View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19372_low_29 (Length: 273)

Name: NF19372_low_29
Description: NF19372
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19372_low_29
NF19372_low_29
[»] chr1 (10 HSPs)
chr1 (19-265)||(4570831-4571082)
chr1 (20-196)||(4014949-4015132)
chr1 (55-179)||(10218930-10219054)
chr1 (59-179)||(4366496-4366616)
chr1 (59-190)||(39379051-39379182)
chr1 (55-196)||(21855367-21855508)
chr1 (59-190)||(17560763-17560894)
chr1 (55-196)||(4016756-4016897)
chr1 (105-181)||(50645484-50645560)
chr1 (115-164)||(15961233-15961282)
[»] chr7 (43 HSPs)
chr7 (59-180)||(29921993-29922114)
chr7 (59-179)||(29867188-29867305)
chr7 (79-180)||(29874480-29874581)
chr7 (59-179)||(29881205-29881325)
chr7 (59-180)||(29454103-29454224)
chr7 (55-180)||(29859399-29859524)
chr7 (59-179)||(29106757-29106883)
chr7 (62-173)||(29445663-29445774)
chr7 (110-180)||(14076678-14076748)
chr7 (110-180)||(14386706-14386776)
chr7 (110-181)||(1985954-1986025)
chr7 (108-178)||(29899372-29899442)
chr7 (111-180)||(660847-660916)
chr7 (67-180)||(29431001-29431111)
chr7 (110-178)||(19344577-19344645)
chr7 (104-180)||(20352089-20352165)
chr7 (104-180)||(22100487-22100563)
chr7 (116-179)||(19604464-19604527)
chr7 (59-133)||(29885197-29885271)
chr7 (63-180)||(29476340-29476457)
chr7 (59-156)||(29920067-29920164)
chr7 (104-180)||(22063636-22063712)
chr7 (104-162)||(20338918-20338976)
chr7 (104-190)||(20374493-20374579)
chr7 (116-181)||(18514786-18514851)
chr7 (112-180)||(6864807-6864875)
chr7 (110-178)||(22028628-22028696)
chr7 (105-181)||(22070106-22070182)
chr7 (104-160)||(22080862-22080918)
chr7 (62-169)||(29895418-29895528)
chr7 (105-180)||(19637217-19637292)
chr7 (105-180)||(24010378-24010453)
chr7 (118-180)||(13416911-13416973)
chr7 (110-180)||(20058057-20058127)
chr7 (104-162)||(36263047-36263105)
chr7 (104-157)||(9807818-9807871)
chr7 (105-178)||(12819918-12819991)
chr7 (105-162)||(36255361-36255418)
chr7 (110-178)||(19722018-19722086)
chr7 (103-179)||(23993528-23993604)
chr7 (112-180)||(26003031-26003099)
chr7 (59-91)||(29899317-29899349)
chr7 (104-176)||(36260247-36260319)
[»] chr3 (3 HSPs)
chr3 (59-180)||(3625683-3625804)
chr3 (110-180)||(25901279-25901349)
chr3 (110-180)||(25915297-25915367)
[»] chr4 (10 HSPs)
chr4 (59-190)||(3557675-3557806)
chr4 (59-190)||(3560948-3561079)
chr4 (59-190)||(3565693-3565824)
chr4 (103-180)||(53774833-53774910)
chr4 (104-180)||(11970982-11971058)
chr4 (110-179)||(53430100-53430169)
chr4 (104-180)||(11981683-11981759)
chr4 (59-190)||(1686275-1686406)
chr4 (110-176)||(837776-837842)
chr4 (105-178)||(53790548-53790621)
[»] chr5 (5 HSPs)
chr5 (55-196)||(24330883-24331024)
chr5 (116-180)||(18964830-18964894)
chr5 (102-178)||(29597554-29597630)
chr5 (104-178)||(29647670-29647744)
chr5 (104-178)||(29642353-29642427)
[»] chr6 (9 HSPs)
chr6 (110-181)||(6921349-6921420)
chr6 (110-178)||(6954521-6954589)
chr6 (112-180)||(6947880-6947948)
chr6 (104-180)||(20770644-20770720)
chr6 (121-180)||(17369675-17369734)
chr6 (114-181)||(6935217-6935284)
chr6 (110-181)||(6942966-6943037)
chr6 (105-159)||(19746715-19746769)
chr6 (110-174)||(24950150-24950214)
[»] chr2 (8 HSPs)
chr2 (113-181)||(14514903-14514971)
chr2 (110-176)||(20975558-20975624)
chr2 (116-180)||(554482-554546)
chr2 (110-178)||(18908811-18908879)
chr2 (110-178)||(18913559-18913627)
chr2 (110-178)||(18920767-18920835)
chr2 (110-165)||(25698507-25698562)
chr2 (109-159)||(20967699-20967749)
[»] scaffold0867 (1 HSPs)
scaffold0867 (104-180)||(4669-4745)
[»] scaffold0649 (1 HSPs)
scaffold0649 (102-180)||(5430-5508)
[»] chr8 (2 HSPs)
chr8 (104-180)||(27618485-27618561)
chr8 (112-180)||(29390288-29390356)
[»] scaffold0354 (1 HSPs)
scaffold0354 (118-176)||(7471-7529)


Alignment Details
Target: chr1 (Bit Score: 219; Significance: 1e-120; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 19 - 265
Target Start/End: Original strand, 4570831 - 4571082
Alignment:
Q  19 gcctcgtggggttgatgaagtgccgccgaacttgc-tactattggtgt----gttgggaggctgcctttgtttttcttattcacacagggaaactgattt 113  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  4570831 gcctcgtggggttgatgaagtgccgccgaactagcctactattggtgtgtgtgttgggaggctgcctttgtttttcttattcacacagggaaactgattt 4570930  T
Q  114 tgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagttatagtgatcttctaatagcttactatgacttgcgt 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4570931 tgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagttatagtgatcttctaatagcttactatgacttgcgt 4571030  T
Q  214 gacagtgacaaaaggtattttcaactgatgctattatttctttctgatgatg 265  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  4571031 gacagtgacaaaaggtattttcaactgatgctattatttctttctgacgatg 4571082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 20 - 196
Target Start/End: Complemental strand, 4015132 - 4014949
Alignment:
Q  20 cctcgtggggttgatgaagtgccgccgaacttgcta-ctattggtgtgttgggaggctgcctttgtttttcttattcacacagggaaactgattttg--- 115  Q
    |||||||| ||||||||||||| |||  ||| || | ||||||||||| |||||||||||||||||||||||||||  |||||||||||| ||||||       
T  4015132 cctcgtggcgttgatgaagtgctgcctgactcgccaactattggtgtgctgggaggctgcctttgtttttcttatttgcacagggaaactcattttgata 4015033  T
Q  116 ---ttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagttatagtgatcttctaatag 196  Q
       |||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||   ||||||||||||||    
T  4015032 ttgttatatggcagatgaagaaatttggggttgaagattcttggactcaattccttaaagttagttaccatgatcttctaatag 4014949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 55 - 179
Target Start/End: Original strand, 10218930 - 10219054
Alignment:
Q  55 actattggtgtgttgggaggctgcctttgtttttcttattcacacagggaaactgattttgttatatggcaaatgaagaaatttggggttgaagattctt 154  Q
    ||||||||||||||||| || |||||||||||||||| ||  |||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  10218930 actattggtgtgttggggggttgcctttgtttttcttttttgcacaaggaaactgattttgttgtatggcaaatgaagaaatttgggattgaagattctt 10219029  T
Q  155 ggactcaattgcttaaaattagtta 179  Q
    |||||||||| ||||||||||||||    
T  10219030 ggactcaattacttaaaattagtta 10219054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 59 - 179
Target Start/End: Complemental strand, 4366616 - 4366496
Alignment:
Q  59 ttggtgtgttgggaggctgcctttgtttttcttattcacacagggaaactgattttgttatatggcaaatgaagaaatttggggttgaagattcttggac 158  Q
    ||||||||||||| | |||||||||||||||||||||  ||| | |||||||||||||| ||||||| ||||||||||| ||||||||||| ||||||||    
T  4366616 ttggtgtgttgggggactgcctttgtttttcttattcttacaagaaaactgattttgttttatggcagatgaagaaattcggggttgaagagtcttggac 4366517  T
Q  159 tcaattgcttaaaattagtta 179  Q
    || ||| |||||| |||||||    
T  4366516 tccatttcttaaagttagtta 4366496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 59 - 190
Target Start/End: Complemental strand, 39379182 - 39379051
Alignment:
Q  59 ttggtgtgttgggaggctgcctttgtttttcttattcacacagggaaactgattttgttatatggcaaatgaagaaatttggggttgaagattcttggac 158  Q
    ||||||||||||| | ||| ||||||||||||||||   ||||  ||||||||||| |||||||||| |||||| |||||||||||||||| ||||||||    
T  39379182 ttggtgtgttgggtgactgtctttgtttttcttattgttacagaaaaactgattttattatatggcagatgaaggaatttggggttgaagagtcttggac 39379083  T
Q  159 tcaattgcttaaaattagttatagtgatcttc 190  Q
    |||||| |||||||| ||||||  ||||||||    
T  39379082 tcaatttcttaaaatcagttatcatgatcttc 39379051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 55 - 196
Target Start/End: Complemental strand, 21855508 - 21855367
Alignment:
Q  55 actattggtgtgttgggaggctgcctttgtttttcttattcacacagggaaactgattttgttatatggcaaatgaagaaatttggggttgaagattctt 154  Q
    ||||||||||| ||| | ||||| ||||||||||| |||||  ||| |||||| ||||||||||||||| | |||||| |||||||||||||||||||||    
T  21855508 actattggtgtattgaggggctgtctttgtttttcatattcgtacaaggaaaccgattttgttatatgggagatgaaggaatttggggttgaagattctt 21855409  T
Q  155 ggactcaattgcttaaaattagttatagtgatcttctaatag 196  Q
    |||||||| | |||||| |||||||   | ||||||||||||    
T  21855408 ggactcaactccttaaagttagttaccataatcttctaatag 21855367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 59 - 190
Target Start/End: Complemental strand, 17560894 - 17560763
Alignment:
Q  59 ttggtgtgttgggaggctgcctttgtttttcttattcacacagggaaactgattttgttatatggcaaatgaagaaatttggggttgaagattcttggac 158  Q
    ||||||||||||| | ||| ||||||||||||||||   ||| |||||  ||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  17560894 ttggtgtgttgggggactgtctttgtttttcttattgttacaaggaaatcgatttggttatatggcacatgaagaaatttggggttgaagattcttggac 17560795  T
Q  159 tcaattgcttaaaattagttatagtgatcttc 190  Q
     | ||| |||| |||||||||||  |||||||    
T  17560794 accattccttataattagttataacgatcttc 17560763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 55 - 196
Target Start/End: Complemental strand, 4016897 - 4016756
Alignment:
Q  55 actattggtgtgttgggaggctgcctttgtttttcttattcacacagggaaactgattttgttatatggcaaatgaagaaatttggggttgaagattctt 154  Q
    |||||| |||||||||| |||||||||||||||||||||||  | ||| ||||  ||||   ||| ||||| |||||||||||||| ||||||||||| |    
T  4016897 actattagtgtgttggggggctgcctttgtttttcttattcctataggcaaaccaatttctgtatctggcagatgaagaaatttggagttgaagattcct 4016798  T
Q  155 ggactcaattgcttaaaattagttatagtgatcttctaatag 196  Q
    ||||||| ||| ||||| |||||||   ||||||||||||||    
T  4016797 ggactcagttgtttaaatttagttaccatgatcttctaatag 4016756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 181
Target Start/End: Complemental strand, 50645560 - 50645484
Alignment:
Q  105 aactgattttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagttata 181  Q
    |||| |||||||||| |||||||||||| | ||||| ||| |||| ||||||| ||||||  |||||||||||||||    
T  50645560 aactcattttgttatgtggcaaatgaaggattttggagttcaagagtcttggattcaattatttaaaattagttata 50645484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 164
Target Start/End: Original strand, 15961233 - 15961282
Alignment:
Q  115 gttatatggcaaatgaagaaatttggggttgaagattcttggactcaatt 164  Q
    ||||||||| |||||||||||||||| | |||||| ||||||||||||||    
T  15961233 gttatatggaaaatgaagaaatttggagctgaagaatcttggactcaatt 15961282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 78; Significance: 2e-36; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 59 - 180
Target Start/End: Complemental strand, 29922114 - 29921993
Alignment:
Q  59 ttggtgtgttgggaggctgcctttgtttttcttattcacacagggaaactgattttgttatatggcaaatgaagaaatttggggttgaagattcttggac 158  Q
    ||||||||||||| ||||||||||||||||||||| |  |||  ||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |    
T  29922114 ttggtgtgttggggggctgcctttgtttttcttatgcttacaaagaaactgattttgttatatggcagatgaagaaatttggggatgaagattcttggtc 29922015  T
Q  159 tcaattgcttaaaattagttat 180  Q
    |||||| |||| ||||||||||    
T  29922014 tcaattccttagaattagttat 29921993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 59 - 179
Target Start/End: Original strand, 29867188 - 29867305
Alignment:
Q  59 ttggtgtgttgggaggctgcctttgtttttcttattcacacagggaaactgattttgttatatggcaaatgaagaaatttggggttgaagattcttggac 158  Q
    ||||||||||||| | |||||||||||||||||||||  |   ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  29867188 ttggtgtgttgggggactgcctttgtttttcttattctaa---ggaaactgattttattatatggcaaatgaagaaattcggggttgaagattcttggac 29867284  T
Q  159 tcaattgcttaaaattagtta 179  Q
    |||||| |||| |||||||||    
T  29867285 tcaattccttagaattagtta 29867305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 79 - 180
Target Start/End: Original strand, 29874480 - 29874581
Alignment:
Q  79 ctttgtttttcttattcacacagggaaactgattttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagtt 178  Q
    ||||||||||||||||   ||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  29874480 ctttgtttttcttattgttacaaggaaactgatttcattatatggcaaatgaagaaatttggggttgaagattcttggactccattacttaaaattagtt 29874579  T
Q  179 at 180  Q
    ||    
T  29874580 at 29874581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 59 - 179
Target Start/End: Original strand, 29881205 - 29881325
Alignment:
Q  59 ttggtgtgttgggaggctgcctttgtttttcttattcacacagggaaactgattttgttatatggcaaatgaagaaatttggggttgaagattcttggac 158  Q
    ||||||||||||  | ||||||||| |||| |||||   ||| ||||||||||||| || | ||||||||||||||||||||||||||||||||||||||    
T  29881205 ttggtgtgttggaggactgcctttgcttttgttattgttacaaggaaactgattttattgtttggcaaatgaagaaatttggggttgaagattcttggac 29881304  T
Q  159 tcaattgcttaaaattagtta 179  Q
    |||||| |||| |||||||||    
T  29881305 tcaattccttagaattagtta 29881325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 59 - 180
Target Start/End: Complemental strand, 29454224 - 29454103
Alignment:
Q  59 ttggtgtgttgggaggctgcctttgtttttcttattcacacagggaaactgattttgttatatggcaaatgaagaaatttggggttgaagattcttggac 158  Q
    ||||||| ||||| ||  |||||||||||||||||||  ||| |||| | ||||||||||||||||  |||| ||||||||| |||||||||||||||||    
T  29454224 ttggtgttttggggggaagcctttgtttttcttattcttacaaggaacccgattttgttatatggcggatgatgaaatttggagttgaagattcttggac 29454125  T
Q  159 tcaattgcttaaaattagttat 180  Q
    ||||||  ||||||||||||||    
T  29454124 tcaattctttaaaattagttat 29454103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 55 - 180
Target Start/End: Original strand, 29859399 - 29859524
Alignment:
Q  55 actattggtgtgttgggaggctgcctttgtttttcttattcacacagggaaactgattttgttatatggcaaatgaagaaatttggggttgaagattctt 154  Q
    ||||||||||||||||| | |   ||||||||||||||||   ||| ||||| |||||| ||||||||| | |||||||||||||| |||||||||||||    
T  29859399 actattggtgtgttgggggaccatctttgtttttcttattgttacaaggaaattgatttcgttatatgggagatgaagaaatttggagttgaagattctt 29859498  T
Q  155 ggactcaattgcttaaaattagttat 180  Q
    |||| | ||| |||||||||||||||    
T  29859499 ggaccccatttcttaaaattagttat 29859524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 59 - 179
Target Start/End: Original strand, 29106757 - 29106883
Alignment:
Q  59 ttggtgtgttgggaggctgcctttgtttttcttattcacacagggaaac------tgattttgttatatggcaaatgaagaaatttggggttgaagattc 152  Q
    ||||||||||||| |||||||||||||||||||||| | ||    ||||      |||||||||| ||||||| ||||||||||||||||||||||| ||    
T  29106757 ttggtgtgttggggggctgcctttgtttttcttatttatacgtaaaaacagattttgattttgttgtatggcagatgaagaaatttggggttgaagagtc 29106856  T
Q  153 ttggactcaattgcttaaaattagtta 179  Q
    |||||||||| |  |||||||||||||    
T  29106857 ttggactcaactttttaaaattagtta 29106883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 62 - 173
Target Start/End: Complemental strand, 29445774 - 29445663
Alignment:
Q  62 gtgtgttgggaggctgcctttgtttttcttattcacacagggaaactgattttgttatatggcaaatgaagaaatttggggttgaagattcttggactca 161  Q
    |||||||||| |||| |||||||| ||||||||   ||| |||||| |||||| |||||||||| |||||| |||| ||||||||||| |||||||||||    
T  29445774 gtgtgttggggggcttcctttgttgttcttatttttacaaggaaaccgattttcttatatggcagatgaaggaattaggggttgaagactcttggactca 29445675  T
Q  162 attgcttaaaat 173  Q
    ||| || |||||    
T  29445674 atttctaaaaat 29445663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 110 - 180
Target Start/End: Original strand, 14076678 - 14076748
Alignment:
Q  110 attttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagttat 180  Q
    |||| |||||||||||||||||| ||||||| |||||||| |||||||||||||| |||||||||||||||    
T  14076678 atttcgttatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaattagttat 14076748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 110 - 180
Target Start/End: Original strand, 14386706 - 14386776
Alignment:
Q  110 attttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagttat 180  Q
    |||| |||||||||||||||||| ||||||| |||||||| |||||||||||||| |||||||||||||||    
T  14386706 atttcgttatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaattagttat 14386776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 110 - 181
Target Start/End: Complemental strand, 1986025 - 1985954
Alignment:
Q  110 attttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagttata 181  Q
    |||||||| | |||||||||||| ||||||| |||||||| ||||||||||||||| |||||||||||||||    
T  1986025 attttgttctttggcaaatgaaggaatttggcgttgaagaatcttggactcaattgtttaaaattagttata 1985954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 108 - 178
Target Start/End: Original strand, 29899372 - 29899442
Alignment:
Q  108 tgattttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagtt 178  Q
    |||||||||||||||||| ||||||||||||||||||||||| || |||||||||||  | ||||||||||    
T  29899372 tgattttgttatatggcagatgaagaaatttggggttgaagagtcctggactcaatttttaaaaattagtt 29899442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 111 - 180
Target Start/End: Complemental strand, 660916 - 660847
Alignment:
Q  111 ttttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagttat 180  Q
    ||||||||||||||| |||||| ||||| | |||||||| |||||||||||||| |||||||||||||||    
T  660916 ttttgttatatggcagatgaaggaatttcgagttgaagagtcttggactcaattccttaaaattagttat 660847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 67 - 180
Target Start/End: Complemental strand, 29431111 - 29431001
Alignment:
Q  67 ttgggaggctgcctttgtttttcttattcacacagggaaactgattttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgc 166  Q
    ||||| || ||||||||||||||||||||  |   ||| ||  |||||||||||||||  |||| ||||||||||| | ||||||||||||| ||||| |    
T  29431111 ttggggggatgcctttgtttttcttattctaa---ggacacctattttgttatatggcggatgatgaaatttggggctaaagattcttggacccaattcc 29431015  T
Q  167 ttaaaattagttat 180  Q
    ||||||||||||||    
T  29431014 ttaaaattagttat 29431001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 110 - 178
Target Start/End: Complemental strand, 19344645 - 19344577
Alignment:
Q  110 attttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagtt 178  Q
    |||||||||||||||| |||| | ||||||| |||||| | |||||||||||||| |||||||||||||    
T  19344645 attttgttatatggcagatgatggaatttggagttgaacaatcttggactcaatttcttaaaattagtt 19344577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 104 - 180
Target Start/End: Original strand, 20352089 - 20352165
Alignment:
Q  104 aaactgattttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagttat 180  Q
    ||||| ||||||| |||||| |||||||| ||||||| ||||||||||| ||||||||| |  ||||||||||||||    
T  20352089 aaactcattttgtaatatgggaaatgaaggaatttggagttgaagattcatggactcaactttttaaaattagttat 20352165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 104 - 180
Target Start/End: Original strand, 22100487 - 22100563
Alignment:
Q  104 aaactgattttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagttat 180  Q
    ||||| ||||| ||||||||||||||||||||||||| ||| |||| ||||||||||| ||  | ||||||||||||    
T  22100487 aaactcattttattatatggcaaatgaagaaatttggagttcaagagtcttggactcagttattcaaaattagttat 22100563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 179
Target Start/End: Complemental strand, 19604527 - 19604464
Alignment:
Q  116 ttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagtta 179  Q
    |||||||||| |||||| ||||||| |||||||| || ||||||||||| ||||||||||||||    
T  19604527 ttatatggcagatgaaggaatttggagttgaagactcctggactcaattccttaaaattagtta 19604464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 59 - 133
Target Start/End: Original strand, 29885197 - 29885271
Alignment:
Q  59 ttggtgtgttgggaggctgcctttgtttttcttattcacacagggaaactgattttgttatatggcaaatgaaga 133  Q
    |||||||| | || ||||||||||||||||||||||    || |||||||||||||||||||||||| |||||||    
T  29885197 ttggtgtgctagggggctgcctttgtttttcttatttttccaaggaaactgattttgttatatggcagatgaaga 29885271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 63 - 180
Target Start/End: Complemental strand, 29476457 - 29476340
Alignment:
Q  63 tgtgttgggaggctgcctttgtttttcttattcacacagggaaactgattttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaa 162  Q
    ||||||||| |||| |||||||| ||| ||||   ||| |||||| |||||| |||||||||| |||||| |||| |||  |||  | ||||||||||||    
T  29476457 tgtgttggggggcttcctttgttgttcctatttttacaaggaaaccgattttcttatatggcagatgaaggaattagggaatgacaactcttggactcaa 29476358  T
Q  163 ttgcttaaaattagttat 180  Q
    || |||||||| ||||||    
T  29476357 tttcttaaaataagttat 29476340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 156
Target Start/End: Complemental strand, 29920164 - 29920067
Alignment:
Q  59 ttggtgtgttgggaggctgcctttgtttttcttattcacacagggaaactgattttgttatatggcaaatgaagaaatttggggttgaagattcttgg 156  Q
    |||||||||||||||||||||||| || |||||||||  ||| |||||| || ||| | |||||| | ||||||||||| ||  ||||| ||||||||    
T  29920164 ttggtgtgttgggaggctgccttttttcttcttattcttacaaggaaaccgaatttataatatggaagatgaagaaattcggacttgaatattcttgg 29920067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 104 - 180
Target Start/End: Original strand, 22063636 - 22063712
Alignment:
Q  104 aaactgattttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagttat 180  Q
    ||||| ||||||||||||||||||||||| |||||||  || |||| ||||||||||| ||  | ||||||||||||    
T  22063636 aaactcattttgttatatggcaaatgaaggaatttggatttcaagagtcttggactcagttattcaaaattagttat 22063712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 20338918 - 20338976
Alignment:
Q  104 aaactgattttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaa 162  Q
    ||||| ||||||| |||||| |||||||| |||| || |||||||||||||||||||||    
T  20338918 aaactcattttgtaatatggaaaatgaaggaattaggagttgaagattcttggactcaa 20338976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 20374579 - 20374493
Alignment:
Q  104 aaactgattttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagttatagtgatcttc 190  Q
    ||||| ||||||| |||||| |||||||| ||||||| |||| |||||| |||| |||| |  ||||||||||||||| | ||||||    
T  20374579 aaactcattttgtaatatgggaaatgaaggaatttggagttggagattcatggattcaactttttaaaattagttataataatcttc 20374493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 181
Target Start/End: Complemental strand, 18514851 - 18514786
Alignment:
Q  116 ttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagttata 181  Q
    |||||||| ||||| |  ||||||| |||||| | |||||||||||||| ||||||||||||||||    
T  18514851 ttatatggaaaatggacgaatttggagttgaaaactcttggactcaattccttaaaattagttata 18514786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 180
Target Start/End: Complemental strand, 6864875 - 6864807
Alignment:
Q  112 tttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagttat 180  Q
    ||||| ||||||  ||||||| ||||||| |||||||| ||||||||||| || ||||||| |||||||    
T  6864875 tttgtaatatggttaatgaaggaatttggagttgaagagtcttggactcagttccttaaaactagttat 6864807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 178
Target Start/End: Original strand, 22028628 - 22028696
Alignment:
Q  110 attttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagtt 178  Q
    |||||||||||||| |||||| | | | ||| |||||||| |||||||||||||| ||||| |||||||    
T  22028628 attttgttatatggaaaatgacggattatggagttgaagagtcttggactcaattacttaagattagtt 22028696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 181
Target Start/End: Original strand, 22070106 - 22070182
Alignment:
Q  105 aactgattttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagttata 181  Q
    |||| ||||| ||||||||||||||||| ||||||| ||| |||| ||||||||||  ||  | |||||||||||||    
T  22070106 aactcattttattatatggcaaatgaagcaatttggagttcaagagtcttggactcggttattcaaaattagttata 22070182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 160
Target Start/End: Original strand, 22080862 - 22080918
Alignment:
Q  104 aaactgattttgttatatggcaaatgaagaaatttggggttgaagattcttggactc 160  Q
    ||||| ||||| ||||||||||||||||| ||||||| ||| |||| ||||||||||    
T  22080862 aaactcattttattatatggcaaatgaagcaatttggagttcaagagtcttggactc 22080918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 169
Target Start/End: Original strand, 29895418 - 29895528
Alignment:
Q  62 gtgtgttgggaggctgcctttgtttttcttattcac---acagggaaactgattttgttatatggcaaatgaagaaatttggggttgaagattcttggac 158  Q
    |||| ||||| ||||| |||||||||||||||||     ||| |||||  || |||||| ||||||| ||||||||||||||| | ||||| |||||||     
T  29895418 gtgtcttgggtggctgtctttgtttttcttattcttctgacaaggaaaacgaatttgttttatggcagatgaagaaatttgggatagaagagtcttggag 29895517  T
Q  159 tcaattgctta 169  Q
    |||||| ||||    
T  29895518 tcaattactta 29895528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 105 - 180
Target Start/End: Complemental strand, 19637292 - 19637217
Alignment:
Q  105 aactgattttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagttat 180  Q
    |||||||||| ||||||||||||||||| ||||||| ||| |||| || |||| ||   | |||||||||||||||    
T  19637292 aactgattttattatatggcaaatgaaggaatttggagttcaagagtcgtggattcggctccttaaaattagttat 19637217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 105 - 180
Target Start/End: Original strand, 24010378 - 24010453
Alignment:
Q  105 aactgattttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagttat 180  Q
    |||||| |||||| ||||||| |||||| | |  |||||| |||| |||||||||||||| ||||| |||||||||    
T  24010378 aactgaatttgttttatggcatatgaaggagtacggggttcaagagtcttggactcaattacttaagattagttat 24010453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 180
Target Start/End: Complemental strand, 13416973 - 13416911
Alignment:
Q  118 atatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagttat 180  Q
    ||||||||||||||| ||||||| |||||||| ||||||  | ||||  ||||||||||||||    
T  13416973 atatggcaaatgaaggaatttggagttgaagagtcttgggttgaattcgttaaaattagttat 13416911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 180
Target Start/End: Complemental strand, 20058127 - 20058057
Alignment:
Q  110 attttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagttat 180  Q
    |||||||||||||| ||||| || ||||  | |||||||| ||||||  |||||| |||||||||||||||    
T  20058127 attttgttatatggaaaatggaggaattcagagttgaagagtcttggtgtcaatttcttaaaattagttat 20058057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 36263047 - 36263105
Alignment:
Q  104 aaactgattttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaa 162  Q
    |||||||||||||||||||| | ||| |  ||||||| |||||||| ||||||||||||    
T  36263047 aaactgattttgttatatggaagatggaagaatttggagttgaagagtcttggactcaa 36263105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 9807818 - 9807871
Alignment:
Q  104 aaactgattttgttatatggcaaatgaagaaatttggggttgaagattcttgga 157  Q
    |||| ||||| ||||||||||| |||||| ||||||| |||||||| |||||||    
T  9807818 aaaccgatttcgttatatggcagatgaaggaatttggagttgaagagtcttgga 9807871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 105 - 178
Target Start/End: Complemental strand, 12819991 - 12819918
Alignment:
Q  105 aactgattttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagtt 178  Q
    |||| |||||||| ||||||| |||| | ||||||| |||||| | || ||||||||||| |||||||| ||||    
T  12819991 aacttattttgttgtatggcagatgacggaatttggagttgaacaatcctggactcaattccttaaaatcagtt 12819918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 36255361 - 36255418
Alignment:
Q  105 aactgattttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaa 162  Q
    ||||| ||| ||||||||| ||||| | |||||||| |||||||| ||||||||||||    
T  36255361 aactggtttagttatatggaaaatggaaaaatttggagttgaagagtcttggactcaa 36255418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 178
Target Start/End: Original strand, 19722018 - 19722086
Alignment:
Q  110 attttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagtt 178  Q
    |||||||| ||||| | |||| | ||||||| ||| ||||||||||||||||||| || ||||| ||||    
T  19722018 attttgttttatggaagatgatggaatttggagttcaagattcttggactcaattcctcaaaatcagtt 19722086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 179
Target Start/End: Original strand, 23993528 - 23993604
Alignment:
Q  103 gaaactgattttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagtta 179  Q
    |||||||| |||||| ||||||| |||||| | |  |||||| |||| ||||||||||||||  |||| ||||||||    
T  23993528 gaaactgaatttgttttatggcatatgaaggagtacggggttcaagagtcttggactcaattatttaagattagtta 23993604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 180
Target Start/End: Complemental strand, 26003099 - 26003031
Alignment:
Q  112 tttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagttat 180  Q
    |||||| |||||||||||||  | | ||||||||||  |||||||||||||||| | ||| ||||||||    
T  26003099 tttgttttatggcaaatgaatgagtatggggttgaaagttcttggactcaattgttgaaacttagttat 26003031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 91
Target Start/End: Original strand, 29899317 - 29899349
Alignment:
Q  59 ttggtgtgttgggaggctgcctttgtttttctt 91  Q
    ||||||||||||| |||||||||||||||||||    
T  29899317 ttggtgtgttggggggctgcctttgtttttctt 29899349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 176
Target Start/End: Original strand, 36260247 - 36260319
Alignment:
Q  104 aaactgattttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattag 176  Q
    |||||||||||||||||||| | ||| |  ||||||| |||||||| ||||||| |||| |  ||||||||||    
T  36260247 aaactgattttgttatatggaagatggaagaatttggagttgaagagtcttggattcaacttattaaaattag 36260319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 5e-34; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 59 - 180
Target Start/End: Original strand, 3625683 - 3625804
Alignment:
Q  59 ttggtgtgttgggaggctgcctttgtttttcttattcacacagggaaactgattttgttatatggcaaatgaagaaatttggggttgaagattcttggac 158  Q
    ||||||||||||| | |||||||||||||||||||||  ||| || |||  || || |||||||||||||||||||||||||||||||||| ||||||||    
T  3625683 ttggtgtgttgggggactgcctttgtttttcttattcttacaaggtaacctatcttattatatggcaaatgaagaaatttggggttgaagagtcttggac 3625782  T
Q  159 tcaattgcttaaaattagttat 180  Q
    |||||| |||||||||||||||    
T  3625783 tcaatttcttaaaattagttat 3625804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 180
Target Start/End: Complemental strand, 25901349 - 25901279
Alignment:
Q  110 attttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagttat 180  Q
    |||||||||||||| |||||||| | ||| | ||| |||| ||||||| ||||||| | ||||||||||||    
T  25901349 attttgttatatggaaaatgaaggattttcgagttcaagagtcttggattcaattgttaaaaattagttat 25901279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 180
Target Start/End: Complemental strand, 25915367 - 25915297
Alignment:
Q  110 attttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagttat 180  Q
    |||||||||||||| |||||||| | ||| | ||| |||| ||||||| ||||||| | ||||||||||||    
T  25915367 attttgttatatggaaaatgaaggattttcgagttcaagagtcttggattcaattgttaaaaattagttat 25915297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 8e-33; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 59 - 190
Target Start/End: Original strand, 3557675 - 3557806
Alignment:
Q  59 ttggtgtgttgggaggctgcctttgtttttcttattcacacagggaaactgattttgttatatggcaaatgaagaaatttggggttgaagattcttggac 158  Q
    ||||||||||| | | ||| |||||||||||||||||  ||| |||||| |||||| |||||||||| |||||| |||||||||||||||| ||||||||    
T  3557675 ttggtgtgttgagggactgtctttgtttttcttattcttacaaggaaaccgattttattatatggcatatgaaggaatttggggttgaagagtcttggac 3557774  T
Q  159 tcaattgcttaaaattagttatagtgatcttc 190  Q
    |||||| |||||||||||||||  ||||||||    
T  3557775 tcaatttcttaaaattagttatcatgatcttc 3557806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 59 - 190
Target Start/End: Complemental strand, 3561079 - 3560948
Alignment:
Q  59 ttggtgtgttgggaggctgcctttgtttttcttattcacacagggaaactgattttgttatatggcaaatgaagaaatttggggttgaagattcttggac 158  Q
    ||||||| ||||| |  ||||||||||||||||||||  ||| |||||| |||||| |||| ||||| ||||| ||||||||||||||||| ||||||||    
T  3561079 ttggtgtcttgggggattgcctttgtttttcttattcttacaaggaaaccgattttattatttggcagatgaaaaaatttggggttgaagagtcttggac 3560980  T
Q  159 tcaattgcttaaaattagttatagtgatcttc 190  Q
    |||||| |||||||||||||||  ||||||||    
T  3560979 tcaatttcttaaaattagttatcatgatcttc 3560948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 59 - 190
Target Start/End: Original strand, 3565693 - 3565824
Alignment:
Q  59 ttggtgtgttgggaggctgcctttgtttttcttattcacacagggaaactgattttgttatatggcaaatgaagaaatttggggttgaagattcttggac 158  Q
    ||||||||||| | | ||||||||||||||||||||   | | | |||| |||||| |||||||||| |||||| |||||||||||||||| ||||||||    
T  3565693 ttggtgtgttgagggactgcctttgtttttcttattgttataagaaaaccgattttattatatggcagatgaaggaatttggggttgaagagtcttggac 3565792  T
Q  159 tcaattgcttaaaattagttatagtgatcttc 190  Q
    |||||| |||||||||||||||  ||||||||    
T  3565793 tcaatttcttaaaattagttatcatgatcttc 3565824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 103 - 180
Target Start/End: Original strand, 53774833 - 53774910
Alignment:
Q  103 gaaactgattttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagttat 180  Q
    |||||| ||||||||||||||||||||||| ||||||| |||||||| |||||||||||||| |||||||||||||||    
T  53774833 gaaactcattttgttatatggcaaatgaaggaatttggagttgaagagtcttggactcaattccttaaaattagttat 53774910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 104 - 180
Target Start/End: Complemental strand, 11971058 - 11970982
Alignment:
Q  104 aaactgattttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagttat 180  Q
    ||||| ||||||||||||||||||||||| ||||||| || ||||| |||||||||||||| |||| ||||||||||    
T  11971058 aaactcattttgttatatggcaaatgaaggaatttggagtggaagagtcttggactcaatttcttagaattagttat 11970982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 110 - 179
Target Start/End: Complemental strand, 53430169 - 53430100
Alignment:
Q  110 attttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagtta 179  Q
    ||||||| |||||||| |||||||||| |||||  |||||||||||||||||||| ||||||||||||||    
T  53430169 attttgtcatatggcagatgaagaaatatggggccgaagattcttggactcaattccttaaaattagtta 53430100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 104 - 180
Target Start/End: Complemental strand, 11981759 - 11981683
Alignment:
Q  104 aaactgattttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagttat 180  Q
    ||||| ||||||||||||||||||||||| ||||||| || ||||| || ||||||| ||| |||||||||||||||    
T  11981759 aaactcattttgttatatggcaaatgaaggaatttggagtggaagagtcctggactcgatttcttaaaattagttat 11981683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 59 - 190
Target Start/End: Complemental strand, 1686406 - 1686275
Alignment:
Q  59 ttggtgtgttgggaggctgcctttgtttttcttattcacacagggaaactgattttgttatatggcaaatgaagaaatttggggttgaagattcttggac 158  Q
    ||||||||||||| | |||||||||||||||||||||  | | |   ||  || || |||||||||| |||||| ||||||| ||||| || ||||||||    
T  1686406 ttggtgtgttgggggactgcctttgtttttcttattcttataagaggaccaatcttattatatggcagatgaaggaatttggcgttgacgagtcttggac 1686307  T
Q  159 tcaattgcttaaaattagttatagtgatcttc 190  Q
    |||||| ||||||  |||||||  ||||||||    
T  1686306 tcaatttcttaaatatagttattatgatcttc 1686275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 110 - 176
Target Start/End: Original strand, 837776 - 837842
Alignment:
Q  110 attttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattag 176  Q
    ||||||||||||||||||||||||| ||||| ||| |||| ||||||| ||||||  ||||||||||    
T  837776 attttgttatatggcaaatgaagaattttggtgttcaagagtcttggattcaattatttaaaattag 837842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 105 - 178
Target Start/End: Original strand, 53790548 - 53790621
Alignment:
Q  105 aactgattttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagtt 178  Q
    |||| ||||| |||||||| | ||||  ||||||||  ||||| | |||||||||||||| |||||||||||||    
T  53790548 aactcattttattatatggaagatgacaaaatttggatttgaacaatcttggactcaatttcttaaaattagtt 53790621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 3e-29; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 55 - 196
Target Start/End: Complemental strand, 24331024 - 24330883
Alignment:
Q  55 actattggtgtgttgggaggctgcctttgtttttcttattcacacagggaaactgattttgttatatggcaaatgaagaaatttggggttgaagattctt 154  Q
    ||||||||||| ||| | ||||| ||||||||||| |||||  ||| |||||| ||||||||||||||| | |||||| |||||||||||||||||||||    
T  24331024 actattggtgtattgaggggctgtctttgtttttcatattcgtacaaggaaaccgattttgttatatgggagatgaaggaatttggggttgaagattctt 24330925  T
Q  155 ggactcaattgcttaaaattagttatagtgatcttctaatag 196  Q
    |||||||| | |||||| |||||||   | ||||||||||||    
T  24330924 ggactcaactccttaaagttagttaccataatcttctaatag 24330883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 116 - 180
Target Start/End: Complemental strand, 18964894 - 18964830
Alignment:
Q  116 ttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagttat 180  Q
    ||||||||||||||||| ||||||| |||||||| |||||||||||||| ||||||||| |||||    
T  18964894 ttatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttat 18964830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 102 - 178
Target Start/End: Complemental strand, 29597630 - 29597554
Alignment:
Q  102 ggaaactgattttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagtt 178  Q
    ||||||| |||||||||||||||||||||   ||||||| |||||| | |||||||||||||| |||||||||||||    
T  29597630 ggaaactcattttgttatatggcaaatgattgaatttggagttgaacaatcttggactcaattccttaaaattagtt 29597554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 104 - 178
Target Start/End: Original strand, 29647670 - 29647744
Alignment:
Q  104 aaactgattttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagtt 178  Q
    ||||| |||||||||||||||||||||   |||||||  ||||| | |||||||||||||| |||||||||||||    
T  29647670 aaactcattttgttatatggcaaatgatagaatttggatttgaacaatcttggactcaattccttaaaattagtt 29647744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 178
Target Start/End: Original strand, 29642353 - 29642427
Alignment:
Q  104 aaactgattttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagtt 178  Q
    ||||| |||| ||||||||||||||||   |||||||  ||||| | |||||||||||||| |||||||||||||    
T  29642353 aaactcatttcgttatatggcaaatgatagaatttggatttgaacaatcttggactcaattccttaaaattagtt 29642427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 7e-21; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 110 - 181
Target Start/End: Complemental strand, 6921420 - 6921349
Alignment:
Q  110 attttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagttata 181  Q
    |||||||||| |||||||||||| ||||||| |||||||| |||||||||||||| ||||||||||||||||    
T  6921420 attttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttata 6921349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 110 - 178
Target Start/End: Complemental strand, 6954589 - 6954521
Alignment:
Q  110 attttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagtt 178  Q
    |||||||||| |||||||||||| ||||||| |||||||| ||||||||||||||| ||||||||||||    
T  6954589 attttgttatttggcaaatgaaggaatttggagttgaagaatcttggactcaattgattaaaattagtt 6954521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 112 - 180
Target Start/End: Complemental strand, 6947948 - 6947880
Alignment:
Q  112 tttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagttat 180  Q
    |||||| | |||||||||||| ||||||| |||||||| |||||||||||||| |||||||||||||||    
T  6947948 tttgttctttggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttat 6947880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 104 - 180
Target Start/End: Original strand, 20770644 - 20770720
Alignment:
Q  104 aaactgattttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagttat 180  Q
    ||||| ||||||||||||||||||||||| |||||||  ||||||| || |||| |||||| |||||||||||||||    
T  20770644 aaacttattttgttatatggcaaatgaaggaatttggaattgaagagtcatggattcaattccttaaaattagttat 20770720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 17369675 - 17369734
Alignment:
Q  121 tggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagttat 180  Q
    |||||||||||| ||||||| |||||||| |||||||||||||| |||||||||||||||    
T  17369675 tggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaattagttat 17369734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 181
Target Start/End: Complemental strand, 6935284 - 6935217
Alignment:
Q  114 tgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagttata 181  Q
    |||||| |||||||||||| ||||||| ||| |||| ||||||||| |||| ||||||||||||||||    
T  6935284 tgttatttggcaaatgaaggaatttggagttcaagaatcttggactaaattccttaaaattagttata 6935217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 181
Target Start/End: Complemental strand, 6943037 - 6942966
Alignment:
Q  110 attttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagttata 181  Q
    |||||||||| | |||||||||| ||||||| |||||||| |||| ||| ||||| ||||||||||| ||||    
T  6943037 attttgttatttagcaaatgaaggaatttggagttgaagaatcttagacgcaattccttaaaattagatata 6942966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 159
Target Start/End: Complemental strand, 19746769 - 19746715
Alignment:
Q  105 aactgattttgttatatggcaaatgaagaaatttggggttgaagattcttggact 159  Q
    |||||| ||||||||||||||||||||||| ||||| ||| |||| |||||||||    
T  19746769 aactgaatttgttatatggcaaatgaagaagtttggagttcaagagtcttggact 19746715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 174
Target Start/End: Complemental strand, 24950214 - 24950150
Alignment:
Q  110 attttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaatt 174  Q
    |||||||||||||| | |||| ||| ||||| ||||| || ||||||| |||||| |||||||||    
T  24950214 attttgttatatggaagatgatgaagtttggagttgaggagtcttggagtcaattccttaaaatt 24950150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 1e-16; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 113 - 181
Target Start/End: Original strand, 14514903 - 14514971
Alignment:
Q  113 ttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagttata 181  Q
    ||||||||||| ||||| |  ||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  14514903 ttgttatatggaaaatggatgaatttggagttgaagattcttggactcaattccttaaaattagttata 14514971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 176
Target Start/End: Original strand, 20975558 - 20975624
Alignment:
Q  110 attttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattag 176  Q
    ||||||||||||||||||||| | ||||||| |||||||||||||||| ||||||| ||||| ||||    
T  20975558 attttgttatatggcaaatgagggaatttggagttgaagattcttggattcaattgtttaaatttag 20975624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 180
Target Start/End: Original strand, 554482 - 554546
Alignment:
Q  116 ttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagttat 180  Q
    |||||||||||||||   ||| ||| ||| |||| |||||||||||||| |||||||||||||||    
T  554482 ttatatggcaaatgatagaatatggagttaaagagtcttggactcaattacttaaaattagttat 554546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 178
Target Start/End: Complemental strand, 18908879 - 18908811
Alignment:
Q  110 attttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagtt 178  Q
    |||||||||||||| | |||| | ||||||| ||| |||| |||||||||||||| || ||||||||||    
T  18908879 attttgttatatggaagatgatggaatttggagttcaagagtcttggactcaattcctcaaaattagtt 18908811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 178
Target Start/End: Complemental strand, 18913627 - 18913559
Alignment:
Q  110 attttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagtt 178  Q
    |||||||||||||| | |||| | ||||||| ||| |||| |||||||||||||| || ||||||||||    
T  18913627 attttgttatatggaagatgatggaatttggagttcaagagtcttggactcaattcctcaaaattagtt 18913559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 178
Target Start/End: Complemental strand, 18920835 - 18920767
Alignment:
Q  110 attttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagtt 178  Q
    |||||||||||||| | |||| | ||||||| ||| |||| |||||||||||||| || ||||||||||    
T  18920835 attttgttatatggaagatgatggaatttggagttcaagagtcttggactcaattcctcaaaattagtt 18920767  T

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Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 25698507 - 25698562
Alignment:
Q  110 attttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattg 165  Q
    |||||||||||||||||||||   ||||||| |||||||| ||||||||| |||||    
T  25698507 attttgttatatggcaaatgagagaatttggagttgaagactcttggactaaattg 25698562  T

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Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 159
Target Start/End: Original strand, 20967699 - 20967749
Alignment:
Q  109 gattttgttatatggcaaatgaagaaatttggggttgaagattcttggact 159  Q
    |||||||||||||||||||||| ||||||| | | |||||| |||||||||    
T  20967699 gattttgttatatggcaaatgacgaaatttagagctgaagagtcttggact 20967749  T

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Target: scaffold0867 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0867
Description:

Target: scaffold0867; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 104 - 180
Target Start/End: Complemental strand, 4745 - 4669
Alignment:
Q  104 aaactgattttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagttat 180  Q
    ||||| ||||| ||||||||||||||||||||||||| ||| |||| ||||||||||| ||  | ||||||||||||    
T  4745 aaactcattttattatatggcaaatgaagaaatttggagttcaagagtcttggactcagttattcaaaattagttat 4669  T

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Target: scaffold0649 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0649
Description:

Target: scaffold0649; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 180
Target Start/End: Original strand, 5430 - 5508
Alignment:
Q  102 ggaaactgattttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagttat 180  Q
    ||||| |||||||||||||||||| ||||| |||||| | |||||||| |||||||||   || |||||| ||||||||    
T  5430 ggaaaatgattttgttatatggcagatgaaaaaatttagagttgaagagtcttggactatgttccttaaatttagttat 5508  T

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Target: chr8 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 180
Target Start/End: Original strand, 27618485 - 27618561
Alignment:
Q  104 aaactgattttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagttat 180  Q
    ||||| |||||||||||||| ||||| |  || | || |||||||| ||||||||||| ||||||||| ||||||||    
T  27618485 aaactcattttgttatatggaaaatggaagaactcggagttgaagagtcttggactcagttgcttaaagttagttat 27618561  T

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Target: chr8; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 180
Target Start/End: Original strand, 29390288 - 29390356
Alignment:
Q  112 tttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagttat 180  Q
    |||||||||||||| |||| | ||||||| |||||||| ||||| ||| ||||| || || ||||||||    
T  29390288 tttgttatatggcagatgagggaatttggagttgaagaatcttgaactaaattgtttcaatttagttat 29390356  T

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Target: scaffold0354 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0354
Description:

Target: scaffold0354; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 176
Target Start/End: Original strand, 7471 - 7529
Alignment:
Q  118 atatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattag 176  Q
    ||||||||||||||| ||||||| ||||| || ||||||  |||||| |||||||||||    
T  7471 atatggcaaatgaaggaatttggagttgatgagtcttgggttcaattccttaaaattag 7529  T

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