View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19372_low_21 (Length: 389)
Name: NF19372_low_21
Description: NF19372
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19372_low_21 |
 |  |
|
| [»] scaffold0154 (1 HSPs) |
 |  |  |
|
| [»] scaffold0501 (1 HSPs) |
 |  |  |
|
| [»] scaffold0148 (1 HSPs) |
 |  |  |
|
| [»] scaffold0002 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr6 (Bit Score: 285; Significance: 1e-160; HSPs: 10)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 18 - 314
Target Start/End: Complemental strand, 1196445 - 1196149
Alignment:
| Q |
18 |
cagacacgataggtgatcttcctcaagctccatttatgctctgaaatcaacaacataaaagactgttgaattgagcaatattttatatcgtgaatgtagg |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
1196445 |
cagacacgataggtgatcttcctcaagctccatttatgttctgaaatcaacaacataaaagactgttgaattgggcaatattttatatcgtgaatgtagg |
1196346 |
T |
 |
| Q |
118 |
taaatcaaaatcttaaatatatatatcaaaatagacctagtcttctgaaacccttaaaagtcctcttccgaaacagaccatgaagaatttcgtagttatg |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1196345 |
taaatcaaaatcttaaatatatatatcaaaatagacctagtcttctgaaacccttaaaagtcctcttccgaaacagaccatgaagaatttcgtagttatg |
1196246 |
T |
 |
| Q |
218 |
tataaattttaaagtggtctttgtttttgagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcatat |
314 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1196245 |
tataaatttcaaagtggtctttgtttttgagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcatat |
1196149 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 18 - 221
Target Start/End: Complemental strand, 1185476 - 1185272
Alignment:
| Q |
18 |
cagacacgataggtgatcttcctcaagctccatttatgctctgaaatcaacaacataaaagactgttgaattgagcaatattttatatcgtgaatgtagg |
117 |
Q |
| |
|
||||| |||||| ||||||||| ||||||||||||||| ||||||||||| |||||||| ||||||||||||| | ||||| ||||||| |||||||||| |
|
|
| T |
1185476 |
cagactcgatagttgatcttccacaagctccatttatgttctgaaatcaaaaacataaatgactgttgaattgggaaatatcttatatcttgaatgtagg |
1185377 |
T |
 |
| Q |
118 |
taaatcaaaatcttaaatatatatatcaaaatagacctagtcttctgaaacccttaaaagtcctcttccgaaacagacc---atgaagaatttcgtagtt |
214 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| || | ||||||| ||||| |
|
|
| T |
1185376 |
taaatcaaaatcttaaatat--atatcaaaatagacctagtcttttgaaacccttaaaagtcctcttccgaaacggaccgtaattaggaatttcatagtt |
1185279 |
T |
 |
| Q |
215 |
atgtata |
221 |
Q |
| |
|
||||||| |
|
|
| T |
1185278 |
atgtata |
1185272 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 246 - 312
Target Start/End: Complemental strand, 29383739 - 29383673
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||| |
|
|
| T |
29383739 |
gagtagtgttatttgaacaagcaaatgagacaatttatgtgacaacttcttttttctctcttttcat |
29383673 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 246 - 309
Target Start/End: Original strand, 31517069 - 31517132
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctctttt |
309 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
31517069 |
gagtagtgttatttgaacaactaaatgagacaacttatgtgacaacttcttttttctctctttt |
31517132 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 1180103 - 1180052
Alignment:
| Q |
18 |
cagacacgataggtgatcttcctcaagctccatttatgctctgaaatcaaca |
69 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
1180103 |
cagacacgataggtgatcttcctcaagctccatttatgttctgaaatcaaca |
1180052 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 246 - 309
Target Start/End: Original strand, 31480725 - 31480788
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctctttt |
309 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||| |
|
|
| T |
31480725 |
gagtagtgttatttgaacaactaaatgagacaatttatgtgacaacttcttttttctctctttt |
31480788 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 246 - 309
Target Start/End: Original strand, 10387706 - 10387769
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctctttt |
309 |
Q |
| |
|
||||| ||||||||||||||||| |||||| ||||| |||||||| ||||||||||| |||||| |
|
|
| T |
10387706 |
gagtaatgttatttgaacaatcatatgagataacttttgtgataatttcttttttctatctttt |
10387769 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 312
Target Start/End: Complemental strand, 17457617 - 17457551
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||||||| ||||||||||||||| ||||||||||| |||| ||| || |||||||| | ||||||| |
|
|
| T |
17457617 |
gagtagtgatatttgaacaatcaattgagacaacttttgtggtaattttttttttcttttttttcat |
17457551 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 283
Target Start/End: Complemental strand, 8395508 - 8395470
Alignment:
| Q |
245 |
tgagtagtgttatttgaacaatcaaatgagacaacttat |
283 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |||| |
|
|
| T |
8395508 |
tgagtagtgttatttgaacaatcatatgagacaatttat |
8395470 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 309
Target Start/End: Complemental strand, 11785549 - 11785476
Alignment:
| Q |
237 |
tttgtttttgagtagtgttatttgaacaa-tcaaatgagacaacttatgtgataacttcttttttctctctttt |
309 |
Q |
| |
|
|||||| | |||||||| ||||||||||| ||| | ||||||||||||||| ||||| |||||||||| |||| |
|
|
| T |
11785549 |
tttgttatagagtagtgatatttgaacaactcattttagacaacttatgtgacaacttgttttttctctttttt |
11785476 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 59; Significance: 7e-25; HSPs: 21)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 246 - 312
Target Start/End: Complemental strand, 3989087 - 3989021
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
3989087 |
gagtagtgttatttgaacaaccaaatgagacaacttatgtgacaacttcttttttctctcttttcat |
3989021 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 246 - 304
Target Start/End: Original strand, 37032991 - 37033049
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctct |
304 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |
|
|
| T |
37032991 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttttttttcctct |
37033049 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 246 - 306
Target Start/End: Original strand, 40604592 - 40604652
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctct |
306 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||| |
|
|
| T |
40604592 |
gagtagtgttatttgaacaaccaaatgagacaatttatgtgataatttcttttttctctct |
40604652 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 244 - 309
Target Start/End: Original strand, 21418479 - 21418544
Alignment:
| Q |
244 |
ttgagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctctttt |
309 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||| |||||| |
|
|
| T |
21418479 |
ttgagtagtgttatttgaacaactaaatgagacaacttatgtgacaacttattttttctatctttt |
21418544 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 40102206 - 40102139
Alignment:
| Q |
245 |
tgagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
||||||||||||||||||||| || |||||||||||| ||||| ||||| |||| ||||||||||||| |
|
|
| T |
40102206 |
tgagtagtgttatttgaacaaccatatgagacaacttttgtgacaacttattttctctctcttttcat |
40102139 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 252 - 312
Target Start/End: Complemental strand, 22767306 - 22767246
Alignment:
| Q |
252 |
tgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||||||||||||| | |||||||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
22767306 |
tgttatttgaacaaccgtatgagacaacttttgtgacaacttcttttttctctcttttcat |
22767246 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 246 - 312
Target Start/End: Original strand, 40413252 - 40413318
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||||||| ||||||||||| || ||| ||||||| | |||||||||||||||||||||||||||| |
|
|
| T |
40413252 |
gagtagtgatatttgaacaaccatttgatacaacttttatgataacttcttttttctctcttttcat |
40413318 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 244 - 312
Target Start/End: Original strand, 40713599 - 40713666
Alignment:
| Q |
244 |
ttgagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||||||||| |||||||||||||| |||||||| ||||| |||||||| |||||| ||||||||||| |
|
|
| T |
40713599 |
ttgagtagtgatatttgaacaatcatgtgagacaatttatgcgataactt-ttttttatctcttttcat |
40713666 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 241 - 312
Target Start/End: Original strand, 35633853 - 35633924
Alignment:
| Q |
241 |
tttttgagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
||||||||| ||||||||||||||| ||||||||| ||||||||||| || || | ||| |||| ||||||| |
|
|
| T |
35633853 |
tttttgagttgtgttatttgaacaaccaaatgagataacttatgtgacaatttttgtttcctcttttttcat |
35633924 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 246 - 281
Target Start/End: Complemental strand, 42996632 - 42996597
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaactt |
281 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
42996632 |
gagtagtgttatttgaacaatcaaatgagacaactt |
42996597 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 312
Target Start/End: Complemental strand, 23258214 - 23258148
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||||||| ||||||||||| || ||| |||| || ||||| |||||||||||||||||||||||| |
|
|
| T |
23258214 |
gagtagtgatatttgaacaaccatttgaaacaatttttgtgacaacttcttttttctctcttttcat |
23258148 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 275 - 312
Target Start/End: Complemental strand, 426254 - 426217
Alignment:
| Q |
275 |
acaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
426254 |
acaacttatgtgacaacttcttttttctctcttttcat |
426217 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 312
Target Start/End: Complemental strand, 24503101 - 24503033
Alignment:
| Q |
244 |
ttgagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||| |||||||||||||| || || ||||||||||| | ||| |||||| ||||||||||||||||| |
|
|
| T |
24503101 |
ttgattagtgttatttgaataaccatttgagacaacttttatgacaacttcatttttctctcttttcat |
24503033 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 312
Target Start/End: Original strand, 11223748 - 11223814
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||||||| ||||||||||||| ||||||||||| || | ||||||||||||||| |||||||| |
|
|
| T |
11223748 |
gagtagtgatatttgaacaatcttttgagacaacttttggtacaacttcttttttctcacttttcat |
11223814 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 312
Target Start/End: Original strand, 41344558 - 41344624
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||||||| |||||||||| || |||||||||| | |||||||||||||| ||||||||||||| |
|
|
| T |
41344558 |
gagtagtgatatttgaacatccatttgagacaactcttatgataacttcttttctctctcttttcat |
41344624 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 312
Target Start/End: Original strand, 26507825 - 26507858
Alignment:
| Q |
279 |
cttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
||||||||| |||||||||||||||||||||||| |
|
|
| T |
26507825 |
cttatgtgacaacttcttttttctctcttttcat |
26507858 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 309
Target Start/End: Complemental strand, 38779203 - 38779138
Alignment:
| Q |
245 |
tgagtagtgttatttgaacaa-tcaaatgagacaacttatgtgataacttcttttttctctctttt |
309 |
Q |
| |
|
||||||||| ||||||||||| ||| | |||||| |||||||| |||||||||||||||| |||| |
|
|
| T |
38779203 |
tgagtagtgatatttgaacaactcattttagacaatttatgtgacaacttcttttttctctatttt |
38779138 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 286
Target Start/End: Complemental strand, 16036749 - 16036709
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtg |
286 |
Q |
| |
|
|||| ||||||||||||||| |||||||||||| ||||||| |
|
|
| T |
16036749 |
gagtcgtgttatttgaacaaccaaatgagacaatttatgtg |
16036709 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 312
Target Start/End: Original strand, 21648814 - 21648886
Alignment:
| Q |
241 |
tttttgagtagtgttatttgaacaatcaaatgagacaacttat-gtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
||||||||||||| ||||| ||||| || ||||||||||| | |||| ||||| |||| ||||||||||||| |
|
|
| T |
21648814 |
tttttgagtagtgatattttaacaaccatttgagacaacttttggtgacaacttattttctctctcttttcat |
21648886 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 312
Target Start/End: Complemental strand, 27836332 - 27836296
Alignment:
| Q |
276 |
caacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||||||||||| |||||||||| ||||||||||||| |
|
|
| T |
27836332 |
caacttatgtgacaacttcttttctctctcttttcat |
27836296 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 309
Target Start/End: Complemental strand, 42047490 - 42047454
Alignment:
| Q |
273 |
agacaacttatgtgataacttcttttttctctctttt |
309 |
Q |
| |
|
|||||| |||||||| ||||||||||||||||||||| |
|
|
| T |
42047490 |
agacaatttatgtgacaacttcttttttctctctttt |
42047454 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 59; Significance: 7e-25; HSPs: 35)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 246 - 312
Target Start/End: Original strand, 24551116 - 24551182
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |
|
|
| T |
24551116 |
gagtagtgttatttgaacaatcaaatgagacaatttatgtgacaacttcttttttctctcttttcat |
24551182 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 245 - 312
Target Start/End: Original strand, 37302962 - 37303029
Alignment:
| Q |
245 |
tgagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
||||||||||||||||||||| || |||||||||||| ||||| || ||||||||||||||||||||| |
|
|
| T |
37302962 |
tgagtagtgttatttgaacaagcatatgagacaacttttgtgacaatttcttttttctctcttttcat |
37303029 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 241 - 312
Target Start/End: Original strand, 39604130 - 39604201
Alignment:
| Q |
241 |
tttttgagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
||||| ||||||||||||||||||| |||||||| ||||||| ||| |||||||||||||||||||||||| |
|
|
| T |
39604130 |
ttttttagtagtgttatttgaacaactaaatgagataacttatttgacaacttcttttttctctcttttcat |
39604201 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 26280066 - 26280000
Alignment:
| Q |
245 |
tgagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||| || || ||||| |||||||||||| |
|
|
| T |
26280066 |
tgagtagtgttatttgaacaatcaaatgagataacttatgtgacaa-ttttttttcctctcttttcat |
26280000 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 241 - 312
Target Start/End: Complemental strand, 28269993 - 28269922
Alignment:
| Q |
241 |
tttttgagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
||||| ||||||||||||||||||| || |||||||||||| || || |||||||||||||| ||||||||| |
|
|
| T |
28269993 |
ttttttagtagtgttatttgaacaaccatatgagacaacttttgcgacaacttcttttttctatcttttcat |
28269922 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 245 - 312
Target Start/End: Original strand, 42475865 - 42475932
Alignment:
| Q |
245 |
tgagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
||||||||||||||||||||| || || ||||||||| ||||| ||||| |||||||||||||||||| |
|
|
| T |
42475865 |
tgagtagtgttatttgaacaaccatataagacaacttttgtgaaaacttattttttctctcttttcat |
42475932 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 243 - 312
Target Start/End: Complemental strand, 3483304 - 3483235
Alignment:
| Q |
243 |
tttgagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||||||||||||||||||||||||| ||| ||||| | ||||| ||||| |||||||||||||||||| |
|
|
| T |
3483304 |
tttgagtagtgttatttgaacaatcatttgatacaacatctgtgacaactttttttttctctcttttcat |
3483235 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 247 - 312
Target Start/End: Complemental strand, 32536921 - 32536857
Alignment:
| Q |
247 |
agtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||||||||||||||||||| |||||| ||||||||||||| ||||| |||| ||||||||||||| |
|
|
| T |
32536921 |
agtagtgttatttgaacaattaaatgatacaacttatgtgacaactt-ttttctctctcttttcat |
32536857 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 247 - 312
Target Start/End: Complemental strand, 55195527 - 55195463
Alignment:
| Q |
247 |
agtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||| || || ||||| |||||||||||| |
|
|
| T |
55195527 |
agtagtgttatttgaacaatcaaatgagacaatttatgtgacaa-ttttttttcctctcttttcat |
55195463 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 241 - 312
Target Start/End: Complemental strand, 33007548 - 33007476
Alignment:
| Q |
241 |
tttttgagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttctt-ttttctctcttttcat |
312 |
Q |
| |
|
|||| |||||||||||||||||||| || ||||||||| || ||||| |||||||| |||||||||||||||| |
|
|
| T |
33007548 |
ttttcgagtagtgttatttgaacaaccatatgagacaatttttgtgacaacttctttttttctctcttttcat |
33007476 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 254 - 312
Target Start/End: Original strand, 37215128 - 37215186
Alignment:
| Q |
254 |
ttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||||||||||| || |||||||||||| ||||| ||||| |||||||||||||||||| |
|
|
| T |
37215128 |
ttatttgaacaaccatatgagacaacttttgtgacaacttattttttctctcttttcat |
37215186 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 246 - 312
Target Start/End: Complemental strand, 37303565 - 37303499
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||||||||||||||||||| | |||||||||||| ||||| || || |||||||||||||||||| |
|
|
| T |
37303565 |
gagtagtgttatttgaacaactatatgagacaacttttgtgacaatttattttttctctcttttcat |
37303499 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 245 - 309
Target Start/End: Complemental strand, 35272211 - 35272146
Alignment:
| Q |
245 |
tgagtagtgttatttgaacaat-caaatgagacaacttatgtgataacttcttttttctctctttt |
309 |
Q |
| |
|
||||||||| |||||||||||| || | ||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
35272211 |
tgagtagtgatatttgaacaattcattttagacaacttatgtgacaacttcttttttctctctttt |
35272146 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 8066537 - 8066471
Alignment:
| Q |
245 |
tgagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
||||||||||||||| |||||||| ||||||||||| ||||| ||||| ||||||||||||||||| |
|
|
| T |
8066537 |
tgagtagtgttatttaaacaatcatatgagacaactattgtgacaactt-atttttctctcttttcat |
8066471 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 29706086 - 29706019
Alignment:
| Q |
245 |
tgagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
||||||||| ||||||||||| | ||| ||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
29706086 |
tgagtagtgatatttgaacaactatttgatacaacttttgtgacaacttcttttttctctcttttcat |
29706019 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 48649764 - 48649697
Alignment:
| Q |
245 |
tgagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
||||||||||||||||||||| || |||||| || || ||||||||||| |||| ||||| ||||||| |
|
|
| T |
48649764 |
tgagtagtgttatttgaacaaccatatgagataatttttgtgataacttattttctctcttttttcat |
48649697 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 312
Target Start/End: Complemental strand, 39540417 - 39540351
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||| ||||||||||||||| || |||||| || || |||||||| || |||||||||||||||||| |
|
|
| T |
39540417 |
gagttgtgttatttgaacaaccatatgagataatttttgtgataatttattttttctctcttttcat |
39540351 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 255 - 312
Target Start/End: Complemental strand, 11173623 - 11173566
Alignment:
| Q |
255 |
tatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
||||||||||| || ||| ||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
11173623 |
tatttgaacaaccatttgatacaacttttgtgacaacttcttttttctctcttttcat |
11173566 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 247 - 312
Target Start/End: Complemental strand, 30839638 - 30839573
Alignment:
| Q |
247 |
agtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
||||||| ||||| |||||||| |||| |||||| ||||| ||||||| |||||||||||||||| |
|
|
| T |
30839638 |
agtagtgatatttaaacaatcatatgatacaactcttgtgacaacttctattttctctcttttcat |
30839573 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 312
Target Start/End: Complemental strand, 5350485 - 5350418
Alignment:
| Q |
247 |
agtagtgttatttgaacaatcaaatg--agacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
||||||| ||||||||||| || ||| ||||||||||||| ||||||| |||| ||||||||||||| |
|
|
| T |
5350485 |
agtagtgatatttgaacaaccatatgtgagacaacttatgtaataacttattttatctctcttttcat |
5350418 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 245 - 312
Target Start/End: Original strand, 28300534 - 28300601
Alignment:
| Q |
245 |
tgagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
||||||||| ||||||||||| || |||| |||||| ||||| ||||| | |||||||||||||||| |
|
|
| T |
28300534 |
tgagtagtgatatttgaacaaccatatgatacaactcttgtgacaacttttattttctctcttttcat |
28300601 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 32 - 71
Target Start/End: Complemental strand, 52128944 - 52128905
Alignment:
| Q |
32 |
gatcttcctcaagctccatttatgctctgaaatcaacaac |
71 |
Q |
| |
|
||||||||||||||||||| |||| ||||||||||||||| |
|
|
| T |
52128944 |
gatcttcctcaagctccatctatgttctgaaatcaacaac |
52128905 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 32 - 71
Target Start/End: Complemental strand, 52129313 - 52129274
Alignment:
| Q |
32 |
gatcttcctcaagctccatttatgctctgaaatcaacaac |
71 |
Q |
| |
|
||||||||||||||||||| |||| ||||||||||||||| |
|
|
| T |
52129313 |
gatcttcctcaagctccatctatgttctgaaatcaacaac |
52129274 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 312
Target Start/End: Original strand, 7231895 - 7231961
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||||||| ||||||||||| || ||| ||||||| ||||| || || |||||||||||||||||| |
|
|
| T |
7231895 |
gagtagtgatatttgaacaaccatttgatacaacttttgtgacaatttattttttctctcttttcat |
7231961 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 312
Target Start/End: Original strand, 20380778 - 20380844
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||||||| ||||||||||| || | | ||||||| ||||| ||||||||||||||| |||||||| |
|
|
| T |
20380778 |
gagtagtgatatttgaacaaccattttaaacaacttttgtgacaacttcttttttctcacttttcat |
20380844 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 312
Target Start/End: Complemental strand, 46473310 - 46473244
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
||||| || ||||||||||| || ||| ||||||| | ||| |||||||||||||||||||||||| |
|
|
| T |
46473310 |
gagtaatgatatttgaacaaccatttgatacaacttttatgacaacttcttttttctctcttttcat |
46473244 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 309
Target Start/End: Complemental strand, 47723284 - 47723230
Alignment:
| Q |
255 |
tatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctctttt |
309 |
Q |
| |
|
|||||||||||||| |||| |||||| ||||||||||||| |||||||| |||| |
|
|
| T |
47723284 |
tatttgaacaatcatatgatacaactcttgtgataacttctattttctctttttt |
47723230 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 312
Target Start/End: Complemental strand, 5188389 - 5188352
Alignment:
| Q |
275 |
acaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
5188389 |
acaacttttgtgacaacttcttttttctctcttttcat |
5188352 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 283
Target Start/End: Original strand, 9099468 - 9099505
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttat |
283 |
Q |
| |
|
|||||||||||||||||||| || |||||||||||||| |
|
|
| T |
9099468 |
gagtagtgttatttgaacaaccatatgagacaacttat |
9099505 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 281
Target Start/End: Complemental strand, 22813243 - 22813206
Alignment:
| Q |
244 |
ttgagtagtgttatttgaacaatcaaatgagacaactt |
281 |
Q |
| |
|
||||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
22813243 |
ttgagtagtgttattcgaacaaccaaatgagacaactt |
22813206 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 312
Target Start/End: Complemental strand, 41957698 - 41957629
Alignment:
| Q |
243 |
tttgagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
||||||||||| ||||| ||||| || | | ||||||| |||||||| |||||||||||| |||||||| |
|
|
| T |
41957698 |
tttgagtagtgatatttaaacaaccattttaaacaacttttgtgataatttcttttttctcacttttcat |
41957629 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 312
Target Start/End: Complemental strand, 48946020 - 48945963
Alignment:
| Q |
255 |
tatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||||||||||||| ||| |||| |||| ||||||||||||||||||| ||||||| |
|
|
| T |
48946020 |
tatttgaacaatcatttgaaacaatttatatgataacttcttttttctcaattttcat |
48945963 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 309
Target Start/End: Complemental strand, 31997985 - 31997921
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatg-tgataacttcttttttctctctttt |
309 |
Q |
| |
|
|||||||| ||||||||||| || ||||||||||| || ||| |||||||||| |||||||||| |
|
|
| T |
31997985 |
gagtagtgatatttgaacaaccatttgagacaacttttgatgacaacttcttttctctctctttt |
31997921 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 312
Target Start/End: Original strand, 32687887 - 32687915
Alignment:
| Q |
284 |
gtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
32687887 |
gtgataacttcttttttctctcttttcat |
32687915 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 312
Target Start/End: Original strand, 41877498 - 41877566
Alignment:
| Q |
246 |
gagtagtgttatttgaacaat-caaatgagacaacttatgtgataacttcttttt-tctctcttttcat |
312 |
Q |
| |
|
|||||||| |||||||||||| || | ||||||||||||||| || |||||||| ||||||||||||| |
|
|
| T |
41877498 |
gagtagtggtatttgaacaattcattttagacaacttatgtgacaatttctttttctctctcttttcat |
41877566 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 59; Significance: 7e-25; HSPs: 25)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 242 - 312
Target Start/End: Complemental strand, 1889333 - 1889263
Alignment:
| Q |
242 |
ttttgagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |
|
|
| T |
1889333 |
ttttgagtaatgttatttgaacaatcaaatgagacaatttatgtgacaacttcttttttctctcttttcat |
1889263 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 246 - 312
Target Start/End: Complemental strand, 23045343 - 23045277
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||| |
|
|
| T |
23045343 |
gagtagtgttatttgaacaaccaaatgagacaacttatgtgacaacttcttttttctctattttcat |
23045277 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 18917807 - 18917740
Alignment:
| Q |
245 |
tgagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||| |
|
|
| T |
18917807 |
tgagtagtgttatttgaacaacaaaatgagacaatttatgtgacaacttcttttttctctcttttcat |
18917740 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 249 - 312
Target Start/End: Original strand, 6639364 - 6639427
Alignment:
| Q |
249 |
tagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
||||||||||||||||| ||||||||| ||||||||||| |||||||||| ||||||||||||| |
|
|
| T |
6639364 |
tagtgttatttgaacaaccaaatgagataacttatgtgacaacttcttttctctctcttttcat |
6639427 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 245 - 312
Target Start/End: Original strand, 19695580 - 19695646
Alignment:
| Q |
245 |
tgagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||| |
|
|
| T |
19695580 |
tgagtagtgttatttgaacaaccaaatgagacaacttatgtgacaactt-tttttcctctcttttcat |
19695646 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 246 - 312
Target Start/End: Complemental strand, 13104661 - 13104595
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||||||||||||||||||| || ||||||||| || ||||| ||||| |||||||||||||||||| |
|
|
| T |
13104661 |
gagtagtgttatttgaacaaccatatgagacaatttttgtgacaacttattttttctctcttttcat |
13104595 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 246 - 312
Target Start/End: Complemental strand, 32750180 - 32750114
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||||||||||||||||||| || ||||||||| || ||||| ||||| |||||||||||||||||| |
|
|
| T |
32750180 |
gagtagtgttatttgaacaaccatatgagacaatttttgtgacaacttattttttctctcttttcat |
32750114 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 246 - 312
Target Start/End: Complemental strand, 3091923 - 3091857
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||||||| |||||||||||| | ||| ||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
3091923 |
gagtagtgatatttgaacaattatttgatacaacttttgtgacaacttcttttttctctcttttcat |
3091857 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 246 - 312
Target Start/End: Original strand, 7086013 - 7086079
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||||||||||||||||||| || ||||||||| || ||||| ||||| |||| ||||||||||||| |
|
|
| T |
7086013 |
gagtagtgttatttgaacaaccatatgagacaatttttgtgacaacttattttctctctcttttcat |
7086079 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 246 - 304
Target Start/End: Original strand, 15901894 - 15901952
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctct |
304 |
Q |
| |
|
||||||||||||||||||||||| |||||| ||||| ||||| ||||| |||||||||| |
|
|
| T |
15901894 |
gagtagtgttatttgaacaatcatatgagataacttttgtgacaacttattttttctct |
15901952 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 246 - 312
Target Start/End: Original strand, 31296732 - 31296798
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||||||| |||||||| || || ||| |||||||||||||| || ||||||||||||||||||||| |
|
|
| T |
31296732 |
gagtagtgatatttgaataaccatatgggacaacttatgtgacaatttcttttttctctcttttcat |
31296798 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 246 - 312
Target Start/End: Original strand, 42251809 - 42251875
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||||||| ||||| |||||||| || ||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
42251809 |
gagtagtgatatttaaacaatcatttggaacaacttatgtgacaacttcttttttctctcttttcat |
42251875 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 307
Target Start/End: Original strand, 1876241 - 1876302
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctctt |
307 |
Q |
| |
|
|||||||||||||| ||||| || |||||||||||| ||||| |||||||||||||| |||| |
|
|
| T |
1876241 |
gagtagtgttatttcaacaaccatatgagacaacttttgtgacaacttcttttttctatctt |
1876302 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 312
Target Start/End: Complemental strand, 23880280 - 23880211
Alignment:
| Q |
243 |
tttgagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||||||| |||||||||||||| || |||||||||||| | ||| || || |||||||||||||||||| |
|
|
| T |
23880280 |
tttgagtaatgttatttgaacaaccatatgagacaacttttatgacaatttattttttctctcttttcat |
23880211 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 246 - 312
Target Start/End: Complemental strand, 34249763 - 34249696
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataactt-cttttttctctcttttcat |
312 |
Q |
| |
|
|||||||||||||||||||| || ||||||||| || ||||| ||||| |||||||||||||||||| |
|
|
| T |
34249763 |
gagtagtgttatttgaacaaccatatgagacaatttttgtgacaacttatttttttctctcttttcat |
34249696 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 312
Target Start/End: Original strand, 25801704 - 25801766
Alignment:
| Q |
250 |
agtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||| ||||||||||| | ||||||||||| |||||| ||||||||||||||||||||||| |
|
|
| T |
25801704 |
agtgatatttgaacaacaatttgagacaacttttgtgatcacttcttttttctctcttttcat |
25801766 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 312
Target Start/End: Complemental strand, 14714170 - 14714102
Alignment:
| Q |
244 |
ttgagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||||||||| |||||||||| || |||||||| || ||||| |||||||||| ||||||||||||| |
|
|
| T |
14714170 |
ttgagtagtgatatttgaacatccatttgagacaatttttgtgacaacttcttttctctctcttttcat |
14714102 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 245 - 312
Target Start/End: Original strand, 14140227 - 14140294
Alignment:
| Q |
245 |
tgagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
||||||||| |||||||||||||| | | | ||||| ||||| || ||||||||||||||||||||| |
|
|
| T |
14140227 |
tgagtagtgatatttgaacaatcatttaaaataacttttgtgacaatttcttttttctctcttttcat |
14140294 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 245 - 312
Target Start/End: Original strand, 23344877 - 23344944
Alignment:
| Q |
245 |
tgagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
||||||||| |||||||||| ||| |||||||||| | ||| |||||||||| ||||||||||||| |
|
|
| T |
23344877 |
tgagtagtgatatttgaacattcatttgagacaactcttctgacaacttcttttctctctcttttcat |
23344944 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 246 - 309
Target Start/End: Original strand, 43650436 - 43650499
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctctttt |
309 |
Q |
| |
|
||||| || ||||| |||||||| ||| ||||||||||||| || |||||||||||||||||| |
|
|
| T |
43650436 |
gagtaatgatatttaaacaatcatttgatacaacttatgtgacaatttcttttttctctctttt |
43650499 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 246 - 309
Target Start/End: Complemental strand, 43665804 - 43665742
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctctttt |
309 |
Q |
| |
|
|||||||||||||||||||| |||| ||||||| |||||||| || || ||||| ||||||||| |
|
|
| T |
43665804 |
gagtagtgttatttgaacaaccaaacgagacaatttatgtgacaa-ttttttttcctctctttt |
43665742 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 312
Target Start/End: Original strand, 11164265 - 11164331
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||| ||| ||||||||||| | ||| ||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
11164265 |
gagtggtgatatttgaacaactatttgatacaacttttgtgacaacttcttttttctctcttttcat |
11164331 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 312
Target Start/End: Complemental strand, 36133156 - 36133090
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||||||| ||||||||||| | | | ||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
36133156 |
gagtagtgatatttgaacaactatttcatacaacttttgtgacaacttcttttttctctcttttcat |
36133090 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 312
Target Start/End: Complemental strand, 12600201 - 12600164
Alignment:
| Q |
275 |
acaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
12600201 |
acaacttttgtgacaacttcttttttctctcttttcat |
12600164 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 312
Target Start/End: Complemental strand, 13711214 - 13711177
Alignment:
| Q |
275 |
acaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
13711214 |
acaacttttgtgacaacttcttttttctctcttttcat |
13711177 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 56; Significance: 4e-23; HSPs: 29)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 35580293 - 35580226
Alignment:
| Q |
245 |
tgagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||| |
|
|
| T |
35580293 |
tgagtagtgttatttgaacaatcaaatgagacaacttatgtgacaacttttttttcctctcttttcat |
35580226 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 241 - 312
Target Start/End: Original strand, 24337240 - 24337311
Alignment:
| Q |
241 |
tttttgagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||| || |||||||| | |||||||||||||||||||||| |
|
|
| T |
24337240 |
tttttgagtagtgttatttgaacaaccaaatgagataatttatgtgacagcttcttttttctctcttttcat |
24337311 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 246 - 312
Target Start/End: Original strand, 51717173 - 51717239
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||||||| |||||||||||||| |||||||||||||||||| || ||||||||||||||||||||| |
|
|
| T |
51717173 |
gagtagtgatatttgaacaatcatatgagacaacttatgtgacaatttcttttttctctcttttcat |
51717239 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 246 - 312
Target Start/End: Original strand, 25523085 - 25523151
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||||||||||||||||||| || |||||||||||| ||||||||||| |||| ||||||||||||| |
|
|
| T |
25523085 |
gagtagtgttatttgaacaaccatatgagacaacttttgtgataacttattttctctctcttttcat |
25523151 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 247 - 309
Target Start/End: Original strand, 5123480 - 5123542
Alignment:
| Q |
247 |
agtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctctttt |
309 |
Q |
| |
|
||||||||||||||||||| || |||||||||||| ||||| ||||| ||||||||||||||| |
|
|
| T |
5123480 |
agtagtgttatttgaacaaccatatgagacaacttttgtgacaacttattttttctctctttt |
5123542 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 244 - 312
Target Start/End: Original strand, 38844377 - 38844445
Alignment:
| Q |
244 |
ttgagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
||||||| |||||||||||||| || |||||||||||| ||||| ||||| |||| ||||||||||||| |
|
|
| T |
38844377 |
ttgagtaatgttatttgaacaaccatatgagacaacttttgtgacaacttattttctctctcttttcat |
38844445 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 246 - 309
Target Start/End: Original strand, 37726945 - 37727006
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctctttt |
309 |
Q |
| |
|
|||||||||||||||||||| |||| ||||||||||| ||||||||| ||||| ||||||||| |
|
|
| T |
37726945 |
gagtagtgttatttgaacaaccaaacgagacaacttaagtgataact--tttttcctctctttt |
37727006 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 241 - 312
Target Start/End: Original strand, 28480422 - 28480493
Alignment:
| Q |
241 |
tttttgagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
||||||||||||| ||||||||||| | |||||||||| ||||| |||||||||| ||||||||||||| |
|
|
| T |
28480422 |
tttttgagtagtgatatttgaacaactatttgagacaactattgtgacaacttcttttctctctcttttcat |
28480493 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 254 - 312
Target Start/End: Original strand, 52891748 - 52891809
Alignment:
| Q |
254 |
ttatttgaacaatcaaatgagacaacttatgtgataacttcttttt---tctctcttttcat |
312 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||| ||||| ||||| ||||||||||||| |
|
|
| T |
52891748 |
ttatttgaacaatcaaatgagataacttatgtgacaacttttttttttctctctcttttcat |
52891809 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 312
Target Start/End: Complemental strand, 31275328 - 31275262
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||||||| ||||||||||| || ||| ||||||| ||||| || ||||||||||||||||||||| |
|
|
| T |
31275328 |
gagtagtgatatttgaacaaccatttgatacaacttttgtgacaatttcttttttctctcttttcat |
31275262 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 312
Target Start/End: Complemental strand, 37547217 - 37547151
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
||||||| |||||||||||| | |||||||| |||||||||||||||||||||||| ||||||| |
|
|
| T |
37547217 |
gagtagtaatatttgaacaattatctgagacaatttatgtgataacttcttttttctcatttttcat |
37547151 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 312
Target Start/End: Original strand, 42915108 - 42915174
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||||||| ||||||||||| | ||| ||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
42915108 |
gagtagtgatatttgaacaactatttgatacaacttttgtgacaacttcttttttctctcttttcat |
42915174 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 312
Target Start/End: Complemental strand, 47998775 - 47998710
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||||||| |||||||||||||| ||| ||||||| ||||||||||| |||||||| ||||||||| |
|
|
| T |
47998775 |
gagtagtgatatttgaacaatcatttgatacaacttttgtgataactt-ttttttctttcttttcat |
47998710 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 312
Target Start/End: Complemental strand, 51389494 - 51389432
Alignment:
| Q |
250 |
agtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||| ||||||||||| || ||| ||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
51389494 |
agtgatatttgaacaaccatttgatacaacttttgtgacaacttcttttttctctcttttcat |
51389432 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 300
Target Start/End: Original strand, 54251349 - 54251403
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttctttttt |
300 |
Q |
| |
|
|||||||||||||||||||| ||||||| |||||||||||| ||||| |||||| |
|
|
| T |
54251349 |
gagtagtgttatttgaacaactaaatgagtcaacttatgtgacaacttttttttt |
54251403 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 247 - 312
Target Start/End: Original strand, 29384087 - 29384152
Alignment:
| Q |
247 |
agtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
||||||| |||||||||||||| |||| |||||| ||||| ||||||| |||||||| ||||||| |
|
|
| T |
29384087 |
agtagtgatatttgaacaatcatatgatacaactcttgtgacaacttctattttctcttttttcat |
29384152 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 245 - 290
Target Start/End: Original strand, 35198862 - 35198907
Alignment:
| Q |
245 |
tgagtagtgttatttgaacaatcaaatgagacaacttatgtgataa |
290 |
Q |
| |
|
|||||||| ||||||||||| | ||||||||||||||||||||||| |
|
|
| T |
35198862 |
tgagtagtattatttgaacagttaaatgagacaacttatgtgataa |
35198907 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 246 - 287
Target Start/End: Complemental strand, 39684807 - 39684766
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtga |
287 |
Q |
| |
|
||||||| |||||||||||| ||||||||||||||||||||| |
|
|
| T |
39684807 |
gagtagtattatttgaacaaccaaatgagacaacttatgtga |
39684766 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 312
Target Start/End: Original strand, 38160660 - 38160728
Alignment:
| Q |
245 |
tgagtagtgttatttgaacaa-tcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
||||||||| ||||||||||| ||| | ||||||||||||||| ||||| |||||||||| ||||||| |
|
|
| T |
38160660 |
tgagtagtgatatttgaacaactcattttagacaacttatgtgacaacttattttttctcttttttcat |
38160728 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 281
Target Start/End: Original strand, 46794403 - 46794439
Alignment:
| Q |
245 |
tgagtagtgttatttgaacaatcaaatgagacaactt |
281 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
46794403 |
tgagtagtgttatttgaacaaccaaatgagacaactt |
46794439 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 309
Target Start/End: Original strand, 53583016 - 53583080
Alignment:
| Q |
245 |
tgagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctctttt |
309 |
Q |
| |
|
|||||| |||||||||||||| || |||||||||||| ||||| ||||| |||| ||||| |||| |
|
|
| T |
53583016 |
tgagtactgttatttgaacaaccatatgagacaacttttgtgacaacttattttctctctatttt |
53583080 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 246 - 309
Target Start/End: Original strand, 10994042 - 10994105
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctctttt |
309 |
Q |
| |
|
|||||||| |||||||||||||| | |||||| ||||| || |||||||||| |||||||||| |
|
|
| T |
10994042 |
gagtagtgatatttgaacaatcattttagacaatttatgcgacaacttcttttctctctctttt |
10994105 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 245 - 312
Target Start/End: Original strand, 28481300 - 28481367
Alignment:
| Q |
245 |
tgagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
||||||||| ||||||||||| | |||||||||| ||||| |||||||||| ||||||||||||| |
|
|
| T |
28481300 |
tgagtagtgatatttgaacaactatttgagacaactattgtgacaacttcttttctctctcttttcat |
28481367 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 245 - 312
Target Start/End: Original strand, 28482175 - 28482242
Alignment:
| Q |
245 |
tgagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
||||||||| ||||||||||| | |||||||||| ||||| |||||||||| ||||||||||||| |
|
|
| T |
28482175 |
tgagtagtgatatttgaacaactatttgagacaactattgtgacaacttcttttctctctcttttcat |
28482242 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 246 - 281
Target Start/End: Original strand, 41119427 - 41119462
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaactt |
281 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||| |
|
|
| T |
41119427 |
gagtagtgttatttgaacaaccaaatgagacaactt |
41119462 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 312
Target Start/End: Original strand, 34116429 - 34116495
Alignment:
| Q |
247 |
agtagtgttatttgaacaa-tcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
||||||| ||||||||||| ||| | |||||| |||||||| ||||| |||||||||||||||||| |
|
|
| T |
34116429 |
agtagtgatatttgaacaactcattttagacaatttatgtgacaactttttttttctctcttttcat |
34116495 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 312
Target Start/End: Original strand, 36444284 - 36444350
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||||||| |||||||||||||| |||| |||| | ||||| ||||||| |||||||| ||||||| |
|
|
| T |
36444284 |
gagtagtgatatttgaacaatcatatgatacaattcttgtgacaacttctattttctcttttttcat |
36444350 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 309
Target Start/End: Original strand, 5234359 - 5234423
Alignment:
| Q |
245 |
tgagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctctttt |
309 |
Q |
| |
|
||||||||| ||||||||||| || ||| ||||||| ||||| || || ||||||||||||||| |
|
|
| T |
5234359 |
tgagtagtgatatttgaacaaccatttgatacaacttttgtgacaattttttttttctctctttt |
5234423 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 244 - 312
Target Start/End: Complemental strand, 15596580 - 15596512
Alignment:
| Q |
244 |
ttgagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||||||||| ||||||||||| || | | ||||||| ||||| ||||||||||||||| ||||||| |
|
|
| T |
15596580 |
ttgagtagtgatatttgaacaaccattttaaacaacttttgtgacaacttcttttttctcatttttcat |
15596512 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 55; Significance: 2e-22; HSPs: 19)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 246 - 312
Target Start/End: Original strand, 19376021 - 19376087
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
19376021 |
gagtagtgttatttgaacaactaaatgagacaacttatgtgacaacttcttttttctctcttttcat |
19376087 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 246 - 312
Target Start/End: Original strand, 27392591 - 27392657
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||||||||||||||||||| || |||||||||||| ||||| ||||| |||||| ||||||||||| |
|
|
| T |
27392591 |
gagtagtgttatttgaacaaccatatgagacaacttttgtgacaacttattttttttctcttttcat |
27392657 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 312
Target Start/End: Complemental strand, 39595459 - 39595390
Alignment:
| Q |
243 |
tttgagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||||||| || ||||||||||| || ||| ||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
39595459 |
tttgagtaatgatatttgaacaaccatttgatacaacttttgtgacaacttcttttttctctcttttcat |
39595390 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 241 - 312
Target Start/End: Complemental strand, 125279 - 125208
Alignment:
| Q |
241 |
tttttgagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
||||| ||||||| ||||||||||| || ||| ||||||| || || |||||||||||||||||||||||| |
|
|
| T |
125279 |
ttttttagtagtgatatttgaacaaccatttgatacaacttttgcgacaacttcttttttctctcttttcat |
125208 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 11666362 - 11666295
Alignment:
| Q |
245 |
tgagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
||||||| |||||||||| || || |||||| ||||| ||| | |||||||||||||||||||||||| |
|
|
| T |
11666362 |
tgagtagcgttatttgaaaaaccatatgagataacttttgtaacaacttcttttttctctcttttcat |
11666295 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 245 - 312
Target Start/End: Original strand, 24431506 - 24431573
Alignment:
| Q |
245 |
tgagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
||||||||| ||||||||||| || |||||||||| ||||| |||||| ||||||||||||||||| |
|
|
| T |
24431506 |
tgagtagtgatatttgaacaaccatttgagacaactattgtgacaacttcatttttctctcttttcat |
24431573 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 312
Target Start/End: Original strand, 20719904 - 20719970
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||||||| |||||||||| || ||||||||||| ||||| |||||||||| ||||||||||||| |
|
|
| T |
20719904 |
gagtagtgatatttgaacatccatttgagacaacttttgtgacaacttcttttctctctcttttcat |
20719970 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 309
Target Start/End: Complemental strand, 29402353 - 29402301
Alignment:
| Q |
257 |
tttgaacaatcaaatgagacaacttatgtgataacttcttttttctctctttt |
309 |
Q |
| |
|
||||||||| || ||||||||||||||||| |||||||||||||| |||||| |
|
|
| T |
29402353 |
tttgaacaaccatgtgagacaacttatgtgacaacttcttttttctttctttt |
29402301 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 246 - 281
Target Start/End: Complemental strand, 471984 - 471949
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaactt |
281 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||| |
|
|
| T |
471984 |
gagtagtgttatttgaacaatcatatgagacaactt |
471949 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 246 - 293
Target Start/End: Complemental strand, 33393741 - 33393694
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataactt |
293 |
Q |
| |
|
|||||||||||||||||||| || |||||||||||| | ||||||||| |
|
|
| T |
33393741 |
gagtagtgttatttgaacaaccatatgagacaacttttatgataactt |
33393694 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 246 - 312
Target Start/End: Original strand, 33909976 - 33910043
Alignment:
| Q |
246 |
gagtagtgttatttgaacaa-tcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||||||| ||||||||||| | | || |||||| |||||||| |||||||||| ||||||||||||| |
|
|
| T |
33909976 |
gagtagtgatatttgaacaacttatattagacaatttatgtgacaacttcttttctctctcttttcat |
33910043 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 312
Target Start/End: Original strand, 2117529 - 2117595
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||||||| ||||||||||| | ||| ||||||| ||||| |||||||||||||||| ||||||| |
|
|
| T |
2117529 |
gagtagtgatatttgaacaactatttgatacaacttttgtgacaacttcttttttctcttttttcat |
2117595 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 312
Target Start/End: Complemental strand, 11306878 - 11306812
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||||||| ||||||||||| | ||| ||||||| || || |||||||||||||||||||||||| |
|
|
| T |
11306878 |
gagtagtgatatttgaacaactatttgatacaacttttgagacaacttcttttttctctcttttcat |
11306812 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 308
Target Start/End: Complemental strand, 16202906 - 16202840
Alignment:
| Q |
243 |
tttgagtagtgttatttgaacaatcaaatgagacaacttat-gtgataacttcttttttctctcttt |
308 |
Q |
| |
|
||||||||||| |||||||||||||| | | ||||||| | |||| |||||||||||||||||||| |
|
|
| T |
16202906 |
tttgagtagtgatatttgaacaatcatttcatacaacttttagtgacaacttcttttttctctcttt |
16202840 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 312
Target Start/End: Original strand, 33567128 - 33567194
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||||||| ||| ||||||| || ||| ||||||| ||||| || ||||||||||||||||||||| |
|
|
| T |
33567128 |
gagtagtgatatatgaacaaccatttgatacaacttttgtgacaatttcttttttctctcttttcat |
33567194 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 312
Target Start/End: Original strand, 4834943 - 4834984
Alignment:
| Q |
271 |
tgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||||||||| |||||||||||||||| ||||||||||||| |
|
|
| T |
4834943 |
tgagacaactcttgtgataacttcttttctctctcttttcat |
4834984 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 278
Target Start/End: Complemental strand, 6529193 - 6529160
Alignment:
| Q |
245 |
tgagtagtgttatttgaacaatcaaatgagacaa |
278 |
Q |
| |
|
||||||||||||||||||||| |||||||||||| |
|
|
| T |
6529193 |
tgagtagtgttatttgaacaaccaaatgagacaa |
6529160 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 281
Target Start/End: Complemental strand, 42909891 - 42909854
Alignment:
| Q |
244 |
ttgagtagtgttatttgaacaatcaaatgagacaactt |
281 |
Q |
| |
|
|||||||||||||||||||||| || |||||||||||| |
|
|
| T |
42909891 |
ttgagtagtgttatttgaacaaccatatgagacaactt |
42909854 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 309
Target Start/End: Original strand, 9714023 - 9714087
Alignment:
| Q |
245 |
tgagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctctttt |
309 |
Q |
| |
|
||||||||| ||||||||||| || |||| |||||| ||||| ||||||| |||||| |||||| |
|
|
| T |
9714023 |
tgagtagtgatatttgaacaaccatatgatacaactcttgtgacaacttctattttctatctttt |
9714087 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 49; Significance: 6e-19; HSPs: 17)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 244 - 312
Target Start/End: Complemental strand, 28824687 - 28824619
Alignment:
| Q |
244 |
ttgagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||| ||||| | ||| |||||||||||| |
|
|
| T |
28824687 |
ttgagtagtgttatttgaacaaccaaatgagacaacttatgtgacaacttttgtttcctctcttttcat |
28824619 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 26153843 - 26153776
Alignment:
| Q |
245 |
tgagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
||||||||| ||||||||||| || |||||||||||||||||| ||||||| ||||||||||||||| |
|
|
| T |
26153843 |
tgagtagtgatatttgaacaaacatatgagacaacttatgtgacaacttctcatttctctcttttcat |
26153776 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 246 - 312
Target Start/End: Original strand, 19510246 - 19510312
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
||||||||||||||||||||||| || ||||||||| ||| | ||||| |||||||||||||||||| |
|
|
| T |
19510246 |
gagtagtgttatttgaacaatcatataagacaacttttgtaacaacttattttttctctcttttcat |
19510312 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 243 - 312
Target Start/End: Complemental strand, 2790363 - 2790293
Alignment:
| Q |
243 |
tttgagtagtgttatttgaacaa-tcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
||||||||||| ||||||||||| ||| | ||||||||||||||| |||||||||| ||||||||||||| |
|
|
| T |
2790363 |
tttgagtagtgatatttgaacaactcattttagacaacttatgtgacaacttcttttctctctcttttcat |
2790293 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 10591338 - 10591272
Alignment:
| Q |
242 |
ttttgagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttt |
308 |
Q |
| |
|
|||||||||||| ||||||||||| || ||||||||||| ||||| ||||||||||||||| |||| |
|
|
| T |
10591338 |
ttttgagtagtgatatttgaacaaccatttgagacaacttttgtgacaacttcttttttctcacttt |
10591272 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 246 - 312
Target Start/End: Complemental strand, 33684862 - 33684796
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||||||||||||||||||| | |||| ||||||| ||||| |||||||||||||| ||||||||| |
|
|
| T |
33684862 |
gagtagtgttatttgaacaactatatgaaacaacttttgtgacaacttcttttttctatcttttcat |
33684796 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 312
Target Start/End: Original strand, 5198646 - 5198715
Alignment:
| Q |
244 |
ttgagtagtgttatttgaacaa-tcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
||||| |||| ||||||||||| ||| | |||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
5198646 |
ttgagcagtgatatttgaacaactcattttagacaacttatgtgataatttcttttttctctcttttcat |
5198715 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 21752841 - 21752774
Alignment:
| Q |
245 |
tgagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
||||||||||||||||||||| | |||| ||||||| ||||| || || |||||||||||||||||| |
|
|
| T |
21752841 |
tgagtagtgttatttgaacaacaatatgaaacaacttttgtgacaatttattttttctctcttttcat |
21752774 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 312
Target Start/End: Complemental strand, 5978761 - 5978695
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||||||| ||||||||||| || |||| |||||| ||||| ||||||| |||||||||||||||| |
|
|
| T |
5978761 |
gagtagtgatatttgaacaaccatatgatacaactcttgtgacaacttctattttctctcttttcat |
5978695 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 241 - 309
Target Start/End: Complemental strand, 45432131 - 45432062
Alignment:
| Q |
241 |
tttttgagtagtgttatttgaacaa-tcaaatgagacaacttatgtgataacttcttttttctctctttt |
309 |
Q |
| |
|
||||| ||||||| ||||||||||| ||| | ||||||||||||||| |||||||||||||||| |||| |
|
|
| T |
45432131 |
ttttttagtagtgatatttgaacaactcattttagacaacttatgtgacaacttcttttttctctttttt |
45432062 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 12142067 - 12142000
Alignment:
| Q |
245 |
tgagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
||||||||| ||||||||||| || ||| ||||||| ||||| ||||| |||||||| ||||||||| |
|
|
| T |
12142067 |
tgagtagtgatatttgaacaaccatttgatacaacttttgtgacaactttttttttctttcttttcat |
12142000 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 245 - 312
Target Start/End: Complemental strand, 21858930 - 21858863
Alignment:
| Q |
245 |
tgagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
||||||||| ||||||||||| || | | ||||||| |||||||||||||||||| || |||||||| |
|
|
| T |
21858930 |
tgagtagtgatatttgaacaaccattttaaacaacttttgtgataacttcttttttttcacttttcat |
21858863 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 32 - 71
Target Start/End: Complemental strand, 24761509 - 24761470
Alignment:
| Q |
32 |
gatcttcctcaagctccatttatgctctgaaatcaacaac |
71 |
Q |
| |
|
||||||||||||||||||| |||| ||||||||||||||| |
|
|
| T |
24761509 |
gatcttcctcaagctccatctatgttctgaaatcaacaac |
24761470 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 32 - 71
Target Start/End: Complemental strand, 24761878 - 24761839
Alignment:
| Q |
32 |
gatcttcctcaagctccatttatgctctgaaatcaacaac |
71 |
Q |
| |
|
||||||||||||||||||| |||| ||||||||||||||| |
|
|
| T |
24761878 |
gatcttcctcaagctccatctatgttctgaaatcaacaac |
24761839 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 246 - 309
Target Start/End: Original strand, 37351879 - 37351942
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctctttt |
309 |
Q |
| |
|
|||||||| |||||||||||||| ||| | ||||| ||||| || |||||||||||||||||| |
|
|
| T |
37351879 |
gagtagtgatatttgaacaatcatttgatataacttttgtgacaatttcttttttctctctttt |
37351942 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 312
Target Start/End: Original strand, 38995912 - 38995978
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
||||| || |||||||||||||| ||| ||||||||||||| || ||||||||| ||| ||||||| |
|
|
| T |
38995912 |
gagtattgatatttgaacaatcatatgtaacaacttatgtgacaatttcttttttttcttttttcat |
38995978 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 312
Target Start/End: Complemental strand, 46651854 - 46651788
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||||||| ||||||||||| || |||| |||| | ||||| ||||||| |||||||||||||||| |
|
|
| T |
46651854 |
gagtagtgatatttgaacaaccatatgatacaattcttgtgacaacttctattttctctcttttcat |
46651788 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 47; Significance: 1e-17; HSPs: 18)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 246 - 312
Target Start/End: Complemental strand, 366839 - 366773
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
||||| |||||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||| |
|
|
| T |
366839 |
gagtaatgttatttgaacaaccaaatgagacaacttatgtgacaacttttttttcctctcttttcat |
366773 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 246 - 312
Target Start/End: Complemental strand, 39010996 - 39010930
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||||||||||||||||||| || |||||||||||| ||||| ||||| |||||||||||||||||| |
|
|
| T |
39010996 |
gagtagtgttatttgaacaaccatatgagacaacttttgtgacaacttattttttctctcttttcat |
39010930 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 246 - 312
Target Start/End: Original strand, 50659081 - 50659147
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||||||||||||||||||| || |||| ||||||||||||| |||||||||| ||||||||||||| |
|
|
| T |
50659081 |
gagtagtgttatttgaacaaccatatgaaacaacttatgtgacaacttcttttctctctcttttcat |
50659147 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 249 - 312
Target Start/End: Complemental strand, 45042439 - 45042377
Alignment:
| Q |
249 |
tagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||| | |||||| ||||||||||| |
|
|
| T |
45042439 |
tagtgttatttgaacaaccaaatgagacaacttatgtgataacct-ttttttttctcttttcat |
45042377 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 244 - 312
Target Start/End: Original strand, 36690459 - 36690527
Alignment:
| Q |
244 |
ttgagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||||||||||||||||||||| || |||||||||||| ||||| ||||| |||| ||||| ||||||| |
|
|
| T |
36690459 |
ttgagtagtgttatttgaacaaccatatgagacaacttttgtgacaacttattttctctctattttcat |
36690527 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 244 - 312
Target Start/End: Original strand, 36706560 - 36706628
Alignment:
| Q |
244 |
ttgagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||||||||||||||||||||| || |||||||||||| ||||| ||||| |||| ||||| ||||||| |
|
|
| T |
36706560 |
ttgagtagtgttatttgaacaaccatatgagacaacttttgtgacaacttattttctctctattttcat |
36706628 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 246 - 312
Target Start/End: Complemental strand, 28253197 - 28253131
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||| ||||||||||||||| || |||||||||||| ||| | |||||||||| ||||||||||||| |
|
|
| T |
28253197 |
gagtggtgttatttgaacaaccatatgagacaacttttgtaacaacttcttttctctctcttttcat |
28253131 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 250 - 312
Target Start/End: Original strand, 47015201 - 47015263
Alignment:
| Q |
250 |
agtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| ||| || || ||||| |||||||||||| |
|
|
| T |
47015201 |
agtgttatttgaacaaccaaatgagacaacttatatgacaatttttttttcctctcttttcat |
47015263 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 248 - 313
Target Start/End: Complemental strand, 1615217 - 1615152
Alignment:
| Q |
248 |
gtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcata |
313 |
Q |
| |
|
|||||||||||||||||| || |||||| ||||| ||||| ||||| | ||||||||||||||||| |
|
|
| T |
1615217 |
gtagtgttatttgaacaaccatatgagataacttttgtgacaacttatattttctctcttttcata |
1615152 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 244 - 312
Target Start/End: Complemental strand, 40610413 - 40610345
Alignment:
| Q |
244 |
ttgagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||||||||| |||||||||| || ||||||||||| ||||| |||||||||| ||||||||||||| |
|
|
| T |
40610413 |
ttgagtagtgatatttgaacatccatttgagacaacttttgtgacaacttcttttctctctcttttcat |
40610345 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 246 - 312
Target Start/End: Complemental strand, 31378664 - 31378597
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttc-tctcttttcat |
312 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||| | ||||| ||||| | ||||||||||| |
|
|
| T |
31378664 |
gagtagtgttatttgaacaactaaatgagacaacttatgtaacaacttttttttccttctcttttcat |
31378597 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 312
Target Start/End: Complemental strand, 34187442 - 34187380
Alignment:
| Q |
250 |
agtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||| ||||||||||| || |||||||| |||||||| ||||||| |||||||||||||||| |
|
|
| T |
34187442 |
agtgatatttgaacaaccatgtgagacaatttatgtgacaacttctcttttctctcttttcat |
34187380 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 305
Target Start/End: Original strand, 50226768 - 50226828
Alignment:
| Q |
246 |
gagtagtgttatttgaacaat-caaatgagacaacttatgtgataacttcttttttctctc |
305 |
Q |
| |
|
|||||||| |||||||||||| || | ||||||||||||||||||||| ||||||||||| |
|
|
| T |
50226768 |
gagtagtgatatttgaacaattcattttagacaacttatgtgataacttattttttctctc |
50226828 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 309
Target Start/End: Original strand, 52233125 - 52233189
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttt-tctctctttt |
309 |
Q |
| |
|
|||||||||||||||||||| || |||||| || || |||| |||||||||||| |||||||||| |
|
|
| T |
52233125 |
gagtagtgttatttgaacaaccatatgagataatttttgtgttaacttctttttctctctctttt |
52233189 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 249 - 312
Target Start/End: Original strand, 50141827 - 50141890
Alignment:
| Q |
249 |
tagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
||||||||||||||||| | |||||||||||| ||||| || || |||| ||||||||||||| |
|
|
| T |
50141827 |
tagtgttatttgaacaactatatgagacaacttttgtgacaatttattttctctctcttttcat |
50141890 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 304
Target Start/End: Complemental strand, 31437000 - 31436942
Alignment:
| Q |
246 |
gagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctct |
304 |
Q |
| |
|
|||||||||||||||||||| || |||||| ||||| ||||| || || |||||||||| |
|
|
| T |
31437000 |
gagtagtgttatttgaacaaccatatgagataacttttgtgacaatttattttttctct |
31436942 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 312
Target Start/End: Original strand, 22389444 - 22389480
Alignment:
| Q |
276 |
caacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
22389444 |
caacttttgtgacaacttcttttttctctcttttcat |
22389480 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 312
Target Start/End: Original strand, 25302536 - 25302600
Alignment:
| Q |
249 |
tagtgttatttgaacaa-tcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
||||| ||||||||||| ||| | |||||| |||||||| ||||| |||||||||||||||||| |
|
|
| T |
25302536 |
tagtgatatttgaacaactcattttagacaatttatgtgacaactttttttttctctcttttcat |
25302600 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0154 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0154
Description:
Target: scaffold0154; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 245 - 312
Target Start/End: Original strand, 9736 - 9803
Alignment:
| Q |
245 |
tgagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||||||||||||||||||||||| ||||| |||||| ||||| ||||| |||||| ||||||||||| |
|
|
| T |
9736 |
tgagtagtgttatttgaacaatcatatgaggcaacttttgtgacaacttattttttttctcttttcat |
9803 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0501 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0501
Description:
Target: scaffold0501; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 245 - 312
Target Start/End: Original strand, 10404 - 10471
Alignment:
| Q |
245 |
tgagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||| |||||||||||||||| || |||||||||||| ||||| ||||| |||| ||||||||||||| |
|
|
| T |
10404 |
tgagcagtgttatttgaacaaccatatgagacaacttttgtgacaacttattttctctctcttttcat |
10471 |
T |
 |
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Target: scaffold0148 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0148
Description:
Target: scaffold0148; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 309
Target Start/End: Complemental strand, 9636 - 9570
Alignment:
| Q |
243 |
tttgagtagtgttatttgaacaatcaaatgagacaacttatgtgataacttcttttttctctctttt |
309 |
Q |
| |
|
||||||||||| ||||||||||| | |||||||| ||| ||||||||||| ||||||||||||| |
|
|
| T |
9636 |
tttgagtagtgatatttgaacaactatatgagacagctttggtgataacttccattttctctctttt |
9570 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 312
Target Start/End: Complemental strand, 6584 - 6543
Alignment:
| Q |
271 |
tgagacaacttatgtgataacttcttttttctctcttttcat |
312 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
6584 |
tgagacaactctcgtgataacttcttttttctctcttttcat |
6543 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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