||||||| ||| ||||   ||||| ||    
T  1486805 acacggataccggatacgacacggatactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcg-tg 1486707  T
Q  420 tcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcat 481  Q
    || ||||| ||| | |||||||||||||||||| |||||||| |||||||||  ||||||||    
T  1486706 tcggacac-gacacgtgtccgacaccgggacacgcctaatccgaggagtgtctgtgcttcat 1486646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 333 - 478
Target Start/End: Complemental strand, 5898352 - 5898211
Alignment:
Q  333 cggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacg 432  Q
    |||||||||||| ||||| || | |||||||| | || |||| ||| ||||| ||||||||||||||||| ||| |    |||||||||||||| ||||     
T  5898352 cggacatgacacagacactgagacgccgacaccgctaataatctgaaaaaatcacataattcagtgtaattatatg---cgtcggtgtcagaca-cgaca 5898257  T
Q  433 catgtccgacaccgggacacacctaatccaaggagtgtccatgctt 478  Q
    | ||||| ||||||||||||  ||||||| |||||||||| |||||    
T  5898256 cgtgtccaacaccgggacacgtctaatccgaggagtgtccgtgctt 5898211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 322 - 401
Target Start/End: Complemental strand, 15641127 - 15641048
Alignment:
Q  322 aacacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaa 401  Q
    |||||||||| |||||||||||||||||| ||||||||||||| | || |||| | ||||||| |||| |||||||||||    
T  15641127 aacacggacatcggacatgacacggacactgacatgccgacactgctaataatttaagaaaatcacatgattcagtgtaa 15641048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 435 - 482
Target Start/End: Complemental strand, 1704983 - 1704936
Alignment:
Q  435 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||||    
T  1704983 tgtccgacaccgagacacgcctaatccaaggagtgtccatgcttcata 1704936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 361 - 453
Target Start/End: Complemental strand, 24176425 - 24176325
Alignment:
Q  361 acacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--------tgtcggtgtcagacaccgacgcatgtccgacaccgggacac 452  Q
    |||| |||| |||| |||||||||||||| |||||||||||| ||||||||        |||||||||| |||||||||| |||||| ||||||||||||    
T  24176425 acaccgataataatttgagaaaataacatcattcagtgtaattataggtgtcgagatcatgtcggtgtcggacaccgacgaatgtccaacaccgggacac 24176326  T
Q  453 a 453  Q
    |    
T  24176325 a 24176325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 346 - 482
Target Start/End: Original strand, 36878447 - 36878584
Alignment:
Q  346 gacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtc-----cg 440  Q
    ||||| |||| |||||||| | || |||| ||||||||| ||||||||||||||||| |||||   |||||||||| |||| |||  ||||||     ||    
T  36878447 gacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatagg---tgtcggtgtctgaca-cgaaacatgtccgacacg 36878542  T
Q  441 acaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||| ||||||| |||||||| |||||||||| |||||||||    
T  36878543 acacggggacacgcctaatcccaggagtgtccgtgcttcata 36878584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 316 - 482
Target Start/End: Original strand, 40917707 - 40917878
Alignment:
Q  316 ctatgaaacacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatca------taggt 409  Q
    ||||||||||||||||||||||| |||||||| || |||| |||||||| | || |||| ||| |||||  || |||| |||||||| |      | |||    
T  40917707 ctatgaaacacggacaccggacacgacacggatactgacacgccgacacagctaataatttgaaaaaat--cacaattaagtgtaattacaagtctcggt 40917804  T
Q  410 gt--tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    ||  |||||||||  |||| |||| | |||||||||||||||||| |||||||| |||| ||||| |||||||||    
T  40917805 gtcgtgtcggtgttggaca-cgacacgtgtccgacaccgggacacgcctaatccgaggactgtccgtgcttcata 40917878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 323 - 481
Target Start/End: Complemental strand, 42359545 - 42359391
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtca 422  Q
    ||||| |||||| |||  |||||||||| |||| || |||||   || |||| ||| ||||| ||| ||||||||||||| | | ||||   |||||||     
T  42359545 acacgaacaccgtacacaacacggacactgacacgctgacacatctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgt---cggtgtcg 42359449  T
Q  423 gacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcat 481  Q
    ||||  ||||  |||||||||||||||||| |||||||| |||||||||| ||||||||    
T  42359448 gacaa-gacgtgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 42359391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 360 - 481
Target Start/End: Complemental strand, 11412827 - 11412709
Alignment:
Q  360 gacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaat 459  Q
    ||||| |||| |||||||||||||| |||||||||| ||| ||||||||   |||||||||  |||||| ||   ||||||||||  |||||  ||| ||    
T  11412827 gacaccgataataatatgagaaaatgacataattcaatgtgatcatagg---tgtcggtgttggacaccaacatgtgtccgacactaggacatgccttat 11412731  T
Q  460 ccaaggagtgtccatgcttcat 481  Q
    || |||||||||| ||||||||    
T  11412730 cctaggagtgtccgtgcttcat 11412709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 332 - 402
Target Start/End: Complemental strand, 5376587 - 5376517
Alignment:
Q  332 ccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 402  Q
    ||||||| |||||||||||  ||| |||||||| | || |||| | |||||||||||||||||||||||||    
T  5376587 ccggacacgacacggacactaacacgccgacaccgctaataatttaagaaaataacataattcagtgtaat 5376517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 9828104 - 9828173
Alignment:
Q  412 tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||| ||||||||||| ||| | ||||||||||||||||||  ||||||| |||||||||| |||||||||    
T  9828104 tgtccgtgtcagacac-gacacgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcata 9828173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 440 - 482
Target Start/End: Complemental strand, 27965983 - 27965941
Alignment:
Q  440 gacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    ||||||||||||| |||||||| ||||||||||||||||||||    
T  27965983 gacaccgggacacgcctaatccgaggagtgtccatgcttcata 27965941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 482
Target Start/End: Complemental strand, 38076043 - 38075910
Alignment:
Q  346 gacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacacc 445  Q
    ||||| |||| | |||||| | || |||| |||| |||| |||||| |||||||||||||| ||||   ||||||| |||| ||| |  || ||||||||    
T  38076043 gacacggacacgacgacactgctaataatttgagtaaatcacataagtcagtgtaatcatatgtgt---cggtgtcggacatcgatgtgtgaccgacacc 38075947  T
Q  446 gggacacacctaatccaaggagtgtccatgcttcata 482  Q
    ||||||| ||||||   |||||||| |||||||||||    
T  38075946 gggacacgcctaatttgaggagtgtacatgcttcata 38075910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 343 - 482
Target Start/End: Original strand, 1815240 - 1815375
Alignment:
Q  343 acggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgac 442  Q
    |||||||| |||| ||||||||  ||| | || | | ||||| ||||||||||||||||| | | |   |||||||||| |||| |||| ||||||||||    
T  1815240 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaattacaag---tgtcggtgtccgaca-cgacacatgtccgac 1815335  T
Q  443 accgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||||||||| |||||||  ||||||| || || ||||||    
T  1815336 accgggacacgcctaatctgaggagtgaccgtgattcata 1815375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 371 - 470
Target Start/End: Complemental strand, 18190156 - 18190061
Alignment:
Q  371 taatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgt 470  Q
    |||| ||| ||||| ||||||||||||||||| | | ||||   || ||||||||||  || | ||||||||||||||||||||||||||| ||||||||    
T  18190156 taatttgaaaaaattacataattcagtgtaattacaagtgt---cgatgtcagacaca-acacgtgtccgacaccgggacacacctaatccgaggagtgt 18190061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 471
Target Start/End: Complemental strand, 19562711 - 19562567
Alignment:
Q  328 gacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt---tgtcggtgtcaga 424  Q
    |||||||||||  ||||| |||| |||| |||||||| | || |||| |||||||||  |||| ||||||||||| ||| ||||   |||| ||||| ||    
T  19562711 gacaccggacac-acacgaacactgacacgccgacactgctaataatttgagaaaatctcatagttcagtgtaattatatgtgtaggtgtcagtgtcgga 19562613  T
Q  425 caccgacgcatgtccgacaccgggacacacctaatccaaggagtgtc 471  Q
     ||  || | |||||||||| |||||||||||||||| |||||||||    
T  19562612 taca-acacgtgtccgacacagggacacacctaatccgaggagtgtc 19562567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 334 - 402
Target Start/End: Complemental strand, 25452233 - 25452165
Alignment:
Q  334 ggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 402  Q
    ||||||||||  |||||||||||||| |||| | || |||| |||||||||  ||||||||||||||||    
T  25452233 ggacatgacaaagacaccgacatgccaacactgctaataatttgagaaaatctcataattcagtgtaat 25452165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 323 - 411
Target Start/End: Original strand, 38503283 - 38503371
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 411  Q
    |||||||||| |||||||||||||||||  |||  ||||||| | || |||| ||||||||| | ||| ||||||||||| ||| ||||    
T  38503283 acacggacacgggacatgacacggacactaacacaccgacaccgctaataatttgagaaaatcatatatttcagtgtaattatatgtgt 38503371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 482
Target Start/End: Complemental strand, 46348462 - 46348324
Alignment:
Q  340 gacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtcc 439  Q
    ||||||||||| |||| |||||||| | || |||| ||| ||||| | |||||| |||||||| | | |   |||||||||| |||| |||| | |||||    
T  46348462 gacacggacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattacaag---tgtcggtgtcggaca-cgacacgtgtcc 46348367  T
Q  440 gacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    ||||||| ||||| ||| |||| ||| |||||| |||||||||    
T  46348366 gacaccgagacacgcctgatccgaggtgtgtccgtgcttcata 46348324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 435 - 482
Target Start/End: Original strand, 113364 - 113411
Alignment:
Q  435 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    ||||| |||||||||||| |||||||| ||||||| ||||||||||||    
T  113364 tgtccaacaccgggacacgcctaatccgaggagtgcccatgcttcata 113411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 402
Target Start/End: Complemental strand, 6612267 - 6612188
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 402  Q
    ||||| |||||||||| ||||||||||  |||| ||||| || | || |||| ||| ||||| |||||||||||||||||    
T  6612267 acacgaacaccggacacgacacggacaatgacacgccgatacagttaataatttgaaaaaattacataattcagtgtaat 6612188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 435 - 482
Target Start/End: Original strand, 10233327 - 10233374
Alignment:
Q  435 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    ||||||||||| ||||||||||||||  |||||||||| |||||||||    
T  10233327 tgtccgacaccaggacacacctaatcagaggagtgtccgtgcttcata 10233374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 402
Target Start/End: Original strand, 15323126 - 15323205
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 402  Q
    |||||||||||||||| |||| |||||| |||||| ||| || | || |||| ||| ||||| |||||||| ||||||||    
T  15323126 acacggacaccggacacgacatggacactgacatgtcgatacagttaataatttgaaaaaatcacataatttagtgtaat 15323205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 482
Target Start/End: Original strand, 15765805 - 15765876
Alignment:
Q  411 ttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    ||||||||||||||  ||||||  |||| ||||| ||||||| |||||||| | |||||||| |||||||||    
T  15765805 ttgtcggtgtcagatgccgacgtgtgtctgacactgggacacgcctaatccgaagagtgtccgtgcttcata 15765876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 411
Target Start/End: Complemental strand, 30847799 - 30847728
Alignment:
Q  340 gacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 411  Q
    ||||||| ||||||||||| ||||| | || |||| ||| ||||| |||||||||| |||||||||| ||||    
T  30847799 gacacgggcaccgacatgctgacactgctaataatttgaaaaaatgacataattcaatgtaatcatatgtgt 30847728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 440 - 482
Target Start/End: Complemental strand, 7918197 - 7918155
Alignment:
Q  440 gacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||||| ||||||||||||||| |||||||||| |||||||||    
T  7918197 gacaccaggacacacctaatccgaggagtgtccgtgcttcata 7918155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 435 - 481
Target Start/End: Complemental strand, 16297269 - 16297223
Alignment:
Q  435 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttcat 481  Q
    ||||||||||| |||||| |||||||| |||||||||| ||||||||    
T  16297269 tgtccgacaccaggacacgcctaatccgaggagtgtccgtgcttcat 16297223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 412 - 482
Target Start/End: Complemental strand, 32461463 - 32461394
Alignment:
Q  412 tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||||||||| ||||| ||| | |||| ||||| ||||||| ||||||||||| ||||||| |||||||||    
T  32461463 tgtcggtgtcggacac-gacacgtgtctgacactgggacacgcctaatccaagaagtgtccgtgcttcata 32461394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 482
Target Start/End: Original strand, 5944363 - 5944412
Alignment:
Q  433 catgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    ||||||||||||||||| || |||||||| |||||||| | |||||||||    
T  5944363 catgtccgacaccgggatacgcctaatccgaggagtgttcgtgcttcata 5944412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 402
Target Start/End: Complemental strand, 10572683 - 10572606
Alignment:
Q  325 acggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 402  Q
    |||||||||||||| |||| | |||| |||| ||||||||   || |||| ||||||||| ||||||||| |||||||    
T  10572683 acggacaccggacacgacatgaacactgacacgccgacaccactaataatttgagaaaatcacataattcggtgtaat 10572606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 405
Target Start/End: Original strand, 16812519 - 16812588
Alignment:
Q  336 acatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcat 405  Q
    ||||||||||||||| ||||  |||||||  ||| |||| ||| ||||| ||||||||||||| ||||||    
T  16812519 acatgacacggacactgacacaccgacaccaataataatttgacaaaatcacataattcagtggaatcat 16812588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 411
Target Start/End: Complemental strand, 39101243 - 39101190
Alignment:
Q  358 ccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 411  Q
    |||||||  ||| |||| |||||||||||||||||| |||||||| ||||||||    
T  39101243 ccgacacatataataatttgagaaaataacataattaagtgtaattataggtgt 39101190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 374
Target Start/End: Complemental strand, 48040556 - 48040507
Alignment:
Q  325 acggacaccggacatgacacggacaccgacatgccgacacggatattaat 374  Q
    |||||||||||||| ||||||||||| |||| |||||||| |||| ||||    
T  48040556 acggacaccggacacgacacggacactgacacgccgacacagataataat 48040507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 402
Target Start/End: Complemental strand, 48450673 - 48450604
Alignment:
Q  333 cggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 402  Q
    |||||| ||||||||||| |||| ||| |||| | || |||| ||| |||||||||||||| ||||||||    
T  48450673 cggacacgacacggacactgacacgccaacacagctaataatttgaaaaaataacataatttagtgtaat 48450604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 358 - 414
Target Start/End: Original strand, 6573987 - 6574043
Alignment:
Q  358 ccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgt 414  Q
    |||||||||||  |||| ||||| ||| | |||||| ||||||||||||||||||||    
T  6573987 ccgacacggatgataatttgagacaatgatataatttagtgtaatcataggtgttgt 6574043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 438 - 482
Target Start/End: Original strand, 6574051 - 6574095
Alignment:
Q  438 ccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    ||||||| ||||||| |||||||||||||||| || |||||||||    
T  6574051 ccgacactgggacacgcctaatccaaggagtgaccgtgcttcata 6574095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 435 - 471
Target Start/End: Complemental strand, 6612148 - 6612112
Alignment:
Q  435 tgtccgacaccgggacacacctaatccaaggagtgtc 471  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  6612148 tgtccgacaccaggacacgcctaatccaaggagtgtc 6612112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 335 - 411
Target Start/End: Original strand, 9709795 - 9709871
Alignment:
Q  335 gacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 411  Q
    |||| ||||||||||| |||||||| |||| | || |||| ||||||||| |||||||||  |||||| ||| ||||    
T  9709795 gacacgacacggacactgacatgcctacaccgctaataatttgagaaaatcacataattcgttgtaattatatgtgt 9709871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 12443537 - 12443477
Alignment:
Q  342 cacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 402  Q
    |||||| || |||| |||||||| | || |||| ||||||||| |||||||||||||||||    
T  12443537 cacggatacggacacgccgacacagctaataatttgagaaaatcacataattcagtgtaat 12443477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 323 - 402
Target Start/End: Complemental strand, 13011312 - 13011232
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatg-agaaaataacataattcagtgtaat 402  Q
    |||||||||||| ||| |||||| |||| ||||||||||||| | || |||| || | ||||| |||||||| ||||||||    
T  13011312 acacggacaccgaacacgacacgaacactgacatgccgacacagctaataatttgaaaaaaatcacataattaagtgtaat 13011232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 358 - 402
Target Start/End: Complemental strand, 26238173 - 26238129
Alignment:
Q  358 ccgacacggatattaatatgagaaaataacataattcagtgtaat 402  Q
    ||||||| | || |||| |||||||||||||||||||||||||||    
T  26238173 ccgacaccgctaataatttgagaaaataacataattcagtgtaat 26238129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 323 - 482
Target Start/End: Complemental strand, 558 - 403
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtca 422  Q
    |||||||||||| ||| | ||||||||| || | |||||||| | || |||| ||| ||||| ||| ||||||||||||| | | |   ||||||||||     
T  558 acacggacaccgaacacgccacggacactgatacgccgacactgctaataatttgaaaaaatcacaaaattcagtgtaattacaag---tgtcggtgtcg 462  T
Q  423 gacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||| |||||| ||||||||||||||||||||||||||| |||||||||| |||||||||    
T  461 gaca-cgacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 323 - 481
Target Start/End: Complemental strand, 225364 - 225199
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcg---- 416  Q
    |||||||||||||||| ||||||||||| |||| |||||||| |||| |||| ||||||||| ||||||| || |||||| ||| ||||  ||| |        
T  225364 acacggacaccggacacgacacggacactgacacgccgacacagataataatttgagaaaatgacataatacaatgtaattataagtgtcgtgttggtgt 225265  T
Q  417 -gtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcat 481  Q
     ||||| ||||| ||||| ||| ||||||| |||||| |||||| | |||||||||| ||||||||    
T  225264 cgtgtcggacactgacgcgtgttcgacaccaggacacgcctaattcgaggagtgtccgtgcttcat 225199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 325 - 481
Target Start/End: Original strand, 13365 - 13523
Alignment:
Q  325 acggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt---tgtcggtgtc 421  Q
    |||||||||||| ||||||||||||| |||| ||||||||   || |||| ||||||||| ||||||||||||| ||| | | | ||   ||||||||||    
T  13365 acggacaccggagatgacacggacactgacacgccgacacaactaataatttgagaaaatcacataattcagtgcaattacaagggtcggtgtcggtgtc 13464  T
Q  422 agacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcat 481  Q
     |||| |||| |  ||| |||||  |||||||||||||||||||||||||| ||||||||    
T  13465 ggaca-cgacacgcgtctgacactaggacacacctaatccaaggagtgtccgtgcttcat 13523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 325 - 481
Target Start/End: Complemental strand, 21962 - 21804
Alignment:
Q  325 acggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt---tgtcggtgtc 421  Q
    |||||||||||| ||||||||||||| |||| ||||||||   || |||| ||||||||| ||||||||||||| ||| | | | ||   ||||||||||    
T  21962 acggacaccggagatgacacggacactgacacgccgacacaactaataatttgagaaaatcacataattcagtgcaattacaagggtcggtgtcggtgtc 21863  T
Q  422 agacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcat 481  Q
     |||| |||| |  ||| |||||  |||||||||||||||||||||||||| ||||||||    
T  21862 ggaca-cgacacgcgtctgacactaggacacacctaatccaaggagtgtccgtgcttcat 21804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 46; Significance: 6e-17; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 316 - 482
Target Start/End: Original strand, 241550 - 241723
Alignment:
Q  316 ctatgaaacacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt---- 411  Q
    ||||||| ||||||||||||||| ||||||||||| |||| |||||||| | || |||| ||  ||||| |||||||| |||||||| ||  ||||        
T  241550 ctatgaagcacggacaccggacacgacacggacactgacacgccgacacagctaataatttggaaaaatcacataatttagtgtaattatgagtgtcggt 241649  T
Q  412 ----tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
        ||| |||||| |||| |||| | |||||||||||||||||| |||||||| || ||||||| |||||||||    
T  241650 gtcgtgttggtgtcggaca-cgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcata 241723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 482
Target Start/End: Complemental strand, 236980 - 236915
Alignment:
Q  417 gtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||||| |||| || || |||| |||||||||||||||||||||  |||||||||  |||||||||    
T  236980 gtgtcatacacggatgcgtgtctgacaccgggacacacctaatctgaggagtgtctgtgcttcata 236915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 340 - 482
Target Start/End: Original strand, 51791 - 51941
Alignment:
Q  340 gacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacac-cgacg------ 432  Q
    ||||||||||| |||| |||||||| | || |||| ||| ||||| ||||||||||||||||| | | ||||||||||||||||||||   |||          
T  51791 gacacggacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgttgtcggtgtcagacacgatacgtgtccg 51890  T
Q  433 -catgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
     | ||||| |||||||||||| |||||||| |||| |||||||||||||||    
T  51891 tcgtgtccaacaccgggacacgcctaatccgaggaatgtccatgcttcata 51941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 340 - 409
Target Start/End: Complemental strand, 8132 - 8063
Alignment:
Q  340 gacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggt 409  Q
    |||||||||||||||| | ||| ||||||| |||| ||||||||| |||||||||||||||| |||||||    
T  8132 gacacggacaccgacacgtcgatacggataataatttgagaaaatgacataattcagtgtaaacataggt 8063  T

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Target: scaffold0199 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 359 - 481
Target Start/End: Original strand, 1948 - 2066
Alignment:
Q  359 cgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaa 458  Q
    ||||||||||| |||| || |||||| ||||| || |||||||||||||||||     ||||| ||||||||| |||||| |||||| | ||||||||||    
T  1948 cgacacggataataatttgtgaaaatgacatattttagtgtaatcataggtgt----cgtgtcggacaccgacacatgtctgacacctgcacacacctaa 2043  T
Q  459 tccaaggagtgtccatgcttcat 481  Q
    ||| | | |||||| ||||||||    
T  2044 tccgaagggtgtccgtgcttcat 2066  T

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Target: scaffold0053 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 323 - 482
Target Start/End: Original strand, 8761 - 8916
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtca 422  Q
    |||||||||||||||| ||||||||||| |||| |||||||| | || |||| ||| ||||| | || ||| |||||||| | | |   ||||||||||     
T  8761 acacggacaccggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcatattatttagtgtaattacaag---tgtcggtgtcg 8857  T
Q  423 gacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||| |||| | |||||||||||| ||||| |||||||  |||||| ||| |||||||||    
T  8858 gaca-cgacacgtgtccgacaccgagacacgcctaatctgaggagtctccgtgcttcata 8916  T

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Target: scaffold0223 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 325 - 402
Target Start/End: Original strand, 20137 - 20214
Alignment:
Q  325 acggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 402  Q
    |||||||||||||| ||||||||||  |||| |||||||| | || |||| ||| ||||| |||||||||||||||||    
T  20137 acggacaccggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaat 20214  T

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Target: scaffold0168 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 322 - 391
Target Start/End: Original strand, 21005 - 21074
Alignment:
Q  322 aacacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataa 391  Q
    |||||||||||| |||| ||||||||||| ||||||| ||||||| || |||| ||||||||| ||||||    
T  21005 aacacggacaccagacacgacacggacactgacatgctgacacggttaataatttgagaaaatcacataa 21074  T

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Target: scaffold0050 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 341 - 480
Target Start/End: Original strand, 70259 - 70394
Alignment:
Q  341 acacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccg 440  Q
    |||| ||||| |||||| |||||| | || |||| ||| ||||||||||||||||||||||| ||| |   |||||||||| |||| |||| | ||||||    
T  70259 acacagacacagacatgtcgacacagttaataatttgaaaaaataacataattcagtgtaattataag---tgtcggtgtcggaca-cgacacgtgtccg 70354  T
Q  441 acaccgggacacacctaatccaaggagtgtccatgcttca 480  Q
    ||||| |||||  |||||||| | |||||| | |||||||    
T  70355 acaccaggacatgcctaatccgatgagtgttcgtgcttca 70394  T

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Target: scaffold0027 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 323 - 402
Target Start/End: Original strand, 46645 - 46724
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 402  Q
    ||||||||| |||||| ||||||||||  |||| |||||||| | || |||| ||| ||||| |||||||||||||||||    
T  46645 acacggacatcggacacgacacggacaatgacacgccgacacagttaataatttgaaaaaatcacataattcagtgtaat 46724  T

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Target: scaffold0021 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 323 - 402
Target Start/End: Original strand, 130445 - 130524
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 402  Q
    |||||||||||||||| ||||||||||  |||| |||||||| | || || | ||| ||||| |||||||||||||||||    
T  130445 acacggacaccggacacgacacggacaatgacaagccgacacagttaatagtttgaaaaaatcacataattcagtgtaat 130524  T

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Target: scaffold0793 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 428 - 482
Target Start/End: Complemental strand, 4876 - 4822
Alignment:
Q  428 cgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||| |||||||||||| ||||||| |||||||| |||||||||| |||||||||    
T  4876 cgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 4822  T

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Target: scaffold0136 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 482
Target Start/End: Complemental strand, 3933 - 3779
Alignment:
Q  335 gacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--------tgtcggtgtcagaca 426  Q
    |||| ||||| ||||| || |||||||||||| || |||| | | ||||| ||||||||||||||||| | | ||||        ||| |||||| ||||    
T  3933 gacacgacacagacactgatatgccgacacggttaataatttaaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgttggtgtcggaca 3834  T
Q  427 ccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    | ||| ||||||||||| || ||||| |||||||| |||||||||| |||||||||    
T  3833 c-gacacatgtccgacatcgagacacgcctaatccgaggagtgtccttgcttcata 3779  T

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Target: scaffold0008 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 323 - 481
Target Start/End: Complemental strand, 263468 - 263303
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--------tgt 414  Q
    |||||||||| ||| | ||||||||||| |||||| | |||| | || |||| ||||||||  ||||||||||||||||| ||| ||||        |||    
T  263468 acacggacactggatacgacacggacactgacatgtcaacactgctaataatttgagaaaaccacataattcagtgtaattataagtgtcagtgtcgtgt 263369  T
Q  415 cggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcat 481  Q
    |||||||||||| |||| | ||| ||| |||  ||||| |||||||| |||||||||| || |||||    
T  263368 cggtgtcagaca-cgacacgtgttcgataccaagacacgcctaatccgaggagtgtccgtggttcat 263303  T

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Target: scaffold0380 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 435 - 482
Target Start/End: Original strand, 8672 - 8719
Alignment:
Q  435 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||||||||| |||| || ||||||||||||||||||| |||||||||    
T  8672 tgtccgacactgggatacgcctaatccaaggagtgtccgtgcttcata 8719  T

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Target: scaffold0128 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 435 - 482
Target Start/End: Original strand, 32775 - 32822
Alignment:
Q  435 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 482  Q
    |||||||||||||||||||| |||||| |||||||||  |||||||||    
T  32775 tgtccgacaccgggacacacataatccgaggagtgtcggtgcttcata 32822  T

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Target: scaffold0022 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 413
Target Start/End: Original strand, 99879 - 99946
Alignment:
Q  346 gacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttg 413  Q
    ||||| |||||| |||||| |||| |||| | |||||||||||||||||| |||||| ||| ||||||    
T  99879 gacacggacatgtcgacaccgataataattttagaaaataacataattcaatgtaattatatgtgttg 99946  T

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Target: scaffold0004 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 402
Target Start/End: Original strand, 92790 - 92849
Alignment:
Q  343 acggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 402  Q
    |||||||| |||| |||||||| | || |||| ||||||||| |||||||||||||||||    
T  92790 acggacactgacacgccgacaccgctaataatttgagaaaattacataattcagtgtaat 92849  T

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Target: scaffold0116 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 364
Target Start/End: Original strand, 9861 - 9902
Alignment:
Q  323 acacggacaccggacatgacacggacaccgacatgccgacac 364  Q
    |||||||||||||||| |||| ||||||||||| ||||||||    
T  9861 acacggacaccggacacgacatggacaccgacacgccgacac 9902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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