View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19376_high_2 (Length: 420)
Name: NF19376_high_2
Description: NF19376
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19376_high_2 |
 |  |
|
Alignment Details
Target: chr4 (Bit Score: 372; Significance: 0; HSPs: 20)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 372; E-Value: 0
Query Start/End: Original strand, 10 - 413
Target Start/End: Complemental strand, 2621431 - 2621028
Alignment:
| Q |
10 |
tttggagaaagctcgcaacccatctgtaggaatattgctatagcaatggaagaaagtaagcgatttgatgtctacagggaaagtggatatattagtaaga |
109 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2621431 |
tttggagaaagctcgcaacccatctgtaggaatattgctatagcaatggaagaaagtaagcgatttgatgtctacagggaaagtggatatattagtaaga |
2621332 |
T |
 |
| Q |
110 |
agctcgtcgaggtcactttctgtagagaagcccgtgatgttgagggatgtgatattagggaacctgtcgaagaggcgaggaatgaaagggatggttttat |
209 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2621331 |
agctcgtcgaggtcactttctgtagagaagcccgtgatgttgagggatgtgatattagggaacctgtcgaagaggcgaggaatgaaagggatggttttat |
2621232 |
T |
 |
| Q |
210 |
cggagattgtgatggagaaccgtagacggttggtgatggacaaaaactgtttggacacgagggagagaggttccaagtaatggttgttgtcgccgtcgtc |
309 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||| |
|
|
| T |
2621231 |
cggagattgtgatggagaaccgtagacggttggtgatggacaaaaactgtttggatacgagggagagaggttcccagtaatggttgttgtcgccatcgtc |
2621132 |
T |
 |
| Q |
310 |
aactaacttgaagatacactcccaccactcctctggtaagaatgaacatgtttccgccattgtttttggaatattgaatgtcaatgattatgataatgat |
409 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| | ||||| |||||| |
|
|
| T |
2621131 |
aactaacttgaagatacactcccaccactcctctggtaagaatgaacatgtttccgccattgtttgtggaatattggatgtcaataactatgacaatgat |
2621032 |
T |
 |
| Q |
410 |
gatg |
413 |
Q |
| |
|
|||| |
|
|
| T |
2621031 |
gatg |
2621028 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 151 - 308
Target Start/End: Complemental strand, 2367805 - 2367648
Alignment:
| Q |
151 |
gagggatgtgatattagggaacctgtcgaagaggcgaggaatgaaagggatggttttatcggagattgtgatggagaaccgtagacggttggtgatggac |
250 |
Q |
| |
|
||||||||||| || |||||||| | ||| |||||| || ||||||||| ||||||||||| |||| |||||||| || ||||||||||||||||| |
|
|
| T |
2367805 |
gagggatgtgaggttggggaacctttggaaaaggcgataaaggaaagggattgttttatcggacattgctatggagaatcggagacggttggtgatggag |
2367706 |
T |
 |
| Q |
251 |
aaaaactgtttggacacgagggagagaggttccaagtaatggttgttgtcgccgtcgt |
308 |
Q |
| |
|
| ||| |||||||| |||| ||| |||||||||||||| |||||||||||| ||||| |
|
|
| T |
2367705 |
agaaattgtttggagacgatggaaagaggttccaagtagcggttgttgtcgctgtcgt |
2367648 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 143 - 278
Target Start/End: Original strand, 2486229 - 2486364
Alignment:
| Q |
143 |
gtgatgttgagggatgtgatattagggaacctgtcgaagaggcgaggaatgaaagggatggttttatcggagattgtgatggagaaccgtagacggttgg |
242 |
Q |
| |
|
||||| ||| ||||||| | ||||||||||| | ||||| ||| ||| ||||||||| ||||| ||||||||||||| ||||| || |||||||||| |
|
|
| T |
2486229 |
gtgatattgtgggatgtaacattagggaacccataaaagagacgatgaaggaaagggattgttttctcggagattgtgaccgagaatcggagacggttgg |
2486328 |
T |
 |
| Q |
243 |
tgatggacaaaaactgtttggacacgagggagagag |
278 |
Q |
| |
|
||||||||| ||||||||| || ||||||||||||| |
|
|
| T |
2486329 |
tgatggacagaaactgttttgagacgagggagagag |
2486364 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 166 - 261
Target Start/End: Complemental strand, 5106428 - 5106333
Alignment:
| Q |
166 |
agggaacctgtcgaagaggcgaggaatgaaagggatggttttatcggagattgtgatggagaaccgtagacggttggtgatggacaaaaactgttt |
261 |
Q |
| |
|
||||||||| | |||||||||| |||||||||||||||||| || | |||||||| ||||| || |||||||||||||||||||||||||||| |
|
|
| T |
5106428 |
agggaaccttttgaagaggcgatgaatgaaagggatggtttgattagtgattgtgaccgagaatcgaggacggttggtgatggacaaaaactgttt |
5106333 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 143 - 261
Target Start/End: Complemental strand, 5102224 - 5102106
Alignment:
| Q |
143 |
gtgatgttgagggatgtgatattagggaacctgtcgaagaggcgaggaatgaaagggatggttttatcggagattgtgatggagaaccgtagacggttgg |
242 |
Q |
| |
|
||||||||||| ||||||| ||||||||||| ||||| ||| |||||||||||||||||||| ||| | |||||||| ||||| || |||| || | |
|
|
| T |
5102224 |
gtgatgttgagtgatgtgacgttagggaacctttcgaaaaggagaggaatgaaagggatggttcgatcagtgattgtgaccgagaatcgaagactattag |
5102125 |
T |
 |
| Q |
243 |
tgatggacaaaaactgttt |
261 |
Q |
| |
|
|||| |||||||||||||| |
|
|
| T |
5102124 |
tgatagacaaaaactgttt |
5102106 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 155 - 276
Target Start/End: Original strand, 2547466 - 2547587
Alignment:
| Q |
155 |
gatgtgatattagggaacctgtcgaagaggcgaggaatgaaagggatggttttatcggagattgtgatggagaaccgtagacggttggtgatggacaaaa |
254 |
Q |
| |
|
|||||||| ||||||||||| | ||||| | |||||| | || ||||| | | | ||||||||||| |||||||| ||||||||||||||||||| || |
|
|
| T |
2547466 |
gatgtgatgttagggaacctttggaagaagtgaggaagggaaaggatgatatgactggagattgtgactgagaaccggagacggttggtgatggacagaa |
2547565 |
T |
 |
| Q |
255 |
actgtttggacacgagggagag |
276 |
Q |
| |
|
|||||||||| |||| |||||| |
|
|
| T |
2547566 |
actgtttggagacgatggagag |
2547587 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 167 - 288
Target Start/End: Original strand, 12124770 - 12124891
Alignment:
| Q |
167 |
gggaacctgtcgaagaggcgaggaatgaaagggatggttttatcggagattgtgatggagaaccgtagacggttggtgatggacaaaaactgtttggaca |
266 |
Q |
| |
|
|||||||| | ||||||||| || ||||||||| |||| ||| ||||||| |||||| || | ||||||||||||||||| | ||| |||||||| | |
|
|
| T |
12124770 |
gggaacctttggaagaggcggtcaaggaaagggattgtttcatcagagattgcgatggaaaattggagacggttggtgatggagagaaattgtttggaga |
12124869 |
T |
 |
| Q |
267 |
cgagggagagaggttccaagta |
288 |
Q |
| |
|
| | |||||||||||||||||| |
|
|
| T |
12124870 |
caatggagagaggttccaagta |
12124891 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 164 - 264
Target Start/End: Original strand, 2472035 - 2472135
Alignment:
| Q |
164 |
ttagggaacctgtcgaagaggcgaggaatgaaagggatggttttatcggagattgtgatggagaaccgtagacggttggtgatggacaaaaactgtttgg |
263 |
Q |
| |
|
||||||||||| ||||||||| || ||| ||||||||| |||| | | ||||||||| |||||| | ||||| ||||||||||| ||||||||||||| |
|
|
| T |
2472035 |
ttagggaacctttcgaagaggtgatgaaggaaagggattgtttcacagtagattgtgagggagaatcagagacgattggtgatggagaaaaactgtttgg |
2472134 |
T |
 |
| Q |
264 |
a |
264 |
Q |
| |
|
| |
|
|
| T |
2472135 |
a |
2472135 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 155 - 278
Target Start/End: Original strand, 2491062 - 2491185
Alignment:
| Q |
155 |
gatgtgatattagggaacctgtcgaagaggcgaggaatgaaagggatggttttatcggagattgtgatggagaaccgtagacggttggtgatggacaaaa |
254 |
Q |
| |
|
||||| || ||||||||||| || ||||| ||| || ||||||||| ||| |||||||||||||| || || || |||||||| |||||||||| || |
|
|
| T |
2491062 |
gatgtaatgttagggaacctttcaaagagacgattaaggaaagggattgttgcatcggagattgtgaccgaaaatcggagacggtttgtgatggacagaa |
2491161 |
T |
 |
| Q |
255 |
actgtttggacacgagggagagag |
278 |
Q |
| |
|
||||||| || ||||| ||||||| |
|
|
| T |
2491162 |
actgttttgagacgagtgagagag |
2491185 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 143 - 261
Target Start/End: Original strand, 2519155 - 2519273
Alignment:
| Q |
143 |
gtgatgttgagggatgtgatattagggaacctgtcgaagaggcgaggaatgaaagggatggttttatcggagattgtgatggagaaccgtagacggttgg |
242 |
Q |
| |
|
||||||||||| ||||| | || |||||||| || ||||| ||| ||| ||||||||| |||| ||| |||||||||| ||| | || | |||||||| |
|
|
| T |
2519155 |
gtgatgttgagtgatgtaacgttggggaacctatcaaagagacgatgaaggaaagggattgtttgatctgagattgtgactgaggatcgaaaacggttgg |
2519254 |
T |
 |
| Q |
243 |
tgatggacaaaaactgttt |
261 |
Q |
| |
|
||||||||| ||||||||| |
|
|
| T |
2519255 |
tgatggacagaaactgttt |
2519273 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 204
Target Start/End: Complemental strand, 2382623 - 2382562
Alignment:
| Q |
143 |
gtgatgttgagggatgtgatattagggaacctgtcgaagaggcgaggaatgaaagggatggt |
204 |
Q |
| |
|
||||| ||||||||||||| |||||||| ||| ||||||||||||||||||||||||||| |
|
|
| T |
2382623 |
gtgatattgagggatgtgacattagggagccttcggaagaggcgaggaatgaaagggatggt |
2382562 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 143 - 278
Target Start/End: Original strand, 2525679 - 2525814
Alignment:
| Q |
143 |
gtgatgttgagggatgtgatattagggaacctgtcgaagaggcgaggaatgaaagggatggttttatcggagattgtgatggagaaccgtagacggttgg |
242 |
Q |
| |
|
||||| ||||| |||| || ||||||||||| || ||||| ||| || |||||||| ||| || ||||||||||| |||| || |||| ||||| |
|
|
| T |
2525679 |
gtgatattgagtgatgcaatgttagggaacctttcaaagagacgattaagaaaagggatagttgcattggagattgtgaccaagaatcgaagactgttgg |
2525778 |
T |
 |
| Q |
243 |
tgatggacaaaaactgtttggacacgagggagagag |
278 |
Q |
| |
|
||||||||| ||||||||| || ||||||||||||| |
|
|
| T |
2525779 |
tgatggacagaaactgttttgagacgagggagagag |
2525814 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 308
Target Start/End: Complemental strand, 2373352 - 2373212
Alignment:
| Q |
167 |
gggaacctgtcgaagaggcgaggaatgaaagggatggttttatcggagattgtgatggagaaccgtagacggttggtgatggacaaaaactgtttggaca |
266 |
Q |
| |
|
|||||||| | |||||||||| || |||||| || ||||||||| | |||| |||||||| || ||| | ||||||||||| | ||| |||||||| | |
|
|
| T |
2373352 |
gggaacctttggaagaggcgattaaggaaaggaattgttttatcg-acattgctatggagaatcggagatgattggtgatggagagaaattgtttggaaa |
2373254 |
T |
 |
| Q |
267 |
cgagggagagaggttccaagtaatggttgttgtcgccgtcgt |
308 |
Q |
| |
|
| | |||||||||||| ||||| || |||||| |||||||| |
|
|
| T |
2373253 |
caacggagagaggttcgaagtagcggctgttgttgccgtcgt |
2373212 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 68 - 257
Target Start/End: Original strand, 2477421 - 2477604
Alignment:
| Q |
68 |
agcgatttgatgtctacagggaaagtggatatattagtaagaagctcgtcgaggtcactttctgtagagaagcccgtgatgttgagggatgtgatattag |
167 |
Q |
| |
|
|||||| ||| ||||| || ||||||||||| | ||||||||||| || |||||||||||| | |||| |||||||| |||||||||| |||| |
|
|
| T |
2477421 |
agcgatctgaggtctatagctaaagtggatatttgggtaagaagctcatcaaggtcactttctct-gaga-----gtgatgtttagggatgtgacgttag |
2477514 |
T |
 |
| Q |
168 |
ggaacctgtcgaagaggcgaggaatgaaagggatggttttatcggagattgtgatggagaaccgtagacggttggtgatggacaaaaact |
257 |
Q |
| |
|
||||||| | ||||| || ||| | |||||||||||| |||||| ||||| | ||||| || |||| |||||| ||||||| ||||| |
|
|
| T |
2477515 |
ggaacctttgaaagagaggatgaagggaagggatggtttgatcggaaattgtcacagagaatcgaagactgttggttatggacagaaact |
2477604 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 249
Target Start/End: Complemental strand, 2391136 - 2391036
Alignment:
| Q |
149 |
ttgagggatgtgatattagggaacctgtcgaagaggcgaggaatgaaagggatggttttatcggagattgtgatggagaaccgtagacggttggtgatgg |
248 |
Q |
| |
|
||||||||||||| ||||| ||||| | ||||| ||||||||||||||||||||| | || |||| |||||||||| || ||| ||||||||||| |
|
|
| T |
2391136 |
ttgagggatgtgacattagagaaccgttggaagatttgaggaatgaaagggatggtttgttgggtgattttgatggagaatcggagattgttggtgatgg |
2391037 |
T |
 |
| Q |
249 |
a |
249 |
Q |
| |
|
| |
|
|
| T |
2391036 |
a |
2391036 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 278
Target Start/End: Original strand, 2467316 - 2467587
Alignment:
| Q |
1 |
tttcgtctctttggagaaagctcgcaacccatctgtaggaatattgctatagcaatggaagaaagtaagcgatttgatgtctacagggaaagtggatata |
100 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| ||||| | ||| | ||| ||| ||| || ||||||| ||| | |||||||||||| || |
|
|
| T |
2467316 |
tttcatctctttggagaaagctcgcaacccatctgcaggaaccgt--tatgggg-tggtagagagtgagggatttgaggtccaaagggaaagtggagatt |
2467412 |
T |
 |
| Q |
101 |
ttagtaagaagctcgtcgaggtcactttctgtagagaagcccgtgatgttgagggatgtgatattagggaacctgtcgaagaggcgaggaatgaaaggga |
200 |
Q |
| |
|
|| |||||||| ||| ||||||||||||| |||| ||||||| | ||| ||||||| |||||||| || ||||| ||| ||| ||||||| |
|
|
| T |
2467413 |
ttggtaagaagtgcgttgaggtcactttctaccgagaga---gtgatgtcaattgatctgatattggggaacctttcaaagagacgatgaagtaaaggga |
2467509 |
T |
 |
| Q |
201 |
tggttttatcggagattgtgatggagaaccgtagacggttggtgatggacaaaaactgtttggacacgagggagagag |
278 |
Q |
| |
|
| ||| ||||| || | || |||||| || |||| |||||| ||||||||||||||||| || |||| |||||||| |
|
|
| T |
2467510 |
ttgttccgtcggaaatcgagacggagaatcgaagactgttggtaatggacaaaaactgttttgagacgacggagagag |
2467587 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 71 - 130
Target Start/End: Original strand, 2486145 - 2486204
Alignment:
| Q |
71 |
gatttgatgtctacagggaaagtggatatattagtaagaagctcgtcgaggtcactttct |
130 |
Q |
| |
|
||||||| ||| | |||||||||||| |||| |||||||||||| |||||||||||||| |
|
|
| T |
2486145 |
gatttgaggtccaaagggaaagtggagatatgtgtaagaagctcgccgaggtcactttct |
2486204 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 143 - 278
Target Start/End: Original strand, 5035544 - 5035679
Alignment:
| Q |
143 |
gtgatgttgagggatgtgatattagggaacctgtcgaagaggcgaggaatgaaagggatggttttatcggagattgtgatggagaaccgtagacggttgg |
242 |
Q |
| |
|
||||| ||||| ||||| |||||||||||||| || ||||| ||| || ||||||||| ||| || |||||| ||| |||| || |||||||||| |
|
|
| T |
5035544 |
gtgatattgagtgatgtaatattagggaacctttcaaagagacgactaaggaaagggattgttgcctcagagattttgaccaagaatcgaagacggttgg |
5035643 |
T |
 |
| Q |
243 |
tgatggacaaaaactgtttggacacgagggagagag |
278 |
Q |
| |
|
||||||| | ||||||||| || |||| ||| |||| |
|
|
| T |
5035644 |
tgatggagagaaactgttttgaaacgaaggaaagag |
5035679 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 275
Target Start/End: Complemental strand, 1517071 - 1517029
Alignment:
| Q |
233 |
agacggttggtgatggacaaaaactgtttggacacgagggaga |
275 |
Q |
| |
|
|||||||||||||||||||| || |||||||| |||||||||| |
|
|
| T |
1517071 |
agacggttggtgatggacaagaattgtttggaaacgagggaga |
1517029 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 281
Target Start/End: Original strand, 12126852 - 12126940
Alignment:
| Q |
193 |
gaaagggatggttttatcggagattgtgatggagaaccgtagacggttggtgatggacaaaaactgtttggacacgagggagagaggtt |
281 |
Q |
| |
|
||||||||| ||| ||| |||| || ||||||||| | ||||||||||||||||| | ||| |||||||| || | ||||||||||| |
|
|
| T |
12126852 |
gaaagggattttttcatctgagactgcgatggagaataggagacggttggtgatggagagaaattgtttggagacaatggagagaggtt |
12126940 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 164 - 261
Target Start/End: Complemental strand, 2576512 - 2576415
Alignment:
| Q |
164 |
ttagggaacctgtcgaagaggcgaggaatgaaagggatggttttatcggagattgtgatggagaaccgtagacggttggtgatggacaaaaactgttt |
261 |
Q |
| |
|
||||||| ||| |||||||||||| |||||||||||||||| ||||| |||||||| ||||| || ||||| ||||||||||| ||||||||||| |
|
|
| T |
2576512 |
ttagggatcctttcgaagaggcgacaaatgaaagggatggttcaatcggtgattgtgaccgagaatcgaagacgattggtgatggataaaaactgttt |
2576415 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 164 - 264
Target Start/End: Complemental strand, 15838079 - 15837979
Alignment:
| Q |
164 |
ttagggaacctgtcgaagaggcgaggaatgaaagggatggttttatcggagattgtgatggagaaccgtagacggttggtgatggacaaaaactgtttgg |
263 |
Q |
| |
|
||||||||||| | ||||||| ||||||||||||||| |||| ||| |||| ||| |||||| || ||||||||||||||||| | ||||||||||| |
|
|
| T |
15838079 |
ttagggaacctttggaagaggttaggaatgaaagggattgtttgatctatgattttgagggagaatcggagacggttggtgatggagagaaactgtttgg |
15837980 |
T |
 |
| Q |
264 |
a |
264 |
Q |
| |
|
| |
|
|
| T |
15837979 |
a |
15837979 |
T |
 |
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Target: chr5 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 289
Target Start/End: Original strand, 12846948 - 12847004
Alignment:
| Q |
233 |
agacggttggtgatggacaaaaactgtttggacacgagggagagaggttccaagtaa |
289 |
Q |
| |
|
||||||||||||||||| | ||||| ||||| |||||||||||| ||||||||||| |
|
|
| T |
12846948 |
agacggttggtgatggagaggaactgcttggaaacgagggagagatgttccaagtaa |
12847004 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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