View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19377_high_7 (Length: 247)
Name: NF19377_high_7
Description: NF19377
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19377_high_7 |
 | |
|
| [»] scaffold0288 (1 HSPs) |
| | |
|
| [»] scaffold0477 (1 HSPs) |
| | |
|
| [»] scaffold0184 (1 HSPs) |
| | |
|
Alignment Details
Target: chr8 (Bit Score: 219; Significance: 1e-120; HSPs: 15)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 1968981 - 1969226
Alignment:
| Q |
1 |
ccgagtagcagttcatctagtgcaggatatctttcagcagaaaatgacattgacactttgcagtttttaccatct------gggttcttggagagaacca |
94 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
1968981 |
ccgagtagcagttcatctagtgcaggatatctttcagcagaaaatgatattgacactttgcagtttttaccatctggatctgggttcttggagagaacca |
1969080 |
T |
|
| Q |
95 |
aggagaaaggttttgttattacatcatgggcgccgcagattcaaatcctaagtcacaactcaattggtggattcttgactcattgtggctggaattcaac |
194 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1969081 |
aggagaaaggttttgttattacatcatgggcgccgcagattcaaatcctaagtcacaactcaattggtggattcttgactcattgtggctggaattcaac |
1969180 |
T |
|
| Q |
195 |
ccttgagagtgtgttgcatggtgtgccactaatcacatggcctttg |
240 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1969181 |
ccttgagagtgtgttgcatggtgtgccactaatcacatggcctttg |
1969226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 2008034 - 2007798
Alignment:
| Q |
1 |
ccgagtagcagttcatctagtgcaggatatctttcagcagaaaatgacattgacactttgcagtttttaccatctgggttcttggagagaaccaaggaga |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2008034 |
ccgagtagcagttcatctagtgcaggatatctttcagcagaaaatgatattgacactttgcagtttttaccatctgggttcttggagagaaccaaggaga |
2007935 |
T |
|
| Q |
101 |
aaggttttgttattacatcatgggcgccgcagattcaaatcctaagtcacaactcaattggtggattcttgactcattgtggctggaattcaacccttga |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||||| |
|
|
| T |
2007934 |
aaggttttgttattacatcatgggcgccgcagattcaaatcctaagtcacaactcagttggtgggttcttgacgcattgtggctggaattcaacccttga |
2007835 |
T |
|
| Q |
201 |
gagtgtgttgcatggtgtgccactaatcacatggcct |
237 |
Q |
| |
|
||||||| |||| |||||||| ||||||| |||||| |
|
|
| T |
2007834 |
gagtgtggtgcacggtgtgccgttaatcacgtggcct |
2007798 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 4 - 237
Target Start/End: Complemental strand, 2004651 - 2004418
Alignment:
| Q |
4 |
agtagcagttcatctagtgcaggatatctttcagcagaaaatgacattgacactttgcagtttttaccatctgggttcttggagagaaccaaggagaaag |
103 |
Q |
| |
|
||||| ||||||||||||||||||||| |||||||| ||||||| |||||||| ||||||||| ||||| |||||||||||||||||||||||||||| |
|
|
| T |
2004651 |
agtagtagttcatctagtgcaggatatttttcagcacaaaatgatgctgacacttggcagtttttgccatccgggttcttggagagaaccaaggagaaag |
2004552 |
T |
|
| Q |
104 |
gttttgttattacatcatgggcgccgcagattcaaatcctaagtcacaactcaattggtggattcttgactcattgtggctggaattcaacccttgagag |
203 |
Q |
| |
|
||||||| ||||||||||||| ||||||||||||||||||||||||||||||| | || || |||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
2004551 |
gttttgtcattacatcatgggtgccgcagattcaaatcctaagtcacaactcagtcggcgggttcttgactcattgtggctggaattcaaccctagagag |
2004452 |
T |
|
| Q |
204 |
tgtgttgcatggtgtgccactaatcacatggcct |
237 |
Q |
| |
|
|||| ||||||||||||||||||| ||||||||| |
|
|
| T |
2004451 |
tgtggtgcatggtgtgccactaataacatggcct |
2004418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 4 - 237
Target Start/End: Original strand, 1965048 - 1965281
Alignment:
| Q |
4 |
agtagcagttcatctagtgcaggatatctttcagcagaaaatgacattgacactttgcagtttttaccatctgggttcttggagagaaccaaggagaaag |
103 |
Q |
| |
|
||||| |||||||||||||||| ||||||||||||| |||||||| |||| ||||| | ||||||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
1965048 |
agtagtagttcatctagtgcagcatatctttcagcacaaaatgacggtgaccctttgaaatttttaccatctgggtttttggagagaacgaaggagaaag |
1965147 |
T |
|
| Q |
104 |
gttttgttattacatcatgggcgccgcagattcaaatcctaagtcacaactcaattggtggattcttgactcattgtggctggaattcaacccttgagag |
203 |
Q |
| |
|
||||||| |||||||||||||| || |||||||||||||| ||||| | |||||||| || ||||||| ||| ||||| ||||| ||||||||||| || |
|
|
| T |
1965148 |
gttttgtcattacatcatgggcacctcagattcaaatccttagtcatagttcaattggagggttcttgagtcactgtggttggaactcaacccttgaaag |
1965247 |
T |
|
| Q |
204 |
tgtgttgcatggtgtgccactaatcacatggcct |
237 |
Q |
| |
|
|||| ||||||| ||||||||||||||||||||| |
|
|
| T |
1965248 |
tgtggtgcatggagtgccactaatcacatggcct |
1965281 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 32 - 237
Target Start/End: Original strand, 2436818 - 2437023
Alignment:
| Q |
32 |
tttcagcagaaaatgacattgacactttgcagtttttaccatctgggttcttggagagaaccaaggagaaaggttttgttattacatcatgggcgccgca |
131 |
Q |
| |
|
|||||||| ||||||| ||||| ||||||| |||||||||| ||||||| | |||||||||||||| |||| | |||||| |||||||||| || || |
|
|
| T |
2436818 |
tttcagcacaaaatgatgttgaccctttgcaatttttaccatgtgggttcatagagagaaccaaggatcaagggatggttattccatcatgggcaccaca |
2436917 |
T |
|
| Q |
132 |
gattcaaatcctaagtcacaactcaattggtggattcttgactcattgtggctggaattcaacccttgagagtgtgttgcatggtgtgccactaatcaca |
231 |
Q |
| |
|
| |||||||||| ||||||| ||| ||||||| ||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
2436918 |
ggttcaaatccttagtcacagatcagttggtggtttcttgagtcactgtggctggaattcaacccttgagagtgtggtgcatggtgtgccactaatcaca |
2437017 |
T |
|
| Q |
232 |
tggcct |
237 |
Q |
| |
|
|||||| |
|
|
| T |
2437018 |
tggcct |
2437023 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 4 - 237
Target Start/End: Complemental strand, 2011646 - 2011413
Alignment:
| Q |
4 |
agtagcagttcatctagtgcaggatatctttcagcagaaaatgacattgacactttgcagtttttaccatctgggttcttggagagaaccaaggagaaag |
103 |
Q |
| |
|
||||| |||||||||| ||||| ||||||||||||| ||||||| |||| |||| || ||||||||||||||||| |||||||||||||| ||| ||| |
|
|
| T |
2011646 |
agtagtagttcatctaatgcagcatatctttcagcacaaaatgatgttgatgctttacaatttttaccatctgggtttttggagagaaccaaagaggaag |
2011547 |
T |
|
| Q |
104 |
gttttgttattacatcatgggcgccgcagattcaaatcctaagtcacaactcaattggtggattcttgactcattgtggctggaattcaacccttgagag |
203 |
Q |
| |
|
||||||| |||||||||||||| || |||||||||||||| ||||| | ||| |||| || ||||||| ||| ||||| |||| ||||| ||||| || |
|
|
| T |
2011546 |
gttttgtcattacatcatgggcacctcagattcaaatccttagtcatagttcagttggcgggttcttgagtcactgtggttggagctcaacacttgaaag |
2011447 |
T |
|
| Q |
204 |
tgtgttgcatggtgtgccactaatcacatggcct |
237 |
Q |
| |
|
|||| | ||||| ||||||||||||||||||||| |
|
|
| T |
2011446 |
tgtggttcatggggtgccactaatcacatggcct |
2011413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 56 - 237
Target Start/End: Original strand, 1963430 - 1963611
Alignment:
| Q |
56 |
ctttgcagtttttaccatctgggttcttggagagaaccaaggagaaaggttttgttattacatcatgggcgccgcagattcaaatcctaagtcacaactc |
155 |
Q |
| |
|
|||| |||||||||||||||||||| ||||||||||||||||| |||| | ||| || |||||||||| || |||||||||||||| ||||||| || |
|
|
| T |
1963430 |
ctttacagtttttaccatctgggtttttggagagaaccaaggaacaagggatggttgttccatcatgggcaccacagattcaaatccttagtcacagttc |
1963529 |
T |
|
| Q |
156 |
aattggtggattcttgactcattgtggctggaattcaacccttgagagtgtgttgcatggtgtgccactaatcacatggcct |
237 |
Q |
| |
|
|||||||| || ||| |||||||||| |||||||||||||||||||||||| || ||||||||||||||||||| |||||| |
|
|
| T |
1963530 |
cattggtgggtttttgtctcattgtggttggaattcaacccttgagagtgtggtgtatggtgtgccactaatcacttggcct |
1963611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 50 - 237
Target Start/End: Complemental strand, 2015005 - 2014818
Alignment:
| Q |
50 |
ttgacactttgcagtttttaccatctgggttcttggagagaaccaaggagaaaggttttgttattacatcatgggcgccgcagattcaaatcctaagtca |
149 |
Q |
| |
|
||||| |||| || |||||||| || ||||||||||||||||| ||||| |||| | |||||| |||||||||| || |||||||||||||| |||| |
|
|
| T |
2015005 |
ttgaccctttacaatttttaccttcagggttcttggagagaacaaaggaacaagggatggttattccatcatgggcaccacagattcaaatccttcgtca |
2014906 |
T |
|
| Q |
150 |
caactcaattggtggattcttgactcattgtggctggaattcaacccttgagagtgtgttgcatggtgtgccactaatcacatggcct |
237 |
Q |
| |
|
|| ||| ||||||| ||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2014905 |
cagttcagttggtgggttcttgactcactgtggttggaattcaatgcttgagagtgtgttgcatggtgtgccactaatcacatggcct |
2014818 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 50 - 237
Target Start/End: Complemental strand, 2018388 - 2018201
Alignment:
| Q |
50 |
ttgacactttgcagtttttaccatctgggttcttggagagaaccaaggagaaaggttttgttattacatcatgggcgccgcagattcaaatcctaagtca |
149 |
Q |
| |
|
||||| |||| || |||||||| || |||||||||||||||| ||||| |||| | |||||| |||||||||| || |||||||||||||| |||| |
|
|
| T |
2018388 |
ttgaccctttacaatttttaccttcagggttcttggagagaaaaaaggaacaagggatggttattccatcatgggcaccacagattcaaatccttcgtca |
2018289 |
T |
|
| Q |
150 |
caactcaattggtggattcttgactcattgtggctggaattcaacccttgagagtgtgttgcatggtgtgccactaatcacatggcct |
237 |
Q |
| |
|
|| ||| ||||||| ||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2018288 |
cagttcagttggtgggttcttgactcactgtggttggaattcaacgcttgagagtgtgttgcatggtgtgccactaatcacatggcct |
2018201 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 204
Target Start/End: Complemental strand, 3770260 - 3770193
Alignment:
| Q |
137 |
aaatcctaagtcacaactcaattggtggattcttgactcattgtggctggaattcaacccttgagagt |
204 |
Q |
| |
|
|||||||||||||||| |||| |||||||| || || |||||||| ||||||||||| ||||||||| |
|
|
| T |
3770260 |
aaatcctaagtcacaattcaacaggtggatttttaacacattgtggttggaattcaacacttgagagt |
3770193 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 221
Target Start/End: Complemental strand, 10201937 - 10201869
Alignment:
| Q |
153 |
ctcaattggtggattcttgactcattgtggctggaattcaacccttgagagtgtgttgcatggtgtgcc |
221 |
Q |
| |
|
||||||||| || || ||| ||||||||| ||||||||||| |||||||||||| || |||||||||| |
|
|
| T |
10201937 |
ctcaattggagggtttgtgagtcattgtggttggaattcaactcttgagagtgtggtgaatggtgtgcc |
10201869 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 221
Target Start/End: Complemental strand, 10209010 - 10208942
Alignment:
| Q |
153 |
ctcaattggtggattcttgactcattgtggctggaattcaacccttgagagtgtgttgcatggtgtgcc |
221 |
Q |
| |
|
||||||||| || || ||| ||||||||| ||||||||||| |||||||||||| || |||||||||| |
|
|
| T |
10209010 |
ctcaattggagggtttgtgagtcattgtggttggaattcaactcttgagagtgtggtgaatggtgtgcc |
10208942 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 204
Target Start/End: Original strand, 3707935 - 3708002
Alignment:
| Q |
137 |
aaatcctaagtcacaactcaattggtggattcttgactcattgtggctggaattcaacccttgagagt |
204 |
Q |
| |
|
|||||||||||||||| |||| |||||||| || || |||||||| |||||||| || ||||||||| |
|
|
| T |
3707935 |
aaatcctaagtcacaattcaacaggtggatttttaacacattgtggttggaattcgacgcttgagagt |
3708002 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 204
Target Start/End: Complemental strand, 3778002 - 3777860
Alignment:
| Q |
62 |
agtttttaccatctgggttcttggagagaaccaaggagaaaggttttgttattacatcatgggcgccgcagattcaaatcctaagtcacaactcaattgg |
161 |
Q |
| |
|
||||||||||| |||||||| ||||||||||| || |||| || ||| || | | ||||| ||||||| |||||||||||| |||| |||| || |
|
|
| T |
3778002 |
agtttttaccacaagggttcttagagagaaccaaagaacaagggttagttgttcctttttgggccccgcagactcaaatcctaagccacatttcaaccgg |
3777903 |
T |
|
| Q |
162 |
tggattcttgactcattgtggctggaattcaacccttgagagt |
204 |
Q |
| |
|
|||||| || || |||||||| |||||||| || || |||||| |
|
|
| T |
3777902 |
tggatttttaacacattgtggttggaattcgacactggagagt |
3777860 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 33005188 - 33005106
Alignment:
| Q |
121 |
tgggcgccgcagattcaaatcctaagtcacaactcaattggtggattcttgactcattgtggctggaattcaacccttgagag |
203 |
Q |
| |
|
||||| || |||| |||||||||||| |||| |||| ||||||||| || || |||||||| ||||||||||| || ||||| |
|
|
| T |
33005188 |
tgggcaccacagactcaaatcctaagccacacttcaactggtggatttttaacacattgtggttggaattcaacactcgagag |
33005106 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 118; Significance: 3e-60; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 27 - 240
Target Start/End: Original strand, 5902577 - 5902790
Alignment:
| Q |
27 |
atatctttcagcagaaaatgacattgacactttgcagtttttaccatctgggttcttggagagaaccaaggagaaaggttttgttattacatcatgggcg |
126 |
Q |
| |
|
||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||| |||| | |||||| |||||||||| |
|
|
| T |
5902577 |
atatctttcagcagaaaatgatgttgatcttttgcagtttttaccacctgggttcttggagagaaccaaggagcaagggatggttattccatcatgggca |
5902676 |
T |
|
| Q |
127 |
ccgcagattcaaatcctaagtcacaactcaattggtggattcttgactcattgtggctggaattcaacccttgagagtgtgttgcatggtgtgccactaa |
226 |
Q |
| |
|
|| |||||| ||| || ||||||| ||| ||||||||||||||| ||| |||||||||||||||| ||||||||||||| |||||||||||||||||| |
|
|
| T |
5902677 |
cctcagattgaaacacttagtcacagatcagttggtggattcttgagtcactgtggctggaattcaatccttgagagtgtgatgcatggtgtgccactaa |
5902776 |
T |
|
| Q |
227 |
tcacatggcctttg |
240 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
5902777 |
tcacatggcctttg |
5902790 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 27 - 237
Target Start/End: Original strand, 5906061 - 5906271
Alignment:
| Q |
27 |
atatctttcagcagaaaatgacattgacactttgcagtttttaccatctgggttcttggagagaaccaaggagaaaggttttgttattacatcatgggcg |
126 |
Q |
| |
|
||||||||||||| |||| || |||| || |||| ||||||||||||||||||||||||||||||||||| |||| | |||||| |||||||||| |
|
|
| T |
5906061 |
atatctttcagcacaaaacgatgttgatctttcgcaggttttaccatctgggttcttggagagaaccaaggagcaaggaatggttattccatcatgggca |
5906160 |
T |
|
| Q |
127 |
ccgcagattcaaatcctaagtcacaactcaattggtggattcttgactcattgtggctggaattcaacccttgagagtgtgttgcatggtgtgccactaa |
226 |
Q |
| |
|
|| |||||| ||||||| ||||||| ||| ||||||||||||||| ||||||||| |||| ||||| ||||||||| | | |||||||||||||||||| |
|
|
| T |
5906161 |
cctcagattgaaatccttagtcacatatcagttggtggattcttgagtcattgtggttggagttcaatccttgagagcgcgatgcatggtgtgccactaa |
5906260 |
T |
|
| Q |
227 |
tcacatggcct |
237 |
Q |
| |
|
||||||||||| |
|
|
| T |
5906261 |
tcacatggcct |
5906271 |
T |
|
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Target: scaffold0288 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 195
Target Start/End: Original strand, 3516 - 3557
Alignment:
| Q |
154 |
tcaattggtggattcttgactcattgtggctggaattcaacc |
195 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
3516 |
tcaattggtggattcttgactcattgtggatggaattcaacc |
3557 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 38; Significance: 0.000000000001; HSPs: 14)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 195
Target Start/End: Complemental strand, 4461458 - 4461417
Alignment:
| Q |
154 |
tcaattggtggattcttgactcattgtggctggaattcaacc |
195 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
4461458 |
tcaattggtggattcttgactcattgtggatggaattcaacc |
4461417 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 195
Target Start/End: Complemental strand, 4622476 - 4622436
Alignment:
| Q |
155 |
caattggtggattcttgactcattgtggctggaattcaacc |
195 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
4622476 |
caattggtggattcttgactcattgtggatggaattcaacc |
4622436 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 195
Target Start/End: Complemental strand, 4557460 - 4557419
Alignment:
| Q |
154 |
tcaattggtggattcttgactcattgtggctggaattcaacc |
195 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| |||||| |
|
|
| T |
4557460 |
tcaattggtggattcttgactcattgtggatggaactcaacc |
4557419 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 195
Target Start/End: Complemental strand, 4592566 - 4592525
Alignment:
| Q |
154 |
tcaattggtggattcttgactcattgtggctggaattcaacc |
195 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| |||||| |
|
|
| T |
4592566 |
tcaattggtggattcttgactcattgtggatggaactcaacc |
4592525 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 193
Target Start/End: Original strand, 4490152 - 4490191
Alignment:
| Q |
154 |
tcaattggtggattcttgactcattgtggctggaattcaa |
193 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| |||| |
|
|
| T |
4490152 |
tcaattggtggattcttgactcattgtggatggaactcaa |
4490191 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Original strand, 4266966 - 4267004
Alignment:
| Q |
157 |
attggtggattcttgactcattgtggctggaattcaacc |
195 |
Q |
| |
|
||||||||||||||||||||||| || |||||||||||| |
|
|
| T |
4266966 |
attggtggattcttgactcattgcggatggaattcaacc |
4267004 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 200
Target Start/End: Original strand, 4299618 - 4299664
Alignment:
| Q |
154 |
tcaattggtggattcttgactcattgtggctggaattcaacccttga |
200 |
Q |
| |
|
||||||||||||||||||||||| ||||| ||||| |||||| |||| |
|
|
| T |
4299618 |
tcaattggtggattcttgactcactgtggatggaactcaaccattga |
4299664 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 200
Target Start/End: Complemental strand, 4626286 - 4626240
Alignment:
| Q |
154 |
tcaattggtggattcttgactcattgtggctggaattcaacccttga |
200 |
Q |
| |
|
||||||||||||||||| ||||||||||| ||||| |||||| |||| |
|
|
| T |
4626286 |
tcaattggtggattcttaactcattgtggatggaactcaaccattga |
4626240 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 194
Target Start/End: Complemental strand, 4493287 - 4493250
Alignment:
| Q |
157 |
attggtggattcttgactcattgtggctggaattcaac |
194 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| ||||| |
|
|
| T |
4493287 |
attggtggattcttgactcattgtggatggaactcaac |
4493250 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 195
Target Start/End: Complemental strand, 4506192 - 4506151
Alignment:
| Q |
154 |
tcaattggtggattcttgactcattgtggctggaattcaacc |
195 |
Q |
| |
|
|||||||||||||||||||||||||| || ||||| |||||| |
|
|
| T |
4506192 |
tcaattggtggattcttgactcattgcggatggaactcaacc |
4506151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 195
Target Start/End: Complemental strand, 4585971 - 4585930
Alignment:
| Q |
154 |
tcaattggtggattcttgactcattgtggctggaattcaacc |
195 |
Q |
| |
|
||||||||||||||||||||||| ||||| ||||| |||||| |
|
|
| T |
4585971 |
tcaattggtggattcttgactcactgtggatggaactcaacc |
4585930 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 195
Target Start/End: Original strand, 4613515 - 4613556
Alignment:
| Q |
154 |
tcaattggtggattcttgactcattgtggctggaattcaacc |
195 |
Q |
| |
|
|||||||| |||||||||||||||||||| ||||| |||||| |
|
|
| T |
4613515 |
tcaattggcggattcttgactcattgtggatggaactcaacc |
4613556 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 206
Target Start/End: Complemental strand, 845059 - 845007
Alignment:
| Q |
154 |
tcaattggtggattcttgactcattgtggctggaattcaacccttgagagtgt |
206 |
Q |
| |
|
||||||||||| || || ||||||||||| ||||||||||| ||||| ||||| |
|
|
| T |
845059 |
tcaattggtgggtttttaactcattgtggttggaattcaacacttgaaagtgt |
845007 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 206
Target Start/End: Complemental strand, 870343 - 870291
Alignment:
| Q |
154 |
tcaattggtggattcttgactcattgtggctggaattcaacccttgagagtgt |
206 |
Q |
| |
|
||||||||||| || || ||||||||||| ||||||||||| ||||| ||||| |
|
|
| T |
870343 |
tcaattggtgggtttttaactcattgtggttggaattcaacacttgaaagtgt |
870291 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 200
Target Start/End: Original strand, 41511444 - 41511490
Alignment:
| Q |
154 |
tcaattggtggattcttgactcattgtggctggaattcaacccttga |
200 |
Q |
| |
|
|||||||||||||| |||||||||||||| ||||||||||| ||||| |
|
|
| T |
41511444 |
tcaattggtggatttttgactcattgtggttggaattcaacacttga |
41511490 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 3086755 - 3086715
Alignment:
| Q |
154 |
tcaattggtggattcttgactcattgtggctggaattcaac |
194 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| ||||| |
|
|
| T |
3086755 |
tcaattggtggattcttgactcattgtggatggaactcaac |
3086715 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0477 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 200
Target Start/End: Original strand, 4483 - 4529
Alignment:
| Q |
154 |
tcaattggtggattcttgactcattgtggctggaattcaacccttga |
200 |
Q |
| |
|
|||||||||||||||||||||||||| || ||||| |||||| |||| |
|
|
| T |
4483 |
tcaattggtggattcttgactcattgcggatggaactcaaccattga |
4529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0184 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0184
Description:
Target: scaffold0184; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 206
Target Start/End: Complemental strand, 11687 - 11635
Alignment:
| Q |
154 |
tcaattggtggattcttgactcattgtggctggaattcaacccttgagagtgt |
206 |
Q |
| |
|
|||||||||| ||| |||||||||||||| ||||||||| ||||||||||| |
|
|
| T |
11687 |
tcaattggtgcatttttgactcattgtggttggaattcagttcttgagagtgt |
11635 |
T |
|
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Target: chr5 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 20155250 - 20155290
Alignment:
| Q |
154 |
tcaattggtggattcttgactcattgtggctggaattcaac |
194 |
Q |
| |
|
|||||||| ||||||||||| |||||||| ||||||||||| |
|
|
| T |
20155250 |
tcaattggaggattcttgacacattgtggatggaattcaac |
20155290 |
T |
|
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