View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19372_high_8 (Length: 506)

Name: NF19372_high_8
Description: NF19372
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19372_high_8
NF19372_high_8
[»] chr6 (31 HSPs)
chr6 (241-410)||(24711037-24711206)
chr6 (241-410)||(30832562-30832730)
chr6 (325-410)||(13727437-13727522)
chr6 (325-410)||(21479477-21479562)
chr6 (325-410)||(19737730-19737815)
chr6 (325-410)||(21280528-21280613)
chr6 (325-410)||(33774100-33774185)
chr6 (329-407)||(27788729-27788807)
chr6 (242-304)||(21280336-21280398)
chr6 (329-407)||(28075770-28075848)
chr6 (329-407)||(17353941-17354019)
chr6 (335-407)||(20711761-20711833)
chr6 (241-305)||(23070889-23070953)
chr6 (241-300)||(13727654-13727713)
chr6 (241-300)||(21479286-21479345)
chr6 (241-296)||(27314773-27314828)
chr6 (245-298)||(19741230-19741283)
chr6 (241-305)||(12083640-12083704)
chr6 (350-410)||(1155887-1155947)
chr6 (232-296)||(27579084-27579148)
chr6 (329-388)||(235286-235344)
chr6 (241-300)||(33773902-33773960)
chr6 (329-410)||(34397844-34397925)
chr6 (249-305)||(1156017-1156073)
chr6 (348-392)||(27994775-27994819)
chr6 (346-400)||(21183723-21183777)
chr6 (368-410)||(27314217-27314259)
chr6 (346-410)||(6159442-6159506)
chr6 (248-288)||(17353768-17353808)
chr6 (346-410)||(20611794-20611858)
chr6 (248-288)||(27788939-27788979)
[»] chr3 (40 HSPs)
chr3 (241-410)||(53149352-53149521)
chr3 (241-410)||(21582670-21582839)
chr3 (241-410)||(42098700-42098869)
chr3 (241-410)||(47467584-47467752)
chr3 (325-410)||(54619241-54619326)
chr3 (241-322)||(50258717-50258798)
chr3 (325-410)||(3953934-3954019)
chr3 (325-410)||(29620426-29620511)
chr3 (325-410)||(38681131-38681216)
chr3 (329-407)||(34290677-34290755)
chr3 (329-407)||(43207279-43207356)
chr3 (329-407)||(44708464-44708542)
chr3 (325-410)||(27078607-27078692)
chr3 (325-410)||(27084404-27084489)
chr3 (325-410)||(36716063-36716148)
chr3 (325-410)||(18372462-18372551)
chr3 (241-300)||(36716280-36716339)
chr3 (241-300)||(38681352-38681411)
chr3 (329-400)||(53506932-53507003)
chr3 (324-410)||(8073376-8073461)
chr3 (248-305)||(1148354-1148411)
chr3 (241-298)||(3954859-3954916)
chr3 (241-300)||(27078823-27078882)
chr3 (241-300)||(27084620-27084679)
chr3 (247-300)||(54619458-54619511)
chr3 (241-305)||(13795189-13795253)
chr3 (329-407)||(37168354-37168432)
chr3 (329-407)||(50939274-50939352)
chr3 (329-407)||(54407199-54407276)
chr3 (241-286)||(29620618-29620663)
chr3 (350-410)||(36605973-36606032)
chr3 (329-399)||(9878736-9878806)
chr3 (329-391)||(48157126-48157188)
chr3 (255-300)||(36605862-36605907)
chr3 (341-410)||(50258661-50258731)
chr3 (241-300)||(18372035-18372093)
chr3 (249-305)||(8074087-8074143)
chr3 (248-288)||(9878936-9878976)
chr3 (248-288)||(48156951-48156991)
chr3 (248-288)||(53507134-53507174)
[»] chr1 (38 HSPs)
chr1 (241-410)||(14146207-14146376)
chr1 (241-410)||(3406325-3406494)
chr1 (241-410)||(3440326-3440495)
chr1 (241-410)||(41697174-41697343)
chr1 (247-410)||(6771704-6771867)
chr1 (241-410)||(16139962-16140131)
chr1 (243-360)||(6888473-6888590)
chr1 (325-410)||(5316671-5316756)
chr1 (325-410)||(44655732-44655817)
chr1 (329-410)||(23185422-23185503)
chr1 (332-407)||(27559635-27559710)
chr1 (329-407)||(1366918-1366996)
chr1 (329-407)||(9173063-9173141)
chr1 (329-407)||(9181045-9181123)
chr1 (328-410)||(50881424-50881506)
chr1 (329-410)||(4971655-4971736)
chr1 (329-410)||(5027544-5027625)
chr1 (325-381)||(27906783-27906839)
chr1 (329-400)||(19955712-19955783)
chr1 (241-300)||(44655541-44655600)
chr1 (329-407)||(17168951-17169029)
chr1 (329-407)||(40501830-40501908)
chr1 (241-300)||(27906953-27907012)
chr1 (329-389)||(44895647-44895707)
chr1 (329-375)||(13913554-13913600)
chr1 (248-305)||(10912094-10912151)
chr1 (241-285)||(50880570-50880614)
chr1 (329-400)||(51607487-51607558)
chr1 (251-297)||(5027982-5028028)
chr1 (248-305)||(23181720-23181777)
chr1 (325-400)||(34247039-34247106)
chr1 (245-288)||(13913733-13913776)
chr1 (355-410)||(21740974-21741029)
chr1 (245-288)||(40502041-40502084)
chr1 (348-409)||(5533326-5533387)
chr1 (248-288)||(1367128-1367168)
chr1 (346-410)||(43235807-43235871)
chr1 (248-288)||(44895476-44895516)
[»] chr7 (26 HSPs)
chr7 (241-407)||(10955380-10955546)
chr7 (241-410)||(12596324-12596493)
chr7 (325-410)||(8171576-8171661)
chr7 (325-410)||(29077200-29077285)
chr7 (329-407)||(20091321-20091399)
chr7 (329-407)||(23551111-23551189)
chr7 (329-407)||(48983884-48983962)
chr7 (329-410)||(18776803-18776884)
chr7 (329-407)||(24525725-24525803)
chr7 (329-391)||(25010417-25010479)
chr7 (329-407)||(38414916-38414994)
chr7 (329-407)||(47985010-47985088)
chr7 (241-305)||(28749583-28749647)
chr7 (241-300)||(18777023-18777082)
chr7 (329-375)||(10329482-10329528)
chr7 (350-410)||(28749715-28749774)
chr7 (329-407)||(19692078-19692156)
chr7 (325-400)||(40357413-40357480)
chr7 (349-410)||(9021837-9021898)
chr7 (243-305)||(29076934-29076998)
chr7 (346-410)||(2611299-2611363)
chr7 (349-400)||(23859077-23859128)
chr7 (346-416)||(36891579-36891649)
chr7 (248-288)||(19691906-19691946)
chr7 (248-288)||(24525935-24525975)
chr7 (248-288)||(47985219-47985259)
[»] chr5 (33 HSPs)
chr5 (241-410)||(15480124-15480293)
chr5 (241-410)||(19523095-19523264)
chr5 (242-410)||(36187914-36188082)
chr5 (241-410)||(2274800-2274955)
chr5 (328-410)||(30854312-30854394)
chr5 (325-410)||(16592109-16592194)
chr5 (325-410)||(34756401-34756486)
chr5 (329-407)||(16198832-16198910)
chr5 (329-407)||(38869401-38869479)
chr5 (343-410)||(23284097-23284164)
chr5 (329-407)||(9364275-9364353)
chr5 (328-410)||(27078994-27079076)
chr5 (329-407)||(28822380-28822458)
chr5 (329-407)||(16799365-16799443)
chr5 (241-298)||(31881597-31881654)
chr5 (329-407)||(40389574-40389652)
chr5 (243-300)||(34756619-34756676)
chr5 (329-407)||(7670908-7670986)
chr5 (329-407)||(27924066-27924144)
chr5 (345-410)||(22986593-22986658)
chr5 (241-298)||(30853268-30853325)
chr5 (241-305)||(16592845-16592909)
chr5 (241-300)||(22987472-22987532)
chr5 (348-410)||(36868911-36868973)
chr5 (349-410)||(26718984-26719045)
chr5 (349-410)||(26988728-26988789)
chr5 (346-410)||(14318420-14318484)
chr5 (350-410)||(31194647-31194706)
chr5 (456-488)||(35676897-35676929)
chr5 (346-410)||(2530932-2530996)
chr5 (248-288)||(16199043-16199083)
chr5 (241-305)||(31194767-31194831)
chr5 (350-410)||(31881469-31881528)
[»] chr4 (49 HSPs)
chr4 (241-410)||(37514560-37514729)
chr4 (253-410)||(1105445-1105602)
chr4 (241-410)||(5128879-5129047)
chr4 (241-410)||(32915299-32915455)
chr4 (325-410)||(10978885-10978970)
chr4 (325-410)||(38209628-38209713)
chr4 (325-410)||(47128972-47129057)
chr4 (325-407)||(34768614-34768696)
chr4 (325-410)||(13460192-13460277)
chr4 (329-407)||(34027568-34027646)
chr4 (325-410)||(48209225-48209310)
chr4 (334-410)||(54780771-54780847)
chr4 (325-399)||(23509846-23509920)
chr4 (329-407)||(32128573-32128651)
chr4 (329-407)||(40089505-40089583)
chr4 (333-407)||(43455571-43455645)
chr4 (329-407)||(54083282-54083360)
chr4 (241-305)||(10431442-10431506)
chr4 (325-381)||(55255254-55255310)
chr4 (241-300)||(55255082-55255141)
chr4 (329-407)||(16845010-16845088)
chr4 (329-391)||(24969426-24969488)
chr4 (329-407)||(37777263-37777341)
chr4 (329-410)||(35779362-35779443)
chr4 (241-305)||(47127983-47128047)
chr4 (337-400)||(2790788-2790851)
chr4 (242-305)||(17679220-17679283)
chr4 (325-375)||(10428277-10428327)
chr4 (329-391)||(38352311-38352373)
chr4 (329-393)||(19498493-19498557)
chr4 (241-305)||(45560704-45560768)
chr4 (238-305)||(13459783-13459850)
chr4 (242-305)||(48208453-48208516)
chr4 (248-305)||(27596639-27596696)
chr4 (258-305)||(9579469-9579516)
chr4 (258-305)||(9585164-9585211)
chr4 (329-400)||(35465096-35465167)
chr4 (255-305)||(34769533-34769583)
chr4 (248-298)||(54779450-54779500)
chr4 (233-286)||(10978138-10978191)
chr4 (255-300)||(38209846-38209891)
chr4 (242-283)||(23510922-23510963)
chr4 (252-305)||(35780556-35780609)
chr4 (346-410)||(4167928-4167992)
chr4 (346-410)||(36118495-36118559)
chr4 (329-375)||(16882467-16882513)
chr4 (248-305)||(19498322-19498379)
chr4 (325-353)||(9578733-9578761)
chr4 (248-288)||(24969251-24969291)
[»] chr2 (31 HSPs)
chr2 (241-410)||(7162679-7162848)
chr2 (241-410)||(3952901-3953070)
chr2 (325-410)||(3155196-3155281)
chr2 (325-410)||(4505873-4505958)
chr2 (325-410)||(6964986-6965071)
chr2 (325-410)||(12337486-12337571)
chr2 (329-410)||(29939900-29939981)
chr2 (325-410)||(8907117-8907202)
chr2 (329-407)||(9046012-9046090)
chr2 (240-300)||(6964793-6964853)
chr2 (241-300)||(3155005-3155064)
chr2 (329-407)||(24410419-24410498)
chr2 (329-407)||(26716111-26716189)
chr2 (330-399)||(10762614-10762683)
chr2 (241-305)||(12337689-12337753)
chr2 (241-305)||(40635964-40636028)
chr2 (241-300)||(4505681-4505740)
chr2 (241-300)||(34693149-34693208)
chr2 (241-300)||(34715561-34715620)
chr2 (329-407)||(27506781-27506859)
chr2 (241-300)||(3399511-3399570)
chr2 (243-299)||(8907335-8907391)
chr2 (346-410)||(38400798-38400862)
chr2 (239-286)||(5952949-5952995)
chr2 (346-410)||(11952644-11952708)
chr2 (346-410)||(37182670-37182734)
chr2 (241-305)||(41213928-41213992)
chr2 (245-288)||(27506992-27507035)
chr2 (346-410)||(16097008-16097072)
chr2 (248-288)||(26715940-26715980)
chr2 (346-410)||(28425748-28425812)
[»] chr8 (28 HSPs)
chr8 (241-410)||(37430196-37430365)
chr8 (241-342)||(20003839-20003940)
chr8 (325-410)||(2952259-2952344)
chr8 (325-410)||(30883309-30883394)
chr8 (325-400)||(13534734-13534809)
chr8 (325-400)||(13624274-13624349)
chr8 (325-410)||(3048555-3048640)
chr8 (329-410)||(45475801-45475882)
chr8 (325-410)||(5860782-5860867)
chr8 (329-407)||(10917375-10917453)
chr8 (329-407)||(23606670-23606748)
chr8 (329-407)||(23798302-23798380)
chr8 (329-407)||(42600766-42600844)
chr8 (241-300)||(2952477-2952536)
chr8 (241-300)||(5861000-5861059)
chr8 (325-410)||(41879161-41879246)
chr8 (241-300)||(30883112-30883171)
chr8 (241-300)||(3048778-3048837)
chr8 (249-305)||(45472201-45472257)
chr8 (346-410)||(5942697-5942761)
chr8 (346-410)||(11290185-11290249)
chr8 (241-297)||(41878167-41878223)
chr8 (346-410)||(5973145-5973209)
chr8 (346-410)||(7944560-7944624)
chr8 (346-410)||(39332443-39332507)
chr8 (245-288)||(42600590-42600633)
chr8 (346-410)||(8102913-8102977)
chr8 (420-448)||(45475973-45476001)
[»] scaffold0001 (2 HSPs)
scaffold0001 (277-393)||(181851-181967)
scaffold0001 (241-284)||(181437-181480)
[»] scaffold0070 (2 HSPs)
scaffold0070 (325-410)||(1323-1408)
scaffold0070 (241-298)||(1013-1070)
[»] scaffold0039 (1 HSPs)
scaffold0039 (329-407)||(106522-106600)
[»] scaffold0012 (1 HSPs)
scaffold0012 (346-410)||(206527-206591)
[»] scaffold1590 (1 HSPs)
scaffold1590 (346-410)||(296-360)
[»] scaffold0227 (1 HSPs)
scaffold0227 (346-410)||(16028-16092)
[»] scaffold0097 (1 HSPs)
scaffold0097 (346-410)||(38926-38990)


Alignment Details
Target: chr6 (Bit Score: 138; Significance: 6e-72; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 241 - 410
Target Start/End: Complemental strand, 24711206 - 24711037
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggcttcaagagtgggggttcctcataattgattttggtgttag 340  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  24711206 ggggcgtccctgagggggtgcaaacagctcaaacaagctgggcctcccccaaggatgggcctcaagagtgggggttcctcatgattgattttggtgttag 24711107  T
Q  341 gtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||| |||||||||    
T  24711106 gtgggggttcctcatgtatacggtagtcattttcacctctgagtgtaccacatatatacggcaccttgta 24711037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 241 - 410
Target Start/End: Complemental strand, 30832730 - 30832562
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggcttcaagagtgggggttcctcataattgattttggtgttag 340  Q
    ||||||||| ||||||| |||||| |||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  30832730 ggggcgtccttgagggg-tgcaaacagctcaaatgagctgggcctccctcaaggatgggcctcaagagtgggggttcctcatgattgattttggtgttag 30832632  T
Q  341 gtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||| ||| |||||| || ||||||    
T  30832631 gtgggggttcctcatgcatacggtagtcattttcatctctgggtgtaccacatatatacggcatcttgta 30832562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 325 - 410
Target Start/End: Complemental strand, 13727522 - 13727437
Alignment:
Q  325 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||| |||||||||    
T  13727522 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgta 13727437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 325 - 410
Target Start/End: Original strand, 21479477 - 21479562
Alignment:
Q  325 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||| |||||||||    
T  21479477 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgta 21479562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 325 - 410
Target Start/End: Complemental strand, 19737815 - 19737730
Alignment:
Q  325 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||| |||||| |||||||||    
T  19737815 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctaggtgtaccgcatatatacggcaccttgta 19737730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 325 - 410
Target Start/End: Original strand, 21280528 - 21280613
Alignment:
Q  325 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||| ||||||||||| |||||| |||||||||    
T  21280528 ttgattttggtgttaggtgggagttcctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacggcaccttgta 21280613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 325 - 410
Target Start/End: Original strand, 33774100 - 33774185
Alignment:
Q  325 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  | || ||||||||||| |||||| |||||||||    
T  33774100 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacatttgggtgtaccgcatatatacggcaccttgta 33774185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 329 - 407
Target Start/End: Complemental strand, 27788807 - 27788729
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacacctt 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||| |||||| ||||||    
T  27788807 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcacctt 27788729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 242 - 304
Target Start/End: Original strand, 21280336 - 21280398
Alignment:
Q  242 gggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggcttca 304  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  21280336 gggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcttca 21280398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 329 - 407
Target Start/End: Original strand, 28075770 - 28075848
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacacctt 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || || ||||| ||||| |||||| ||||||    
T  28075770 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtatcgcatatatacggcacctt 28075848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 329 - 407
Target Start/End: Original strand, 17353941 - 17354019
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacacctt 407  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||  | || ||||||||||| |||||||||||||    
T  17353941 ttttggtgttaggtgggggttcatcatgtatacgatagtcattttcacatttgggtgtaccgcatatatacgacacctt 17354019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 335 - 407
Target Start/End: Complemental strand, 20711833 - 20711761
Alignment:
Q  335 tgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacacctt 407  Q
    |||||| |||||||||||||||||||||||||||||||||| || || ||||||||||| |||||| ||||||    
T  20711833 tgttagatgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcacctt 20711761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 241 - 305
Target Start/End: Complemental strand, 23070953 - 23070889
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggcttcaa 305  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||    
T  23070953 ggggcgtccttgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 23070889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 241 - 300
Target Start/End: Complemental strand, 13727713 - 13727654
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggc 300  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||    
T  13727713 ggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaagatgggc 13727654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 241 - 300
Target Start/End: Original strand, 21479286 - 21479345
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggc 300  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||||    
T  21479286 ggggcgtccctgagggggtgcaaacagctaaaacgagctgggcctccctcaaggatgggc 21479345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 241 - 296
Target Start/End: Complemental strand, 27314828 - 27314773
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggat 296  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  27314828 ggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggat 27314773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 245 - 298
Target Start/End: Complemental strand, 19741283 - 19741230
Alignment:
Q  245 cgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgg 298  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  19741283 cgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgg 19741230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 241 - 305
Target Start/End: Complemental strand, 12083704 - 12083640
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggcttcaa 305  Q
    ||||||||| |||||||||||||| |||||||||||||||||||| || ||||||||||| ||||    
T  12083704 ggggcgtccttgagggggtgcaaacagctcaaacgagctgggccttcctcaaggatgggcctcaa 12083640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 350 - 410
Target Start/End: Complemental strand, 1155947 - 1155887
Alignment:
Q  350 cctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    |||||||||||||||||||||||||| |||||  |||||||||| |||| |||||||||||    
T  1155947 cctcatgtatacggtagtcattttcacctctggatgtaccgcatatatatgacaccttgta 1155887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 232 - 296
Target Start/End: Complemental strand, 27579148 - 27579084
Alignment:
Q  232 atatgatctggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggat 296  Q
    |||||| | ||||||||||| |||||||||||  ||||||||||||||||||||||| |||||||    
T  27579148 atatgagcaggggcgtccctaagggggtgcaaccagctcaaacgagctgggcctccctcaaggat 27579084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 329 - 388
Target Start/End: Complemental strand, 235344 - 235286
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtac 388  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||| || ||||||    
T  235344 ttttggtgtt-ggtgggggtttctcatgtatacggtagtcattttcatctttgggtgtac 235286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 241 - 300
Target Start/End: Original strand, 33773902 - 33773960
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggc 300  Q
    |||||||||||||||||||||||| | |||||| |||||||||||||| |||||||||||    
T  33773902 ggggcgtccctgagggggtgcaaaca-ctcaaatgagctgggcctccctcaaggatgggc 33773960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 329 - 410
Target Start/End: Original strand, 34397844 - 34397925
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    ||||||||||| |||| |||||||||||| |||| |||||||||| | || |  ||||||||||| |||||| |||||||||    
T  34397844 ttttggtgttaagtggaggttcctcatgtttacgatagtcatttttacctttaggtgtaccgcatatatacgtcaccttgta 34397925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 249 - 305
Target Start/End: Complemental strand, 1156073 - 1156017
Alignment:
Q  249 cctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggcttcaa 305  Q
    |||||||||||||||| |||||||||||||| || |||||  |||||||||| ||||    
T  1156073 cctgagggggtgcaaacagctcaaacgagctaggtctcccttaaggatgggcctcaa 1156017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 348 - 392
Target Start/End: Original strand, 27994775 - 27994819
Alignment:
Q  348 ttcctcatgtatacggtagtcattttcatctctgagtgtaccgca 392  Q
    |||||||||||||||||||| ||||||| || |||||||||||||    
T  27994775 ttcctcatgtatacggtagtgattttcacctttgagtgtaccgca 27994819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 346 - 400
Target Start/End: Complemental strand, 21183777 - 21183723
Alignment:
Q  346 ggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacg 400  Q
    |||||||||||||||||||||| ||||||| || || ||||||| ||| ||||||    
T  21183777 ggttcctcatgtatacggtagtgattttcaactttgggtgtaccacatatatacg 21183723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 368 - 410
Target Start/End: Complemental strand, 27314259 - 27314217
Alignment:
Q  368 cattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    |||||||| ||||||||||||||||| |||||| |||||||||    
T  27314259 cattttcacctctgagtgtaccgcatatatacggcaccttgta 27314217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 346 - 410
Target Start/End: Original strand, 6159442 - 6159506
Alignment:
Q  346 ggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    ||||||| || ||||||||||| |||| || || ||| |||||||||| |||||||||| |||||    
T  6159442 ggttccttatatatacggtagtgatttccacctttgaatgtaccgcatatatacgacacattgta 6159506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 248 - 288
Target Start/End: Original strand, 17353768 - 17353808
Alignment:
Q  248 ccctgagggggtgcaaatagctcaaacgagctgggcctccc 288  Q
    ||||||||||||||||| |||||||  ||||||||||||||    
T  17353768 ccctgagggggtgcaaacagctcaacagagctgggcctccc 17353808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 346 - 410
Target Start/End: Original strand, 20611794 - 20611858
Alignment:
Q  346 ggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    |||||||||||||||||||||| ||||||| || ||  |||  || || ||||||||||||||||    
T  20611794 ggttcctcatgtatacggtagtgattttcacctttggatgtgtcgtatatatacgacaccttgta 20611858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 248 - 288
Target Start/End: Complemental strand, 27788979 - 27788939
Alignment:
Q  248 ccctgagggggtgcaaatagctcaaacgagctgggcctccc 288  Q
    ||||||||||||||||| |||||||  ||||||||||||||    
T  27788979 ccctgagggggtgcaaacagctcaacagagctgggcctccc 27788939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 138; Significance: 6e-72; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 241 - 410
Target Start/End: Complemental strand, 53149521 - 53149352
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggcttcaagagtgggggttcctcataattgattttggtgttag 340  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  53149521 ggggcgtccctcagggggtgcaaacagctcaaacgagctgggcctccaccaaggatgggcctcaagagtgggggttcctcatgattgattttggtgttag 53149422  T
Q  341 gtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||    
T  53149421 gtgggggttcctcatgtatacggtagtcatttttatctctgagtgtaccgcatatatacggcaccttgta 53149352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 241 - 410
Target Start/End: Original strand, 21582670 - 21582839
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggcttcaagagtgggggttcctcataattgattttggtgttag 340  Q
    |||||||| ||||||||||||||| |||||||||||||||||| ||||  |||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  21582670 ggggcgtctctgagggggtgcaaacagctcaaacgagctgggcatcccttaaggatgggcctcaagagtgggggttcctcatgattgattttggtgttag 21582769  T
Q  341 gtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||| |||||||||    
T  21582770 gtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgta 21582839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 241 - 410
Target Start/End: Original strand, 42098700 - 42098869
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggcttcaagagtgggggttcctcataattgattttggtgttag 340  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||     
T  42098700 ggggcgtccctgagggggtgcaaacagctcaaacgagttgggcctcccacaaggatgggcctcaagagtgggggttcctcatgattgattttggtgttaa 42098799  T
Q  341 gtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    || |||||||||||||||||||||||||||||||| |||||||| |||||||| |||||| |||||||||    
T  42098800 gtaggggttcctcatgtatacggtagtcattttcacctctgagtataccgcatatatacggcaccttgta 42098869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 241 - 410
Target Start/End: Original strand, 47467584 - 47467752
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggcttcaagagtgggggttcctcataattgattttggtgttag 340  Q
    ||||||||||||||||| |||||| ||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  47467584 ggggcgtccctgagggg-tgcaaacagctcaaacgagctgagcctccctcaaggatgggcctcaagagtgggggttcctcatgattgattttggtgttag 47467682  T
Q  341 gtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||| ||||| |||||| |||||||||    
T  47467683 gtgggggttcctcatgtatacggtagtcattttcacctctgggtgtatcgcatatatacggcaccttgta 47467752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 325 - 410
Target Start/End: Complemental strand, 54619326 - 54619241
Alignment:
Q  325 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||| |||||||||    
T  54619326 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgta 54619241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 241 - 322
Target Start/End: Complemental strand, 50258798 - 50258717
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggcttcaagagtgggggttcctcat 322  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||    
T  50258798 ggggcgtccctgagggggtgcaaacagctcaaatgagctgggcctccctcaaggatgggcctcaagagtgggggttcctcat 50258717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 325 - 410
Target Start/End: Complemental strand, 3954019 - 3953934
Alignment:
Q  325 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||| ||||||||||| |||||| |||||||||    
T  3954019 ttgattttggtgttaggtgggggttcctcatgtatacggttttcattttcacctctgggtgtaccgcatatatacggcaccttgta 3953934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 325 - 410
Target Start/End: Complemental strand, 29620511 - 29620426
Alignment:
Q  325 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||  | |||||||| |||||| |||||||||    
T  29620511 ttgattgtggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctggatataccgcatatatacggcaccttgta 29620426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 325 - 410
Target Start/End: Complemental strand, 38681216 - 38681131
Alignment:
Q  325 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||  ||||||||||  ||||| |||||||||    
T  38681216 ttgattttggtgttaggtggggtttcctcatgtatacggtagtcattttcacctctggatgtaccgcatacatacggcaccttgta 38681131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 329 - 407
Target Start/End: Complemental strand, 34290755 - 34290677
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacacctt 407  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| || || ||||||||||| |||||| ||||||    
T  34290755 ttttggtgttaggtgggggttcctcatatatacggtagtcattttcacctttgggtgtaccgcatatatacggcacctt 34290677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 329 - 407
Target Start/End: Complemental strand, 43207356 - 43207279
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacacctt 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||| |||||| ||||||    
T  43207356 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttga-tgtaccgcatatatacggcacctt 43207279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 329 - 407
Target Start/End: Original strand, 44708464 - 44708542
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacacctt 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||| || |||||| ||||||    
T  44708464 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccggatatatacggcacctt 44708542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 325 - 410
Target Start/End: Complemental strand, 27078692 - 27078607
Alignment:
Q  325 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||| || |||||||| |||||| ||| |||||    
T  27078692 ttgattttggtgttaggtaggggtttctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcactttgta 27078607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 325 - 410
Target Start/End: Complemental strand, 27084489 - 27084404
Alignment:
Q  325 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||| || |||||||| |||||| ||| |||||    
T  27084489 ttgattttggtgttaggtaggggtttctcatgtatacggtagtcattttcacctctgggtataccgcatatatacggcactttgta 27084404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 325 - 410
Target Start/End: Complemental strand, 36716148 - 36716063
Alignment:
Q  325 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    |||||||||||||||||||||||| ||||| ||||||||| ||| |||||| ||||| ||||||||||| |||||| |||||||||    
T  36716148 ttgattttggtgttaggtgggggtccctcacgtatacggtggtcgttttcacctctgggtgtaccgcatatatacggcaccttgta 36716063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 325 - 410
Target Start/End: Original strand, 18372462 - 18372551
Alignment:
Q  325 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtac----cgcatgtatacgacaccttgta 410  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||| ||||||    ||||| ||||||||||||||||    
T  18372462 ttgattttggtgttagatggggattcctcatgtatacggtagtcattttcacctctgtgtgtaccgcgcgcatatatacgacaccttgta 18372551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 241 - 300
Target Start/End: Complemental strand, 36716339 - 36716280
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggc 300  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  36716339 ggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggc 36716280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 241 - 300
Target Start/End: Complemental strand, 38681411 - 38681352
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggc 300  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  38681411 ggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggc 38681352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 329 - 400
Target Start/End: Complemental strand, 53507003 - 53506932
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacg 400  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| || || ||||||||||| ||||||    
T  53507003 ttttggtgttaggtgggggtttctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacg 53506932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 324 - 410
Target Start/End: Complemental strand, 8073461 - 8073376
Alignment:
Q  324 attgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    |||| ||||||||||| |||||| ||||||||||||||||||||||||||||  | || ||||||||||| ||||||||||||||||    
T  8073461 attgcttttggtgttatgtgggg-ttcctcatgtatacggtagtcattttcacttttgggtgtaccgcatatatacgacaccttgta 8073376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 248 - 305
Target Start/End: Complemental strand, 1148411 - 1148354
Alignment:
Q  248 ccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggcttcaa 305  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  1148411 ccctgagggggtgcgaacagctcaaacgagctgggcctcccccaaggatgggcttcaa 1148354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 241 - 298
Target Start/End: Complemental strand, 3954916 - 3954859
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgg 298  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  3954916 ggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgg 3954859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 241 - 300
Target Start/End: Complemental strand, 27078882 - 27078823
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggc 300  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  27078882 ggggcgttcctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggc 27078823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 241 - 300
Target Start/End: Complemental strand, 27084679 - 27084620
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggc 300  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  27084679 ggggcgttcctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggc 27084620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 247 - 300
Target Start/End: Complemental strand, 54619511 - 54619458
Alignment:
Q  247 tccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggc 300  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  54619511 tccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggc 54619458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 241 - 305
Target Start/End: Original strand, 13795189 - 13795253
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggcttcaa 305  Q
    ||||||||| |||||| ||||||| ||||||||||||||||||||||| ||||||||||| ||||    
T  13795189 ggggcgtccttgagggcgtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 13795253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 329 - 407
Target Start/End: Original strand, 37168354 - 37168432
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacacctt 407  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||| || || || |||| ||| |||||| ||||||    
T  37168354 ttttagtgttaggtgggagttcctcatgtatacggtagtcattttcacctttgggtataccacatatatacggcacctt 37168432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 329 - 407
Target Start/End: Complemental strand, 50939352 - 50939274
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacacctt 407  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| | || || |||||||  || |||||| ||||||    
T  50939352 ttttggtgttaggcgggggttcctcatgtatacggtagtcatttttacctttgggtgtaccatatatatacggcacctt 50939274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 329 - 407
Target Start/End: Complemental strand, 54407276 - 54407199
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacacctt 407  Q
    ||||||||||||||||||||| || |||||||||||||||||||||| || ||  |||||||||| |||||| ||||||    
T  54407276 ttttggtgttaggtgggggttact-atgtatacggtagtcattttcacctttggatgtaccgcatatatacggcacctt 54407199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 241 - 286
Target Start/End: Complemental strand, 29620663 - 29620618
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctc 286  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  29620663 ggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctc 29620618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 350 - 410
Target Start/End: Original strand, 36605973 - 36606032
Alignment:
Q  350 cctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    |||||||||||||||||| ||||||||||||| ||||||||||| |||||| |||||||||    
T  36605973 cctcatgtatacggtagt-attttcatctctgggtgtaccgcatatatacggcaccttgta 36606032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 329 - 399
Target Start/End: Complemental strand, 9878806 - 9878736
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatac 399  Q
    |||||| ||||| ||||||||||| ||||||||| |||||||||||| || || ||||||||||| |||||    
T  9878806 ttttggcgttagatgggggttccttatgtatacgatagtcattttcacctttgggtgtaccgcatatatac 9878736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 329 - 391
Target Start/End: Original strand, 48157126 - 48157188
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgc 391  Q
    ||||| ||||| ||||||||||||||||||||| ||||||||||||| || || |||||||||    
T  48157126 ttttgatgttaagtgggggttcctcatgtatacagtagtcattttcacctttgggtgtaccgc 48157188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 36605862 - 36605907
Alignment:
Q  255 ggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggc 300  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||    
T  36605862 ggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggc 36605907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 410
Target Start/End: Complemental strand, 50258731 - 50258661
Alignment:
Q  341 gtgggggttcctcatgtatacggtagtcattttcatc-tctgagtgtaccgcatgtatacgacaccttgta 410  Q
    |||||||||||||||| ||||  |||||||||||| | || | ||||||||||| ||||||||||||||||    
T  50258731 gtgggggttcctcatgcatacaatagtcattttcaccctccgggtgtaccgcatatatacgacaccttgta 50258661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 300
Target Start/End: Original strand, 18372035 - 18372093
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggc 300  Q
    |||||||| |||||||| |||||| || |||||||||||||| ||||| |||||||||||    
T  18372035 ggggcgtctctgagggg-tgcaaacagttcaaacgagctggggctccctcaaggatgggc 18372093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 305
Target Start/End: Complemental strand, 8074143 - 8074087
Alignment:
Q  249 cctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggcttcaa 305  Q
    ||||||||  |||||| | ||||| |||||||||||||| |||||||||||| ||||    
T  8074143 cctgagggattgcaaacaactcaatcgagctgggcctcctccaaggatgggcctcaa 8074087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 248 - 288
Target Start/End: Complemental strand, 9878976 - 9878936
Alignment:
Q  248 ccctgagggggtgcaaatagctcaaacgagctgggcctccc 288  Q
    ||||||||||||||||| |||||||  ||||||||||||||    
T  9878976 ccctgagggggtgcaaacagctcaacagagctgggcctccc 9878936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 248 - 288
Target Start/End: Original strand, 48156951 - 48156991
Alignment:
Q  248 ccctgagggggtgcaaatagctcaaacgagctgggcctccc 288  Q
    ||||||||||||||||| |||||||  ||||||||||||||    
T  48156951 ccctgagggggtgcaaacagctcaacagagctgggcctccc 48156991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 248 - 288
Target Start/End: Complemental strand, 53507174 - 53507134
Alignment:
Q  248 ccctgagggggtgcaaatagctcaaacgagctgggcctccc 288  Q
    ||||||||||||||||| |||||||  ||||||||||||||    
T  53507174 ccctgagggggtgcaaacagctcaacagagctgggcctccc 53507134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 138; Significance: 6e-72; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 241 - 410
Target Start/End: Original strand, 14146207 - 14146376
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggcttcaagagtgggggttcctcataattgattttggtgttag 340  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||| |||||||||||||    
T  14146207 ggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagtgggggttcctcatgattaattttggtgttag 14146306  T
Q  341 gtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||    
T  14146307 gtgggggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcaccttgta 14146376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 241 - 410
Target Start/End: Original strand, 3406325 - 3406494
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggcttcaagagtgggggttcctcataattgattttggtgttag 340  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  3406325 ggggcgtccttgagggggtgcaaacagctcaaacgagctgggcctcccccaaggatgggcctcaagagtgggggttcctcatgattgattttggtgttag 3406424  T
Q  341 gtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||| |||| |||||| |||||||||    
T  3406425 gtgggggttcctcatgtatacggtagtcattttcacctccgagtgtactgcatatatacggcaccttgta 3406494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 241 - 410
Target Start/End: Complemental strand, 3440495 - 3440326
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggcttcaagagtgggggttcctcataattgattttggtgttag 340  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  3440495 ggggcgtccttgagggggtgcaaacagctcaaacgagctgggcctcccccaaggatgggcctcaagagtgggggttcctcatgattgattttggtgttag 3440396  T
Q  341 gtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||| |||| |||||| |||||||||    
T  3440395 gtgggggttcctcatgtatacggtagtcattttcacctccgagtgtactgcatatatacggcaccttgta 3440326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 241 - 410
Target Start/End: Complemental strand, 41697343 - 41697174
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggcttcaagagtgggggttcctcataattgattttggtgttag 340  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  41697343 ggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcatcaagagtgggggttcctcatgattgattttggtgttag 41697244  T
Q  341 gtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    |||||||||||||||||||||||||||||||||||  ||||  ||||| |||| ||||||| || |||||    
T  41697243 gtgggggttcctcatgtatacggtagtcattttcacttctggatgtactgcatatatacgatactttgta 41697174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 247 - 410
Target Start/End: Original strand, 6771704 - 6771867
Alignment:
Q  247 tccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggcttcaagagtgggggttcctcataattgattttggtgttaggtgggg 346  Q
    |||||||||||||||||| |||||||||||||||||||||||  |||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |    
T  6771704 tccctgagggggtgcaaacagctcaaacgagctgggcctcccttaaggatgggcctcaagagtgggggttcctcatgattgattttggtgttaggtggag 6771803  T
Q  347 gttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    ||||||| ||||||||||||||||||||| ||||| ||||||||||| |||||| |||||||||    
T  6771804 gttcctcgtgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgta 6771867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 241 - 410
Target Start/End: Original strand, 16139962 - 16140131
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggcttcaagagtgggggttcctcataattgattttggtgttag 340  Q
    ||||||||| |||||||||||||| |||||||||||| |||||||||| ||||||||||  ||||| ||||||||||||||| ||||||||| |||||||    
T  16139962 ggggcgtccttgagggggtgcaaacagctcaaacgagttgggcctccctcaaggatgggtctcaagcgtgggggttcctcatgattgattttagtgttag 16140061  T
Q  341 gtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    |||||| |||||||||||||||||||||||||||| ||||  ||||||||||| ||||| ||||||||||    
T  16140062 gtggggattcctcatgtatacggtagtcattttcacctctaggtgtaccgcatatatacaacaccttgta 16140131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 243 - 360
Target Start/End: Original strand, 6888473 - 6888590
Alignment:
Q  243 ggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggcttcaagagtgggggttcctcataattgattttggtgttaggt 342  Q
    |||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||| |     
T  6888473 ggcgtccctgagggggtgcaaacagctcaaacgagttgggcctccctcaaggatgggcctcaagagtgggggttcctcatgattgattttggtgttaagc 6888572  T
Q  343 gggggttcctcatgtata 360  Q
    ||||||||||| ||||||    
T  6888573 gggggttcctcgtgtata 6888590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 325 - 410
Target Start/End: Original strand, 5316671 - 5316756
Alignment:
Q  325 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||| |||||||||    
T  5316671 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgta 5316756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 325 - 410
Target Start/End: Original strand, 44655732 - 44655817
Alignment:
Q  325 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||| ||||||||||||||||    
T  44655732 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacgacaccttgta 44655817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 329 - 410
Target Start/End: Original strand, 23185422 - 23185503
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||| |||||| |||||||||    
T  23185422 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctatgggtgtaccgcatatatacggcaccttgta 23185503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 332 - 407
Target Start/End: Original strand, 27559635 - 27559710
Alignment:
Q  332 tggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacacctt 407  Q
    |||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||| |||||||||||||    
T  27559635 tggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacacctt 27559710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 329 - 407
Target Start/End: Complemental strand, 1366996 - 1366918
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacacctt 407  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||| |||||| ||||||    
T  1366996 ttttggtgttaggtgggggttcctcgtgtatacggtagtcattttcatctttgggtgtaccgcatatatacggcacctt 1366918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 329 - 407
Target Start/End: Complemental strand, 9173141 - 9173063
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacacctt 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || ||  |||||||||| |||||| ||||||    
T  9173141 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttggatgtaccgcatatatacggcacctt 9173063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 329 - 407
Target Start/End: Complemental strand, 9181123 - 9181045
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacacctt 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || ||  |||||||||| |||||| ||||||    
T  9181123 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttggatgtaccgcatatatacggcacctt 9181045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 328 - 410
Target Start/End: Original strand, 50881424 - 50881506
Alignment:
Q  328 attttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||| ||||   |||||||||| ||||||||||||||||    
T  50881424 attttggtgttaggtggaggttcctcatgtatactgtagtcattttcacctctagatgtaccgcatatatacgacaccttgta 50881506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 329 - 410
Target Start/End: Complemental strand, 4971736 - 4971655
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  | || ||||||||||| ||||||  ||||||||    
T  4971736 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacttatgggtgtaccgcatatatacggtaccttgta 4971655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 329 - 410
Target Start/End: Original strand, 5027544 - 5027625
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||| || || ||||||||||| |||||| |||||||||    
T  5027544 ttttggtgttaggtgggggttcctcatctatatggtagtcattttcacctatgggtgtaccgcatatatacggcaccttgta 5027625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 325 - 381
Target Start/End: Complemental strand, 27906839 - 27906783
Alignment:
Q  325 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctg 381  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  27906839 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctg 27906783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 329 - 400
Target Start/End: Original strand, 19955712 - 19955783
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacg 400  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| || || ||||||||||| ||||||    
T  19955712 ttttggtgttaggtgggggttcctcatatatacggtagtcattttcacctttgggtgtaccgcatatatacg 19955783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 241 - 300
Target Start/End: Original strand, 44655541 - 44655600
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggc 300  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  44655541 ggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggc 44655600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 329 - 407
Target Start/End: Original strand, 17168951 - 17169029
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacacctt 407  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||| || || ||||||||||| ||||| |||||||    
T  17168951 ttttggtgttaggtaggggttcctcatgtatatggtagtcattttcacctttgggtgtaccgcatatatacaacacctt 17169029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 329 - 407
Target Start/End: Complemental strand, 40501908 - 40501830
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacacctt 407  Q
    |||||||||||||||| ||||| |||||||||||||||||||||| | || || ||||||||||| |||||||||||||    
T  40501908 ttttggtgttaggtggaggttcttcatgtatacggtagtcatttttacctttgggtgtaccgcatatatacgacacctt 40501830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 241 - 300
Target Start/End: Complemental strand, 27907012 - 27906953
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggc 300  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  27907012 ggggcgtccttgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggc 27906953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 329 - 389
Target Start/End: Original strand, 44895647 - 44895707
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtacc 389  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| || || |||||||    
T  44895647 ttttggtgttaggtgggggttcctcatgtatacggtaatcattttcacctttgggtgtacc 44895707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 329 - 375
Target Start/End: Complemental strand, 13913600 - 13913554
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttca 375  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||    
T  13913600 ttttggtgttaggtgggggtttctcatgtatacggtagtcattttca 13913554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 305
Target Start/End: Complemental strand, 10912151 - 10912094
Alignment:
Q  248 ccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggcttcaa 305  Q
    |||||||||||||| || |||||||||||||||||||||| |||||||||||| ||||    
T  10912151 ccctgagggggtgcgaacagctcaaacgagctgggcctcctccaaggatgggcctcaa 10912094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 241 - 285
Target Start/End: Original strand, 50880570 - 50880614
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcct 285  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  50880570 ggggcgtccctgagggggtgcaaacagctcaaacgagctgggcct 50880614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 329 - 400
Target Start/End: Complemental strand, 51607558 - 51607487
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacg 400  Q
    ||||||| |||| |||| |||||||||||||||||||||||||||||  | || ||||||||||| ||||||    
T  51607558 ttttggtattagatgggagttcctcatgtatacggtagtcattttcacgtttgggtgtaccgcatatatacg 51607487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 251 - 297
Target Start/End: Complemental strand, 5028028 - 5027982
Alignment:
Q  251 tgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatg 297  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||    
T  5028028 tgagggggtgcaaacagctcaaccgagctgggcctcccccaaggatg 5027982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 305
Target Start/End: Original strand, 23181720 - 23181777
Alignment:
Q  248 ccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggcttcaa 305  Q
    ||||||||||||||||| ||||||| ||||||||||| ||||||| ||||||| ||||    
T  23181720 ccctgagggggtgcaaacagctcaaccgagctgggccacccccaatgatgggcctcaa 23181777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 325 - 400
Target Start/End: Original strand, 34247039 - 34247106
Alignment:
Q  325 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacg 400  Q
    |||||||||||||||||||||||||||        |||||||||||||||||||||  ||||||||||| ||||||    
T  34247039 ttgattttggtgttaggtgggggttcc--------acggtagtcattttcatctcttggtgtaccgcatatatacg 34247106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 245 - 288
Target Start/End: Complemental strand, 13913776 - 13913733
Alignment:
Q  245 cgtccctgagggggtgcaaatagctcaaacgagctgggcctccc 288  Q
    |||||||||||||||||||| |||||||  ||||||||||||||    
T  13913776 cgtccctgagggggtgcaaacagctcaacagagctgggcctccc 13913733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 410
Target Start/End: Complemental strand, 21741029 - 21740974
Alignment:
Q  355 tgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    |||||| |||||||||||||| ||||| ||||| ||||| |||||| |||||||||    
T  21741029 tgtatatggtagtcattttcacctctgggtgtatcgcatatatacggcaccttgta 21740974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 245 - 288
Target Start/End: Complemental strand, 40502084 - 40502041
Alignment:
Q  245 cgtccctgagggggtgcaaatagctcaaacgagctgggcctccc 288  Q
    |||||||||||||||||||| |||||||  ||||||||||||||    
T  40502084 cgtccctgagggggtgcaaacagctcaacagagctgggcctccc 40502041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 409
Target Start/End: Original strand, 5533326 - 5533387
Alignment:
Q  348 ttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgt 409  Q
    |||||||||||||||||||| ||||||| || ||| |||||  ||| |||||| ||||||||    
T  5533326 ttcctcatgtatacggtagtgattttcacctttgattgtacatcatatatacggcaccttgt 5533387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 248 - 288
Target Start/End: Complemental strand, 1367168 - 1367128
Alignment:
Q  248 ccctgagggggtgcaaatagctcaaacgagctgggcctccc 288  Q
    ||||||||||||||||| |||||||  ||||||||||||||    
T  1367168 ccctgagggggtgcaaacagctcaacagagctgggcctccc 1367128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 346 - 410
Target Start/End: Complemental strand, 43235871 - 43235807
Alignment:
Q  346 ggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    ||||||||||||||||| |||| ||||||| || || ||||||  ||| ||||||||| ||||||    
T  43235871 ggttcctcatgtatacgatagtgattttcacctttgggtgtacatcatatatacgacatcttgta 43235807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 248 - 288
Target Start/End: Original strand, 44895476 - 44895516
Alignment:
Q  248 ccctgagggggtgcaaatagctcaaacgagctgggcctccc 288  Q
    ||||||||||||||||| |||||||  ||||||||||||||    
T  44895476 ccctgagggggtgcaaacagctcaacagagctgggcctccc 44895516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 135; Significance: 4e-70; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 241 - 407
Target Start/End: Original strand, 10955380 - 10955546
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggcttcaagagtgggggttcctcataattgattttggtgttag 340  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  10955380 ggggcgtccttgagggggtgcaaatagctcaaacgagttgggcctccctcaaggatgggcctcaagagtgggggttcctcatgattgattttggtgttag 10955479  T
Q  341 gtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacacctt 407  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||    
T  10955480 gtgggggttcctcatgtatacggtagtcattttcacctctgagtgtaccgcatatatacggcacctt 10955546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 241 - 410
Target Start/End: Complemental strand, 12596493 - 12596324
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggcttcaagagtgggggttcctcataattgattttggtgttag 340  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||| |||||||||||||||||    
T  12596493 ggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatggccctcaagagtgggggttcctcatgattgattttggtgttag 12596394  T
Q  341 gtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    |||||||||||||||| |||||||||||||||||| ||||| ||||||| ||| |||||| |||||||||    
T  12596393 gtgggggttcctcatgcatacggtagtcattttcacctctgggtgtaccacatatatacggcaccttgta 12596324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 325 - 410
Target Start/End: Complemental strand, 8171661 - 8171576
Alignment:
Q  325 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||    
T  8171661 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcaccttgta 8171576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 325 - 410
Target Start/End: Original strand, 29077200 - 29077285
Alignment:
Q  325 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||| ||||||||||||||||    
T  29077200 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctcttggtgtaccgcatatatacgacaccttgta 29077285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 329 - 407
Target Start/End: Complemental strand, 20091399 - 20091321
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacacctt 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||| |||||| ||||||    
T  20091399 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcacctt 20091321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 329 - 407
Target Start/End: Complemental strand, 23551189 - 23551111
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacacctt 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || ||  |||||||||| |||||||||||||    
T  23551189 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttggatgtaccgcatatatacgacacctt 23551111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 329 - 407
Target Start/End: Complemental strand, 48983962 - 48983884
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacacctt 407  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| || || ||||||||||| |||||||||||||    
T  48983962 ttttggtgttaggtgggggttcctcatgtatacggtagttattttcacctttgggtgtaccgcatatatacgacacctt 48983884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 329 - 410
Target Start/End: Complemental strand, 18776884 - 18776803
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||  |||| ||||||||||| |||||| |||||||||    
T  18776884 ttttggtgttaggtgggggtttctcatgtatacggtagtcattttcacatctgggtgtaccgcatatatacggcaccttgta 18776803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 329 - 407
Target Start/End: Complemental strand, 24525803 - 24525725
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacacctt 407  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  | || ||||||||||| || ||| ||||||    
T  24525803 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacttttgggtgtaccgcatatacacggcacctt 24525725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 329 - 391
Target Start/End: Original strand, 25010417 - 25010479
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgc 391  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||    
T  25010417 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgc 25010479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 329 - 407
Target Start/End: Complemental strand, 38414994 - 38414916
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacacctt 407  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| || || ||||||| ||| |||||| ||||||    
T  38414994 ttttggtgttaggtgggggttcctcatgtatacagtagtcattttcacctttgggtgtaccacatatatacgtcacctt 38414916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 329 - 407
Target Start/End: Complemental strand, 47985088 - 47985010
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacacctt 407  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||| || || ||||||||||| |||||| ||||||    
T  47985088 tttttgtgttaggtgggggttcctcatgtatacggtggtcattttcacctttgggtgtaccgcatatatacggcacctt 47985010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 241 - 305
Target Start/End: Original strand, 28749583 - 28749647
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggcttcaa 305  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||    
T  28749583 ggggcgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 28749647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 241 - 300
Target Start/End: Complemental strand, 18777082 - 18777023
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggc 300  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||    
T  18777082 ggggcgtccctgaggaggtgcaaacagctcaaacgagctgggcctccctcaaggatgggc 18777023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 329 - 375
Target Start/End: Complemental strand, 10329528 - 10329482
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttca 375  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||    
T  10329528 ttttggtgttaagtgggggtttctcatgtatacggtagtcattttca 10329482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 350 - 410
Target Start/End: Original strand, 28749715 - 28749774
Alignment:
Q  350 cctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    |||||||||||||||||| |||||||  |||||||||||||||| |||||| |||||||||    
T  28749715 cctcatgtatacggtagt-attttcacatctgagtgtaccgcatatatacggcaccttgta 28749774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 329 - 407
Target Start/End: Original strand, 19692078 - 19692156
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacacctt 407  Q
    ||||||||||||| | ||||||||||||||||||  ||||||||||| || |  ||||||||||| |||| | ||||||    
T  19692078 ttttggtgttaggcgagggttcctcatgtatacgaaagtcattttcacctttaggtgtaccgcatatatatggcacctt 19692156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 325 - 400
Target Start/End: Complemental strand, 40357480 - 40357413
Alignment:
Q  325 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacg 400  Q
    |||||||||||||||||||||||||||        |||||||||||||||||||||  ||||||||||| ||||||    
T  40357480 ttgattttggtgttaggtgggggttcc--------acggtagtcattttcatctcttggtgtaccgcatatatacg 40357413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 9021898 - 9021837
Alignment:
Q  349 tcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    ||||||||||||||||||| ||||||| || || ||||||||||| |||||| ||| |||||    
T  9021898 tcctcatgtatacggtagtgattttcacctttgggtgtaccgcatatatacggcacattgta 9021837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 243 - 305
Target Start/End: Original strand, 29076934 - 29076998
Alignment:
Q  243 ggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccc--caaggatgggcttcaa 305  Q
    ||||| |||||||||||||||| |||| |||||||| ||||||||||  ||||||||||| ||||    
T  29076934 ggcgttcctgagggggtgcaaacagcttaaacgagcagggcctccccctcaaggatgggcctcaa 29076998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 410
Target Start/End: Complemental strand, 2611363 - 2611299
Alignment:
Q  346 ggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    |||||||||||||||| || || ||||||| |  || ||||||||||| ||||||||||||||||    
T  2611363 ggttcctcatgtatacagttgtgattttcaccattgtgtgtaccgcatatatacgacaccttgta 2611299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 400
Target Start/End: Original strand, 23859077 - 23859128
Alignment:
Q  349 tcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacg 400  Q
    ||||||||||||||||||| |||||||||| || ||||| ||||| ||||||    
T  23859077 tcctcatgtatacggtagtaattttcatctttgggtgtatcgcatatatacg 23859128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 346 - 416
Target Start/End: Original strand, 36891579 - 36891649
Alignment:
Q  346 ggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgtactcatc 416  Q
    |||||||||||||||||||||| ||||||| || ||  ||||||| || ||||| |||| ||||| |||||    
T  36891579 ggttcctcatgtatacggtagtgattttcacctttggatgtaccgaatatatacaacacattgtattcatc 36891649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 248 - 288
Target Start/End: Original strand, 19691906 - 19691946
Alignment:
Q  248 ccctgagggggtgcaaatagctcaaacgagctgggcctccc 288  Q
    ||||||||||||||||| |||||||  ||||||||||||||    
T  19691906 ccctgagggggtgcaaacagctcaacagagctgggcctccc 19691946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 248 - 288
Target Start/End: Complemental strand, 24525975 - 24525935
Alignment:
Q  248 ccctgagggggtgcaaatagctcaaacgagctgggcctccc 288  Q
    ||||||||||||||||| |||||||  ||||||||||||||    
T  24525975 ccctgagggggtgcaaacagctcaacagagctgggcctccc 24525935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 248 - 288
Target Start/End: Complemental strand, 47985259 - 47985219
Alignment:
Q  248 ccctgagggggtgcaaatagctcaaacgagctgggcctccc 288  Q
    ||||||||||||||||| |||||||  ||||||||||||||    
T  47985259 ccctgagggggtgcaaacagctcaacagagctgggcctccc 47985219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 134; Significance: 2e-69; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 241 - 410
Target Start/End: Complemental strand, 15480293 - 15480124
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggcttcaagagtgggggttcctcataattgattttggtgttag 340  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  15480293 ggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagtgggggttcctcatgattgattttggtgttag 15480194  T
Q  341 gtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    |||||||||||||||| |||||||||||||||||| ||||| ||||||||||| ||||||||| ||||||    
T  15480193 gtgggggttcctcatgcatacggtagtcattttcacctctgggtgtaccgcatatatacgacatcttgta 15480124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 241 - 410
Target Start/End: Original strand, 19523095 - 19523264
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggcttcaagagtgggggttcctcataattgattttggtgttag 340  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  19523095 ggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagtgggggttcctcatgattgattttggtgttag 19523194  T
Q  341 gtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    |||||||||||||||||||| |||||||||||||| ||||| ||||||||||| |||||| |||||||||    
T  19523195 gtgggggttcctcatgtatatggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgta 19523264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 242 - 410
Target Start/End: Complemental strand, 36188082 - 36187914
Alignment:
Q  242 gggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggcttcaagagtgggggttcctcataattgattttggtgttagg 341  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||| ||| ||||||||||||||    
T  36188082 gggcgtccctgagggggtgcaaacagctcaaacgagttgggcctccctcaaggatgggcctcaagagtgggggttcctcatgattaattttggtgttagg 36187983  T
Q  342 tgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    ||| |||| ||||||||||||||||||||||||| ||||| ||||||||||| |||||| |||||||||    
T  36187982 tggaggtttctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgta 36187914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 241 - 410
Target Start/End: Original strand, 2274800 - 2274955
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggcttcaagagtgggggttcctcataattgattttggtgttag 340  Q
    ||||||| |||||||||||||||| |||||||| ||| |||||||||| ||||||||| | ||||||              | |||||||||||||||||    
T  2274800 ggggcgttcctgagggggtgcaaacagctcaaatgagttgggcctccctcaaggatggacctcaaga--------------tgattgattttggtgttag 2274885  T
Q  341 gtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    ||||||||||||| ||||||||||||||||||||| ||||| |||||| |||| ||||||| ||||||||    
T  2274886 gtgggggttcctcgtgtatacggtagtcattttcacctctgggtgtactgcatatatacgataccttgta 2274955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 328 - 410
Target Start/End: Original strand, 30854312 - 30854394
Alignment:
Q  328 attttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||| |||||||||    
T  30854312 attttggtgttaggtgggggttcctcatgtatacgatagtcattttcacctctgagtgtaccgcatatatacggcaccttgta 30854394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 325 - 410
Target Start/End: Complemental strand, 16592194 - 16592109
Alignment:
Q  325 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||| ||||||||||| ||||    
T  16592194 ttgattttggtgttaggtgggggttcctcatatatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccctgta 16592109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 325 - 410
Target Start/End: Complemental strand, 34756486 - 34756401
Alignment:
Q  325 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||| |||||||||    
T  34756486 ttgattttgttgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgta 34756401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 329 - 407
Target Start/End: Complemental strand, 16198910 - 16198832
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacacctt 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || || ||||| ||||| |||||||||||||    
T  16198910 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtatcgcatatatacgacacctt 16198832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 329 - 407
Target Start/End: Complemental strand, 38869479 - 38869401
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacacctt 407  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| || || ||||||||||| |||||||||||||    
T  38869479 ttttggtgttaggtgggggtttctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacacctt 38869401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 343 - 410
Target Start/End: Complemental strand, 23284164 - 23284097
Alignment:
Q  343 gggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||    
T  23284164 gggggttcctcatgtatacggtagtcattttcatctttgggtgtaccgcatatatacgacaccttgta 23284097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 329 - 407
Target Start/End: Original strand, 9364275 - 9364353
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacacctt 407  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| || || ||||||||||| |||||| ||||||    
T  9364275 ttttgatgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcacctt 9364353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 328 - 410
Target Start/End: Original strand, 27078994 - 27079076
Alignment:
Q  328 attttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| || |  ||||||||||| |||||| |||||||||    
T  27078994 attttggtgttaggtgggggttcctcatgtatacagtagtcattttcacctttaggtgtaccgcatatatacggcaccttgta 27079076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 329 - 407
Target Start/End: Complemental strand, 28822458 - 28822380
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacacctt 407  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| || || ||||||||||| |||||| ||||||    
T  28822458 ttttggtgttaggtgggggttcatcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcacctt 28822380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 329 - 407
Target Start/End: Complemental strand, 16799443 - 16799365
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacacctt 407  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||| || || ||||||||||| |||||| ||||||    
T  16799443 ttttggtgttatgtgggggttcctcatgtatacggtaatcattttcacctttgggtgtaccgcatatatacggcacctt 16799365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 241 - 298
Target Start/End: Complemental strand, 31881654 - 31881597
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgg 298  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  31881654 ggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgg 31881597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 329 - 407
Target Start/End: Complemental strand, 40389652 - 40389574
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacacctt 407  Q
    |||| ||||||||||||||||||||||  |||||||||||||||||| || ||  |||||||||| |||||||||||||    
T  40389652 ttttagtgttaggtgggggttcctcataaatacggtagtcattttcacctttggatgtaccgcatatatacgacacctt 40389574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 243 - 300
Target Start/End: Complemental strand, 34756676 - 34756619
Alignment:
Q  243 ggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggc 300  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  34756676 ggcgttcctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggc 34756619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 329 - 407
Target Start/End: Original strand, 7670908 - 7670986
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacacctt 407  Q
    |||||||||||||||||| | |||||||||||||||||||||||||| || || |||||||| |  |||||| ||||||    
T  7670908 ttttggtgttaggtggggatacctcatgtatacggtagtcattttcacctttgggtgtaccgtaaatatacggcacctt 7670986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 329 - 407
Target Start/End: Original strand, 27924066 - 27924144
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacacctt 407  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||| | || ||  |||||||||| |||||| ||||||    
T  27924066 ttttggtgttaggcgggcgttcctcatgtatacggtagtcatttttacctttggatgtaccgcatatatacggcacctt 27924144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 22986658 - 22986593
Alignment:
Q  345 gggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    ||||| ||||||||||||||||||||||||| || || ||||||||||| |||||||||| |||||    
T  22986658 gggtttctcatgtatacggtagtcattttcacctatgggtgtaccgcatatatacgacactttgta 22986593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 241 - 298
Target Start/End: Original strand, 30853268 - 30853325
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgg 298  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||  |||||||||    
T  30853268 ggggcgtcccttagggggtgcaaacagctcaaacgagctgggcctccttcaaggatgg 30853325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 241 - 305
Target Start/End: Complemental strand, 16592909 - 16592845
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggcttcaa 305  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||   |||||||||| ||||    
T  16592909 ggggcgtccctgagggggtgcaaacagctcaaacgagctggacctcctttaaggatgggcctcaa 16592845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 241 - 300
Target Start/End: Complemental strand, 22987532 - 22987472
Alignment:
Q  241 ggggcgtccctgaggggg-tgcaaatagctcaaacgagctgggcctcccccaaggatgggc 300  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||| ||| |||||||    
T  22987532 ggggcgtccctgaggggggtgcaaacagctcaaacgagctgggcctccctcaaagatgggc 22987472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 410
Target Start/End: Complemental strand, 36868973 - 36868911
Alignment:
Q  348 ttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    |||||||||||||||||||| |||||||  | || ||||||| ||| ||||||||||||||||    
T  36868973 ttcctcatgtatacggtagtgattttcacatttgggtgtaccacatatatacgacaccttgta 36868911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 26719045 - 26718984
Alignment:
Q  349 tcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    ||||||||||| ||||||| ||||||| || |||||||| ||||| |||||||||| |||||    
T  26719045 tcctcatgtatgcggtagtgattttcacctttgagtgtatcgcatatatacgacactttgta 26718984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 26988789 - 26988728
Alignment:
Q  349 tcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    ||||||||||| ||||||| ||||||| || |||||||| ||||| |||||||||| |||||    
T  26988789 tcctcatgtatgcggtagtgattttcacctttgagtgtatcgcatatatacgacactttgta 26988728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 410
Target Start/End: Complemental strand, 14318484 - 14318420
Alignment:
Q  346 ggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    |||||||||||||||||||||| |||||||| | ||  |||| | ||| ||||||||||||||||    
T  14318484 ggttcctcatgtatacggtagtgattttcatttttggatgtatcacatatatacgacaccttgta 14318420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 350 - 410
Target Start/End: Complemental strand, 31194706 - 31194647
Alignment:
Q  350 cctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    |||||||||||||||||| ||||||| ||||| || |||||||| |||||| |||||||||    
T  31194706 cctcatgtatacggtagt-attttcacctctgggtttaccgcatatatacggcaccttgta 31194647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 456 - 488
Target Start/End: Complemental strand, 35676929 - 35676897
Alignment:
Q  456 tgaacttgagttttgttgggctggttatttatg 488  Q
    |||||||||||||||||||||||||||||||||    
T  35676929 tgaacttgagttttgttgggctggttatttatg 35676897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 346 - 410
Target Start/End: Complemental strand, 2530996 - 2530932
Alignment:
Q  346 ggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    |||||||||||||||| ||||| ||||||| || ||  ||||||| || |||||||||| |||||    
T  2530996 ggttcctcatgtatacagtagtgattttcacctttggatgtaccgtatatatacgacacattgta 2530932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 248 - 288
Target Start/End: Complemental strand, 16199083 - 16199043
Alignment:
Q  248 ccctgagggggtgcaaatagctcaaacgagctgggcctccc 288  Q
    ||||||||||||||||| |||||||  ||||||||||||||    
T  16199083 ccctgagggggtgcaaacagctcaacagagctgggcctccc 16199043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 241 - 305
Target Start/End: Complemental strand, 31194831 - 31194767
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggcttcaa 305  Q
    ||||||| || |||| |||||||| | ||||||||| ||||||||| | ||||||||||| ||||    
T  31194831 ggggcgttccagaggaggtgcaaacaactcaaacgaactgggcctctctcaaggatgggcctcaa 31194767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 350 - 410
Target Start/End: Complemental strand, 31881528 - 31881469
Alignment:
Q  350 cctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    |||||||||||||||||| |||||||||||||  ||| |||||| |||||| |||| ||||    
T  31881528 cctcatgtatacggtagt-attttcatctctggatgttccgcatatatacggcaccgtgta 31881469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 130; Significance: 4e-67; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 241 - 410
Target Start/End: Original strand, 37514560 - 37514729
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggcttcaagagtgggggttcctcataattgattttggtgttag 340  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||| |||||||||||||||||    
T  37514560 ggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctcctccaaggatgggcctcaagagtgggggtttctcatgattgattttggtgttag 37514659  T
Q  341 gtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    |||||| ||| |||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||    
T  37514660 gtggggattcttcatgtatacggtagtcattttcacctctgagtgtaccgcatatatacggcaccttgta 37514729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 253 - 410
Target Start/End: Original strand, 1105445 - 1105602
Alignment:
Q  253 agggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggcttcaagagtgggggttcctcataattgattttggtgttaggtgggggttcct 352  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||    
T  1105445 agggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagtgggggttcctcatgattgattttggtgttaggtgggggttgct 1105544  T
Q  353 catgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    |||||||| |||||||||||||| ||||  ||||||||||| ||||||| ||||||||    
T  1105545 catgtatatggtagtcattttcacctctaggtgtaccgcatatatacgataccttgta 1105602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 241 - 410
Target Start/End: Complemental strand, 5129047 - 5128879
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggcttcaagagtgggggttcctcataattgattttggtgttag 340  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||| ||| |||||||||||| |||||||| |||||||||||||||||    
T  5129047 ggggcgttcctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggataggcctcaagagtgggg-ttcctcatgattgattttggtgttag 5128949  T
Q  341 gtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    |||| |||||||||||||||||||||||||||||| ||||| ||| || |||| |||||| |||||||||    
T  5128948 gtggaggttcctcatgtatacggtagtcattttcacctctgggtgcactgcatatatacggcaccttgta 5128879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 241 - 410
Target Start/End: Original strand, 32915299 - 32915455
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggcttcaagagtgggggttcctcataattgattttggtgttag 340  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||             |||||||||||||| |||||| |||||||||||||||||    
T  32915299 ggggcgtccctgagggggtgcaaacagctcaaacgagttgggcctccc-------------tcaagagtgggggtccctcatgattgattttggtgttag 32915385  T
Q  341 gtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    ||||||||||||||||||||||||| ||||||| | ||||| ||||||| ||| |||||| |||||||||    
T  32915386 gtgggggttcctcatgtatacggtaatcatttttacctctgggtgtaccacatatatacggcaccttgta 32915455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 325 - 410
Target Start/End: Original strand, 10978885 - 10978970
Alignment:
Q  325 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||| ||||||||||||||||    
T  10978885 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacttctgggtgtaccgcatatatacgacaccttgta 10978970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 325 - 410
Target Start/End: Complemental strand, 38209713 - 38209628
Alignment:
Q  325 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||| |||||||||    
T  38209713 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgta 38209628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 325 - 410
Target Start/End: Original strand, 47128972 - 47129057
Alignment:
Q  325 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||| |||||| |||||||||    
T  47128972 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacggcaccttgta 47129057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 325 - 407
Target Start/End: Complemental strand, 34768696 - 34768614
Alignment:
Q  325 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacacctt 407  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||| |||||| ||||||    
T  34768696 ttgattttggtgttaggtgggggttcctcatgtatacggtaatcattttcacctctgggtgtaccgcatatatacggcacctt 34768614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 325 - 410
Target Start/End: Original strand, 13460192 - 13460277
Alignment:
Q  325 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||  |||| || |||||||| ||||||||||||||||    
T  13460192 ttgattttggtgttaggtgggggttccttatgtatacggtagtcattttcacatctgggtataccgcatatatacgacaccttgta 13460277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 329 - 407
Target Start/End: Original strand, 34027568 - 34027646
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacacctt 407  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| || || ||||||||||| |||||||||||||    
T  34027568 ttttggtgttaggtgggggttcctcatgtataccgtagtcattttcacctttgggtgtaccgcatatatacgacacctt 34027646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 325 - 410
Target Start/End: Original strand, 48209225 - 48209310
Alignment:
Q  325 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||||  |||| ||||||||||| |||||| |||||||||    
T  48209225 ttgattttggtgttaggtgggggtttctcatgtatacggtagtcatattcacatctgggtgtaccgcatatatacggcaccttgta 48209310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 334 - 410
Target Start/End: Original strand, 54780771 - 54780847
Alignment:
Q  334 gtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    |||||||||||||||||||||||||||||||||||||||||| || || ||||||||||| |||||| |||||||||    
T  54780771 gtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttgta 54780847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 325 - 399
Target Start/End: Complemental strand, 23509920 - 23509846
Alignment:
Q  325 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatac 399  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||  ||||||||||| |||||    
T  23509920 ttgattttggtgttaggtgggggttcctcatgtctacggtagtcattttcacctctaggtgtaccgcatatatac 23509846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 329 - 407
Target Start/End: Original strand, 32128573 - 32128651
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacacctt 407  Q
    ||||||||||||||||||||| || |||||||||||||||||||||| || || ||||||||||| |||||||||||||    
T  32128573 ttttggtgttaggtgggggtttcttatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacacctt 32128651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 329 - 407
Target Start/End: Original strand, 40089505 - 40089583
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacacctt 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || ||  |||||||||| |||||| ||||||    
T  40089505 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttggatgtaccgcatatatacggcacctt 40089583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 333 - 407
Target Start/End: Complemental strand, 43455645 - 43455571
Alignment:
Q  333 ggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacacctt 407  Q
    ||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||| |||||| ||||||    
T  43455645 ggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcacctt 43455571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 329 - 407
Target Start/End: Complemental strand, 54083360 - 54083282
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacacctt 407  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||| || ||||||||||| |||||| ||||||    
T  54083360 ttttggtgttaggtaggggttcctcatgtatacggtagtcatttttatctttgggtgtaccgcatatatacggcacctt 54083282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 241 - 305
Target Start/End: Complemental strand, 10431506 - 10431442
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggcttcaa 305  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||    
T  10431506 ggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 10431442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 325 - 381
Target Start/End: Original strand, 55255254 - 55255310
Alignment:
Q  325 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctg 381  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  55255254 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctg 55255310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 241 - 300
Target Start/End: Original strand, 55255082 - 55255141
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggc 300  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  55255082 ggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggc 55255141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 329 - 407
Target Start/End: Original strand, 16845010 - 16845088
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacacctt 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |  || ||||||  ||| |||||||||||||    
T  16845010 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcaccgttgggtgtactacatatatacgacacctt 16845088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 329 - 391
Target Start/End: Original strand, 24969426 - 24969488
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgc 391  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||    
T  24969426 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgc 24969488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 329 - 407
Target Start/End: Complemental strand, 37777341 - 37777263
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacacctt 407  Q
    |||||||||||| || ||||||||||||||||||||||||||||||| || || ||||||||||| |||||| ||||||    
T  37777341 ttttggtgttagttgagggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcacctt 37777263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 329 - 410
Target Start/End: Complemental strand, 35779443 - 35779362
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    ||||| |||||||||  |||||||||||||||||||| ||||||||| || || ||||||||||| ||||||||||||||||    
T  35779443 ttttgatgttaggtgaaggttcctcatgtatacggtaatcattttcacctttgggtgtaccgcatatatacgacaccttgta 35779362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 241 - 305
Target Start/End: Original strand, 47127983 - 47128047
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggcttcaa 305  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||| ||||    
T  47127983 ggggcgtccctgagggggtgcaaacagcccaaacgagctgggcctccctcaaggatgggcctcaa 47128047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 337 - 400
Target Start/End: Complemental strand, 2790851 - 2790788
Alignment:
Q  337 ttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacg 400  Q
    ||||||||||||||||||||||||||||||||||||||| || || ||||||||||| ||||||    
T  2790851 ttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacg 2790788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 242 - 305
Target Start/End: Original strand, 17679220 - 17679283
Alignment:
Q  242 gggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggcttcaa 305  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||| ||||    
T  17679220 gggcgtccctgagggggtgcaaacagctcaaacgagctgagcctccctcaaggatgggcctcaa 17679283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 325 - 375
Target Start/End: Complemental strand, 10428327 - 10428277
Alignment:
Q  325 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttca 375  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  10428327 ttgattttggtgttaggtggaggttcctcatgtatacggtagtcattttca 10428277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 329 - 391
Target Start/End: Complemental strand, 38352373 - 38352311
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgc 391  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| || || |||||||||    
T  38352373 ttttggtgttaggtgggggttcctcatgtacacggtagtcattttcacctttgggtgtaccgc 38352311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 329 - 393
Target Start/End: Original strand, 19498493 - 19498557
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcat 393  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| || ||  ||||||||||    
T  19498493 ttttggtgttaggtgggggttcctcatgtatacagtagtcattttcacctttggctgtaccgcat 19498557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 241 - 305
Target Start/End: Complemental strand, 45560768 - 45560704
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggcttcaa 305  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||| ||| ||||||| ||||    
T  45560768 ggggcgtccttgagggggtgcaaacagctcaaacgagctgggcctccctcaaagatgggcctcaa 45560704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 238 - 305
Target Start/End: Original strand, 13459783 - 13459850
Alignment:
Q  238 tctggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggcttcaa 305  Q
    |||||||||| |||||||||||||||| ||||||||||||||| |||||||  |||||||||| ||||    
T  13459783 tctggggcgttcctgagggggtgcaaacagctcaaacgagctgagcctcccttaaggatgggcctcaa 13459850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 242 - 305
Target Start/End: Original strand, 48208453 - 48208516
Alignment:
Q  242 gggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggcttcaa 305  Q
    |||| |||||||||||||||||| |||||||||||| |||||||||| ||||||||||| ||||    
T  48208453 gggcatccctgagggggtgcaaacagctcaaacgagttgggcctccctcaaggatgggcctcaa 48208516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 305
Target Start/End: Complemental strand, 27596696 - 27596639
Alignment:
Q  248 ccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggcttcaa 305  Q
    |||||||||||||| || ||||||||||||||||||||||||| ||||||||| ||||    
T  27596696 ccctgagggggtgcgaacagctcaaacgagctgggcctcccccgaggatgggcctcaa 27596639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 258 - 305
Target Start/End: Complemental strand, 9579516 - 9579469
Alignment:
Q  258 gtgcaaatagctcaaacgagctgggcctcccccaaggatgggcttcaa 305  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  9579516 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcttcaa 9579469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 258 - 305
Target Start/End: Complemental strand, 9585211 - 9585164
Alignment:
Q  258 gtgcaaatagctcaaacgagctgggcctcccccaaggatgggcttcaa 305  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  9585211 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcttcaa 9585164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 329 - 400
Target Start/End: Original strand, 35465096 - 35465167
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacg 400  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||  | |  ||||||||||| ||||||    
T  35465096 ttttggtgttaggtggggattcctcatgtatacggtagttattttcacttttaggtgtaccgcatatatacg 35465167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 255 - 305
Target Start/End: Complemental strand, 34769583 - 34769533
Alignment:
Q  255 ggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggcttcaa 305  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||| ||||    
T  34769583 ggggtgcaaatagctcaaacgagttgggcctccctcaaggatgggcctcaa 34769533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 248 - 298
Target Start/End: Original strand, 54779450 - 54779500
Alignment:
Q  248 ccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgg 298  Q
    ||||||||| ||||||| ||||||| |||||||||||||||||||||||||    
T  54779450 ccctgagggagtgcaaacagctcaaccgagctgggcctcccccaaggatgg 54779500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 233 - 286
Target Start/End: Original strand, 10978138 - 10978191
Alignment:
Q  233 tatgatctggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctc 286  Q
    ||||||| |||||||||||||| ||||||||| ||||||||||||||| |||||    
T  10978138 tatgatcaggggcgtccctgagagggtgcaaacagctcaaacgagctgcgcctc 10978191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 38209891 - 38209846
Alignment:
Q  255 ggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggc 300  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||    
T  38209891 ggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggc 38209846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 242 - 283
Target Start/End: Complemental strand, 23510963 - 23510922
Alignment:
Q  242 gggcgtccctgagggggtgcaaatagctcaaacgagctgggc 283  Q
    ||||||||||||||||||||||| ||||||||||| ||||||    
T  23510963 gggcgtccctgagggggtgcaaacagctcaaacgaactgggc 23510922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 252 - 305
Target Start/End: Complemental strand, 35780609 - 35780556
Alignment:
Q  252 gagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggcttcaa 305  Q
    ||||||||||||| ||||||| |||||||||||||||||| |||| ||| ||||    
T  35780609 gagggggtgcaaacagctcaaccgagctgggcctcccccacggataggcctcaa 35780556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 410
Target Start/End: Complemental strand, 4167992 - 4167928
Alignment:
Q  346 ggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    ||||||||||||||| |||||| ||||||| || || ||||| ||||| |||||| |||||||||    
T  4167992 ggttcctcatgtataaggtagtgattttcacctttgggtgtatcgcatatatacggcaccttgta 4167928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 410
Target Start/End: Complemental strand, 36118559 - 36118495
Alignment:
Q  346 ggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    |||| ||||||||||||||||| |||||||| | || ||||| | ||| ||||||||||||||||    
T  36118559 ggttactcatgtatacggtagtgattttcatatttgggtgtatcacatatatacgacaccttgta 36118495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 329 - 375
Target Start/End: Complemental strand, 16882513 - 16882467
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttca 375  Q
    ||||||||||||||| ||||||| |||  ||||||||||||||||||    
T  16882513 ttttggtgttaggtgagggttccccatacatacggtagtcattttca 16882467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 305
Target Start/End: Original strand, 19498322 - 19498379
Alignment:
Q  248 ccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggcttcaa 305  Q
    |||||| ||||||||||||||||||  | ||||||||||||||||  |||||| ||||    
T  19498322 ccctgacggggtgcaaatagctcaacagtgctgggcctcccccaatcatgggcctcaa 19498379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 325 - 353
Target Start/End: Complemental strand, 9578761 - 9578733
Alignment:
Q  325 ttgattttggtgttaggtgggggttcctc 353  Q
    |||||||||||||||||||||||||||||    
T  9578761 ttgattttggtgttaggtgggggttcctc 9578733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 248 - 288
Target Start/End: Original strand, 24969251 - 24969291
Alignment:
Q  248 ccctgagggggtgcaaatagctcaaacgagctgggcctccc 288  Q
    ||||||||||||||||| |||||||  ||||||||||||||    
T  24969251 ccctgagggggtgcaaacagctcaacagagctgggcctccc 24969291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 130; Significance: 4e-67; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 241 - 410
Target Start/End: Original strand, 7162679 - 7162848
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggcttcaagagtgggggttcctcataattgattttggtgttag 340  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  7162679 ggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctcccacaaggatgggcctcaagagtgggggttcctcatgattgattttggtgttag 7162778  T
Q  341 gtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    || |||||||||||| ||||||||||||||||||| |||||||| |||||||| |||||| |||||||||    
T  7162779 gtaggggttcctcatatatacggtagtcattttcacctctgagtataccgcatatatacggcaccttgta 7162848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 241 - 410
Target Start/End: Original strand, 3952901 - 3953070
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggcttcaagagtgggggttcctcataattgattttggtgttag 340  Q
    |||| ||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  3952901 ggggtgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagtgggggttcctcatgattgattttggtgttag 3953000  T
Q  341 gtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    |||||||||||||||| |||||||| ||||||||| ||||| |||||||||||||||||| |||||||||    
T  3953001 gtgggggttcctcatgcatacggtaatcattttcacctctgggtgtaccgcatgtatacggcaccttgta 3953070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 325 - 410
Target Start/End: Original strand, 3155196 - 3155281
Alignment:
Q  325 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||| |||||| |||||||||    
T  3155196 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctaggtgtaccgcatatatacggcaccttgta 3155281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 325 - 410
Target Start/End: Original strand, 4505873 - 4505958
Alignment:
Q  325 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||| |||||| |||||||||    
T  4505873 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacggcaccttgta 4505958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 325 - 410
Target Start/End: Original strand, 6964986 - 6965071
Alignment:
Q  325 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||| ||| |||||    
T  6964986 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcactttgta 6965071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 325 - 410
Target Start/End: Complemental strand, 12337571 - 12337486
Alignment:
Q  325 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||| |||| |||||||||||    
T  12337571 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccacatatatatgacaccttgta 12337486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 329 - 410
Target Start/End: Complemental strand, 29939981 - 29939900
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| || || ||||||||||| ||||||||||||||||    
T  29939981 ttttggtgttaggtggtggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttgta 29939900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 325 - 410
Target Start/End: Complemental strand, 8907202 - 8907117
Alignment:
Q  325 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||| ||||||||||| |||||| | |||||||    
T  8907202 ttgattttggtgttaggtgggggtttctcatgtatacggtagtcatttttacctctgggtgtaccgcatatatacggcgccttgta 8907117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 329 - 407
Target Start/End: Original strand, 9046012 - 9046090
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacacctt 407  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| || || ||||||||||| |||||| ||||||    
T  9046012 tttttgtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcacctt 9046090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 240 - 300
Target Start/End: Original strand, 6964793 - 6964853
Alignment:
Q  240 tggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggc 300  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  6964793 tggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggc 6964853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 241 - 300
Target Start/End: Original strand, 3155005 - 3155064
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggc 300  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  3155005 ggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggc 3155064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 329 - 407
Target Start/End: Original strand, 24410419 - 24410498
Alignment:
Q  329 ttttggtgttaggtgggg-gttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacacctt 407  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| || || ||||||||||| |||||| ||||||    
T  24410419 ttttggtgttaggtggggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcacctt 24410498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 329 - 407
Target Start/End: Original strand, 26716111 - 26716189
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacacctt 407  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| || || ||||||||||| |||| | ||||||    
T  26716111 tttttgtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatatggcacctt 26716189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 330 - 399
Target Start/End: Complemental strand, 10762683 - 10762614
Alignment:
Q  330 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatac 399  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || || ||||||| ||| |||||    
T  10762683 tttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccacatatatac 10762614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 241 - 305
Target Start/End: Complemental strand, 12337753 - 12337689
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggcttcaa 305  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||| ||||    
T  12337753 ggggcgtccctgagggggtgcaaacagctcaaacgagctgagcctccctcaaggatgggcctcaa 12337689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 241 - 305
Target Start/End: Original strand, 40635964 - 40636028
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggcttcaa 305  Q
    ||||||||||| |||||||||||| |||||||||||| |||||||||| ||||||||||||||||    
T  40635964 ggggcgtccctaagggggtgcaaacagctcaaacgagttgggcctccctcaaggatgggcttcaa 40636028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 241 - 300
Target Start/End: Original strand, 4505681 - 4505740
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggc 300  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||    
T  4505681 ggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaatgatgggc 4505740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 241 - 300
Target Start/End: Original strand, 34693149 - 34693208
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggc 300  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||    
T  34693149 ggggcgtccctgagggggtgcaaacagctcaaacgagttgggcctccctcaaggatgggc 34693208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 241 - 300
Target Start/End: Original strand, 34715561 - 34715620
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggc 300  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||    
T  34715561 ggggcgtccctgagggggtgcaaacagctcaaacgagttgggcctccctcaaggatgggc 34715620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 329 - 407
Target Start/End: Complemental strand, 27506859 - 27506781
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacacctt 407  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||| | || || ||||||| ||| |||||| ||||||    
T  27506859 ttttggtgttaggtgggagttcctcatgtatacagtagtcatttttacctttgggtgtaccacatatatacggcacctt 27506781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 241 - 300
Target Start/End: Original strand, 3399511 - 3399570
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggc 300  Q
    ||||||||| |||||||||||||| |||||||||||| ||| |||||| |||||||||||    
T  3399511 ggggcgtccttgagggggtgcaaacagctcaaacgagttggacctccctcaaggatgggc 3399570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 8907391 - 8907335
Alignment:
Q  243 ggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatggg 299  Q
    |||||||||||||||||||||| ||||||||| |||||| |||||| ||| ||||||    
T  8907391 ggcgtccctgagggggtgcaaacagctcaaacaagctggacctccctcaaagatggg 8907335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 346 - 410
Target Start/End: Original strand, 38400798 - 38400862
Alignment:
Q  346 ggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    |||||||||||||||||||||| ||||||| || ||| |||| ||||| |||| |||||||||||    
T  38400798 ggttcctcatgtatacggtagtgattttcacctttgaatgtatcgcatatatatgacaccttgta 38400862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 239 - 286
Target Start/End: Complemental strand, 5952995 - 5952949
Alignment:
Q  239 ctggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctc 286  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||    
T  5952995 ctggggcgtccctgagggg-tgcaaacagctcaaacgagctgggcctc 5952949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 410
Target Start/End: Complemental strand, 11952708 - 11952644
Alignment:
Q  346 ggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    |||||||||||||| | ||||| |||||||||| |||||||| | ||| |||||||||| |||||    
T  11952708 ggttcctcatgtatgcagtagtgattttcatctatgagtgtatcacatatatacgacactttgta 11952644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 410
Target Start/End: Original strand, 37182670 - 37182734
Alignment:
Q  346 ggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    |||||||||||||||||||||| |||||||  | || |||||  |||| ||||||||||||||||    
T  37182670 ggttcctcatgtatacggtagtgattttcacttttgggtgtattgcatatatacgacaccttgta 37182734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 241 - 305
Target Start/End: Complemental strand, 41213992 - 41213928
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggcttcaa 305  Q
    ||||| ||| |||||||||||||| |||| |||||||||||| ||||| | ||||||||| ||||    
T  41213992 ggggcatccttgagggggtgcaaacagcttaaacgagctgggtctccctcgaggatgggcctcaa 41213928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 245 - 288
Target Start/End: Complemental strand, 27507035 - 27506992
Alignment:
Q  245 cgtccctgagggggtgcaaatagctcaaacgagctgggcctccc 288  Q
    |||||||||||||||||||| |||||||  ||||||||||||||    
T  27507035 cgtccctgagggggtgcaaacagctcaacagagctgggcctccc 27506992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 346 - 410
Target Start/End: Original strand, 16097008 - 16097072
Alignment:
Q  346 ggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    ||||||||||||||| |||||| ||||||| || || ||||||  ||| |||||| |||||||||    
T  16097008 ggttcctcatgtataaggtagtaattttcacctttgggtgtacatcatatatacggcaccttgta 16097072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 248 - 288
Target Start/End: Original strand, 26715940 - 26715980
Alignment:
Q  248 ccctgagggggtgcaaatagctcaaacgagctgggcctccc 288  Q
    ||||||||||||||||| |||||||  ||||||||||||||    
T  26715940 ccctgagggggtgcaaacagctcaacagagctgggcctccc 26715980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 346 - 410
Target Start/End: Complemental strand, 28425812 - 28425748
Alignment:
Q  346 ggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    |||||||||| |||| |||||| |||||||  | || |||||| |||| ||||||||||||||||    
T  28425812 ggttcctcatatatatggtagtgattttcacatttgggtgtactgcatatatacgacaccttgta 28425748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 102; Significance: 2e-50; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 241 - 410
Target Start/End: Complemental strand, 37430365 - 37430196
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggcttcaagagtgggggttcctcataattgattttggtgttag 340  Q
    ||||||||| |||||||||||||| |||||||||||| ||||||| ||  |||||||||| ||||||||||||||||||||| ||||||||||||||||     
T  37430365 ggggcgtccttgagggggtgcaaacagctcaaacgagttgggccttccttaaggatgggcctcaagagtgggggttcctcatgattgattttggtgttac 37430266  T
Q  341 gtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    ||| ||||||||||||||||||||||||||||| | ||||  ||||| ||||| |||||| |||||||||    
T  37430265 gtgagggttcctcatgtatacggtagtcatttttacctctaggtgtaacgcatatatacggcaccttgta 37430196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 241 - 342
Target Start/End: Complemental strand, 20003940 - 20003839
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggcttcaagagtgggggttcctcataattgattttggtgttag 340  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  20003940 ggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagtgggggttcctcatgattgattttggtgttag 20003841  T
Q  341 gt 342  Q
    ||    
T  20003840 gt 20003839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 325 - 410
Target Start/End: Complemental strand, 2952344 - 2952259
Alignment:
Q  325 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||| |||||    
T  2952344 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcactttgta 2952259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 325 - 410
Target Start/End: Original strand, 30883309 - 30883394
Alignment:
Q  325 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||| ||| |||||    
T  30883309 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcacattgta 30883394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 325 - 400
Target Start/End: Complemental strand, 13534809 - 13534734
Alignment:
Q  325 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacg 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||    
T  13534809 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacg 13534734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 325 - 400
Target Start/End: Complemental strand, 13624349 - 13624274
Alignment:
Q  325 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacg 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||    
T  13624349 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctctgggtgtaccgcatatatacg 13624274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 325 - 410
Target Start/End: Complemental strand, 3048640 - 3048555
Alignment:
Q  325 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||  ||||||||||| |||||| |||||||||    
T  3048640 ttgattttggtgttaggtgagggttcctcgtgtatacggtagtcattttcatctctaggtgtaccgcatatatacggcaccttgta 3048555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 329 - 410
Target Start/End: Original strand, 45475801 - 45475882
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||| |||||| |||||||||    
T  45475801 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctatgggtgtaccgcatatatacggcaccttgta 45475882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 325 - 410
Target Start/End: Complemental strand, 5860867 - 5860782
Alignment:
Q  325 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    |||||||||||||||||| |||||| |||||||||| |||||||||||||| ||||| ||||||||||| |||||| |||||||||    
T  5860867 ttgattttggtgttaggttggggtttctcatgtatatggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgta 5860782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 329 - 407
Target Start/End: Original strand, 10917375 - 10917453
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacacctt 407  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| || || ||||||||||| |||||| ||||||    
T  10917375 ttttggtgttaggtgggggttcctcatgtataaggtagtcattttcacctttgggtgtaccgcatatatacggcacctt 10917453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 329 - 407
Target Start/End: Complemental strand, 23606748 - 23606670
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacacctt 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | || || ||||||||||| |||||| ||||||    
T  23606748 ttttggtgttaggtgggggttcctcatgtatacggtagtcatttttacctttgggtgtaccgcatatatacggcacctt 23606670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 329 - 407
Target Start/End: Complemental strand, 23798380 - 23798302
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacacctt 407  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  | || ||||||||||| |||||| ||||||    
T  23798380 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacttttgggtgtaccgcatatatacggcacctt 23798302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 329 - 407
Target Start/End: Original strand, 42600766 - 42600844
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacacctt 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||| ||| |||||| ||||||    
T  42600766 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccacatatatacggcacctt 42600844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 241 - 300
Target Start/End: Complemental strand, 2952536 - 2952477
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggc 300  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  2952536 ggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggc 2952477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 241 - 300
Target Start/End: Complemental strand, 5861059 - 5861000
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggc 300  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  5861059 ggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggc 5861000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 325 - 410
Target Start/End: Original strand, 41879161 - 41879246
Alignment:
Q  325 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||| || ||  |||||||||| ||||||  ||||||||    
T  41879161 ttgattttggtgttaggtgggggtttctcatgtattcggtagtcattttcacctttggatgtaccgcatatatacggtaccttgta 41879246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 241 - 300
Target Start/End: Original strand, 30883112 - 30883171
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggc 300  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||    
T  30883112 ggggcgtccctgagtgggtgcaaacagctcaaacgagctgggcctccctcaaggatgggc 30883171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 241 - 300
Target Start/End: Complemental strand, 3048837 - 3048778
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggc 300  Q
    |||||||  ||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  3048837 ggggcgtttctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggc 3048778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 249 - 305
Target Start/End: Original strand, 45472201 - 45472257
Alignment:
Q  249 cctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgggcttcaa 305  Q
    |||||||||||||||| ||||||| ||||||||||| ||||||||||||||| ||||    
T  45472201 cctgagggggtgcaaacagctcaaccgagctgggccacccccaaggatgggcctcaa 45472257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 346 - 410
Target Start/End: Original strand, 5942697 - 5942761
Alignment:
Q  346 ggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    |||||||||||||||||||||| ||||||| || || ||||||||||  ||||||||| ||||||    
T  5942697 ggttcctcatgtatacggtagtgattttcacctttgggtgtaccgcacatatacgacatcttgta 5942761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 346 - 410
Target Start/End: Original strand, 11290185 - 11290249
Alignment:
Q  346 ggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    |||| ||||||||||||||||| ||||||| || |||||||||  ||| ||||||||||||||||    
T  11290185 ggttgctcatgtatacggtagtgattttcacctttgagtgtacaacatatatacgacaccttgta 11290249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 241 - 297
Target Start/End: Original strand, 41878167 - 41878223
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatg 297  Q
    ||||||||| |||||||||||||| |||||||||||| || ||||||| ||||||||    
T  41878167 ggggcgtccttgagggggtgcaaacagctcaaacgagttgagcctccctcaaggatg 41878223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 410
Target Start/End: Complemental strand, 5973209 - 5973145
Alignment:
Q  346 ggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    |||||||| ||||||||||| | |||||||||| || ||||||  ||| ||||||||||||||||    
T  5973209 ggttcctcgtgtatacggtaatgattttcatctatgggtgtacaacatatatacgacaccttgta 5973145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 410
Target Start/End: Complemental strand, 7944624 - 7944560
Alignment:
Q  346 ggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    |||||||||||||||||||||| ||||||| || || ||||||  ||| |||||| |||||||||    
T  7944624 ggttcctcatgtatacggtagtgattttcacctttgggtgtacaacatatatacggcaccttgta 7944560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 410
Target Start/End: Complemental strand, 39332507 - 39332443
Alignment:
Q  346 ggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    |||||||||||||||||||||| ||||||| || ||  |||||||| | |||| |||||||||||    
T  39332507 ggttcctcatgtatacggtagtgattttcacctttggatgtaccgcttatatatgacaccttgta 39332443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 245 - 288
Target Start/End: Original strand, 42600590 - 42600633
Alignment:
Q  245 cgtccctgagggggtgcaaatagctcaaacgagctgggcctccc 288  Q
    |||||||||||||||||||| |||||||  ||||||||||||||    
T  42600590 cgtccctgagggggtgcaaacagctcaacagagctgggcctccc 42600633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 346 - 410
Target Start/End: Original strand, 8102913 - 8102977
Alignment:
Q  346 ggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    |||||||||||||||||||| | ||||||| || |  ||||||||||| |||||  |||||||||    
T  8102913 ggttcctcatgtatacggtaatgattttcacctttaggtgtaccgcatatatactgcaccttgta 8102977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 448
Target Start/End: Original strand, 45475973 - 45476001
Alignment:
Q  420 gagcctccgaattctcagggatggccctg 448  Q
    |||||||||||||||||||||||||||||    
T  45475973 gagcctccgaattctcagggatggccctg 45476001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 85; Significance: 3e-40; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 277 - 393
Target Start/End: Original strand, 181851 - 181967
Alignment:
Q  277 gctgggcctcccccaaggatgggcttcaagagtgggggttcctcataattgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcat 376  Q
    |||||||||||| ||||||||||  ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||     
T  181851 gctgggcctccctcaaggatgggtctcaagagtgggggttcctcatgattgattttggtgttagatgggggttcctcatgtatacggtagtcattttcac 181950  T
Q  377 ctctgagtgtaccgcat 393  Q
    |||||  ||||||||||    
T  181951 ctctggatgtaccgcat 181967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 241 - 284
Target Start/End: Original strand, 181437 - 181480
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcc 284  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  181437 ggggcgtccctgagggggtgcaaacagctcaaacgagctgggcc 181480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 325 - 410
Target Start/End: Original strand, 1323 - 1408
Alignment:
Q  325 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| || ||||||    
T  1323 ttgattttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcagcttgta 1408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 241 - 298
Target Start/End: Original strand, 1013 - 1070
Alignment:
Q  241 ggggcgtccctgagggggtgcaaatagctcaaacgagctgggcctcccccaaggatgg 298  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  1013 ggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgg 1070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 329 - 407
Target Start/End: Original strand, 106522 - 106600
Alignment:
Q  329 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacacctt 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||| |||||||||||||    
T  106522 ttttggtgttaggtgggggttcctcatgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacacctt 106600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 346 - 410
Target Start/End: Complemental strand, 206591 - 206527
Alignment:
Q  346 ggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    |||||||||||||||||||||| ||||||| |  || ||||||||||| ||||||||||||||||    
T  206591 ggttcctcatgtatacggtagtgattttcaccattgggtgtaccgcatatatacgacaccttgta 206527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1590 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold1590
Description:

Target: scaffold1590; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 346 - 410
Target Start/End: Complemental strand, 360 - 296
Alignment:
Q  346 ggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    ||||| |||||||||||||||| |||||||  | || ||||||||||| ||||||||||||||||    
T  360 ggttcatcatgtatacggtagtgattttcacatttgggtgtaccgcatatatacgacaccttgta 296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 410
Target Start/End: Original strand, 16028 - 16092
Alignment:
Q  346 ggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    |||| ||||||||||||||||| |||||||||| ||  ||||||||||  |||||||| ||||||    
T  16028 ggtttctcatgtatacggtagtgattttcatctttggatgtaccgcatacatacgacatcttgta 16092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 410
Target Start/End: Original strand, 38926 - 38990
Alignment:
Q  346 ggttcctcatgtatacggtagtcattttcatctctgagtgtaccgcatgtatacgacaccttgta 410  Q
    |||||||||| ||||||||||| |||||||  | || ||||| ||||| ||||||||||||||||    
T  38926 ggttcctcatatatacggtagtgattttcacatttgtgtgtatcgcatatatacgacaccttgta 38990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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