View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19379_high_2 (Length: 620)

Name: NF19379_high_2
Description: NF19379
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19379_high_2
NF19379_high_2
[»] chr4 (75 HSPs)
chr4 (18-617)||(44355755-44356361)
chr4 (48-271)||(22318314-22318539)
chr4 (48-262)||(39078601-39078817)
chr4 (48-236)||(50727843-50728033)
chr4 (48-236)||(50735857-50736047)
chr4 (31-324)||(55065245-55065541)
chr4 (38-236)||(20802451-20802651)
chr4 (31-236)||(23521846-23522053)
chr4 (48-228)||(47642421-47642603)
chr4 (31-249)||(52949674-52949893)
chr4 (31-236)||(29785450-29785657)
chr4 (77-283)||(7001773-7001977)
chr4 (31-206)||(12600882-12601059)
chr4 (48-254)||(50178422-50178631)
chr4 (101-257)||(53200628-53200785)
chr4 (31-228)||(2725046-2725244)
chr4 (51-236)||(21579992-21580179)
chr4 (85-236)||(37695510-37695661)
chr4 (31-236)||(37865719-37865926)
chr4 (48-236)||(33176962-33177152)
chr4 (31-207)||(38812515-38812693)
chr4 (48-236)||(44324272-44324462)
chr4 (51-207)||(44649097-44649255)
chr4 (48-183)||(50729472-50729609)
chr4 (48-183)||(28115271-28115407)
chr4 (31-236)||(21202706-21202912)
chr4 (48-236)||(24210284-24210475)
chr4 (31-236)||(33552755-33552962)
chr4 (31-207)||(1231306-1231484)
chr4 (48-236)||(3649602-3649792)
chr4 (48-236)||(56154587-56154777)
chr4 (99-236)||(43641065-43641202)
chr4 (18-236)||(9512240-9512460)
chr4 (31-228)||(24002312-24002512)
chr4 (38-236)||(49152020-49152219)
chr4 (31-236)||(6776544-6776751)
chr4 (31-236)||(20517935-20518142)
chr4 (31-279)||(36497139-36497390)
chr4 (31-236)||(36743601-36743808)
chr4 (31-236)||(38486170-38486377)
chr4 (31-236)||(46680423-46680630)
chr4 (81-236)||(55593851-55594006)
chr4 (31-207)||(36885927-36886105)
chr4 (49-236)||(9947895-9948084)
chr4 (31-205)||(4325788-4325964)
chr4 (49-207)||(52319318-52319478)
chr4 (99-241)||(21098494-21098637)
chr4 (114-321)||(37931801-37932008)
chr4 (31-236)||(41711813-41712020)
chr4 (31-183)||(20694390-20694544)
chr4 (78-228)||(54542964-54543113)
chr4 (48-167)||(26083374-26083495)
chr4 (79-159)||(52673854-52673934)
chr4 (114-321)||(7554955-7555162)
chr4 (48-321)||(9807037-9807311)
chr4 (49-254)||(45577619-45577828)
chr4 (48-236)||(11056008-11056198)
chr4 (81-166)||(16320555-16320640)
chr4 (99-183)||(23327937-23328022)
chr4 (157-321)||(985164-985327)
chr4 (99-167)||(25978594-25978662)
chr4 (18-183)||(2629851-2630018)
chr4 (18-183)||(32181282-32181449)
chr4 (101-232)||(43739431-43739562)
chr4 (112-203)||(43893576-43893667)
chr4 (78-236)||(29616136-29616289)
chr4 (129-227)||(41261974-41262072)
chr4 (195-236)||(47667128-47667169)
chr4 (117-184)||(38520517-38520584)
chr4 (18-143)||(42870030-42870157)
chr4 (78-152)||(42772838-42772912)
chr4 (48-152)||(47361344-47361449)
chr4 (101-165)||(10587072-10587136)
chr4 (39-184)||(30942806-30942954)
chr4 (99-235)||(41897341-41897477)
[»] scaffold0650 (1 HSPs)
scaffold0650 (48-324)||(1586-1864)
[»] chr8 (49 HSPs)
chr8 (48-236)||(6386539-6386729)
chr8 (31-236)||(29563161-29563368)
chr8 (48-324)||(37618344-37618622)
chr8 (48-324)||(15001341-15001619)
chr8 (31-321)||(31513518-31513811)
chr8 (49-262)||(29611008-29611223)
chr8 (48-236)||(8673007-8673197)
chr8 (31-254)||(10467009-10467234)
chr8 (48-254)||(7591399-7591607)
chr8 (31-236)||(34063091-34063298)
chr8 (31-321)||(3251591-3251884)
chr8 (78-254)||(41548563-41548739)
chr8 (31-236)||(25478206-25478413)
chr8 (31-236)||(41709740-41709947)
chr8 (31-207)||(4052472-4052650)
chr8 (49-242)||(16595103-16595297)
chr8 (31-254)||(29672258-29672484)
chr8 (48-236)||(45446418-45446608)
chr8 (48-254)||(30542974-30543183)
chr8 (31-236)||(32019936-32020143)
chr8 (48-236)||(37664235-37664425)
chr8 (48-324)||(40388915-40389193)
chr8 (99-236)||(32303590-32303727)
chr8 (31-236)||(5968799-5969006)
chr8 (78-205)||(7394798-7394925)
chr8 (51-236)||(10656641-10656828)
chr8 (51-228)||(14004999-14005178)
chr8 (48-228)||(22999228-22999411)
chr8 (48-228)||(13406887-13407069)
chr8 (78-236)||(31732027-31732185)
chr8 (49-236)||(27103922-27104111)
chr8 (49-203)||(22756364-22756520)
chr8 (31-236)||(34101471-34101678)
chr8 (48-321)||(45113933-45114208)
chr8 (116-234)||(10932701-10932819)
chr8 (104-233)||(10531244-10531373)
chr8 (48-166)||(30501178-30501298)
chr8 (31-236)||(12753260-12753467)
chr8 (117-249)||(6460213-6460344)
chr8 (111-236)||(10320294-10320419)
chr8 (78-167)||(35225694-35225783)
chr8 (78-183)||(37861875-37861980)
chr8 (78-183)||(39642899-39643004)
chr8 (105-241)||(5859483-5859619)
chr8 (99-207)||(21272676-21272784)
chr8 (48-137)||(37474762-37474853)
chr8 (129-195)||(36426282-36426348)
chr8 (143-228)||(28746294-28746379)
chr8 (78-183)||(17805707-17805812)
[»] chr3 (55 HSPs)
chr3 (48-236)||(34026631-34026821)
chr3 (31-321)||(28675668-28675961)
chr3 (101-242)||(44000219-44000360)
chr3 (78-324)||(51925171-51925417)
chr3 (77-236)||(26282349-26282508)
chr3 (31-207)||(29584868-29585046)
chr3 (78-324)||(33364741-33364987)
chr3 (31-206)||(42636317-42636494)
chr3 (48-254)||(31882953-31883161)
chr3 (31-236)||(1344621-1344828)
chr3 (82-236)||(21221327-21221481)
chr3 (48-167)||(19906795-19906916)
chr3 (49-236)||(53557727-53557916)
chr3 (48-262)||(3867580-3867796)
chr3 (31-236)||(38213318-38213525)
chr3 (31-236)||(40094467-40094674)
chr3 (31-236)||(44116903-44117110)
chr3 (48-236)||(12349102-12349292)
chr3 (52-236)||(34351303-34351489)
chr3 (48-228)||(49748842-49749024)
chr3 (48-228)||(50386387-50386569)
chr3 (78-236)||(51296545-51296703)
chr3 (31-236)||(4851372-4851577)
chr3 (49-207)||(20609580-20609740)
chr3 (48-321)||(29645944-29646220)
chr3 (31-236)||(51259694-51259901)
chr3 (31-257)||(25860335-25860564)
chr3 (48-207)||(39052769-39052930)
chr3 (111-254)||(28624916-28625058)
chr3 (81-228)||(47958398-47958545)
chr3 (48-236)||(3864606-3864795)
chr3 (78-236)||(25927290-25927448)
chr3 (48-183)||(21373947-21374084)
chr3 (78-183)||(50678815-50678920)
chr3 (31-205)||(24571276-24571452)
chr3 (31-236)||(2135034-2135241)
chr3 (31-236)||(20255009-20255215)
chr3 (31-167)||(24721518-24721656)
chr3 (78-152)||(52300484-52300558)
chr3 (51-236)||(54622731-54622917)
chr3 (48-183)||(3964305-3964442)
chr3 (107-167)||(37075204-37075264)
chr3 (99-206)||(389437-389544)
chr3 (48-141)||(41682984-41683079)
chr3 (101-195)||(14155447-14155540)
chr3 (115-236)||(5442255-5442376)
chr3 (87-151)||(32321590-32321654)
chr3 (101-200)||(8648543-8648642)
chr3 (101-236)||(30258837-30258971)
chr3 (92-143)||(32768649-32768700)
chr3 (105-151)||(26106666-26106712)
chr3 (80-152)||(6179473-6179546)
chr3 (142-235)||(32621834-32621927)
chr3 (78-183)||(39215432-39215537)
chr3 (104-148)||(47041508-47041552)
[»] chr5 (42 HSPs)
chr5 (30-236)||(2351643-2351851)
chr5 (30-236)||(32528678-32528886)
chr5 (81-207)||(22432287-22432413)
chr5 (18-236)||(31770504-31770724)
chr5 (30-254)||(39918451-39918678)
chr5 (31-207)||(7523164-7523342)
chr5 (78-183)||(8136853-8136958)
chr5 (48-236)||(21739104-21739294)
chr5 (78-183)||(5571619-5571724)
chr5 (25-228)||(31879996-31880201)
chr5 (31-236)||(35701240-35701447)
chr5 (78-236)||(7208205-7208363)
chr5 (31-207)||(11963333-11963511)
chr5 (50-236)||(4818085-4818273)
chr5 (78-236)||(553359-553518)
chr5 (48-229)||(28090463-28090646)
chr5 (78-228)||(3735328-3735478)
chr5 (39-271)||(18470362-18470596)
chr5 (48-236)||(40489300-40489490)
chr5 (78-236)||(41790437-41790595)
chr5 (48-207)||(23091247-23091408)
chr5 (102-194)||(700600-700692)
chr5 (48-166)||(4689641-4689761)
chr5 (49-167)||(5598512-5598632)
chr5 (78-236)||(6284273-6284432)
chr5 (49-224)||(17031132-17031309)
chr5 (51-236)||(39788155-39788343)
chr5 (31-236)||(24181550-24181757)
chr5 (112-207)||(27839082-27839177)
chr5 (31-236)||(29241341-29241548)
chr5 (51-228)||(34794858-34795037)
chr5 (79-236)||(7725785-7725942)
chr5 (31-183)||(31644462-31644615)
chr5 (114-236)||(40182427-40182549)
chr5 (18-166)||(7770192-7770342)
chr5 (48-228)||(24036201-24036383)
chr5 (51-254)||(41459533-41459738)
chr5 (49-136)||(37148533-37148622)
chr5 (101-236)||(22493417-22493551)
chr5 (101-207)||(1338612-1338718)
chr5 (39-183)||(32092916-32093061)
chr5 (77-241)||(24206328-24206493)
[»] chr2 (55 HSPs)
chr2 (48-254)||(32766441-32766650)
chr2 (49-183)||(41366048-41366184)
chr2 (48-236)||(5278771-5278961)
chr2 (31-236)||(9732850-9733057)
chr2 (48-236)||(35114748-35114938)
chr2 (48-236)||(44284592-44284782)
chr2 (48-321)||(33366487-33366763)
chr2 (31-228)||(7761493-7761692)
chr2 (78-324)||(13829313-13829559)
chr2 (31-207)||(37308647-37308825)
chr2 (31-236)||(2645007-2645213)
chr2 (48-236)||(7258859-7259050)
chr2 (78-320)||(16104152-16104395)
chr2 (78-236)||(17540677-17540836)
chr2 (31-236)||(32497878-32498085)
chr2 (31-236)||(34338773-34338980)
chr2 (78-236)||(33889206-33889364)
chr2 (77-207)||(40832437-40832567)
chr2 (31-207)||(42706351-42706529)
chr2 (49-236)||(19513627-19513816)
chr2 (31-236)||(3913380-3913587)
chr2 (36-228)||(12672399-12672593)
chr2 (48-236)||(30326269-30326458)
chr2 (48-236)||(41934544-41934734)
chr2 (48-262)||(6896105-6896321)
chr2 (101-324)||(18126980-18127203)
chr2 (114-236)||(37003873-37003995)
chr2 (115-207)||(9717216-9717308)
chr2 (99-254)||(26796174-26796328)
chr2 (78-233)||(35472969-35473124)
chr2 (48-321)||(39461191-39461467)
chr2 (31-234)||(30798408-30798614)
chr2 (78-167)||(38993040-38993129)
chr2 (49-167)||(38623242-38623362)
chr2 (48-228)||(4641487-4641667)
chr2 (106-241)||(7294389-7294523)
chr2 (39-257)||(30712799-30713022)
chr2 (78-236)||(10399839-10399997)
chr2 (78-236)||(11114835-11114993)
chr2 (48-236)||(18685799-18685989)
chr2 (78-236)||(42365540-42365698)
chr2 (81-182)||(16177855-16177956)
chr2 (101-321)||(26418800-26419021)
chr2 (84-204)||(12939275-12939395)
chr2 (129-200)||(13249420-13249491)
chr2 (130-228)||(2086043-2086141)
chr2 (31-167)||(40692329-40692467)
chr2 (101-181)||(26981701-26981781)
chr2 (75-151)||(29104244-29104320)
chr2 (88-167)||(1247179-1247258)
chr2 (190-233)||(6453328-6453370)
chr2 (130-228)||(20907560-20907658)
chr2 (48-151)||(8112348-8112453)
chr2 (48-167)||(28824494-28824615)
chr2 (92-152)||(35170196-35170256)
[»] scaffold0155 (1 HSPs)
scaffold0155 (105-241)||(33546-33682)
[»] chr6 (51 HSPs)
chr6 (78-254)||(10485102-10485278)
chr6 (31-236)||(3259646-3259853)
chr6 (48-241)||(28068769-28068962)
chr6 (31-236)||(3932766-3932973)
chr6 (48-201)||(24203360-24203515)
chr6 (62-183)||(9902649-9902771)
chr6 (36-228)||(32409816-32410010)
chr6 (116-236)||(29424613-29424733)
chr6 (31-236)||(10324070-10324277)
chr6 (48-236)||(11613767-11613957)
chr6 (48-236)||(17867798-17867988)
chr6 (48-236)||(17877581-17877771)
chr6 (48-236)||(18597134-18597324)
chr6 (48-236)||(32132356-32132546)
chr6 (48-254)||(10959945-10960153)
chr6 (78-205)||(11279122-11279249)
chr6 (31-207)||(11382056-11382232)
chr6 (31-228)||(24242635-24242834)
chr6 (78-236)||(2614859-2615017)
chr6 (118-253)||(7396173-7396306)
chr6 (49-236)||(15276914-15277103)
chr6 (49-236)||(34176793-34176982)
chr6 (31-205)||(11212251-11212427)
chr6 (48-183)||(166899-167036)
chr6 (78-183)||(3379726-3379831)
chr6 (78-207)||(15277288-15277417)
chr6 (49-227)||(9613946-9614126)
chr6 (118-242)||(27824698-27824822)
chr6 (48-183)||(14925432-14925569)
chr6 (27-242)||(35004083-35004300)
chr6 (79-183)||(8177891-8177994)
chr6 (81-249)||(14808012-14808179)
chr6 (102-254)||(31870132-31870284)
chr6 (136-286)||(15400651-15400800)
chr6 (136-286)||(15412438-15412587)
chr6 (136-286)||(15428032-15428181)
chr6 (187-262)||(32614055-32614130)
chr6 (80-237)||(3290634-3290789)
chr6 (77-303)||(5650711-5650937)
chr6 (48-163)||(11675350-11675467)
chr6 (78-183)||(18057535-18057640)
chr6 (78-262)||(17443199-17443383)
chr6 (125-165)||(23636257-23636297)
chr6 (101-149)||(24785105-24785153)
chr6 (78-321)||(34683993-34684237)
chr6 (78-153)||(2122769-2122844)
chr6 (48-165)||(32860085-32860204)
chr6 (78-167)||(4494122-4494212)
chr6 (113-167)||(29054388-29054442)
chr6 (115-152)||(1004471-1004508)
chr6 (105-229)||(27756275-27756400)
[»] chr1 (62 HSPs)
chr1 (101-254)||(34283883-34284038)
chr1 (31-236)||(6711041-6711248)
chr1 (31-236)||(28340298-28340505)
chr1 (48-271)||(6029313-6029538)
chr1 (48-228)||(42512782-42512964)
chr1 (48-254)||(31004086-31004294)
chr1 (31-236)||(844719-844926)
chr1 (81-236)||(12890210-12890365)
chr1 (31-236)||(35387306-35387513)
chr1 (78-236)||(7183890-7184048)
chr1 (48-236)||(16386826-16387016)
chr1 (30-321)||(42510411-42510705)
chr1 (48-271)||(15539902-15540127)
chr1 (49-236)||(16451099-16451288)
chr1 (31-234)||(45490870-45491075)
chr1 (18-236)||(26118197-26118417)
chr1 (31-236)||(30105675-30105882)
chr1 (48-204)||(50540348-50540506)
chr1 (48-236)||(51264467-51264657)
chr1 (31-204)||(1351430-1351605)
chr1 (101-324)||(11772699-11772922)
chr1 (101-324)||(25539739-25539962)
chr1 (31-236)||(32270325-32270532)
chr1 (78-236)||(16437334-16437492)
chr1 (31-183)||(17887973-17888127)
chr1 (48-183)||(13994087-13994224)
chr1 (48-207)||(26764807-26764968)
chr1 (99-236)||(50382468-50382605)
chr1 (114-254)||(38663086-38663226)
chr1 (51-193)||(41967864-41968008)
chr1 (48-254)||(50304605-50304813)
chr1 (78-236)||(1601145-1601301)
chr1 (31-201)||(41972918-41973090)
chr1 (31-183)||(24339633-24339788)
chr1 (31-203)||(32289339-32289513)
chr1 (48-228)||(39281874-39282056)
chr1 (65-236)||(504421-504593)
chr1 (173-321)||(30798830-30798978)
chr1 (101-233)||(46447639-46447771)
chr1 (101-192)||(26733571-26733662)
chr1 (78-236)||(6144030-6144188)
chr1 (31-207)||(17327644-17327822)
chr1 (48-228)||(49303366-49303547)
chr1 (121-253)||(2761643-2761774)
chr1 (48-234)||(16476167-16476355)
chr1 (49-207)||(16704727-16704887)
chr1 (101-236)||(32467887-32468023)
chr1 (78-242)||(47242560-47242722)
chr1 (85-236)||(44738093-44738243)
chr1 (101-236)||(45658793-45658928)
chr1 (173-320)||(49799265-49799412)
chr1 (48-167)||(5109769-5109890)
chr1 (102-207)||(32215291-32215396)
chr1 (48-167)||(39792848-39792969)
chr1 (101-236)||(6771339-6771475)
chr1 (187-230)||(16862565-16862608)
chr1 (48-192)||(7837149-7837295)
chr1 (114-204)||(42705318-42705408)
chr1 (173-242)||(4895359-4895428)
chr1 (111-236)||(570358-570485)
chr1 (18-204)||(3414835-3415023)
chr1 (173-241)||(48139926-48139994)
[»] chr7 (59 HSPs)
chr7 (101-236)||(48699365-48699500)
chr7 (31-321)||(21784752-21785045)
chr7 (31-236)||(10932478-10932685)
chr7 (81-236)||(32873742-32873897)
chr7 (48-228)||(43368176-43368358)
chr7 (31-236)||(47953157-47953364)
chr7 (49-236)||(40753122-40753311)
chr7 (48-321)||(329352-329627)
chr7 (31-236)||(26994146-26994353)
chr7 (31-236)||(36769490-36769697)
chr7 (31-236)||(43158607-43158814)
chr7 (78-236)||(11321855-11322013)
chr7 (78-236)||(26371779-26371937)
chr7 (52-236)||(30849188-30849374)
chr7 (48-228)||(38301318-38301499)
chr7 (78-236)||(47316668-47316826)
chr7 (101-294)||(29372772-29372965)
chr7 (31-228)||(18386500-18386698)
chr7 (31-236)||(44748662-44748869)
chr7 (31-167)||(1870171-1870309)
chr7 (48-183)||(41211138-41211275)
chr7 (102-314)||(2048841-2049052)
chr7 (78-254)||(15035223-15035399)
chr7 (78-194)||(43189212-43189328)
chr7 (31-236)||(3922624-3922831)
chr7 (48-236)||(18470651-18470839)
chr7 (31-228)||(29661298-29661497)
chr7 (101-236)||(46633664-46633799)
chr7 (49-262)||(48445462-48445677)
chr7 (78-236)||(3891996-3892154)
chr7 (78-167)||(1363672-1363761)
chr7 (48-167)||(16963174-16963295)
chr7 (78-167)||(23349261-23349350)
chr7 (48-167)||(26910348-26910469)
chr7 (78-183)||(30598978-30599083)
chr7 (104-228)||(26652841-26652965)
chr7 (101-228)||(34295397-34295524)
chr7 (78-152)||(11250668-11250742)
chr7 (136-229)||(21408328-21408421)
chr7 (78-167)||(34519544-34519633)
chr7 (78-182)||(20127310-20127414)
chr7 (114-254)||(34117401-34117541)
chr7 (99-167)||(41665566-41665634)
chr7 (81-236)||(9913492-9913646)
chr7 (81-236)||(9927180-9927334)
chr7 (78-236)||(22724002-22724160)
chr7 (145-227)||(29992732-29992813)
chr7 (78-183)||(21133392-21133497)
chr7 (102-254)||(29455843-29455992)
chr7 (139-236)||(47947727-47947824)
chr7 (120-212)||(35645438-35645530)
chr7 (178-289)||(3359911-3360022)
chr7 (50-167)||(22724471-22724590)
chr7 (78-152)||(11822274-11822348)
chr7 (101-207)||(22631734-22631840)
chr7 (114-160)||(46627213-46627259)
chr7 (101-162)||(17237117-17237178)
chr7 (136-229)||(38360045-38360138)
chr7 (117-229)||(21408635-21408746)
[»] scaffold0054 (2 HSPs)
scaffold0054 (39-257)||(19849-20069)
scaffold0054 (31-236)||(23540-23745)
[»] scaffold0169 (2 HSPs)
scaffold0169 (48-228)||(17997-18179)
scaffold0169 (99-228)||(12532-12661)
[»] scaffold0004 (1 HSPs)
scaffold0004 (49-236)||(372908-373097)
[»] scaffold0360 (2 HSPs)
scaffold0360 (77-229)||(13553-13705)
scaffold0360 (101-183)||(15379-15461)
[»] scaffold0027 (1 HSPs)
scaffold0027 (48-237)||(15134-15325)
[»] scaffold0181 (1 HSPs)
scaffold0181 (78-236)||(19066-19223)
[»] scaffold0208 (1 HSPs)
scaffold0208 (48-194)||(2281-2429)
[»] scaffold0050 (1 HSPs)
scaffold0050 (48-162)||(42893-43009)
[»] scaffold0729 (1 HSPs)
scaffold0729 (31-236)||(4505-4712)
[»] scaffold0077 (1 HSPs)
scaffold0077 (101-242)||(7456-7601)
[»] scaffold0280 (1 HSPs)
scaffold0280 (48-167)||(13630-13751)
[»] scaffold0014 (1 HSPs)
scaffold0014 (101-236)||(101912-102047)
[»] scaffold0047 (1 HSPs)
scaffold0047 (18-153)||(19069-19206)
[»] scaffold0957 (1 HSPs)
scaffold0957 (31-207)||(2422-2599)
[»] scaffold0098 (1 HSPs)
scaffold0098 (48-228)||(51410-51591)
[»] scaffold0025 (1 HSPs)
scaffold0025 (48-324)||(5382-5661)


Alignment Details
Target: chr4 (Bit Score: 475; Significance: 0; HSPs: 75)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 475; E-Value: 0
Query Start/End: Original strand, 18 - 617
Target Start/End: Original strand, 44355755 - 44356361
Alignment:
Q  18 aggatatgatatgacaagtctagttatgctgtgtttgatttgtaaactgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatt 116  Q
    ||||||||||||||||| ||||||| ||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  44355755 aggatatgatatgacaaatctagttgtgtggtgtttgatttgtaaactgttttagggataggacaaactggaggtaagagagaggacaaaaattgaaatt 44355854  T
Q  117 tttgtccctcattaaaccacaacacaatttt-ttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagacca 215  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  44355855 tttgtccctcattaaaccacaacacaatttttttgtcttacgtacaagttgtatgatataccaaaatagtcttttgtccatcaaaaatcgtacaagacca 44355954  T
Q  216 aaagttattcaataccataaatgtttggcctgtgttgttatgacttgctttgtgctattatgtcttgtgttgttatgtccgatacttattgtttagcaaa 315  Q
    |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  44355955 aaagttattcaatagcataaaagtttggcctgtgttgttctgacttgctttgtgctattatgtcttgtgttgttatgtccgatacttactgtttagcaaa 44356054  T
Q  316 tcaaacgcagagaattaccaaaactcttcatgtcacagatcaatnnnnnnntgatgttcatcaaaattttaggtatgcattttttcttcttatttttatc 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||    
T  44356055 tcaaacgcagagaattaccaaaactcttcatgtcacagatcaataaaaaaatgatgttcatcaaaattttaggtatgcattttttcttcttatttttatc 44356154  T
Q  416 aatgtcaatcaagtcatttttcaatgtaaataatcaaatctttaaattgtgttaactatctatcttgttatcaatttttaatgtccaatttatttctcaa 515  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||    
T  44356155 aatgtcaatcaagtcatttttcaatgtaaataatcaaatctttaaattatg-taactatctaacttgttatcaatttttaatgtccaatttatttctcaa 44356253  T
Q  516 aataactcaattatttcaaaaaatggtataaac---gttattattcaatatatcttatagcaagttgagtttcaattga---tattatattaagattttc 609  Q
    |||||||||||||||||||||||||||||||||   ||||||||||||||||||||||| |||||||||||||||||||   ||||||||| |||||||     
T  44356254 aataactcaattatttcaaaaaatggtataaacttggttattattcaatatatcttataacaagttgagtttcaattgatgttattatattcagattttg 44356353  T
Q  610 ttcgacat 617  Q
    || |||||    
T  44356354 tttgacat 44356361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 48 - 271
Target Start/End: Original strand, 22318314 - 22318539
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggataga-caaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||||||||| ||| ||||||| ||| |||||| ||||||||| |||||||||||||||||||  |||||||||||||| |    
T  22318314 gtgtttgatttgtaaaactgttttagggacagaacaaactgaaggcaagagacaggacaaaatttgaaatttttgtccctcaccaaaccacaacacaact 22318413  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaatgtttggcc 245  Q
    |||||||||||||| ||||||| | | | |||||||||   |||||||   |||||||| || || || | || |||||||||| ||||||  |||| |     
T  22318414 ttttgtcttacgtagaagttgtctaaaacaccaaaataacattttgtcatccaaaaatcatataaaacaagaaattattcaatatcataaaaatttgtca 22318513  T
Q  246 tgtgttgttatgacttgctttgtgct 271  Q
    |||||||||||| ||||  |||||||    
T  22318514 tgtgttgttatgtcttgtgttgtgct 22318539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 48 - 262
Target Start/End: Complemental strand, 39078817 - 39078601
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggataga-caaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||||| ||| ||||||||||| |||||| |||||||||  ||||||||||||||||||  |||||||||||||| |    
T  39078817 gtgtttgatttgtaaaactgtttcagggacagaacaaactggaggcaagagataggacaaaacctgaaatttttgtccctcaccaaaccacaacacaaat 39078718  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaatgtttggcc 245  Q
    ||||||| ||||||| |||||| | | | |||||||||   ||||||||  |||||||| || || |  | || |||||||||||||||||  |||  ||    
T  39078717 ttttgtcctacgtacgagttgtctaaaacaccaaaataacattttgtcccccaaaaatcatataaaataagaaattattcaataccataaaaatttatcc 39078618  T
Q  246 tgtgttgttatgacttg 262  Q
    |||||||||||| ||||    
T  39078617 tgtgttgttatgccttg 39078601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 48 - 236
Target Start/End: Original strand, 50727843 - 50728033
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | | ||||||||| ||| ||| || |||||||||| | | ||||||||||||||| |||||||||||||| |    
T  50727843 gtgtttgatttgtaaaactgtttcaggtacatgacaaactgaaggcaagggacaggacaaaaactcatatttttgtccctcatcaaaccacaacacaact 50727942  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    |||||||  ||||||||||||| | | |||||||||||   |||||||| |||||||||||| || || |||| ||||||||| |||||||    
T  50727943 ttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtccctcaaaaatcgtataaaacaaaaaattattcaatgccataaa 50728033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 48 - 236
Target Start/End: Original strand, 50735857 - 50736047
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | | ||||||||| ||| ||| || |||||||||| | | ||||||||||||||| |||||||||||||| |    
T  50735857 gtgtttgatttgtaaaactgtttcaggtacatgacaaactgaaggcaagggacaggacaaaaactcatatttttgtccctcatcaaaccacaacacaact 50735956  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    |||||||  ||||||||||||| | | |||||||||||   |||||||| |||||||||||| || || |||| ||||||||| |||||||    
T  50735957 ttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtccctcaaaaatcgtataaaacaaaaaattattcaatgccataaa 50736047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 31 - 324
Target Start/End: Original strand, 55065245 - 55065541
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggata-gacaaactggaggt-aagagagaggacaaaaattgaaatttttgtccctca 127  Q
    |||| ||||||||| | |||||||||||||||| |||||| ||| | | |||||||||||||  ||| || |||||||||| | | ||||||||||||||    
T  55065245 acaactctagttattcagtgtttgatttgtaaaactgtttcaggtacaagacaaactggagggcaagggacaggacaaaaactcatatttttgtccctca 55065344  T
Q  128 ttaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaa 227  Q
      |||||||||||||| ||||||||  ||||||||||||| | | ||| |||||||   |||||||| |||||||||||| || || |||| ||| ||||    
T  55065345 ccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtccttcaaaaatcgtataaaacaaaaaattactcaa 55065444  T
Q  228 taccataaatgtttggcctgtgttgttatgacttgctttgtgctattatgtcttgtgttgttatgtccgatacttattgtttagcaaatcaaacgca 324  Q
    | |||||||  |||| |||||| |||| || ||||  |||| ||||| | |||| |  ||||||||||  |||||  ||||| ||||| ||||||||    
T  55065445 tgccataaaaatttgtcctgtgctgttctgccttgtgttgtactattttatcttatactgttatgtccagtacttgctgttttgcaaaccaaacgca 55065541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 38 - 236
Target Start/End: Original strand, 20802451 - 20802651
Alignment:
Q  38 tagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaacca 135  Q
    ||||||| | |||||||||||||||| |||||| ||| | || |||||||||||| |||||| |||||||||| | | ||||||||||||||  ||||||    
T  20802451 tagttatccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagacaggacaaaaactcatatttttgtccctcaccaaacca 20802550  T
Q  136 caacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataa 235  Q
    || ||||| ||||||||  ||||||||||||| | | |||||||||||   |||||||| ||||||||| || || || |||| ||| ||||| ||||||    
T  20802551 catcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcatataaaacaaaaaattactcaatgccataa 20802650  T
Q  236 a 236  Q
    |    
T  20802651 a 20802651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 31 - 236
Target Start/End: Complemental strand, 23522053 - 23521846
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | || |||||||||| | ||| || |||||||||| | | ||||||||||||||     
T  23522053 acaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaagcaagggataggacaaaaactcatatttttgtccctcac 23521954  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||||||||| ||||||||  ||||||||||||| | | |||||||||||   |||||||| |||||||||||| || || |||| ||| |||||    
T  23521953 caaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 23521854  T
Q  229 accataaa 236  Q
     |||||||    
T  23521853 gccataaa 23521846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 48 - 228
Target Start/End: Original strand, 47642421 - 47642603
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | || ||||||||||||||||||| | || ||||| ||| ||||||||||||||  |||||||||||||| |    
T  47642421 gtgtttgatttgtaaaactgtttcaggcacaggacaaactggaggtaagagacaagataaaaactgatatttttgtccctcagcaaaccacaacacaact 47642520  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
    |||||||  ||||||||||||| | | ||| |||||||   ||||||||  ||||||||||| || || |||| |||||||||    
T  47642521 ttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtcccccaaaaatcgtataaaacaaaaaattattcaat 47642603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 31 - 249
Target Start/End: Complemental strand, 52949893 - 52949674
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||| ||||||||| |||||| ||| | || |||||||||||| |||||| |||||||||| ||| ||||||||||||||     
T  52949893 acaactctagttgtccagtgtttcatttgtaaaactgtttcaggtacaggacaaactggaggcaagagacaggacaaaaactgatatttttgtccctcag 52949794  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||||||||| ||||||||  ||||||||||||| | | ||| |||||||   ||||||||  ||||||||||| || | ||||| |||||||||    
T  52949793 caaaccacaacacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtcccccaaaaatcgtataa-aacaaaaattattcaat 52949695  T
Q  229 accataaatgtttggcctgtg 249  Q
      ||||||  |||| ||||||    
T  52949694 gtcataaaaatttgtcctgtg 52949674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 31 - 236
Target Start/End: Original strand, 29785450 - 29785657
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | || |||||||||||  ||| || || ||||||| | | ||||||||||||||     
T  29785450 acaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagacaagggacagaacaaaaactcatatttttgtccctcac 29785549  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||||||||  ||||||||  ||||||||||||| | | |||||||||||   |||||||| |||||||||||| || || |||| |||||||||    
T  29785550 caaaccacaacacagctttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattattcaat 29785649  T
Q  229 accataaa 236  Q
     |||||||    
T  29785650 gccataaa 29785657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 77 - 283
Target Start/End: Complemental strand, 7001977 - 7001773
Alignment:
Q  77 agacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatac 176  Q
    ||||||||| |||| |||||| || |||||||   ||||||||||||||||  |||||||||||||| |||||||  || ||| ||||||| | | ||||    
T  7001977 agacaaactcgaggcaagagacagaacaaaaacaaaaatttttgtccctcaccaaaccacaacacaactttttgttctatgtataagttgtctaa-atac 7001879  T
Q  177 caaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaatgtttggcctgtgttgttatgacttgctttgtgctattat 276  Q
    |||||||  | |||||||| ||||||||||| |||||||||| ||||||||| |||||||  |||| ||||| ||||| || ||||  ||||| | || |    
T  7001878 caaaataa-catttgtccaccaaaaatcgtataagaccaaaaattattcaatgccataaaaatttgtcctgtattgttctgtcttgtgttgtgatgttct 7001780  T
Q  277 gtcttgt 283  Q
    |||||||    
T  7001779 gtcttgt 7001773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 31 - 206
Target Start/End: Complemental strand, 12601059 - 12600882
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| | |||| ||| | || ||||||||||| |||| || | |||||||| | | |||||||||||||||    
T  12601059 acaactctagttgtccagtgtttgatttgtaaaacagtttcaggtacaggacaaactggagataagggacaagacaaaaactcatatttttgtccctcat 12600960  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgt 206  Q
     |||||||||||||| ||||||||| ||||||||||||| | | |||||||||||   |||||||| | |||||||||    
T  12600959 caaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaatagcattttgtccctaaaaaatcgt 12600882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 48 - 254
Target Start/End: Original strand, 50178422 - 50178631
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaa-t 144  Q
    |||||||||||||||| |||||| ||| | || |||||||||||| |||||| |||||||||| ||| |||||||| |||||  |||||||| ||||| |    
T  50178422 gtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagacaggacaaaaactgatatttttgtgcctcagcaaaccacagcacaact 50178521  T
Q  145 tttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaatgtttggc 244  Q
    ||||||||  ||||||||||||| | | ||| |||||||   ||||||||  ||||||||||| || || |||| |||||||||  ||||||  |||| |    
T  50178522 tttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtcccccaaaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgtc 50178621  T
Q  245 ctgtgttgtt 254  Q
    ||||| ||||    
T  50178622 ctgtgatgtt 50178631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 101 - 257
Target Start/End: Original strand, 53200628 - 53200785
Alignment:
Q  101 gacaaaaattgaaatttttgtccctcattaaaccacaacacaa-ttttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaa 199  Q
    |||||||| ||||||||||||||||||  |||||||| ||||| |||||||||  ||||||||||||| | | | | ||||||| | ||| |||| ||||    
T  53200628 gacaaaaactgaaatttttgtccctcaccaaaccacagcacaacttttttgtcccacgtacaagttgtctaaaacatcaaaatagtatttcgtccctcaa 53200727  T
Q  200 aaatcgtacaagaccaaaagttattcaataccataaatgtttggcctgtgttgttatg 257  Q
    ||||| ||||| || |||| |||||||||||||||||  ||||  |||||||||||||    
T  53200728 aaatcatacaaaacaaaaaattattcaataccataaaaatttgttctgtgttgttatg 53200785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 31 - 228
Target Start/End: Original strand, 2725046 - 2725244
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| || ||||||| | || |||||||||||| ||| || |||||||||| | | ||||||||||||||     
T  2725046 acaactctagttgtccagtgtttgatttgtaaaactcttttaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcac 2725145  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||| ||||| ||||||||  ||||||||||||| | | |||||||||||   |||||||| |||||||||||| || || |||| ||| |||||    
T  2725146 caaaccacatcacaactttttgtc-cacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 2725244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 51 - 236
Target Start/End: Complemental strand, 21580179 - 21579992
Alignment:
Q  51 tttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttt 148  Q
    ||||||||||||| |||||| ||| | || ||||| |||||| ||| || |||||||||| | | ||||||||||||||  |||||||| ||||| ||||    
T  21580179 tttgatttgtaaaactgtttcaggtacaggacaaattggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttt 21580080  T
Q  149 tgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    ||||| |||||||| |||| | | |||||||||||   | |||||| |||||||||||| || || |||| ||| |||||||||||||    
T  21580079 tgtctcacgtacaaattgtctaaaataccaaaatagcatgttgtccctcaaaaatcgtataaaactaaaaattactcaataccataaa 21579992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 85 - 236
Target Start/End: Original strand, 37695510 - 37695661
Alignment:
Q  85 tggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatat 184  Q
    ||||||||||||| | |||||||| ||| ||||||||||||||| |||||||||||||| ||||||||  ||||||| ||||| | | ||| |||||||     
T  37695510 tggaggtaagagacaagacaaaaactgatatttttgtccctcatcaaaccacaacacaactttttgtcccacgtacaggttgtctaaaatatcaaaataa 37695609  T
Q  185 tcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
      ||| ||||  ||||||||||| || || |||| ||||||||| |||||||    
T  37695610 catttcgtcccccaaaaatcgtataaaacaaaaaattattcaatgccataaa 37695661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 31 - 236
Target Start/End: Complemental strand, 37865926 - 37865719
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | | ||||| ||||||| |||||| | |||||||| | | ||||||||||||||     
T  37865926 acaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaatctggaggcaagagacatgacaaaaactcatatttttgtccctcac 37865827  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     ||| |||||||||| ||||||||  | ||||||||||| | | |||||||||||   |||||||| ||| |||||||| || || |||| |||||||||    
T  37865826 caaatcacaacacaactttttgtcccatgtacaagttgtctaaaataccaaaatagcattttgtccctcagaaatcgtataaaacaaaaaattattcaat 37865727  T
Q  229 accataaa 236  Q
     |||||||    
T  37865726 gccataaa 37865719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 48 - 236
Target Start/End: Original strand, 33176962 - 33177152
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | || |||||||||||| ||| || |||||||||| | | ||||||||||||||  |||||||||||||| |    
T  33176962 gtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaact 33177061  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    |||||||  ||| ||||||||| | | |||||||||||   ||||||||  ||||||||||| || ||  ||| ||| ||||| |||||||    
T  33177062 ttttgtcccacgcacaagttgtctaaaataccaaaataacattttgtcccccaaaaatcgtataaaacataaaattactcaatgccataaa 33177152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 31 - 207
Target Start/End: Complemental strand, 38812693 - 38812515
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | || |||||||||||| ||| || |||||||||| | | ||||||||||||||     
T  38812693 acaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcac 38812594  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgta 207  Q
     |||||||||||||| ||||||||  ||||||||||||| | | |||||||||||   |||||| |  |||||||||||    
T  38812593 caaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgttccgcaaaaatcgta 38812515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 48 - 236
Target Start/End: Original strand, 44324272 - 44324462
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | || ||||||| |||| || |||  ||||||||| ||| ||||||||||||||  |||||||| ||||| |    
T  44324272 gtgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaaaagacgggacaaaaactgatatttttgtccctcaccaaaccacagcacaact 44324371  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    |||||||  ||||||||||||| | | |||||||||||   ||| ||||  ||||||||||| || || |||| ||||||||| |||||||    
T  44324372 ttttgtcccacgtacaagttgttttaaataccaaaatagcatttcgtcccccaaaaatcgtataaaacaaaaaattattcaatgccataaa 44324462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 51 - 207
Target Start/End: Original strand, 44649097 - 44649255
Alignment:
Q  51 tttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttt 148  Q
    ||||||||||||| |||||| ||| | || |||||||||||| |||||| |||||||||| ||| ||||||||||||||  |||||||||||||| ||||    
T  44649097 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagacaggacaaaaactgatatttttgtccctcagcaaaccacaacacaactttt 44649196  T
Q  149 tgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgta 207  Q
    ||||  | ||||||||||| | | ||| |||||||   ||||||||  |||||||||||    
T  44649197 tgtcccatgtacaagttgtctaaaatatcaaaatagcattttgtcccccaaaaatcgta 44649255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 48 - 183
Target Start/End: Original strand, 50729472 - 50729609
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggataga-caaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||||| ||| ||||||||||| ||| || | |||||||| |||||||||||||  |||  |||||||| ||||| |    
T  50729472 gtgtttgatttgtaaaactgtttcagggacagaacaaactggaggcaagggacatgacaaaaactgaaatttttgtctatcaccaaaccacagcacaact 50729571  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaata 183  Q
    |||||||| ||||||||||||| | | |||||||||||    
T  50729572 ttttgtctcacgtacaagttgtctaaaataccaaaata 50729609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 48 - 183
Target Start/End: Complemental strand, 28115407 - 28115271
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatagacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattt 146  Q
    |||||||||||||||| ||||||| |    |||||||||||||| ||| || |||| ||||||||| ||||||||||||||  |||||||||||||| ||    
T  28115407 gtgtttgatttgtaaaactgttttggtacaagacaaactggaggcaagggacaggagaaaaattgatatttttgtccctcaccaaaccacaacacaactt 28115308  T
Q  147 tttgtcttacgtacaagttgtatgatataccaaaata 183  Q
    ||||||  || |||||||||| | | |||||||||||    
T  28115307 tttgtcccacatacaagttgtctaaaataccaaaata 28115271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 31 - 236
Target Start/End: Complemental strand, 21202912 - 21202706
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | || |||||||||||| |||||| |||||||||| | | | ||||||||||||     
T  21202912 acaactctagttgtccagtgtttgatttgtaaaactgtttaaggtacaggacaaactggaggcaagagacaggacaaaaactcataattttgtccctcac 21202813  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||||||||| ||||||||  ||||||||||||| | | ||| |||||||   ||||||||  ||||||||||| || || |||| ||| ||| |    
T  21202812 caaaccacaacacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtcc-ccaaaaatcgtataaaacaaaaaattactcatt 21202714  T
Q  229 accataaa 236  Q
     |||||||    
T  21202713 gccataaa 21202706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 48 - 236
Target Start/End: Complemental strand, 24210475 - 24210284
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | || |||||||||||| ||| || |||||||||| | | ||| ||||||||||  |||||||| ||||| |    
T  24210475 gtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatattattgtccctcaccaaaccacagcacaact 24210376  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaata-ttcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    |||| ||  ||||||||||||| | | |||||||||||    |||||||| |||||||||||| || || |||| ||| |||||||||||||    
T  24210375 ttttatcccacgtacaagttgtctaaaataccaaaatagcatttttgtccctcaaaaatcgtataaaacaaaaaattactcaataccataaa 24210284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 31 - 236
Target Start/End: Original strand, 33552755 - 33552962
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | || ||||| |||| | ||| || | |||||||| | | ||||||||||||||     
T  33552755 acaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaattggatgcaagggacaagacaaaaactcatatttttgtccctcac 33552854  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||| ||||| ||||||||  ||||||||||||| | | |||||||||||   |||||||| |||||||||||| || || |||| ||| |||||    
T  33552855 caaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 33552954  T
Q  229 accataaa 236  Q
     |||||||    
T  33552955 gccataaa 33552962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 31 - 207
Target Start/End: Complemental strand, 1231484 - 1231306
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | || | |||||||||| ||||||  ||||||||| | | ||||||||||||||     
T  1231484 acaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggataaactggaggcaagagactggacaaaaactcatatttttgtccctcac 1231385  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgta 207  Q
     |||||||| ||||| ||||||||  ||||||||||||| | | ||| |||||||   |||||||| ||||||||||||    
T  1231384 aaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatatcaaaataacattttgtccctcaaaaatcgta 1231306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 48 - 236
Target Start/End: Complemental strand, 3649792 - 3649602
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggataga-caaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||||| ||| ||||||| ||| ||| || |||||||||| | ||||||||||||||||  |||||||| ||||| |    
T  3649792 gtgtttgatttgtaaaactgtttcagggacagaacaaactgaaggcaagggacaggacaaaaactaaaatttttgtccctcaccaaaccacagcacaact 3649693  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    |||||||  ||||||||||||| | | | |||||||||   ||| ||||  |||||| | || || || | || |||||||||||||||||    
T  3649692 ttttgtcccacgtacaagttgtctaaaacaccaaaataacatttcgtcccccaaaaaacatataaaacaagaaattattcaataccataaa 3649602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 48 - 236
Target Start/End: Complemental strand, 56154777 - 56154587
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | || | |||||||||| ||| || || ||||||| | | ||||||||||||||  |||||||| ||||| |    
T  56154777 gtgtttgatttgtaaaactgtttcaggtacaggaaaaactggaggcaagggacagaacaaaaactcatatttttgtccctcaccaaaccacagcacaact 56154678  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    |||||||  ||||||||||||| | | |||||||||||   |||||||| ||||||||| || || || |||| ||| ||||| |||||||    
T  56154677 ttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcatataaaacaaaaaattactcaatgccataaa 56154587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 43641202 - 43641065
Alignment:
Q  99 aggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatca 198  Q
    |||||||||| | | ||||||||||||||  |||||||| ||||| ||||||||  ||||||||||||| | | |||||||||||   |||||||| |||    
T  43641202 aggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctca 43641103  T
Q  199 aaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    ||||||||| || || |||| ||| ||||| |||||||    
T  43641102 aaaatcgtataaaacaaaaaattactcaatgccataaa 43641065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 18 - 236
Target Start/End: Original strand, 9512240 - 9512460
Alignment:
Q  18 aggatatgatatgacaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaat 115  Q
    |||| ||||||  |||| ||||||| | | |||||||||||||||| |||||| ||| | | || |||||||||| |||  | |||||||||| | | ||    
T  9512240 aggacatgatagaacaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacaagataaactggaggcaagtaacaggacaaaaactcatat 9512339  T
Q  116 ttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagacca 215  Q
    |||||||| |||  |||||||| ||||| ||||||||  ||||||||||||| | | |||||||||||   |||||||| ||||||||| || || || |    
T  9512340 ttttgtccttcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcatataaaacaa 9512439  T
Q  216 aaagttattcaataccataaa 236  Q
    ||| ||| ||||| |||||||    
T  9512440 aaaattactcaatgccataaa 9512460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 31 - 228
Target Start/End: Complemental strand, 24002512 - 24002312
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| | |||| ||| | || |||||||||||| ||| || |||||||||| | | ||||||||||||||     
T  24002512 acaactctagttgtccagtgtttgatttgtaaaacagtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcac 24002413  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaata-ttcttttgtccatcaaaaatcgtacaagaccaaaagttattcaa 227  Q
     |||||||| ||||| ||||||||  ||||||||||||| | | |||||||||||    |||||||| |||||||||||| || || |||| ||| ||||    
T  24002412 caaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcatttttgtccctcaaaaatcgtataaaacaaaaaattactcaa 24002313  T
Q  228 t 228  Q
    |    
T  24002312 t 24002312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 38 - 236
Target Start/End: Original strand, 49152020 - 49152219
Alignment:
Q  38 tagttatgctgtgtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaacca 135  Q
    ||||||| | |||||| ||||||||| |||||| ||| | | ||||||||||| | ||| || | |||||||| | | ||||||||||||||  ||||||    
T  49152020 tagttatccagtgtttaatttgtaaaactgtttcaggtacaagacaaactggatgcaagggacacgacaaaaactcatatttttgtccctcaccaaacca 49152119  T
Q  136 caacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataa 235  Q
    |||||||| ||||| ||  ||||||||||||| | | | |||||||||   ||||||||||||||||||||| || || |||| ||| ||||| ||||||    
T  49152120 caacacaactttttatcccacgtacaagttgtct-aaaaaccaaaataacattttgtccatcaaaaatcgtataaaacaaaaaattactcaatgccataa 49152218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 31 - 236
Target Start/End: Complemental strand, 6776751 - 6776544
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaact-gttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| | | |||||| |||| ||||| |||||| ||| || |||||||||| | | ||||||||||||||     
T  6776751 acaactctagttgtccagtgtttgatttgtaaaattgatttaggtatagcacaaattggaggcaagggacaggacaaaaactcatatttttgtccctcac 6776652  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||||||||| ||||||||  ||||| ||||||| | | | | ||||||||  |||||||  | |||||||||| || || |||| ||| |||||    
T  6776651 caaaccacaacacaactttttgtcccacgtaaaagttgtctaaaacatcaaaatatcattttgtctctaaaaaatcgtataaaacaaaaaattactcaat 6776552  T
Q  229 accataaa 236  Q
     |||||||    
T  6776551 gccataaa 6776544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 31 - 236
Target Start/End: Original strand, 20517935 - 20518142
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | | ||||||||||||| |||||| |||||||||| | | ||||||||||||||     
T  20517935 acaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaagagacaggacaaaaagtcatatttttgtccctcac 20518034  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     ||| |||| || || || |||||  ||||||||||||| | | |||||||||||   |||||||| ||||||||  || || || |||| ||| |||||    
T  20518035 caaatcacagcataacttcttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaattctataaaacaaaaaattactcaat 20518134  T
Q  229 accataaa 236  Q
     |||||||    
T  20518135 gccataaa 20518142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 31 - 279
Target Start/End: Complemental strand, 36497390 - 36497139
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | || |||||||||||  |||||| |||||||||| | | ||||||||||||||     
T  36497390 acaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagacaagagacaggacaaaaactcatatttttgtccctcac 36497291  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||| ||||| ||||||||  || |||||||||| | | ||| |||||||   || ||||| |||||||||||| || |  |||| ||| |||||    
T  36497290 caaaccacatcacaactttttgtccaacatacaagttgtctaaaatatcaaaatagcattctgtccctcaaaaatcgtataaaataaaaaattactcaat 36497191  T
Q  229 accataaa-tgtttggcctgtgttgttatgacttgctttgtgctattatgtc 279  Q
     | ||||| | |||| ||||||||||| || ||||  |||| || |||||||    
T  36497190 gctataaattttttgtcctgtgttgttctgccttgtgttgtactgttatgtc 36497139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 31 - 236
Target Start/End: Original strand, 36743601 - 36743808
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||| ||||||| |||||| ||| | || |||||||||||| ||| || | |||||||||| | ||||||||||||||     
T  36743601 acaactctagttgttcagtgtttgaattgtaaaactgtttcaggtacaggacaaactggaggcaagggacatgacaaaaattcatatttttgtccctcac 36743700  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||| ||| ||||| ||||||||  ||||||||||||| | | |||||||||||   |||||||| |||||||| ||| || || | || ||| |||||    
T  36743701 caaactacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaattgtataaaacaacaaattactcaat 36743800  T
Q  229 accataaa 236  Q
     |||||||    
T  36743801 gccataaa 36743808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 31 - 236
Target Start/End: Original strand, 38486170 - 38486377
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | || | |||||||||| ||| || | |||||||| | | ||||||||||||||     
T  38486170 acaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggataaactggaggcaagggacatgacaaaaactcatatttttgtccctcac 38486269  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||| ||||| ||||||||| ||||||||||||| | | ||| |||||||   |||||||| |||||||| ||| || || |||| ||| ||||     
T  38486270 caaaccacagcacaactttttgtctaacgtacaagttgtctaaaatatcaaaatagcattttgtccctcaaaaatagtataaaacaaaaaattactcaac 38486369  T
Q  229 accataaa 236  Q
     |||||||    
T  38486370 gccataaa 38486377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 31 - 236
Target Start/End: Original strand, 46680423 - 46680630
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | || |||||||||||| ||| || |||||||||| | | |||||||||||| |     
T  46680423 acaattctagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtcccttac 46680522  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||| ||||| ||||||||| |||||||| |||| | | |||||| ||||   |||||||| | ||||||| || || || |||| ||| |||||    
T  46680523 caaaccacagcacaactttttgtctcacgtacaaattgtctaaaataccataatagcattttgtccctaaaaaatcatataaaacaaaaaattactcaat 46680622  T
Q  229 accataaa 236  Q
     |||||||    
T  46680623 gccataaa 46680630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 81 - 236
Target Start/End: Complemental strand, 55594006 - 55593851
Alignment:
Q  81 aaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaa 180  Q
    |||||||||| ||| || |||||||||| | | ||||| ||||||||  |||||||| ||||| ||||| ||  ||||||||||||| | | ||||||||    
T  55594006 aaactggaggcaagggacaggacaaaaactcatattttagtccctcaccaaaccacagcacaactttttatcccacgtacaagttgtctaaaataccaaa 55593907  T
Q  181 atattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    |||   |||||||| |||||||||||| || || |||| ||| ||||| |||||||    
T  55593906 ataacattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaa 55593851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 31 - 207
Target Start/End: Complemental strand, 36886105 - 36885927
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | | ||||||||||||| ||| || |||||||||| | | ||||||||||||||     
T  36886105 acaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcac 36886006  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgta 207  Q
     |||||||| ||||| ||||| ||  |||||||| |||| | | ||||| |||||   |||||||| ||||||||||||    
T  36886005 caaaccacagcacaactttttatcccacgtacaaattgtctaaaatacctaaatagcattttgtccctcaaaaatcgta 36885927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 49 - 236
Target Start/End: Complemental strand, 9948084 - 9947895
Alignment:
Q  49 tgtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattt 146  Q
    ||||||||||||||| |||||| ||| | | |||||||| |||| |||||| | |||||||| | ||||| || ||||||| |||||||||  |||| ||    
T  9948084 tgtttgatttgtaaaactgtttaaggaacatgacaaacttgaggcaagagacatgacaaaaactaaaattcttatccctcactaaaccacattacaactt 9947985  T
Q  147 tttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    ||||||| ||||||||||| |   | ||||||||||| || ||||||||  ||||| | || || ||||||| ||||| |||| ||||||    
T  9947984 tttgtctcacgtacaagttattcaaaataccaaaatagtcctttgtccacaaaaaaccatataaaaccaaaatttatttaatatcataaa 9947895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 31 - 205
Target Start/End: Complemental strand, 4325964 - 4325788
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | | ||||||||||||| ||| || |||| ||||| | | ||||||||| ||||     
T  4325964 acaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaagggacaggagaaaaactcatatttttgtctctcac 4325865  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcg 205  Q
     ||||| |||||||| ||||||||  ||||||||||||| | | |||||||||||   ||||||||  |||||||||    
T  4325864 aaaaccgcaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtcccccaaaaatcg 4325788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 49 - 207
Target Start/End: Complemental strand, 52319478 - 52319318
Alignment:
Q  49 tgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattt 146  Q
    ||||||||||||||| |||||| ||| | || |||||||||||| ||| || ||||| |||| | | ||||||||||||||  |||||||| ||||| ||    
T  52319478 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacgaaaactcatatttttgtccctcaccaaaccacagcacaactt 52319379  T
Q  147 tttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgta 207  Q
    ||||||  ||||||||||||| | | ||  |||||||   |||||||| ||||||||||||    
T  52319378 tttgtcccacgtacaagttgtctaaaatgtcaaaataacattttgtccctcaaaaatcgta 52319318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 241
Target Start/End: Complemental strand, 21098637 - 21098494
Alignment:
Q  99 aggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccat-c 197  Q
    |||||||||||||||||| ||||| |||| |||||||||||| || ||||||||  ||||| || |||| | | |||| ||||||   |||| |||||      
T  21098637 aggacaaaaattgaaattcttgtctctcactaaaccacaacataactttttgtcgcacgtaaaatttgtctaaaatactaaaataacattttctccataa 21098538  T
Q  198 aaaaatcgtacaagaccaaaagttattcaataccataaatgttt 241  Q
    ||||||||||  ||||||||||||||| |||| |||||| ||||    
T  21098537 aaaaatcgtattagaccaaaagttatttaatatcataaaagttt 21098494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 321
Target Start/End: Complemental strand, 37932008 - 37931801
Alignment:
Q  114 atttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagac 213  Q
    ||||||||||||||  |||||||||||||| |||||||| ||| |||||||||| | | ||  |||||||   ||| ||||  ||||||| ||| || ||    
T  37932008 atttttgtccctcaccaaaccacaacacaactttttgtcctacatacaagttgtttaaaatgtcaaaatagcatttcgtcccccaaaaattgtataaaac 37931909  T
Q  214 caaaagttattcaataccataaatgtttggcctgtgttgttatgacttgctttgtgctattatgtcttgtgttgttatgtccgatacttattgtttagca 313  Q
     |||| ||||||||| |||||||   ||| | |||| |||| || ||||  || || |||||||||||||  ||||||||||  |||||| ||||| |||    
T  37931908 gaaaaattattcaatgccataaaaagttgtcttgtgctgttctgccttgtattatgttattatgtcttgtactgttatgtccagtacttactgttttgca 37931809  T
Q  314 aatcaaac 321  Q
    || |||||    
T  37931808 aaccaaac 37931801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 236
Target Start/End: Complemental strand, 41712020 - 41711813
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | || |||||||| ||| ||| || |||||||| | | | ||||||||||||||     
T  41712020 acaactctagttgtccagtgtttgatttgtaaagctgtttcaggtacaggacaaactgaaggcaagggacaggacaaagactcatatttttgtccctcac 41711921  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     ||||||||  |||| ||||||||| ||||||| ||||| | | |||||||||||   ||| ||||  |||| |||||| || || |||| |||||||||    
T  41711920 caaaccacagtacaactttttgtctcacgtacaggttgtctaaaataccaaaatagcatttcgtcccccaaatatcgtataaaacaaaaaattattcaat 41711821  T
Q  229 accataaa 236  Q
    | ||||||    
T  41711820 agcataaa 41711813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 31 - 183
Target Start/End: Complemental strand, 20694544 - 20694390
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||| ||||||||| |||||||||| | || |||||||| ||| ||  || |||||||||| | | ||||||||||||||     
T  20694544 acaactctagttgtccagtgtttaatttgtaaaactgttttaggtacaggacaaactgaaggcaaaggacaggacaaaaactcatatttttgtccctcac 20694445  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaata 183  Q
     |||||||||| ||| ||||||||  ||||||||||||| | | |||||||||||    
T  20694444 caaaccacaacgcaactttttgtccaacgtacaagttgtctaaaataccaaaata 20694390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 78 - 228
Target Start/End: Complemental strand, 54543113 - 54542964
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatacc 177  Q
    |||||| |||||| ||| || |||||||||| | | ||||||||||||||  |||||| | ||||| |||| |||  ||||||||||||| | | |||||    
T  54543113 gacaaattggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccatagcacaactttt-gtcccacgtacaagttgtctaaaatacc 54543015  T
Q  178 aaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
    |||||||  |||||||| |||||||||||| || || |||| ||| |||||    
T  54543014 aaaatatcattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 54542964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 167
Target Start/End: Complemental strand, 26083495 - 26083374
Alignment:
Q  48 gtgtttgatttgtaaact-gttttagggataga-caaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| | |||| ||||| ||| ||||||||||| ||| || | |||||||| ||||||||||||||||||  |||||||| || || |    
T  26083495 gtgtttgatttgtaaaattgtttcagggacagaacaaactggaggcaagggacatgacaaaaactgaaatttttgtccctcaccaaaccacagcataact 26083396  T
Q  146 ttttgtcttacgtacaagttgt 167  Q
    |||||||  || ||||||||||    
T  26083395 ttttgtcccacttacaagttgt 26083374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 79 - 159
Target Start/End: Complemental strand, 52673934 - 52673854
Alignment:
Q  79 acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgta 159  Q
    |||||||||||  ||| || | ||||||||  ||||||||||||||||| |||||| |||||||||||||||||| |||||    
T  52673934 acaaactggagtcaagggacatgacaaaaacagaaatttttgtccctcactaaacctcaacacaattttttgtctcacgta 52673854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 114 - 321
Target Start/End: Original strand, 7554955 - 7555162
Alignment:
Q  114 atttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagac 213  Q
    |||||||||| ||| ||||||| ||||||| ||||||||| ||||||||||||| | | |  ||||||||   ||| | ||  ||||||||||| || ||    
T  7554955 atttttgtccttcactaaaccataacacaactttttgtctcacgtacaagttgtctaaaaatccaaaatagcatttcggcctccaaaaatcgtataaaac 7555054  T
Q  214 caaaagttattcaataccataaatgtttggcctgtgttgttatgacttgctttgtgctattatgtcttgtgttgttatgtccgatacttattgtttagca 313  Q
     |||| ||||||||| |||||||  |||| | |||| |||| || ||||  ||||| | || ||||||||  ||||| |||| ||||||| | ||| |||    
T  7555055 aaaaaattattcaatgccataaaaatttgtcgtgtgatgttctgtcttgtgttgtgttgttttgtcttgtactgttaagtccaatacttactattttgca 7555154  T
Q  314 aatcaaac 321  Q
    || |||||    
T  7555155 aaccaaac 7555162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 48 - 321
Target Start/End: Complemental strand, 9807311 - 9807037
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | | |||||||| || | ||  || |||||||||| | || ||||||||| |||  ||||||||  |||| |    
T  9807311 gtgtttgatttgtaaaactgtttcaggtacaagacaaactagatgcaatggacaggacaaaaactcaactttttgtcc-tcaccaaaccacagtacaact 9807213  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaatgtttggcc 245  Q
    ||||||| |||||||||||||| | | |||||||||||   ||| ||||  ||||||||||| || ||  ||| ||||||||| ||||| |  |||| ||    
T  9807212 ttttgtcctacgtacaagttgtctaaaataccaaaatagcatttcgtcctccaaaaatcgtataaaacataaaattattcaatgccatacaaatttgtcc 9807113  T
Q  246 tgtgttgttatgacttgctttgtgctattatgtcttgtgttgttatgtccgatacttattgtttagcaaatcaaac 321  Q
    |||| ||||||| ||||  ||||||| || | ||||||  |||| |||||  |||||| | ||| ||||| |||||    
T  9807112 tgtgctgttatgccttgtgttgtgctgttctatcttgtactgttctgtccagtacttactattttgcaaaccaaac 9807037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 49 - 254
Target Start/End: Original strand, 45577619 - 45577828
Alignment:
Q  49 tgtttgatttgtaaa--ctgttttagggata-gacaaactggaggtaagagagaggacaaaaat---tgaaatttttgtccctcattaaaccacaacaca 142  Q
    |||||||||||||||  |||||||| ||| | ||||||||||||| |||||| | ||||||||    ||||||| |||| ||||  ||||||||||||||    
T  45577619 tgtttgatttgtaaaagctgttttatggacatgacaaactggaggcaagagacatgacaaaaaaaaatgaaattcttgttcctcgctaaaccacaacaca 45577718  T
Q  143 attttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaatgtttg 242  Q
    | ||||||||  |||| |||||||| | | ||||||||||    |||||||||  |||||| |   |||||  ||| |||||||||||||||||  ||||    
T  45577719 actttttgtcccacgtgcaagttgtctaaaataccaaaatgacattttgtccacaaaaaattgattaagac--aaaattattcaataccataaaactttg 45577816  T
Q  243 gcctgtgttgtt 254  Q
     | |||||||||    
T  45577817 tcatgtgttgtt 45577828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 48 - 236
Target Start/End: Complemental strand, 11056198 - 11056008
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | || |||||||||||| ||| || | |||||||| ||| |||||||||||| |  |||||||||||||| |    
T  11056198 gtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaagacaaaaactgatatttttgtcccttaccaaaccacaacacaact 11056099  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    || ||||  | |||||  ||||   | |||||||||||   ||| || | |||||||||||| || || |||| ||||||||| |||||||    
T  11056098 ttatgtcccatgtacagattgtcaaaaataccaaaataacatttcgtgcctcaaaaatcgtataaaacaaaaaattattcaatgccataaa 11056008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 81 - 166
Target Start/End: Complemental strand, 16320640 - 16320555
Alignment:
Q  81 aaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttg 166  Q
    |||||||||| ||| || |||| ||||| ||| ||||||||||||||  |||||||||||||| ||||||||  ||||||| ||||    
T  16320640 aaactggaggcaagggacaggataaaaactgatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaggttg 16320555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 99 - 183
Target Start/End: Complemental strand, 23328022 - 23327937
Alignment:
Q  99 aggacaaaaattgaaatttttgtccctcattaaaccacaacacaa-ttttttgtcttacgtacaagttgtatgatataccaaaata 183  Q
    |||||||||| | | ||||||||||||||  |||||||||||||| |||||||||  ||||||||||||| | | |||||||||||    
T  23328022 aggacaaaaactcatatttttgtccctcagcaaaccacaacacaacttttttgtcccacgtacaagttgtctaaaataccaaaata 23327937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 157 - 321
Target Start/End: Complemental strand, 985327 - 985164
Alignment:
Q  157 gtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaatgtttggcctgtgttgttat 256  Q
    ||||||||||| | | ||| ||||||| ||||||||||| |||||||| || |||||||||| |||||||| ||||||||  |||| | | || |||| |    
T  985327 gtacaagttgtttaaaatatcaaaatagtcttttgtccagcaaaaatcatataagaccaaaaattattcaa-accataaaaatttgtcttatgatgtttt 985229  T
Q  257 gacttgctttgtgctattatgtcttgtgttgttatgtccgatacttattgtttagcaaatcaaac 321  Q
    | ||||  ||||  | || |||||||||||||| | ||  ||||||| ||||||  |||||||||    
T  985228 gtcttgtgttgtattgttttgtcttgtgttgttctatctaatacttactgtttaataaatcaaac 985164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 99 - 167
Target Start/End: Original strand, 25978594 - 25978662
Alignment:
Q  99 aggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgt 167  Q
    |||||||||| ||||||||||||||||||  |||||| | ||||| ||||||||| || ||||||||||    
T  25978594 aggacaaaaactgaaatttttgtccctcaccaaaccatatcacaactttttgtctcacttacaagttgt 25978662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 18 - 183
Target Start/End: Original strand, 2629851 - 2630018
Alignment:
Q  18 aggatatgatatgacaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaat 115  Q
    |||| |||| || |||| ||||||| | | |||||||||||||||| |||||| ||| | || ||||||| |||| ||  || | |||||||| | | ||    
T  2629851 aggacatgacataacaactctagttgtcccgtgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaaaggacatgacaaaaactcatat 2629950  T
Q  116 ttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaata 183  Q
    ||||||||||||  | |||| | ||||| ||||||||| ||||||||||||| | | |||||||||||    
T  2629951 ttttgtccctcaccagaccaaatcacaactttttgtctcacgtacaagttgtctaaaataccaaaata 2630018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 18 - 183
Target Start/End: Complemental strand, 32181449 - 32181282
Alignment:
Q  18 aggatatgatatgacaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaat 115  Q
    |||||| || ||||||| | ||||| | | |||||||||||||||| |||||| | | | || ||||||| || | ||| || |||||||||| | | ||    
T  32181449 aggataggacatgacaactttagttgtccagtgtttgatttgtaaaactgtttcaagtacaggacaaactagatgcaagggacaggacaaaaactcatat 32181350  T
Q  116 ttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaata 183  Q
    ||||||||||||  ||||||||  |||| ||||||||  ||||||||||||| | | |||||||||||    
T  32181349 ttttgtccctcaccaaaccacagtacaactttttgtcccacgtacaagttgtctaaaataccaaaata 32181282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 101 - 232
Target Start/End: Complemental strand, 43739562 - 43739431
Alignment:
Q  101 gacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaa 200  Q
    |||||||| ||||||| ||||||||||  ||||||||||||||  |||||||  || |||||||||| | | |||  ||||||   |||| ||||  |||    
T  43739562 gacaaaaactgaaattattgtccctcaccaaaccacaacacaacattttgtcccacatacaagttgtctaaaatattaaaataacattttatccacaaaa 43739463  T
Q  201 aatcgtacaagaccaaaagttattcaatacca 232  Q
    ||| ||| |||||||||| ||||| |||||||    
T  43739462 aattgtataagaccaaaaattatttaatacca 43739431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 112 - 203
Target Start/End: Complemental strand, 43893667 - 43893576
Alignment:
Q  112 aaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaat 203  Q
    |||| ||||||| ||| ||||||||||||||||||||||||| |||| || ||| | | | |||| |||||| | ||||||||| |||||||    
T  43893667 aaatatttgtccttcactaaaccacaacacaattttttgtctcacgtgcaggttatctaaaatacaaaaatagttttttgtccaccaaaaat 43893576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 236
Target Start/End: Complemental strand, 29616289 - 29616136
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatacc 177  Q
    ||||||||||||| ||| || |||||||||| | | |||||||||||| |     ||||| ||||| ||||||||  |||||||| |||| | | |||||    
T  29616289 gacaaactggaggcaagggacaggacaaaaactcatatttttgtccctga-----ccacagcacaactttttgtcccacgtacaaattgtctaaaatacc 29616195  T
Q  178 aaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    ||||||   |||||||| | |||||||||| || || |||| ||| ||||| |||||||    
T  29616194 aaaataacattttgtcccttaaaaatcgtataaaacaaaaaattactcaatgccataaa 29616136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 227
Target Start/End: Complemental strand, 41262072 - 41261974
Alignment:
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaa 227  Q
    |||||||| ||||||| |||||||| || |||||||||| | | ||| |||| || |||||||||||  | ||| |||| |||||||||| ||||||||    
T  41262072 taaaccaccacacaatgttttgtctcacctacaagttgtctaaaatagcaaattagtcttttgtccacaagaaaacgtataagaccaaaacttattcaa 41261974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 195 - 236
Target Start/End: Original strand, 47667128 - 47667169
Alignment:
Q  195 atcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    |||||||||| ||||||||||||||||||||||||| |||||    
T  47667128 atcaaaaatcatacaagaccaaaagttattcaatactataaa 47667169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 117 - 184
Target Start/End: Complemental strand, 38520584 - 38520517
Alignment:
Q  117 tttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatat 184  Q
    |||||||||||  |||||||| || |||||||||||  ||| ||||||||||| | ||||||||||||    
T  38520584 tttgtccctcaccaaaccacagcataattttttgtcccacgcacaagttgtataaaataccaaaatat 38520517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 143
Target Start/End: Complemental strand, 42870157 - 42870030
Alignment:
Q  18 aggatatgatatgacaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaat 115  Q
    |||| |||| || |||| ||||||| | | |||||||||||||||| ||||||  || | || ||||||||| || |||||| |||||||||| | | ||    
T  42870157 aggacatgacataacaactctagttgtccggtgtttgatttgtaaaactgtttctggtacaggacaaactgggggcaagagacaggacaaaaactcatat 42870058  T
Q  116 ttttgtccctcattaaaccacaacacaa 143  Q
    ||||||||||||  |||||||| |||||    
T  42870057 ttttgtccctcaccaaaccacagcacaa 42870030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 78 - 152
Target Start/End: Complemental strand, 42772912 - 42772838
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtc 152  Q
    |||||||| |||| |||||| | |||||||| | | |||||||||| |||  |||||||||||||| ||||||||    
T  42772912 gacaaacttgaggcaagagacaagacaaaaactcatatttttgtccttcaccaaaccacaacacaactttttgtc 42772838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 48 - 152
Target Start/End: Original strand, 47361344 - 47361449
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | || |||||| ||||| ||| || | ||||||| || | ||||||||||||||  |||||||||||||| |    
T  47361344 gtgtttgatttgtaaaactgtttcaggtacaggacaaaccggaggcaagggacaagacaaaa-ttcatatttttgtccctcaccaaaccacaacacaact 47361442  T
Q  146 ttttgtc 152  Q
    |||||||    
T  47361443 ttttgtc 47361449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 101 - 165
Target Start/End: Complemental strand, 10587136 - 10587072
Alignment:
Q  101 gacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagtt 165  Q
    |||||||| ||||||| |||||| ||||||||||||| || |||| ||||||  ||||| |||||    
T  10587136 gacaaaaactgaaattattgtccttcattaaaccacatcataattatttgtcccacgtataagtt 10587072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 39 - 184
Target Start/End: Complemental strand, 30942954 - 30942806
Alignment:
Q  39 agttatgctgtgtttgatttgtaaa-ctgttttagggataga-caaactggaggtaagagagaggacaaaaat-tgaaatttttgtccctcattaaacca 135  Q
    |||||| | ||||||||||| |||| |||||| ||||| ||| |||| |||||| ||||||  |||||||||  |||||||| |||| ||||  ||||||    
T  30942954 agttattcagtgtttgatttataaaactgtttcagggacagaacaaattggaggcaagagacgggacaaaaaactgaaatttctgtctctcaccaaacca 30942855  T
Q  136 caacacaattttttgtcttacgtacaagttgtatgatataccaaaatat 184  Q
    ||||||||  ||||| || || || ||||||| | | | ||||||||||    
T  30942854 caacacaacattttgcctcacatataagttgtctaaaacaccaaaatat 30942806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 99 - 235
Target Start/End: Original strand, 41897341 - 41897477
Alignment:
Q  99 aggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatca 198  Q
    ||||||||||   |||||| ||||||||  ||||| ||| ||||| ||||| || |||||| ||||| ||| | |||| |||||| | |||| ||||  |    
T  41897341 aggacaaaaacaaaaatttgtgtccctcgataaacaacagcacaactttttatcctacgtaaaagttatataaaatacaaaaatagttttttatccacaa 41897440  T
Q  199 aaaatcgtacaagaccaaaagttattcaataccataa 235  Q
    ||||| ||| |  | ||||| ||||||||||||||||    
T  41897441 aaaattgtatacaatcaaaaattattcaataccataa 41897477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 75; Significance: 3e-34; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 48 - 324
Target Start/End: Original strand, 1586 - 1864
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| | |||||| |||||||||||| ||| || | |||||||| ||||||||||||||||||  |||||||||||||| |    
T  1586 gtgtttgatttgtaaaactgtttcaaggataggacaaactggaggcaagggacaagacaaaaactgaaatttttgtccctcaccaaaccacaacacaact 1685  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaatgtttggcc 245  Q
    |||||||  ||||||||||||| | | | |||||||||   ||| |||| |||||| || || || || |||| |||||||||||||||||  ||||  |    
T  1686 ttttgtcccacgtacaagttgtctaaaaaaccaaaatagcatttcgtccctcaaaagtcatataaaacaaaaaattattcaataccataaaaatttgttc 1785  T
Q  246 tgtgttgttatgacttgctttgtgctattatgtcttgtgttgttatgtccgatacttattgtttagcaaatcaaacgca 324  Q
    ||||||||| |  ||||  ||||||| || ||  ||||   ||| ||||  ||||||||||||| ||||||||||||||    
T  1786 tgtgttgttctctcttgtgttgtgctgttttgctttgtacagttctgtcaaatacttattgttttgcaaatcaaacgca 1864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 75; Significance: 3e-34; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 48 - 236
Target Start/End: Complemental strand, 6386729 - 6386539
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    ||||||||||| |||| |||||| ||| |||| ||||||||||||||| ||| |||||||||| | | ||||||||||||||  |||||||||||||| |    
T  6386729 gtgtttgatttataaaactgtttcaggtataggacaaactggaggtaaaagataggacaaaaactcatatttttgtccctcaccaaaccacaacacaact 6386630  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    |||||||| ||||||||||||| | | |||||||||||   |||||||| |||||||||||| || || |||| ||| ||||| |||||||    
T  6386629 ttttgtctcacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaa 6386539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 31 - 236
Target Start/End: Original strand, 29563161 - 29563368
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||||| | |||||||||||||||| |||||| ||| | || ||||||| |||| ||| || |||||||||| | | ||||||||||||||     
T  29563161 acaactctagttatccagtgtttgatttgtaaaactgtttcaggtacaggacaaactcgaggcaagggacaggacaaaaactcatatttttgtccctcac 29563260  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||||||||| ||||||||  ||||||||||||| | | ||||||||||| | |||||||| |||||||||||| || || |||| ||| |||||    
T  29563261 caaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagtattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 29563360  T
Q  229 accataaa 236  Q
     |||||||    
T  29563361 gccataaa 29563368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 48 - 324
Target Start/End: Original strand, 37618344 - 37618622
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | || ||||| |||||| ||  || |||||||||| ||| ||||||||||||||  |||||||||||||| |    
T  37618344 gtgtttgatttgtaaaactgtttcaggtacaggacaaattggaggcaaaggacaggacaaaaactgatatttttgtccctcaccaaaccacaacacaact 37618443  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaatgtttggcc 245  Q
    |||||||| ||||||||||||| | | |||||||||||   ||| ||||  ||||||| ||| || || |||| ||||||||| |||||||  |||| |     
T  37618444 ttttgtctcacgtacaagttgttttaaataccaaaatagcatttcgtcccccaaaaattgtataaaacaaaaaattattcaatgccataaacatttgtca 37618543  T
Q  246 tgtgttgttatgacttgctttgtgctattatgtcttgtgttgttatgtccgatacttattgtttagcaaatcaaacgca 324  Q
    |||| |||| || ||||  ||||||| |||||| ||||  ||||||||||  ||||||  |||| ||||| ||||||||    
T  37618544 tgtgctgttctgccttgtgttgtgctgttatgttttgtactgttatgtccagtacttaccgttttgcaaaccaaacgca 37618622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 48 - 324
Target Start/End: Complemental strand, 15001619 - 15001341
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||||| || |||||||||||| || ||| || ||||||| ||||||||||||||||||  |||||||||||||| |    
T  15001619 gtgtttgatttgtaaaactgtttcagggacaggacaaactggaggcaatagacagaacaaaaactgaaatttttgtccctcaccaaaccacaacacaact 15001520  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccat-aaatgtttggc 244  Q
    |||||||  ||||||||||| | | | |||||||||||  | |||||||  |||||||| || || ||  ||| |||||||||||||| |||  |||  |    
T  15001519 ttttgtcccacgtacaagttatctaaaataccaaaata-gcatttgtcccccaaaaatcatataaaacagaaaattattcaataccataaaaaatttatc 15001421  T
Q  245 ctgtgttgttatgacttgctttgtgctattatgtcttgtgttgttatgtccgatacttattgtttagcaaatcaaacgca 324  Q
     ||||||||| || ||||  ||||||| || ||||||||  |||| |||||  |||||| ||||| ||||| ||||||||    
T  15001420 ttgtgttgttctgccttgtgttgtgctgttctgtcttgtactgttctgtccagtacttactgttttgcaaaccaaacgca 15001341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 31 - 321
Target Start/End: Original strand, 31513518 - 31513811
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaact-gttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||||| | |||||||||||||||| | |||| ||| | | ||||||||||||| ||| || |||||||||| | | ||||||||||||||     
T  31513518 acaactctagttatccagtgtttgatttgtaaaattgtttcaggtagatgacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcac 31513617  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||| ||||| |||||||| || ||||||||||| | | |||||||||||   |||||||| |||||||||||| || || |||| ||| |||||    
T  31513618 caaaccacagcacaactttttgtcctaggtacaagttgtctaaaataccaaaatagcattttgtccttcaaaaatcgtataaaacaaaaaattactcaat 31513717  T
Q  229 accat-aaatgtttggcctgtgttgttatgacttgctttgtgctattatgtcttgtgttgttatgtccgatacttattgtttagcaaatcaaac 321  Q
     |||| |||  |||| | ||||||||| || ||||  |||| || || | ||||||  |||| ||||| ||||||| ||||| ||||| |||||    
T  31513718 gccataaaaaatttgtcatgtgttgttctgccttgtgttgtactgttctatcttgtactgttttgtccaatacttactgttttgcaaaccaaac 31513811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 49 - 262
Target Start/End: Original strand, 29611008 - 29611223
Alignment:
Q  49 tgtttgatttgtaaa-ctgttttagggataga-caaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattt 146  Q
    ||||||||||||||| |||||| ||||| ||| ||||||||||| ||| || |||||||||| |||||||||||||||||   |||||||||||||| ||    
T  29611008 tgtttgatttgtaaaactgtttcagggacagaacaaactggaggcaagggacaggacaaaaactgaaatttttgtccctcgccaaaccacaacacaactt 29611107  T
Q  147 tttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaatgtttggcct 246  Q
    ||||||  ||||| ||||||| | | | |||||||||   ||| ||||  |||||| | || || || | || |||||||||||||||||  |||| |||    
T  29611108 tttgtcccacgtaaaagttgtctaaaacaccaaaatagcatttcgtcccccaaaaagcatataaaacaagaaattattcaataccataaaaatttgtcct 29611207  T
Q  247 gtgttgttatgacttg 262  Q
    ||||||||||| ||||    
T  29611208 gtgttgttatgccttg 29611223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 48 - 236
Target Start/End: Original strand, 8673007 - 8673197
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | | ||||||||||||| ||| || |||||||||| | | ||||||||||||||  |||||||||||||| |    
T  8673007 gtgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaact 8673106  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    |||||||  ||||||||||||| | | |||||||||||   |||||||| ||||||||| || || || |||| ||| ||||| |||||||    
T  8673107 ttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcatataaaacaaaaaattactcaatgccataaa 8673197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 31 - 254
Target Start/End: Complemental strand, 10467234 - 10467009
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||||||| | || |||||||||||| |||||| | |||||||| ||| |||||||| |||||     
T  10467234 acaactctagttgtccagtgtttgatttgtaaaactgttttaggtacaggacaaactggaggcaagagacaagacaaaaactgatatttttgttcctcag 10467135  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||||||||| ||||||||  ||||||||||||| | | ||| |||||||   ||||||||  ||||||||||| || || |||| |||||| ||    
T  10467134 caaaccacaacacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtcccccaaaaatcgtataaaacaaaaaattattctat 10467035  T
Q  229 accataaatgtttggcctgtgttgtt 254  Q
      ||||||  |||| |||||| ||||    
T  10467034 gtcataaaaatttgtcctgtgctgtt 10467009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 48 - 254
Target Start/End: Original strand, 7591399 - 7591607
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | || |||||||||||| |||||| |||||||||| ||| |||||||| |||||  |||||||||||||| |    
T  7591399 gtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagacaggacaaaaactgatatttttgtgcctcagcaaaccacaacacaact 7591498  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaatgtttggcc 245  Q
    |||||||  ||||| ||||||| | | ||| |||||||   ||||||||  ||||||||||| || || |||| |||||||||  ||||||  |||| ||    
T  7591499 ttttgtcacacgtataagttgtctaaaatatcaaaatagcattttgtcccccaaaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgtcc 7591598  T
Q  246 tgtgttgtt 254  Q
    |||| ||||    
T  7591599 tgtgctgtt 7591607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 31 - 236
Target Start/End: Complemental strand, 34063298 - 34063091
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| || ||| ||| | || |||||||||||| ||| || |||||||||| | | |||||||||||||      
T  34063298 acaactctagttgtccagtgtttgatttgtaaaactctttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcgc 34063199  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||| ||||| ||||||||  ||||||||||||| | | |||||||||||   |||||||| |||||||||||| || || |||| |||||||||    
T  34063198 caaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattattcaat 34063099  T
Q  229 accataaa 236  Q
     |||||||    
T  34063098 gccataaa 34063091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 31 - 321
Target Start/End: Original strand, 3251591 - 3251884
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | ||||||||||| |||| |||||| ||| | || |||||||||||| ||| || || ||||||| | | ||||||||||||||     
T  3251591 acaactctagttgtccagtgtttgatttataaaactgtttcaggtacaggacaaactggaggcaagcgacagaacaaaaacttatatttttgtccctcac 3251690  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||| ||||| ||||| || |||||||||||||| | | |||||||||||   |||||||| |||||||||||| || || |||| ||| |||||    
T  3251691 caaaccacatcacaactttttatcctacgtacaagttgtctaaaataccaaaataacattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 3251790  T
Q  229 accat-aaatgtttggcctgtgttgttatgacttgctttgtgctattatgtcttgtgttgttatgtccgatacttattgtttagcaaatcaaac 321  Q
     |||| |||  |||| ||| || |||| || ||||  |||| || || | |||| | ||||| ||||||||||||| ||||| ||||| |||||    
T  3251791 gccataaaaaatttgtcctatgctgttctgccttgtgttgtactgttctatcttatattgttctgtccgatacttactgttttgcaaaccaaac 3251884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 78 - 254
Target Start/End: Complemental strand, 41548739 - 41548563
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatacc 177  Q
    ||||||||||||| |||||| |||||||||| ||| |||||||| |||||  | |||||||||||| ||||||||  ||||||||||||| | | ||| |    
T  41548739 gacaaactggaggcaagagacaggacaaaaactgatatttttgtacctcagcagaccacaacacaactttttgtcccacgtacaagttgtctaaaatatc 41548640  T
Q  178 aaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaatgtttggcctgtgttgtt 254  Q
    ||||||   ||||||||  ||||||||||| || || |||| |||||||||  ||||||  |||| |||||| ||||    
T  41548639 aaaataacattttgtcccccaaaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgtcctgtgatgtt 41548563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 31 - 236
Target Start/End: Complemental strand, 25478413 - 25478206
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||| ||||||||| |||||| ||| | || |||||||||||  ||| || |||| ||||| | | |||||||||||||||    
T  25478413 acaactctagttgtccagtgtttaatttgtaaaactgtttcaggtacaggacaaactggagacaagggacaggaaaaaaactcatatttttgtccctcat 25478314  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     ||| |||| ||||| |||||||| |||||||||||||| | | ||||||||||| | |||||||| | |||||||||| || || |||| ||| |||||    
T  25478313 caaatcacagcacaactttttgtcctacgtacaagttgtctaaaataccaaaatagtattttgtccctaaaaaatcgtataaaacaaaaaattactcaat 25478214  T
Q  229 accataaa 236  Q
     |||||||    
T  25478213 gccataaa 25478206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 31 - 236
Target Start/End: Complemental strand, 41709947 - 41709740
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | || |||||||||||| ||  || |||||||||| | | ||||||||||||||     
T  41709947 acaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaatgacaggacaaaaactcatatttttgtccctcac 41709848  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||| ||||| ||||||||  ||||||||||| | | | |||||||||||   |||||||| |||||||||||| || || |||| ||| |||||    
T  41709847 caaaccacagcacaactttttgtccaacgtacaagttatctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 41709748  T
Q  229 accataaa 236  Q
     |||||||    
T  41709747 gccataaa 41709740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 31 - 207
Target Start/End: Complemental strand, 4052650 - 4052472
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | || ||||| |||||| ||| || |||||||||| | | ||||||||||||||     
T  4052650 acaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaattggaggcaagggacaggacaaaaactcatatttttgtccctcac 4052551  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgta 207  Q
     |||||||| ||||| ||||||||  ||||||||||||| | | |||||||||||   |||||||| ||||||||||||    
T  4052550 caaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgta 4052472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 49 - 242
Target Start/End: Original strand, 16595103 - 16595297
Alignment:
Q  49 tgtttgatttgtaaactgttttagggataga-caaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatttt 147  Q
    ||||||||||||||| |||||  |||| ||| ||||||| ||| ||| || ||||||||||    || |||||||||||  ||| ||||||||||| |||    
T  16595103 tgtttgatttgtaaattgtttctgggacagaacaaactgtaggcaagggacaggacaaaaacatgaagttttgtccctcgctaatccacaacacaacttt 16595202  T
Q  148 ttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaatgtttg 242  Q
    |||||  ||||||||||| | | | |||| ||||||   |||||| || ||||||||||| |||||||||| ||||||||||||| ||| |||||    
T  16595203 ttgtcccacgtacaagttatctaaaatacaaaaatagctttttgttcaccaaaaatcgtataagaccaaaaattattcaataccaaaaaagtttg 16595297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 31 - 254
Target Start/End: Original strand, 29672258 - 29672484
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||| ||||| |||||| ||| | || ||||||| |||| ||| || |||||||||| | | ||||||||||||||     
T  29672258 acaactctagttgtccagtgtttgattcgtaaaactgtttcaggtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcac 29672357  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||||||||| ||||||||  ||||||||||| | | | |||||||||||   |||||||| |||||||||||| || || |||| ||| |||||    
T  29672358 caaaccacaacacaactttttgtcccacgtacaagttatctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 29672457  T
Q  229 accat-aaatgtttggcctgtgttgtt 254  Q
     |||| |||  |||| |||||||||||    
T  29672458 gccatgaaaaatttgtcctgtgttgtt 29672484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 48 - 236
Target Start/End: Complemental strand, 45446608 - 45446418
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | | ||||||||||||| ||| || |||| ||||| | | |||||||| |||||  |||||||| ||||| |    
T  45446608 gtgtttgatttgtaaaactgtttcaggtacacgacaaactggaggcaagggacaggataaaaactcatatttttgttcctcaccaaaccacagcacaact 45446509  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    |||||||  ||||||||||||| | | |||||||||||   |||||||| |||||||||||| || || |||| ||| ||||| |||||||    
T  45446508 ttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaa 45446418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 48 - 254
Target Start/End: Original strand, 30542974 - 30543183
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | | ||||||||||||| ||  || |||||||||| | | ||||||||||||||  |||||||||||||| |    
T  30542974 gtgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaatggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaact 30543073  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccat-aaatgtttggc 244  Q
    ||| |||  ||||||||||||| | | |||||||||||   ||||||||  ||||||||||| || ||  ||| ||| ||||| |||| |||| |||| |    
T  30543074 tttcgtcccacgtacaagttgtctaaaataccaaaataacattttgtcccccaaaaatcgtataaaacataaaattactcaatgccataaaatatttgtc 30543173  T
Q  245 ctgtgttgtt 254  Q
    ||||||||||    
T  30543174 ctgtgttgtt 30543183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 31 - 236
Target Start/End: Original strand, 32019936 - 32020143
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | || |||||||||| | ||| |  |||||||||| | | |||||| |||||||     
T  32019936 acaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaagcaaggggtaggacaaaaactcatatttttatccctcac 32020035  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||| ||||| |||||||   ||||||||||||| | | ||||||||||| | |||||||| |||||||||||| || || |||| ||| |||||    
T  32020036 caaaccacagcacaactttttgttccacgtacaagttgtctaaaataccaaaatagtattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 32020135  T
Q  229 accataaa 236  Q
     |||||||    
T  32020136 gccataaa 32020143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 48 - 236
Target Start/End: Original strand, 37664235 - 37664425
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | || ||||||| |||| ||| || |||||||||| | | ||||||||||||||  |||||||| ||||| |    
T  37664235 gtgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaact 37664334  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    |||||||  ||||||||||||| | | |||||||||||   |||||||  ||||||||| || || || |||| ||| ||||| |||||||    
T  37664335 ttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtcgctcaaaaatcatataaaacaaaaaattactcaatgccataaa 37664425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 48 - 324
Target Start/End: Complemental strand, 40389193 - 40388915
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | || |||||||||||| ||  || |||||||||| ||| |||||| || ||||  |||||||| ||||| |    
T  40389193 gtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggacaggacaaaaactgatatttttatctctcaccaaaccacagcacaact 40389094  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaatgtttggcc 245  Q
    |||||||  || |||||||||| | | || ||||||||   ||| ||||  ||||||||||| || |  |||| ||||||||| |||||||  |||  ||    
T  40389093 ttttgtcccacatacaagttgttttaaatgccaaaatagcatttcgtcccccaaaaatcgtataaaataaaaaattattcaatgccataaaattttttcc 40388994  T
Q  246 tgtgttgttatgacttgctttgtgctattatgtcttgtgttgttatgtccgatacttattgtttagcaaatcaaacgca 324  Q
    ||||||||| || ||||  ||||||| |||||||||||  | ||||||||  ||||||   ||| ||||| ||||||||    
T  40388993 tgtgttgttctgccttgtgttgtgctgttatgtcttgtactcttatgtccagtacttaccattttgcaaaccaaacgca 40388915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 32303590 - 32303727
Alignment:
Q  99 aggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatca 198  Q
    |||||||||| | | ||||||||||||||  |||||||||||||| ||||||||  ||||||||||||| | | |||||||||||   |||||||| |||    
T  32303590 aggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctca 32303689  T
Q  199 aaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    |||||| || || || |||| ||| ||||| |||||||    
T  32303690 aaaatcatataaaacaaaaaattactcaatgccataaa 32303727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 31 - 236
Target Start/End: Original strand, 5968799 - 5969006
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | | |||||||| |||| ||| || |||||||||| | | |||||||||| |||     
T  5968799 acaactctagttgtccagtgtttgatttgtaaaactgtttaaggtacatgacaaactagaggcaagggacaggacaaaaactcatatttttgtccttcac 5968898  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||| ||||| ||||| ||  |||||||| |||| | | |||||||||||   |||||||| |||||||||||| || || |||| ||| |||||    
T  5968899 caaaccacagcacaactttttatcccacgtacaaattgtctaaaataccaaaataacattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 5968998  T
Q  229 accataaa 236  Q
     |||||||    
T  5968999 gccataaa 5969006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 78 - 205
Target Start/End: Original strand, 7394798 - 7394925
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatacc 177  Q
    |||||||| |||| ||| || | |||||||| | | ||||||||||||||  |||||| ||||||| ||||||||| ||||||||||||| | | |||||    
T  7394798 gacaaactagaggcaagggacatgacaaaaactcatatttttgtccctcaccaaaccataacacaactttttgtctcacgtacaagttgtctaaaatacc 7394897  T
Q  178 aaaatattcttttgtccatcaaaaatcg 205  Q
    ||||||   |||||||| ||||||||||    
T  7394898 aaaataacattttgtccttcaaaaatcg 7394925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 51 - 236
Target Start/End: Original strand, 10656641 - 10656828
Alignment:
Q  51 tttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttt 148  Q
    ||||||||||||| || |||||| || | |||||||| |||| || ||| |||||||||| |||| ||||||||| |||  |||||||||||||| ||||    
T  10656641 tttgatttgtaaatcttttttagagacatgacaaactagaggcaaaagacaggacaaaaactgaattttttgtccttcacaaaaccacaacacaactttt 10656740  T
Q  149 tgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    ||||| |||||||| |||| | | ||| |||||||    ||||||||  |||||||||| || |  |||| |||||||||| ||||||    
T  10656741 tgtctcacgtacaaattgtctaaaatatcaaaataacaatttgtccacaaaaaatcgtataaaagaaaaaattattcaataacataaa 10656828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 51 - 228
Target Start/End: Original strand, 14004999 - 14005178
Alignment:
Q  51 tttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttt 148  Q
    ||||||||||||| |||||| ||| | || |||||||||||| ||| || | |||||||| | | |||||||||| |||  |||||||||||||| ||||    
T  14004999 tttgatttgtaaaactgtttgaggtacaggacaaactggaggcaagggacaagacaaaaactcatatttttgtccatcaccaaaccacaacacaactttt 14005098  T
Q  149 tgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
    ||||  ||||||||||||| | | |||||||||||   |||||||||| |||||| ||| || || |||| ||| |||||    
T  14005099 tgtcccacgtacaagttgtctaaaataccaaaataacattttgtccataaaaaattgtataaaacaaaaaattactcaat 14005178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 48 - 228
Target Start/End: Complemental strand, 22999411 - 22999228
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaa-t 144  Q
    |||||||||||||||| |||||| ||| | || |||||||||||| |||||| |||||||||| ||| ||||||||||||||  |||||| | || || |    
T  22999411 gtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagacaggacaaaaactgatatttttgtccctcagcaaaccatagcaaaact 22999312  T
Q  145 tttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
    ||||||||  |||||||| |||| | | ||| |||||||   ||||||||  ||||||||||| || || |||| |||||||||    
T  22999311 tttttgtcccacgtacaacttgtctaaaatatcaaaatagcattttgtcctccaaaaatcgtataaaacaaaaaattattcaat 22999228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 48 - 228
Target Start/End: Original strand, 13406887 - 13407069
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||| ||||||||| |||||| ||| ||| ||||||||||||| |||  | || ||||||| | | ||||||||||||||  |||||||| || ||||    
T  13406887 gtgtttaatttgtaaaactgtttcaggtatatgacaaactggaggcaaggaacagaacaaaaactcatatttttgtccctcaccaaaccacagcataatt 13406986  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
    |||||||| ||||||||||||| | | |||||||||||   |||||| |  ||||||||||| || || |||| ||| |||||    
T  13406987 ttttgtctcacgtacaagttgtctaaaataccaaaatagcattttgtgccccaaaaatcgtataaaacaaaaaattactcaat 13407069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 78 - 236
Target Start/End: Complemental strand, 31732185 - 31732027
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatacc 177  Q
    |||||||| |||| ||| || | |||||||| | | ||||||||||||||  ||||||||  |||| ||||||||| || |||||||||| | | |||||    
T  31732185 gacaaacttgaggcaagggacatgacaaaaactcatatttttgtccctcaccaaaccacagtacaactttttgtctcacatacaagttgtctaaaatacc 31732086  T
Q  178 aaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    ||||||   |||||||| |||||||||||| || || |||| ||| ||||| |||||||    
T  31732085 aaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaa 31732027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 49 - 236
Target Start/End: Complemental strand, 27104111 - 27103922
Alignment:
Q  49 tgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattt 146  Q
    ||||||||||||||| |||||| ||| | || |||||||||||| ||| || | |||||||| | | ||||||||||||||  |||||||  ||||| ||    
T  27104111 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacatgacaaaaactcatatttttgtccctcaccaaaccactgcacaactt 27104012  T
Q  147 tttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    ||||||  ||||||||||||| | | ||| |||||||   |||||||| ||||||||| || || || |||| ||| ||||| |||||||    
T  27104011 tttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtccctcaaaaatcatataaaacaaaaaattactcaatgccataaa 27103922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 49 - 203
Target Start/End: Original strand, 22756364 - 22756520
Alignment:
Q  49 tgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattt 146  Q
    ||||||||||||||| ||||||  ||||||| ||||| | |||| |||||| | ||||||||   |||||||| |||||||||| |||||||||||| ||    
T  22756364 tgtttgatttgtaaaactgtttctgggataggacaaatttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactt 22756463  T
Q  147 tttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaat 203  Q
    ||||| | ||||||||||| | | | |||| |||||| | |||| |||| |||||||    
T  22756464 tttgtatcacgtacaagttatctaaaatacaaaaatagttttttatccaccaaaaat 22756520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 236
Target Start/End: Complemental strand, 34101678 - 34101471
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | || |||||||||||| ||| || |  ||||||| | | ||||||||||||||     
T  34101678 acaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaacacaaaaactcatatttttgtccctcac 34101579  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     ||||||||||| || ||||| |   ||||||||||||| | | |||||||||||   |||||||| |||||||||||| || || |||| ||| ||||     
T  34101578 caaaccacaacataacttttttttccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaac 34101479  T
Q  229 accataaa 236  Q
     |||||||    
T  34101478 gccataaa 34101471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 321
Target Start/End: Complemental strand, 45114208 - 45113933
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggataga-caaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | ||| |||||  || | ||| ||||||||||||| | | ||||||||||||||  ||||||||  |||| |    
T  45114208 gtgtttgatttgtaaaactgtttcaggtacagaacaaacgagatgcaagggagaggacaaaaactcatatttttgtccctcaccaaaccacagtacaact 45114109  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaatgtttggcc 245  Q
    ||||||| || ||||||||||| | | |||||||||||   ||| ||||  ||||||||||| || ||  ||| |||||||||  |||| |  |||  |     
T  45114108 ttttgtcataggtacaagttgtctaaaataccaaaatagcatttcgtcctccaaaaatcgtataaaacataaaattattcaatgtcatacaaatttatca 45114009  T
Q  246 tgtgttgttatgacttgctttgtgctattatgtcttgtgttgttatgtccgatacttattgtttagcaaatcaaac 321  Q
    |||||||||||| ||||  |||||||  | | ||||||  ||||||||||  |||||| ||||| ||||| |||||    
T  45114008 tgtgttgttatgccttgtgttgtgctgctctatcttgtactgttatgtccagtacttactgttttgcaaaccaaac 45113933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 10932819 - 10932701
Alignment:
Q  116 ttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagacca 215  Q
    |||||||||||| ||||||||| ||||| |||| ||   |||||||| |||| | | ||||||||||| |||||||||||| |||  |  || |||||||    
T  10932819 ttttgtccctcactaaaccacatcacaacttttagttccacgtacaatttgtctaaaataccaaaatagtcttttgtccataaaattttttataagacca 10932720  T
Q  216 aaagttattcaataccata 234  Q
    ||| |||||||||||||||    
T  10932719 aaaattattcaataccata 10932701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 233
Target Start/End: Complemental strand, 10531373 - 10531244
Alignment:
Q  104 aaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaat 203  Q
    ||||| ||||||| |||| ||||| ||||||| || |||| ||||| ||| || ||||| |||| |   ||||||||||| |||||||||||| ||||||    
T  10531373 aaaaactgaaattcttgttcctcactaaaccaaaatacaactttttatctcacatacaaattgtttagaataccaaaataatcttttgtccataaaaaat 10531274  T
Q  204 cgtacaagaccaaaagttattcaataccat 233  Q
    | || ||||  |||| ||||||||||||||    
T  10531273 cttataagataaaaaattattcaataccat 10531244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 48 - 166
Target Start/End: Complemental strand, 30501298 - 30501178
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | | ||||||||||||| ||| || ||||||||||   | ||||||||||||||  |||||||| ||||| |    
T  30501298 gtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaagggacaggacaaaaacacatatttttgtccctcaccaaaccacagcacaact 30501199  T
Q  146 ttttgtcttacgtacaagttg 166  Q
    |||||||  ||||||||||||    
T  30501198 ttttgtcccacgtacaagttg 30501178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 31 - 236
Target Start/End: Original strand, 12753260 - 12753467
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaa-actgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | ||||||||||||||| ||||||| ||| | || |||||||| ||| ||  || | |||||||| | | |||||||| |||||     
T  12753260 acaactctagttgtccagtgtttgatttgtaagactgtttcaggtacaggacaaactgaaggcaaatgacaagacaaaaactcatatttttgttcctcac 12753359  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||||||||| ||||||||  || |||||||||| | | |||||||||||   ||||||||  ||||||||||| || || | || ||| |||||    
T  12753360 caaaccacaacacaactttttgtcccacatacaagttgtctaaaataccaaaataacattttgtcccccaaaaatcgtataaaacaacaaattactcaat 12753459  T
Q  229 accataaa 236  Q
     |||||||    
T  12753460 gccataaa 12753467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 117 - 249
Target Start/End: Complemental strand, 6460344 - 6460213
Alignment:
Q  117 tttgtccctcattaaaccacaacacaa-ttttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagacca 215  Q
    |||||| ||||  |||||||| ||||| |||||||||  ||||| ||||||| | | |||||||||||   |||||||||| |||||||||| |||||      
T  6460344 tttgtctctcaccaaaccacatcacaacttttttgtcccacgtataagttgtctaaaataccaaaataacattttgtccataaaaaatcgtataagac-- 6460247  T
Q  216 aaagttattcaataccataaatgtttggcctgtg 249  Q
    ||| |||||||||||||||||  |||| ||||||    
T  6460246 aaaattattcaataccataaaaatttgtcctgtg 6460213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 111 - 236
Target Start/End: Original strand, 10320294 - 10320419
Alignment:
Q  111 gaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaa 210  Q
    |||||| || |||||||  |||||||||||||| |||||  |  ||||||||||||| | | ||| |||||||   ||||||| | ||| ||||||| ||    
T  10320294 gaaattcttatccctcaccaaaccacaacacaactttttaccacacgtacaagttgtctaaaatatcaaaataacattttgtctaacaacaatcgtataa 10320393  T
Q  211 gaccaaaagttattcaataccataaa 236  Q
     ||||||| |||||||||||||||||    
T  10320394 aaccaaaaattattcaataccataaa 10320419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 78 - 167
Target Start/End: Complemental strand, 35225783 - 35225694
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgt 167  Q
    ||||||||||||| ||| || |||||||||| || ||||||||||||||   |||||||| ||||| ||||||||  | |||||||||||    
T  35225783 gacaaactggaggcaagggacaggacaaaaactgcaatttttgtccctcgccaaaccacatcacaactttttgtcacaagtacaagttgt 35225694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 78 - 183
Target Start/End: Complemental strand, 37861980 - 37861875
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatacc 177  Q
    ||||||||||||| ||| || |||||||||| | | |||||| |||||||  |||||||| || || | |||||| |||||||||||||| | | |||||    
T  37861980 gacaaactggaggcaagtgacaggacaaaaactcatatttttatccctcaccaaaccacatcataactatttgtcctacgtacaagttgtctaaaatacc 37861881  T
Q  178 aaaata 183  Q
    ||||||    
T  37861880 aaaata 37861875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 78 - 183
Target Start/End: Complemental strand, 39643004 - 39642899
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatacc 177  Q
    ||||||||||||| ||| || | || ||||| ||| ||||||||||||||  |||||||||||||| ||| ||||  ||||||| ||||| | | |||||    
T  39643004 gacaaactggaggcaagggacaagataaaaactgatatttttgtccctcaccaaaccacaacacaactttctgtcccacgtacaggttgtctaaaatacc 39642905  T
Q  178 aaaata 183  Q
    ||||||    
T  39642904 aaaata 39642899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 105 - 241
Target Start/End: Original strand, 5859483 - 5859619
Alignment:
Q  105 aaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatc 204  Q
    ||||| ||||||| |||| |||| ||||  || | |||| |||||||| |||||||||||| | | | |||| |||||| | |||||||||| |||||||    
T  5859483 aaaatagaaatttgtgtctctcactaaagtacgatacaactttttgtcatacgtacaagttatctaaaatactaaaatagtattttgtccataaaaaatc 5859582  T
Q  205 gtacaagaccaaaagttattcaataccataaatgttt 241  Q
     || |||||||| | ||| ||||||| ||||| ||||    
T  5859583 ttataagaccaataattaatcaatacaataaaagttt 5859619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 99 - 207
Target Start/End: Complemental strand, 21272784 - 21272676
Alignment:
Q  99 aggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatca 198  Q
    |||||||||| | | ||||||||||||||  |||||||| ||||| ||||||||  ||||||||||||| | | |||| ||||||   |||||||| | |    
T  21272784 aggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatactaaaatagcattttgtccttta 21272685  T
Q  199 aaaatcgta 207  Q
    |||||||||    
T  21272684 aaaatcgta 21272676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 48 - 137
Target Start/End: Complemental strand, 37474853 - 37474762
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccaca 137  Q
    |||||||||||||||| |||||| ||| | || |||||||||||| |||||| |||||||||| | | ||||||||||||||  ||||||||    
T  37474853 gtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagacaggacaaaaacttatatttttgtccctcagcaaaccaca 37474762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 195
Target Start/End: Original strand, 36426282 - 36426348
Alignment:
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtcca 195  Q
    ||||||||||||||  ||||||||| || |||||||||| | | ||||||||||| |||||||||||    
T  36426282 taaaccacaacacatctttttgtctcacatacaagttgtctaaaataccaaaatagtcttttgtcca 36426348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 143 - 228
Target Start/End: Complemental strand, 28746379 - 28746294
Alignment:
Q  143 attttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
    |||||||||| |||||||||| | | | | |||||||||||   |||||| || |||||||||||||||| ||||| |||||||||    
T  28746379 attttttgtcctacgtacaagctatttaaaataccaaaataaaattttgttcaccaaaaatcgtacaagatcaaaaattattcaat 28746294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 183
Target Start/End: Complemental strand, 17805812 - 17805707
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatacc 177  Q
    |||||||| |||| ||| || | |||||||| | | |||||||| |||||  |||||| | ||||| | ||||||| ||||||||||||| | | |||||    
T  17805812 gacaaactagaggcaagggacaagacaaaaactcatatttttgttcctcaccaaaccaaagcacaactctttgtctcacgtacaagttgtctaaaatacc 17805713  T
Q  178 aaaata 183  Q
    ||||||    
T  17805712 aaaata 17805707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 3e-34; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 48 - 236
Target Start/End: Complemental strand, 34026821 - 34026631
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| |||| |||||||||||| ||| || | |||||||| | | ||||||||||||||  ||||||||||||||||    
T  34026821 gtgtttgatttgtaaaactgtttcaggtataggacaaactggaggcaagggacatgacaaaaactcatatttttgtccctcaccaaaccacaacacaatt 34026722  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    |||||||  ||||||||||||| | | |||||||||||   |||||||| |||||||||||| || || |||| ||| |||||||||||||    
T  34026721 ttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaataccataaa 34026631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 31 - 321
Target Start/End: Complemental strand, 28675961 - 28675668
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | || |||||||||||| ||| || |||||||||| | | ||||||||||||||     
T  28675961 acaattctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggataggacaaaaactcatatttttgtccctcac 28675862  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||||||||| ||||||||  ||||||||||||| | | |||||||||||   |||||||| |||||||||||| || || |||| ||| |||||    
T  28675861 caaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 28675762  T
Q  229 accat-aaatgtttggcctgtgttgttatgacttgctttgtgctattatgtcttgtgttgttatgtccgatacttattgtttagcaaatcaaac 321  Q
     |||| |||  |||| ||||||||||| || ||||  |||| || || | ||||||  |||| |||||  |||||||||||| ||||| |||||    
T  28675761 gccataaaaaatttgtcctgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttattgttttgcaaaccaaac 28675668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 101 - 242
Target Start/End: Complemental strand, 44000360 - 44000219
Alignment:
Q  101 gacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaa 200  Q
    ||||||||  ||| ||||| ||||||| ||||||||| ||||||||||||||  ||||||||||| | ||| |||| |||||| | ||||||||| ||||    
T  44000360 gacaaaaacagaattttttttccctcactaaaccacatcacaattttttgtcccacgtacaagttatctgaaatacaaaaatagttttttgtccaccaaa 44000261  T
Q  201 aatcgtacaagaccaaaagttattcaataccataaatgtttg 242  Q
    ||||||| |||||||||| ||||||||||||||||| |||||    
T  44000260 aatcgtataagaccaaaaattattcaataccataaaagtttg 44000219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 78 - 324
Target Start/End: Original strand, 51925171 - 51925417
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatacc 177  Q
    ||||||||||||| ||  || |||||||||| ||| ||||||||||||||  |||||||||||||| ||||||||  ||||||||||||| |   |||||    
T  51925171 gacaaactggaggcaaaggacaggacaaaaactgatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtttttaatacc 51925270  T
Q  178 aaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaatgtttggcctgtgttgttatgacttgctttgtgctattatg 277  Q
    ||||||   ||| ||||  ||||||||||| || || |||| ||||||||| |||||||  |||| | |||| |||| || ||||  ||||||| |||||    
T  51925271 aaaataacatttcgtcccccaaaaatcgtataaaacaaaaaattattcaatgccataaaaatttgtcatgtgctgttctgccttgtgttgtgctgttatg 51925370  T
Q  278 tcttgtgttgttatgtccgatacttattgtttagcaaatcaaacgca 324  Q
    ||||||  |||||| |||  ||||||  |||| ||||| ||||||||    
T  51925371 tcttgtactgttatatccagtacttaccgttttgcaaaccaaacgca 51925417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 77 - 236
Target Start/End: Original strand, 26282349 - 26282508
Alignment:
Q  77 agacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatac 176  Q
    |||||||||||||||||||||  ||||||||| | | ||||||||| ||||| |||||||| ||||| ||||||||  ||||| ||||||| | | ||||    
T  26282349 agacaaactggaggtaagagacgggacaaaaacttatatttttgtctctcatcaaaccacagcacaactttttgtcccacgtataagttgtctaaaatac 26282448  T
Q  177 caaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    |||||||   |||||||| |||||||||||| || || |||| ||||||||| |||||||    
T  26282449 caaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattattcaatgccataaa 26282508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 31 - 207
Target Start/End: Complemental strand, 29585046 - 29584868
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | || |||||||||||| ||| || |||||||||| | | ||||||||||||||     
T  29585046 acaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagtgacaggacaaaaactcatatttttgtccctcac 29584947  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgta 207  Q
     |||||||||||||| ||||||||  ||||||||||||| | | |||||||||||   |||||||| ||||||||||||    
T  29584946 caaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccttcaaaaatcgta 29584868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 78 - 324
Target Start/End: Original strand, 33364741 - 33364987
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatacc 177  Q
    ||||||||||||| |||||| |||||||||| ||| ||||||| ||||||  |||||||| ||||| ||||||||| ||||||||||||| | | ||| |    
T  33364741 gacaaactggaggcaagagacaggacaaaaactgatatttttgcccctcagcaaaccacatcacaactttttgtctcacgtacaagttgtctaaaatatc 33364840  T
Q  178 aaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaatgtttggcctgtgttgttatgacttgctttgtgctattatg 277  Q
    ||||||   ||||||||  ||||||||||| || || |||| |||||||||  ||||||  |||| |||| |||||| |  ||||  |||||||||| |     
T  33364841 aaaatagcattttgtcccccaaaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgtcctgggttgttctctcttgtattgtgctattctt 33364940  T
Q  278 tcttgtgttgttatgtccgatacttattgtttagcaaatcaaacgca 324  Q
    ||||||  |||| ||| |  |||||  ||||| ||||| ||||||||    
T  33364941 tcttgtactgttttgtactgtacttgctgttttgcaaaccaaacgca 33364987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 31 - 206
Target Start/End: Original strand, 42636317 - 42636494
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||||||| |||| |||||||||||| ||| || || ||||||| | | ||||||||||||||     
T  42636317 acaattctagttgtccagtgtttgatttgtaaaactgttttaggtataggacaaactggaggcaagggacagaacaaaaactcatatttttgtccctcac 42636416  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgt 206  Q
     |||||||| ||||| ||||||||  ||||||||||||| | | |||||||||||   |||||||| |||||||||||    
T  42636417 caaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtccctcaaaaatcgt 42636494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 48 - 254
Target Start/End: Original strand, 31882953 - 31883161
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | || |||||||||||| |||||| | |||||||| ||| |||||||| |||||  |||||||| ||||| |    
T  31882953 gtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagacacgacaaaaactgatatttttgtgcctcagcaaaccacagcacaact 31883052  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaatgtttggcc 245  Q
    |||||||  ||||||||||||| | | ||| |||||||   ||||||||  ||||||||||| || || |||| |||||||||  ||||||  |||| ||    
T  31883053 ttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtcccccaaaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgtcc 31883152  T
Q  246 tgtgttgtt 254  Q
    |||||||||    
T  31883153 tgtgttgtt 31883161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 31 - 236
Target Start/End: Original strand, 1344621 - 1344828
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| || ||| ||| | || |||||||||||| ||| || |||||| ||| | | ||||||||||||||     
T  1344621 acaactctagttgtccagtgtttgatttgtaaaactatttcaggtacaggacaaactggaggcaagggacaggacagaaactcatatttttgtccctcac 1344720  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||| ||||| ||||||||| ||||||||||||| | | |||||||||||   |||||||| |||||||||||| || || |||| ||| |||||    
T  1344721 caaaccacagcacaactttttgtctcacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 1344820  T
Q  229 accataaa 236  Q
     |||||||    
T  1344821 gccataaa 1344828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 82 - 236
Target Start/End: Original strand, 21221327 - 21221481
Alignment:
Q  82 aactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaa 181  Q
    ||||||||| ||| || |||||||||| | | ||||||||||||||  |||||||||||||| ||||||||| ||||||||||||| | | |||||||||    
T  21221327 aactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaa 21221426  T
Q  182 tattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    ||   |||||||| |||||||| ||| || || |||| ||| ||||| |||||||    
T  21221427 tagcattttgtccctcaaaaattgtataaaacaaaaaattactcaatgccataaa 21221481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 48 - 167
Target Start/End: Complemental strand, 19906916 - 19906795
Alignment:
Q  48 gtgtttgatttgtaaact-gttttagggataga-caaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| | |||| ||||| ||| ||||||||||| ||| || |||||||||| ||||||||||||||||||  |||||||| ||||| |    
T  19906916 gtgtttgatttgtaaaattgtttcagggacagaacaaactggaggcaagggacaggacaaaaactgaaatttttgtccctcaccaaaccacagcacaact 19906817  T
Q  146 ttttgtcttacgtacaagttgt 167  Q
    |||||||| |||||||||||||    
T  19906816 ttttgtctcacgtacaagttgt 19906795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 49 - 236
Target Start/End: Original strand, 53557727 - 53557916
Alignment:
Q  49 tgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattt 146  Q
    ||||||||||||||| |||||||||| | || |||||||||||| ||  || |||||||||| | | | ||||||||||||  |||||||  ||||| ||    
T  53557727 tgtttgatttgtaaaactgttttaggtacaggacaaactggaggcaatggacaggacaaaaactcatagttttgtccctcaccaaaccactgcacaactt 53557826  T
Q  147 tttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    ||||||| ||||||||||||| | | |||||||||||   |||||||| |||||||||||| || || |||| ||| ||||| |||||||    
T  53557827 tttgtctcacgtacaagttgtctaaaataccaaaatagcattttgtccttcaaaaatcgtataaaacaaaaaattactcaatgccataaa 53557916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 48 - 262
Target Start/End: Original strand, 3867580 - 3867796
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggataga-caaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||||| ||| || |||||||  |||||| | |||||||  ||||||||||||||||||  |||||||| ||||| |    
T  3867580 gtgtttgatttgtaaaactgtttcagggacagaacatactggagacaagagacatgacaaaacctgaaatttttgtccctcaccaaaccacagcacaact 3867679  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaatgtttggcc 245  Q
    ||||||| |||||||||||| | | | | |||||||||   ||||||||  |||||||| || || || | || |||||||||||||||||   ||| |     
T  3867680 ttttgtcctacgtacaagttttctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaacttgtca 3867779  T
Q  246 tgtgttgttatgacttg 262  Q
    |||||||||||| ||||    
T  3867780 tgtgttgttatgccttg 3867796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 31 - 236
Target Start/End: Complemental strand, 38213525 - 38213318
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaact-gttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| | |||| ||| |||| |||| ||||||| |||||| |||||||||| | | ||||||||| ||||     
T  38213525 acaactctagttgtccagtgtttgatttgtaaaattgtttcaggtataggacaatctggaggcaagagacaggacaaaaactcatatttttgtcactcac 38213426  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||||||||| ||||||||  ||||||||||||| | | |||||||||||   ||||||||  ||||||||||| || || |||| ||| ||| |    
T  38213425 gaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaataccattttgtcccccaaaaatcgtataaaacaaaaaattactcatt 38213326  T
Q  229 accataaa 236  Q
     |||||||    
T  38213325 gccataaa 38213318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 31 - 236
Target Start/End: Complemental strand, 40094674 - 40094467
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggataga-caaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | ||| ||||||||||| ||| || |||||||||| | | ||||||||||||||     
T  40094674 acaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacagaacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcac 40094575  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||| ||||| ||||||| | |||||||| |||| | | |||||||||||   |||||||| |||||||||| | || || |||| ||| |||||    
T  40094574 caaaccacatcacaactttttgtttcacgtacaaattgtctaaaataccaaaatagcattttgtccctcaaaaatcgcataaaacaaaaaattactcaat 40094475  T
Q  229 accataaa 236  Q
     |||||||    
T  40094474 gccataaa 40094467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 31 - 236
Target Start/End: Complemental strand, 44117110 - 44116903
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| | |||| ||| | || |||||||||||| ||| || |||||||||| | | |||||||||||||||    
T  44117110 acaactctagttgtccagtgtttgatttgtaaaaccgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcat 44117011  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||  ||||| ||||||||  ||||||||||||| | | |||| ||||||   |||||||| |||||||||||| || || |||| ||| |||||    
T  44117010 caaaccactgcacaactttttgtcccacgtacaagttgtctaaaatacaaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 44116911  T
Q  229 accataaa 236  Q
     |||||||    
T  44116910 gccataaa 44116903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 48 - 236
Target Start/End: Original strand, 12349102 - 12349292
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | || |||||||||||| ||| || |||||||||| | | ||||||||| ||||  |||||||| ||||| |    
T  12349102 gtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtctctcaccaaaccacagcacaact 12349201  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    || ||||  ||||||||||||| | | |||||||||||   |||||||| |||||||||||| || || |||| ||| ||||| |||||||    
T  12349202 ttatgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaa 12349292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 52 - 236
Target Start/End: Original strand, 34351303 - 34351489
Alignment:
Q  52 ttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatttttt 149  Q
    |||||||||||| |||||| ||||| | |||||||| |||| || ||| | ||||||||   ||||| ||||||||||| |||||||||||||| |||||    
T  34351303 ttgatttgtaaaactgtttcagggacatgacaaactagaggaaatagacacgacaaaaacaaaaattattgtccctcatcaaaccacaacacaacttttt 34351402  T
Q  150 gtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    |||  || |||||||||| | | ||| |||||||   |||| ||||  |||||||||||||||||| || ||||||||||| |||||    
T  34351403 gtcgcacatacaagttgtctaaaatatcaaaataacattttatccacaaaaaatcgtacaagaccataaattattcaatactataaa 34351489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 48 - 228
Target Start/End: Original strand, 49748842 - 49749024
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | || |||||||||||| ||  || | |||||||| ||| ||||||||||||||  |||||||||||||| |    
T  49748842 gtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggacatgacaaaaactgatatttttgtccctcaccaaaccacaacacaact 49748941  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
    |||||||  ||||||||||||| | | |||||||||||   ||| ||||  ||||||||||| || || |||| |||||||||    
T  49748942 ttttgtcccacgtacaagttgttttaaataccaaaataacatttcgtcccccaaaaatcgtataaaacaaaaaattattcaat 49749024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 48 - 228
Target Start/End: Original strand, 50386387 - 50386569
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | || |||||||||||| |||||| | |||||||||||| |||||||| |||||  |||||||| ||||| |    
T  50386387 gtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagacatgacaaaaattgatatttttgtgcctcaacaaaccacagcacaact 50386486  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
    ||||||| |||||||||||||| | | ||| |||||||   |||||| |  ||||||| ||| || || |||| |||||||||    
T  50386487 ttttgtcctacgtacaagttgtctaaaatatcaaaatagcattttgttccccaaaaattgtataaaacaaaaaattattcaat 50386569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 78 - 236
Target Start/End: Complemental strand, 51296703 - 51296545
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatacc 177  Q
    ||||||||||||| ||  || |||||||||| | | ||||||||||||||  ||||||||||||||||||||||| || ||||||||||| | | ||||     
T  51296703 gacaaactggaggcaaaggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaattttttgtcctaagtacaagttgtctaaaataca 51296604  T
Q  178 aaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    ||||||   ||||||||   |||||||||| || || |||| ||| |||||||||||||    
T  51296603 aaaatagcattttgtccccaaaaaatcgtataaaacaaaaaattactcaataccataaa 51296545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 31 - 236
Target Start/End: Original strand, 4851372 - 4851577
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||||||| | | |||||  |||||| ||| || |||||||||| | |  |||||||||||||     
T  4851372 acaactctagttgtccagtgtttgatttgtaaaactgttttaggtacaagacaatttggaggcaagggacaggacaaaaactca--tttttgtccctcac 4851469  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     || ||||||||||| ||||||||  ||||||||||||| | | |||||||||||   |||||||| |||||||||||| || || |||| ||| |||||    
T  4851470 caacccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 4851569  T
Q  229 accataaa 236  Q
     |||||||    
T  4851570 gccataaa 4851577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 49 - 207
Target Start/End: Original strand, 20609580 - 20609740
Alignment:
Q  49 tgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattt 146  Q
    ||||||||||||||| |||||| ||| | || ||||||||| || ||| || |||||||||| | | ||||||||||||||  |||||||| ||||| ||    
T  20609580 tgtttgatttgtaaaactgtttcaggtacaggacaaactggtggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactt 20609679  T
Q  147 tttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgta 207  Q
    ||||||  ||||||||||||| | | |||||||||||   |||||||| ||||||||||||    
T  20609680 tttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgta 20609740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 48 - 321
Target Start/End: Complemental strand, 29646220 - 29645944
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||||||| | | || |||||||||| ||| || ||||||||||   | ||||||||||||||  |||||||| ||||| |    
T  29646220 gtgtttgatttgtaaaactgttttaggtacacgataaactggaggcaagggataggacaaaaacatatatttttgtccctcaccaaaccacatcacaact 29646121  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagac-caaaagttattcaataccataaatgtttggc 244  Q
    |||||||  ||||||||||||| | | |||||||||||   ||||||||  ||||||||||| || ||  |||| ||||| ||| |||||||  |||| |    
T  29646120 ttttgtcccacgtacaagttgtttaaaataccaaaatagcattttgtcccccaaaaatcgtataaaacaaaaaaattatttaatgccataaaaatttgtc 29646021  T
Q  245 ctgtgttgttatgacttgctttgtgctattatgtcttgtgttgttatgtccgatacttattgtttagcaaatcaaac 321  Q
     |||| ||||||  |||   ||||| | || |||||||| ||||| ||||| |||||| || ||| ||||| |||||    
T  29646020 ttgtgatgttataccttatgttgtgttgttttgtcttgtattgttctgtccaatacttgttattttgcaaaccaaac 29645944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 31 - 236
Target Start/End: Original strand, 51259694 - 51259901
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | || |||||||||||| ||| || |||||||||| | | ||||||||||||||     
T  51259694 acaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcac 51259793  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||  ||||| ||||||||  ||||||||||||| | | |||||||||||   |||||||| | ||||||| || || || |||| ||| |||||    
T  51259794 caaaccacggcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtcccttaaaaatcatataaaacaaaaaattactcaat 51259893  T
Q  229 accataaa 236  Q
     |||||||    
T  51259894 gccataaa 51259901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 31 - 257
Target Start/End: Original strand, 25860335 - 25860564
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | || |||||||||||| ||| || | |||||||| | | ||||||||||||||     
T  25860335 acaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacatgacaaaaactcatatttttgtccctcac 25860434  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||| ||||| ||||||||| ||||||||||||| | | ||||| |||||   |||||| |  ||||||||||| || || |||| ||| ||| |    
T  25860435 caaaccacatcacaactttttgtctcacgtacaagttgtctaaaataccgaaatagcattttgttctccaaaaatcgtataaaacaaaaaattactcatt 25860534  T
Q  229 accat-aaatgtttggcctgtgttgttatg 257  Q
     |||| |||  |||| ||||||||||||||    
T  25860535 gccataaaaaatttgtcctgtgttgttatg 25860564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 48 - 207
Target Start/End: Original strand, 39052769 - 39052930
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | || |||||||||||| ||  || |||||||||| | | ||||||||| ||||  |||||||||||||| |    
T  39052769 gtgtttgatttgtaaaactgtttcaggcacaggacaaactggaggcaatggacaggacaaaaactcatatttttgtctctcaccaaaccacaacacaact 39052868  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgta 207  Q
    |||||||  ||||||||||||| | | |||||||||||   ||||||||  |||||||||||    
T  39052869 ttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtcccccaaaaatcgta 39052930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 111 - 254
Target Start/End: Original strand, 28624916 - 28625058
Alignment:
Q  111 gaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaa 210  Q
    |||||||||||||||||||||| ||||||| || |||||||| |||||| ||||| | | | |||| |||||  | ||| ||| | |||||||| || ||    
T  28624916 gaaatttttgtccctcattaaagcacaacataaatttttgtcctacgtataagttatctaaaatacaaaaatcat-tttagtctaccaaaaatcttataa 28625014  T
Q  211 gaccaaaagttattcaataccataaatgtttggcctgtgttgtt 254  Q
    ||| |||| ||||||||||||||||| ||||| | |||||||||    
T  28625015 gacaaaaaattattcaataccataaaagtttgtcttgtgttgtt 28625058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 81 - 228
Target Start/End: Original strand, 47958398 - 47958545
Alignment:
Q  81 aaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaa 180  Q
    |||||||||| ||| || |||||||||| | | ||||||||||||||  |||| ||| ||||| ||||||||  ||||||||||||| | | ||||||||    
T  47958398 aaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaactacagcacaactttttgtcccacgtacaagttgtctaaaataccaaa 47958497  T
Q  181 atattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
    |||   |||||||| |||||||||||| || || |||| ||| |||||    
T  47958498 atagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 47958545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 48 - 236
Target Start/End: Original strand, 3864606 - 3864795
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | | ||||||||||||| ||  || |||||||||| | | |||||||||||||   |||||||||||||| |    
T  3864606 gtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaaaggacaggacaaaaactcatatttttgtccctcgccaaaccacaacacaact 3864705  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    |||||||  ||||||||||||| | | |||||||||||   ||||||||  |||||||| || || || |||| ||| ||||| |||||||    
T  3864706 ttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtcc-ccaaaaatcatataaaacaaaaaattactcaatgccataaa 3864795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 78 - 236
Target Start/End: Original strand, 25927290 - 25927448
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatacc 177  Q
    ||||||||||||| ||| || |||||||||| | | |||||||||||| |  ||| |||||||||| ||||||||  ||||||||||||| | | |||||    
T  25927290 gacaaactggaggcaagggacaggacaaaaactcatatttttgtcccttaccaaaacacaacacaactttttgtcccacgtacaagttgtctaaaatacc 25927389  T
Q  178 aaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    ||||||   |||||| | |||||||||||| || || |||| | | ||||| |||||||    
T  25927390 aaaataacattttgttcctcaaaaatcgtataaaacaaaaaatcactcaatgccataaa 25927448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 48 - 183
Target Start/End: Complemental strand, 21374084 - 21373947
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | || ||||||| |||| ||| || |||||||||  | | ||||||||||||||  |||||||||||||| |    
T  21374084 gtgtttgatttgtaaaactgtttcaggtacaggacaaacttgaggcaagggacaggacaaaatctcatatttttgtccctcaccaaaccacaacacaact 21373985  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaata 183  Q
    |||||||  ||||||||||||| | | |||||||||||    
T  21373984 ttttgtcccacgtacaagttgtctaaaataccaaaata 21373947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 78 - 183
Target Start/End: Complemental strand, 50678920 - 50678815
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatacc 177  Q
    ||||||||||||| ||   | |||||||||| ||| ||||||||| ||||  |||||||||||||| ||||||||| ||||||||||||| | | |||||    
T  50678920 gacaaactggaggcaaagaacaggacaaaaactgatatttttgtctctcaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaatacc 50678821  T
Q  178 aaaata 183  Q
    ||||||    
T  50678820 aaaata 50678815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 31 - 205
Target Start/End: Complemental strand, 24571452 - 24571276
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | | ||||||||||||| ||| || |||||||||| | | ||||||||||||||     
T  24571452 acaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcac 24571353  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcg 205  Q
     |||||||| ||||| ||||||||  | ||||||||||| | | |||| ||||||   ||||||||  |||||||||    
T  24571352 caaaccacagcacaactttttgtcccatgtacaagttgtctaaaatacaaaaataggattttgtcccccaaaaatcg 24571276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 236
Target Start/End: Complemental strand, 2135241 - 2135034
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | || ||||||| |||| ||| || || ||||||| | | ||||||||||||||     
T  2135241 acaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagggacagaacaaaaactcatatttttgtccctcac 2135142  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||| ||||| ||||||||  |||||||| || | | | |||||||||||    ||||||| |||||||||||| || || |||| ||| |||||    
T  2135141 caaaccacagcacaactttttgtcccacgtacaaattatctaaaataccaaaatagcactttgtccctcaaaaatcgtataaaacaaaaaattactcaat 2135042  T
Q  229 accataaa 236  Q
     |||||||    
T  2135041 gccataaa 2135034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 236
Target Start/End: Complemental strand, 20255215 - 20255009
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | || |||||||||||| |||  | |||||||||| | | ||||||||||||||     
T  20255215 acaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaggaacaggacaaaaactcatatttttgtccctcac 20255116  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||| ||||| || |||||  || |||||||||| | | |||||||||||   |||||||| ||||||||| || || || |||| ||| |||||    
T  20255115 caaaccacagcacaacttcttgtcccac-tacaagttgtctaaaataccaaaataacattttgtccctcaaaaatcttataaaacaaaaaattactcaat 20255017  T
Q  229 accataaa 236  Q
     |||||||    
T  20255016 gccataaa 20255009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 31 - 167
Target Start/End: Complemental strand, 24721656 - 24721518
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggataga-caaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||||| ||| ||||||||||||||  || |||||||||| | ||||||| || |||||     
T  24721656 acaactctagttgttcagtgtttgatttgtaaaactgtttcagggacagaacaaactggaggtaaaggacaggacaaaaactaaaattttggtacctcaa 24721557  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgt 167  Q
     |||||||||||||| ||||| ||  || ||||||||||    
T  24721556 caaaccacaacacaactttttatcccacatacaagttgt 24721518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 78 - 152
Target Start/End: Complemental strand, 52300558 - 52300484
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtc 152  Q
    ||||||||| ||||||| || |||||||||| |||||||||||||| |||  |||||||||| ||||||||||||    
T  52300558 gacaaactgcaggtaagggacaggacaaaaactgaaatttttgtccatcaccaaaccacaacgcaattttttgtc 52300484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 51 - 236
Target Start/End: Original strand, 54622731 - 54622917
Alignment:
Q  51 tttgatttgtaaa-ctgttttagggatagacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatttttt 149  Q
    ||||||||||||| |||||| ||| |  ||||||||  | | ||| || |||||||||| | | ||||||||| ||||  |||||||||||||| |||||    
T  54622731 tttgatttgtaaaactgtttcaggtactgacaaactaaatgcaagggacaggacaaaaactcatatttttgtcgctcacgaaaccacaacacaacttttt 54622830  T
Q  150 gtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
     ||  ||||||||||||| | | |||||||||||   ||| ||||  ||||||||||| || || |||| ||||||||| |||||||    
T  54622831 atcccacgtacaagttgtctaaaataccaaaatagcatttcgtcccccaaaaatcgtataaaacaaaaaattattcaatgccataaa 54622917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 183
Target Start/End: Complemental strand, 3964442 - 3964305
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| | ||| | |||||| |||||| |||  |  ||||||||| ||||||||||||||||||  |||||||| ||||| |    
T  3964442 gtgtttgatttgtaaaactgtttcatggacatgacaaattggaggcaaggaactggacaaaaactgaaatttttgtccctcaccaaaccacagcacaact 3964343  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaata 183  Q
    |||||||  | ||||||||||| | | |||||||||||    
T  3964342 ttttgtcccatgtacaagttgtctaaaataccaaaata 3964305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 107 - 167
Target Start/End: Complemental strand, 37075264 - 37075204
Alignment:
Q  107 aattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgt 167  Q
    ||||||||||  |||| |||||||||||| ||||||||||||||||||||||| |||||||    
T  37075264 aattgaaattcatgtctctcattaaaccataacacaattttttgtcttacgtataagttgt 37075204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 99 - 206
Target Start/End: Complemental strand, 389544 - 389437
Alignment:
Q  99 aggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatca 198  Q
    |||||||||| |||||| |||||||| ||  |||||| ||||||| ||| || ||||  || ||||||| | | ||||||||||| |||||| ||||||     
T  389544 aggacaaaaactgaaatatttgtcccccaggaaaccaaaacacaactttctggcttaaatataagttgtctaaaataccaaaatagtcttttatccatcc 389445  T
Q  199 aaaatcgt 206  Q
    ||||||||    
T  389444 aaaatcgt 389437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 48 - 141
Target Start/End: Original strand, 41682984 - 41683079
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacac 141  Q
    |||||||||||||||| |||||| ||| | || |||||||||||| |||||| | |||||||| ||| | ||||||||||||  ||||||||||||    
T  41682984 gtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagacaagacaaaaactgatacttttgtccctcagcaaaccacaacac 41683079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 101 - 195
Target Start/End: Original strand, 14155447 - 14155540
Alignment:
Q  101 gacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtcca 195  Q
    |||||||| |||||||||  ||||||| |||| || ||||||| ||||||||| | ||||||||||| | | ||| ||||||| |||||||||||    
T  14155447 gacaaaaactgaaatttta-tccctcactaaatcataacacaactttttgtctcaagtacaagttgtctaaaatatcaaaataatcttttgtcca 14155540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 115 - 236
Target Start/End: Complemental strand, 5442376 - 5442255
Alignment:
Q  115 tttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagacc 214  Q
    |||||||||||||  ||| |||| ||||| ||||||||  ||||||||| ||| | | ||| |||||||   |||| ||| |||||||||||| || ||     
T  5442376 tttttgtccctcaccaaatcacagcacaactttttgtcccacgtacaagctgtctaaaatatcaaaatagcattttatccctcaaaaatcgtataaaaca 5442277  T
Q  215 aaaagttattcaataccataaa 236  Q
    |||| ||||||||| |||||||    
T  5442276 aaaaattattcaatgccataaa 5442255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 87 - 151
Target Start/End: Complemental strand, 32321654 - 32321590
Alignment:
Q  87 gaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgt 151  Q
    ||||||||||| | || |||||||||| ||||||||  ||||||||| ||||||||| |||||||    
T  32321654 gaggtaagagacacgataaaaattgaattttttgtcattcattaaactacaacacaactttttgt 32321590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 101 - 200
Target Start/End: Original strand, 8648543 - 8648642
Alignment:
Q  101 gacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaa 200  Q
    |||||||| ||||||| |||| ||| | ||||| ||| ||||| ||||||||  | |||||| |||| | | ||||||||||| ||||||||||| ||||    
T  8648543 gacaaaaactgaaattcttgttcctaactaaactacatcacaactttttgtcacaagtacaaattgtctaaaataccaaaataatcttttgtccaccaaa 8648642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 101 - 236
Target Start/End: Complemental strand, 30258971 - 30258837
Alignment:
Q  101 gacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaa 200  Q
    |||||||| |||||||| ||| || || |||||||||| ||||  ||  |||| |||||||||| |||| | |    |||||| ||||||||| |  |||    
T  30258971 gacaaaaactgaaatttgtgtaccccactaaaccacaatacaacgttg-gtctcacgtacaagtcgtataagaccaaaaaatagtcttttgtctacaaaa 30258873  T
Q  201 aatcgtacaagaccaaaagttattcaataccataaa 236  Q
    ||||||| |||||||||| ||||| |||||||||||    
T  30258872 aatcgtataagaccaaaaattattgaataccataaa 30258837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 32768700 - 32768649
Alignment:
Q  92 aagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaa 143  Q
    |||||| | |||||||||||||||| |||||||||| ||||||||| |||||    
T  32768700 aagagacatgacaaaaattgaaattattgtccctcactaaaccacatcacaa 32768649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 105 - 151
Target Start/End: Complemental strand, 26106712 - 26106666
Alignment:
Q  105 aaaattgaaatttttgtccctcattaaaccacaacacaattttttgt 151  Q
    |||| |||||||||||| ||||| |||||||||||||||| ||||||    
T  26106712 aaaagtgaaatttttgttcctcactaaaccacaacacaatcttttgt 26106666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 152
Target Start/End: Complemental strand, 6179546 - 6179473
Alignment:
Q  80 caaactggaggtaagagagaggacaaaaattgaaatttttgt-ccctcattaaaccacaacacaattttttgtc 152  Q
    ||||||||||||||| || |||||||||| || ||||||||| |||||   |||||||| ||||| ||||||||    
T  6179546 caaactggaggtaagggacaggacaaaaactgtaatttttgtcccctcgccaaaccacagcacaactttttgtc 6179473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 235
Target Start/End: Complemental strand, 32621927 - 32621834
Alignment:
Q  142 aattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataa 235  Q
    |||||||||||  | ||||||||||| | | ||||||||||| | | ||||||||||||||| ||| |  || |||| |||||||||| |||||    
T  32621927 aattttttgtcccatgtacaagttgtctaaaataccaaaataatatgttgtccatcaaaaattgtatacaacaaaaaattattcaatagcataa 32621834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 183
Target Start/End: Original strand, 39215432 - 39215537
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatacc 177  Q
    ||||||| ||||||||| || | |||||||| ||||||||||  |||| |   ||||| | || |||||||||||  ||||||||||||| | | |||||    
T  39215432 gacaaaccggaggtaagggacaagacaaaaactgaaatttttaccccttaccgaaccaaatcataattttttgtcccacgtacaagttgtctaaaatacc 39215531  T
Q  178 aaaata 183  Q
    ||||||    
T  39215532 aaaata 39215537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 47041508 - 47041552
Alignment:
Q  104 aaaaattgaaatttttgtccctcattaaaccacaacacaattttt 148  Q
    ||||||||||||| |||||||| ||| |||||||||||| |||||    
T  47041508 aaaaattgaaattcttgtcccttattgaaccacaacacatttttt 47041552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 5e-33; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 30 - 236
Target Start/End: Complemental strand, 2351851 - 2351643
Alignment:
Q  30 gacaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctca 127  Q
    ||||| ||||||| | | |||||||||||||||| |||||| ||| |||| |||||||||||| ||| || |||||||||| | | ||||||||||||||    
T  2351851 gacaactctagttgttcagtgtttgatttgtaaaactgtttaaggtataggacaaactggaggcaagtgacaggacaaaaactcatatttttgtccctca 2351752  T
Q  128 ttaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaa 227  Q
      |||||||| ||||| ||||||||  ||||||||||||| | | |||||||||||   |||||||| ||||||||||||||| || |||| ||| ||||    
T  2351751 ccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtccctcaaaaatcgtacaaaacaaaaaattactcaa 2351652  T
Q  228 taccataaa 236  Q
    | |||||||    
T  2351651 tgccataaa 2351643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 30 - 236
Target Start/End: Complemental strand, 32528886 - 32528678
Alignment:
Q  30 gacaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctca 127  Q
    ||||| ||||||| | | |||||||||||||||| |||||| ||| | || |||||||||||  ||| || |||||||||| | | ||||||||||||||    
T  32528886 gacaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagacaagggacaggacaaaaactcatatttttgtccctca 32528787  T
Q  128 ttaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaa 227  Q
      |||||||||||||| ||||||||  ||||||||||||| | | |||||||||||   |||||||| |||||||||||| || || |||| ||||||||    
T  32528786 ccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattattcaa 32528687  T
Q  228 taccataaa 236  Q
    | |||||||    
T  32528686 tgccataaa 32528678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 81 - 207
Target Start/End: Original strand, 22432287 - 22432413
Alignment:
Q  81 aaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaa 180  Q
    |||||||||| |||||| |||||||||| ||| ||||||||||||||| |||||||||||||||||||||||| | ||||||||||| | | ||||||||    
T  22432287 aaactggaggcaagagacaggacaaaaactgatatttttgtccctcatcaaaccacaacacaattttttgtctcaagtacaagttgtctaaaataccaaa 22432386  T
Q  181 atattcttttgtccatcaaaaatcgta 207  Q
    |||   ||| ||||  |||||||||||    
T  22432387 atagcatttcgtcccccaaaaatcgta 22432413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 18 - 236
Target Start/End: Original strand, 31770504 - 31770724
Alignment:
Q  18 aggatatgatatgacaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaat 115  Q
    |||| |||| || |||| ||||||| | | |||||||||||||||| |||||| | | | | ||||||||||||| ||| || |||||||||| | | ||    
T  31770504 aggacatgacataacaactctagttgttcagtgtttgatttgtaaaactgtttcatgtacaagacaaactggaggcaagggacaggacaaaaactcatat 31770603  T
Q  116 ttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagacca 215  Q
    |||| |||||||  |||||||||||||| ||||||||  ||||||||||||| ||| |||||||||||   |||||||| ||||||||| || || || |    
T  31770604 ttttatccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctgaaataccaaaatagcattttgtccctcaaaaatcatataaaacaa 31770703  T
Q  216 aaagttattcaataccataaa 236  Q
    ||| ||| ||||| |||||||    
T  31770704 aaaattactcaatgccataaa 31770724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 30 - 254
Target Start/End: Complemental strand, 39918678 - 39918451
Alignment:
Q  30 gacaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctca 127  Q
    ||||| ||||||| | | |||||||||||||||| |||||| ||  | | ||||||||||||| ||| || |||||||||| | | ||||||||||||||    
T  39918678 gacaactctagttgtccagtgtttgatttgtaaaactgtttcagatacaagacaaactggaggcaagggacaggacaaaaactcatatttttgtccctca 39918579  T
Q  128 ttaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaa 227  Q
      |||||||| ||||| ||||||||| ||||||||||||| | | |||||||||||   ||||||||  ||||||||||| || ||  ||| ||| ||||    
T  39918578 ccaaaccacagcacaactttttgtctcacgtacaagttgtctaaaataccaaaataacattttgtcccccaaaaatcgtataaaacataaaattactcaa 39918479  T
Q  228 taccat-aaatgtttggcctgtgttgtt 254  Q
    ||| || |||| |||| |||||||||||    
T  39918478 tactataaaatatttgtcctgtgttgtt 39918451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 31 - 207
Target Start/End: Complemental strand, 7523342 - 7523164
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | || |||||||||||| ||| || |||||||||| | | ||||||||||||||     
T  7523342 acaattctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcac 7523243  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgta 207  Q
     |||||||| ||||| ||||||||  ||||||||||||| | | |||||||||||   |||||||| ||||||||||||    
T  7523242 caaaccacatcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgta 7523164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 78 - 183
Target Start/End: Complemental strand, 8136958 - 8136853
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatacc 177  Q
    ||||||||||||| |||||| |||||||||| | | ||||||||||||||  |||||||||||||| |||||||| |||||||||||||| | | |||||    
T  8136958 gacaaactggaggcaagagacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcctacgtacaagttgtctaaaatacc 8136859  T
Q  178 aaaata 183  Q
    ||||||    
T  8136858 aaaata 8136853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 48 - 236
Target Start/End: Original strand, 21739104 - 21739294
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | || |||||||||||| ||| || |||||||||| | | ||||||||||||||  |||||||| ||||| |    
T  21739104 gtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaact 21739203  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    |||||||  ||||||||||||| | | |||||||||||   |||||||| |||||||| ||| || || |||| |||  |||| |||||||    
T  21739204 ttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaattgtataaaacaaaaaattacacaatgccataaa 21739294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 78 - 183
Target Start/End: Original strand, 5571619 - 5571724
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatacc 177  Q
    ||||||||||||| ||| || |||||||||||| | ||||||||||||||  |||||||||||||| ||||||||  ||||||||||||| | | |||||    
T  5571619 gacaaactggaggcaagggacaggacaaaaattcatatttttgtccctcaccaaaccacaacacaactttttgtccaacgtacaagttgtctaaaatacc 5571718  T
Q  178 aaaata 183  Q
    ||||||    
T  5571719 aaaata 5571724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 25 - 228
Target Start/End: Original strand, 31879996 - 31880201
Alignment:
Q  25 gatatgacaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtc 122  Q
    ||||| |||| ||||||| | | |||||||||| ||||| |||||| ||| | || |||||||||||| ||| || |||||||||| | | |||||||||    
T  31879996 gatataacaactctagttgttcagtgtttgattagtaaaactgtttcaggtacaggacaaactggaggcaagtgacaggacaaaaactcatatttttgtc 31880095  T
Q  123 cctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagtta 222  Q
    |||||  |||||||| ||||| | |||||| |||||||||||||| | | |||||||||||   ||||||||  ||| ||||||| || || |||| |||    
T  31880096 cctcaccaaaccacatcacaactatttgtcctacgtacaagttgtctaaaataccaaaatagcattttgtcccccaacaatcgtataatacaaaaaatta 31880195  T
Q  223 ttcaat 228  Q
    ||||||    
T  31880196 ttcaat 31880201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 31 - 236
Target Start/End: Complemental strand, 35701447 - 35701240
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| ||||||  || | || |||||||||||| ||| || |||||||||| | | ||||||||||||||     
T  35701447 acaactctagttgtccagtgtttgatttgtaaaactgtttctggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcac 35701348  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     ||||||||||| || |||||||   ||||||||||||| | | |||||||||||   |||||||| |||||||||||| || || |||| ||| ||| |    
T  35701347 caaaccacaacataactttttgttccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcatt 35701248  T
Q  229 accataaa 236  Q
     |||||||    
T  35701247 gccataaa 35701240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 78 - 236
Target Start/End: Original strand, 7208205 - 7208363
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatacc 177  Q
    ||||||||||| | |||||| || || |||| | | ||||||||||||||  |||||||| ||||| ||||||||| ||||||||||||| | | |||||    
T  7208205 gacaaactggatgcaagagacagaaccaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtctcacgtacaagttgtctaaaatacc 7208304  T
Q  178 aaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    ||||||   |||||| | |||||||||||| || || |||| ||| ||||| |||||||    
T  7208305 aaaatagcattttgttcctcaaaaatcgtataaaacaaaaaattactcaatgccataaa 7208363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 31 - 207
Target Start/End: Complemental strand, 11963511 - 11963333
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | || |||||||||||| ||| || | |||||||| | | ||||||||||||||     
T  11963511 acaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacatgacaaaaactcatatttttgtccctcac 11963412  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgta 207  Q
     |||||||| ||||| ||||||||  |||| |||||||| | | |||||||||||   |||||||| ||||||||||||    
T  11963411 caaaccacagcacaactttttgtcccacgtgcaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgta 11963333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 50 - 236
Target Start/End: Original strand, 4818085 - 4818273
Alignment:
Q  50 gtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatttt 147  Q
    |||||||||||||| |||||| ||| | | ||||||||||||| |||  | | |||||||| | | ||||||||||||||  |||||||| ||||| |||    
T  4818085 gtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaaggaacaagacaaaaactcatatttttgtccctcaccaaaccacagcacaacttt 4818184  T
Q  148 ttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    |||||  ||||||||||||| | | |||||||||||   |||||||| | |||||||||| || || |||| ||| ||||| |||||||    
T  4818185 ttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctaaaaaatcgtataaaacaaaaaattactcaatgccataaa 4818273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 78 - 236
Target Start/End: Complemental strand, 553518 - 553359
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatacc 177  Q
    ||||||||||||| |||||| | |||||||| | | ||||||||| ||||  |||||||||||||| ||||||||  ||||||||||||| | | |||||    
T  553518 gacaaactggaggcaagagacaagacaaaaactcatatttttgtctctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatacc 553419  T
Q  178 aaaatattcttttgt-ccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    ||||||   |||||| ||  ||||||||||| || ||  ||| ||||||||| |||||||    
T  553418 aaaataacattttgtccccccaaaaatcgtataaaacataaaattattcaatgccataaa 553359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 48 - 229
Target Start/End: Original strand, 28090463 - 28090646
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | | | ||||||||||| ||| || | |||||||| | | ||||||||||||||  |||| ||||||||| |    
T  28090463 gtgtttgatttgtaaaactgtttcaggtacaaggcaaactggaggcaagggacatgacaaaaactcatatttttgtccctcaccaaactacaacacaact 28090562  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaata 229  Q
    |||||||  ||||||||||||| | | |||| ||||||   |||||||| |||||||||||| || || |||| ||| ||||||    
T  28090563 ttttgtcccacgtacaagttgtctaaaatacaaaaataacattttgtccctcaaaaatcgtataaaacaaaaaattactcaata 28090646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 78 - 228
Target Start/End: Complemental strand, 3735478 - 3735328
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatacc 177  Q
    |||||| |||||| ||  || |||||||||| ||| |||||||||| |||  |||||||| ||||| ||||||||  ||||||||||||| | | |||||    
T  3735478 gacaaaatggaggcaatggacaggacaaaaactgatatttttgtccatcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatacc 3735379  T
Q  178 aaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
    ||||||   ||||||||  ||||||||||| || || |||| |||||||||    
T  3735378 aaaataacattttgtcctccaaaaatcgtataaaacaaaaaattattcaat 3735328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 39 - 271
Target Start/End: Original strand, 18470362 - 18470596
Alignment:
Q  39 agttatgctgtgtttgatttgtaaa-ctgttttagggataga-caaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccac 136  Q
    |||||| | |||||||||||||||| |||||| ||||| ||| ||||||| ||| ||| || | |||||||| |||||||||||||||| |  |||||||    
T  18470362 agttatccagtgtttgatttgtaaaactgtttcagggacagaacaaactgaaggcaagggacaagacaaaaactgaaatttttgtcccttaccaaaccac 18470461  T
Q  137 aacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    | ||||| ||||| ||  ||||||||||||| | | | |||||||||   ||| ||||  |||||| | || || || | || |||||||||||||||||    
T  18470462 agcacaactttttatcccacgtacaagttgtctaaaacaccaaaataacatttcgtcccccaaaaagcatataaaacaagaaattattcaataccataaa 18470561  T
Q  237 tgtttggcctgtgttgttatgacttgctttgtgct 271  Q
      ||||  ||||| ||||||| ||||  |||||||    
T  18470562 aatttgttctgtgctgttatgtcttgtattgtgct 18470596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 48 - 236
Target Start/End: Complemental strand, 40489490 - 40489300
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | | ||||||||||||| ||| ||  ||||||||| | | ||||||||||||||  ||| |||| ||||| |    
T  40489490 gtgtttgatttgtaaaactgtttcaggtagaagacaaactggaggcaagggacgggacaaaaactcatatttttgtccctcaccaaatcacagcacaact 40489391  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    |||||||  || |||||||||| | | |||||||||||   |||||||| |||||||| ||| || || |||| ||| ||||| |||||||    
T  40489390 ttttgtcccacatacaagttgtctaaaataccaaaataacattttgtccctcaaaaattgtataaaacaaaaaattactcaatgccataaa 40489300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 78 - 236
Target Start/End: Original strand, 41790437 - 41790595
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatacc 177  Q
    ||||||||||||| || | | |||||||||| | | ||||||||||||||  |||||||||||||| ||||||||| |||||||| |||| | | ||||     
T  41790437 gacaaactggaggcaataaacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaaattgtctaaaatact 41790536  T
Q  178 aaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    ||||||   ||||||||  ||||||||||| || ||  ||| ||| ||||| |||||||    
T  41790537 aaaataacattttgtcccccaaaaatcgtataaaacataaaattactcaatgccataaa 41790595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 48 - 207
Target Start/End: Original strand, 23091247 - 23091408
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | || | |||||||||| ||| || | |||||||| | | |||||||||| |||| |||||||||||||| |    
T  23091247 gtgtttgatttgtaaaactgtttcaggtacaggataaactggaggcaagggacaagacaaaaactcatatttttgtccgtcatcaaaccacaacacaact 23091346  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgta 207  Q
    |||||||| ||||| || |||| | | ||| |||||||   |||||||| ||||||||||||    
T  23091347 ttttgtctcacgtataaattgtctaaaatatcaaaataacattttgtccctcaaaaatcgta 23091408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 102 - 194
Target Start/End: Original strand, 700600 - 700692
Alignment:
Q  102 acaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtcc 194  Q
    ||||||||| | |||||||| |||||  |||||||||||||| ||||||||| ||||||||||| | | | ||||||||||||| ||||||||    
T  700600 acaaaaattcatatttttgttcctcaccaaaccacaacacaactttttgtctcacgtacaagttatctaaaataccaaaatattattttgtcc 700692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 48 - 166
Target Start/End: Original strand, 4689641 - 4689761
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | | ||||||||||||| ||| || ||||||||||   | ||||||||||||||  |||||||||||||| |    
T  4689641 gtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaagggacaggacaaaaacacatatttttgtccctcaccaaaccacaacacaact 4689740  T
Q  146 ttttgtcttacgtacaagttg 166  Q
    |||||||  ||||||||||||    
T  4689741 ttttgtcccacgtacaagttg 4689761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 49 - 167
Target Start/End: Complemental strand, 5598632 - 5598512
Alignment:
Q  49 tgtttgatttgtaaa-ctgttttagggat-agacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattt 146  Q
    ||||||||||||||| |||||| ||| |  |||||||||||||| ||| |||||||||||||  || |||||||||| |||| |||| ||| ||||| ||    
T  5598632 tgtttgatttgtaaaactgtttcaggtacgagacaaactggaggcaagggagaggacaaaaacagatatttttgtccttcatcaaacaacagcacaactt 5598533  T
Q  147 tttgtcttacgtacaagttgt 167  Q
    ||||||| |||||||| ||||    
T  5598532 tttgtctcacgtacaacttgt 5598512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 236
Target Start/End: Original strand, 6284273 - 6284432
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatacc 177  Q
    ||||||||||||| | | || |||||||||| | |  |||||||||||||  |||||||||||||| ||||||||  |||||||||||||   | |||||    
T  6284273 gacaaactggaggcatgggacaggacaaaaacttatttttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtccaaaatacc 6284372  T
Q  178 -aaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
     ||||||   |||||||| |||||||||||| || || |||| ||| ||||| |||||||    
T  6284373 aaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaa 6284432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 49 - 224
Target Start/End: Complemental strand, 17031309 - 17031132
Alignment:
Q  49 tgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattt 146  Q
    ||||||||||||||| |||||| ||||| || ||||| |||||| ||  || ||||||||||   ||||||||| ||||||||||| |||| ||||| ||    
T  17031309 tgtttgatttgtaaaactgtttcagggacagtacaaattggaggcaaaggacaggacaaaaacataaatttttgcccctcattaaatcacagcacaactt 17031210  T
Q  147 tttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttatt 224  Q
    || |||  ||||||||||| | | | |||| ||||||   |||||||||  ||||||| || |||||||||| |||||    
T  17031209 ttcgtcccacgtacaagttatttaaaatacaaaaatagctttttgtccacaaaaaatcatataagaccaaaaattatt 17031132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 51 - 236
Target Start/End: Complemental strand, 39788343 - 39788155
Alignment:
Q  51 tttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttt 148  Q
    ||||||||||||| |||||| ||| | || |||||||| ||| ||  || |||||||||| | | ||||||||||||||  |||||||| ||||| ||||    
T  39788343 tttgatttgtaaaactgtttcaggtacaggacaaactgtaggcaaaggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttt 39788244  T
Q  149 tgtcttacgtacaagttgtatgatataccaaaat-attcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    ||||  ||||||||||||| | | |||| ||||| |   ||||||||  ||||||||||| || || |||| ||| |||||||||||||    
T  39788243 tgtcccacgtacaagttgtctaaaatactaaaataacatttttgtcccccaaaaatcgtataaaacaaaaaattactcaataccataaa 39788155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 31 - 236
Target Start/End: Original strand, 24181550 - 24181757
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | || |||||||||||  ||| || |||||||||| | | ||||||||||||||     
T  24181550 acaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagccaagggacaggacaaaaactcatatttttgtccctcac 24181649  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||| || || ||||||||  ||||| ||||||| | | |||||||||||   ||||||||  |||| |||||| || || | || ||| |||||    
T  24181650 caaaccacagcataactttttgtcccacgtataagttgtctaaaataccaaaatagcattttgtcccccaaagatcgtataaaacaacaaattactcaat 24181749  T
Q  229 accataaa 236  Q
     |||||||    
T  24181750 gccataaa 24181757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 112 - 207
Target Start/End: Original strand, 27839082 - 27839177
Alignment:
Q  112 aaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgta 207  Q
    ||||||||||||||||  |||||| || |||| ||||||||| | ||||||||||| | | |||||||||||  |||||||||  |||||||||||    
T  27839082 aaatttttgtccctcaccaaaccataaaacaactttttgtctcatgtacaagttgtctaaaataccaaaatagccttttgtcctccaaaaatcgta 27839177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 31 - 236
Target Start/End: Complemental strand, 29241548 - 29241341
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | | |||||| |||||| ||| || ||| |||||  | | |||||||||||||      
T  29241548 acaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaattggaggcaagggacaggccaaaagctcatatttttgtccctcgc 29241449  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||| ||||| ||||||||  ||||||||||||  | | ||| |||||||   |||||||| |||||||||||| || || |||| ||| |||||    
T  29241448 caaaccacagcacaactttttgtcccacgtacaagttggctaaaatatcaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 29241349  T
Q  229 accataaa 236  Q
     |||||||    
T  29241348 gccataaa 29241341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 51 - 228
Target Start/End: Complemental strand, 34795037 - 34794858
Alignment:
Q  51 tttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttt 148  Q
    ||||||||||||| |||||| ||| | || ||||||| |||| ||| || |||||||||| | | ||||||||||||||  |||||||| ||||| ||||    
T  34795037 tttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttt 34794938  T
Q  149 tgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
    ||||  ||||| ||||||| | | |||||||||||   |||||| |  ||||| ||||| || || |||| |||||||||    
T  34794937 tgtcccacgtataagttgtctaaaataccaaaatagcattttgttccccaaaattcgtataaaacaaaaaattattcaat 34794858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 79 - 236
Target Start/End: Original strand, 7725785 - 7725942
Alignment:
Q  79 acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtat-gatatacc 177  Q
    |||||||||| | ||| || | |||||||| | | |||||||||| ||||||||||||||||||| ||||||||  ||||| ||||||| |  |||| ||    
T  7725785 acaaactggatgcaagggacatgacaaaaactcatatttttgtccttcattaaaccacaacacaactttttgtcccacgtataagttgtctaaatat-cc 7725883  T
Q  178 aaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    ||||||   ||| ||||  ||||||||||| || || |||| ||||||||| |||||||    
T  7725884 aaaatagcatttcgtcccccaaaaatcgtataaaacaaaaaattattcaattccataaa 7725942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 31 - 183
Target Start/End: Complemental strand, 31644615 - 31644462
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | || |||||||||||| |||||  || ||||| | | | ||||||||||||||     
T  31644615 acaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagcaag-acaaatactcatatttttgtccctcac 31644517  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaata 183  Q
     |||||||| ||||| ||||||||  ||||||||||||| | | |||||||||||    
T  31644516 caaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaata 31644462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 114 - 236
Target Start/End: Complemental strand, 40182549 - 40182427
Alignment:
Q  114 atttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagac 213  Q
    ||||||||||||||  |||||||| ||||| ||||||||  | ||||||||||| | | |||||||||||   |||||||  |||||||||||| || ||    
T  40182549 atttttgtccctcaccaaaccacatcacaactttttgtcccatgtacaagttgtctaaaataccaaaatagcattttgtctctcaaaaatcgtataaaac 40182450  T
Q  214 caaaagttattcaataccataaa 236  Q
     |||| ||| ||||| |||||||    
T  40182449 aaaaaattactcaatgccataaa 40182427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 166
Target Start/End: Original strand, 7770192 - 7770342
Alignment:
Q  18 aggatatgatatgacaagtctagttatgctgtgtttgatttgtaaact-gttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaat 115  Q
    |||| ||||||  |||| ||||||| | | |||||||||||||||| | |||| ||| | || |||||||||||| ||| || ||||||||||   | ||    
T  7770192 aggacatgatagaacaactctagttgtccagtgtttgatttgtaaaattgtttcaggtacaggacaaactggaggcaagggacaggacaaaaacacatat 7770291  T
Q  116 ttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttg 166  Q
    |||||||| |||  |||||||| ||||| ||||||||  ||||||||||||    
T  7770292 ttttgtccttcaccaaaccacagcacaactttttgtcccacgtacaagttg 7770342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 228
Target Start/End: Complemental strand, 24036383 - 24036201
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||| ||| |||||| ||| | || ||||| |||||| ||| || |||||||||  | | ||||||||||||||  |||||||| ||||| |    
T  24036383 gtgtttgatttggaaaactgtttcaggtacagcacaaattggaggcaagggacaggacaaaatctcatatttttgtccctcaccaaaccacatcacaact 24036284  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
    |||| ||  ||||||||||||| | | |||||||||||   |||||  |  ||||||||||| || || |||| |||||||||    
T  24036283 ttttatcccacgtacaagttgtctaaaataccaaaataacattttgcaccccaaaaatcgtataaaacaaaaaattattcaat 24036201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 254
Target Start/End: Complemental strand, 41459738 - 41459533
Alignment:
Q  51 tttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttt 148  Q
    ||||||||||||| |||||| ||| | || |||||||||||| ||| || | || ||||| | | ||||||||||||||  |||||| | ||||| ||||    
T  41459738 tttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaaga-aaaaactcatatttttgtccctcaccaaaccagagcacaactttt 41459640  T
Q  149 tgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaatacca-taaatgtttggcctg 247  Q
    |||   ||||||||||||| | | ||| |||||||   |||||||| |||||||||||| || || |||| ||| ||||| ||| ||||| |||| ||||    
T  41459639 tgttccacgtacaagttgtctaaaatatcaaaataacattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccattaaatttttgtcctg 41459540  T
Q  248 tgttgtt 254  Q
    || ||||    
T  41459539 tgctgtt 41459533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 49 - 136
Target Start/End: Original strand, 37148533 - 37148622
Alignment:
Q  49 tgtttgatttgtaaa-ctgttttagggataga-caaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccac 136  Q
    ||||||||||||||| |||||| ||||| ||| ||||||||||| ||| ||  ||||||||| |||||||||||| |||||  |||||||    
T  37148533 tgtttgatttgtaaaactgtttcagggacagaacaaactggaggcaagggacgggacaaaaactgaaatttttgttcctcaccaaaccac 37148622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 101 - 236
Target Start/End: Original strand, 22493417 - 22493551
Alignment:
Q  101 gacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaa 200  Q
    |||||||| | | ||||||||||||||  |||||||| ||||| ||||||||  ||||||||||||| | | ||| |||||||   ||||||||  ||||    
T  22493417 gacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcacacgtacaagttgtctaaaatatcaaaatagcattttgtcc-gcaaa 22493515  T
Q  201 aatcgtacaagaccaaaagttattcaataccataaa 236  Q
    ||||||| || || |||| ||| ||| | |||||||    
T  22493516 aatcgtataaaacaaaaaattactcattgccataaa 22493551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 101 - 207
Target Start/End: Complemental strand, 1338718 - 1338612
Alignment:
Q  101 gacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaa 200  Q
    |||||||| ||||||| |||||  | ||||||  |||| |||||||||||| | |  |||||||||| | | ||| ||||||| | ||||||||||||||    
T  1338718 gacaaaaactgaaattcttgtctttaattaaattacaagacaattttttgtataaattacaagttgtctaaaatatcaaaataattttttgtccatcaaa 1338619  T
Q  201 aatcgta 207  Q
     ||||||    
T  1338618 tatcgta 1338612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 39 - 183
Target Start/End: Original strand, 32092916 - 32093061
Alignment:
Q  39 agttatgctgtgtttgatttgtaaact-gttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccac 136  Q
    |||| ||| |||||||||||||||| | |||| ||| | || ||||| |||||| ||  || |||||||||| |||||||||||| |||||  |||||||    
T  32092916 agttgtgcagtgtttgatttgtaaaattgtttcaggaacaggacaaattggaggcaaaggataggacaaaaactgaaatttttgt-cctcaccaaaccac 32093014  T
Q  137 aacacaattttttgtcttacgtacaagttgtatgatataccaaaata 183  Q
    | ||||| ||||||||  |||||||| || | | | |||||||||||    
T  32093015 agcacaactttttgtcccacgtacaaattatctaaaataccaaaata 32093061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 241
Target Start/End: Complemental strand, 24206493 - 24206328
Alignment:
Q  77 agacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatac 176  Q
    ||||||||| |||| |||||| | |||||||    ||||| || | |||||||||||||||||| || ||||||| |  |||||||||| | | | ||||    
T  24206493 agacaaactagaggcaagagacaagacaaaaccataaattcttcttcctcattaaaccacaacataactttttgtttctcgtacaagttatctaaaatac 24206394  T
Q  177 caaaatattcttttgtcca-tcaaaaatcgtacaagaccaaaagttattcaataccataaatgttt 241  Q
     |||||| |||| || ||| | ||||||||||  ||||||| | |||||||| | |||||| ||||    
T  24206393 taaaatagtcttatgcccacttaaaaatcgtatgagaccaacaattattcaacaacataaaagttt 24206328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 3e-31; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 48 - 254
Target Start/End: Original strand, 32766441 - 32766650
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaa-t 144  Q
    |||||||||||||||| |||||| ||| | | ||||||||||||| ||| || |||||||||| ||| ||||||||||||||  |||||||||||||| |    
T  32766441 gtgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaagggacaggacaaaaactgatatttttgtccctcaccaaaccacaacacaact 32766540  T
Q  145 tttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaatgtttggc 244  Q
    |||||||| |||||||| ||||| | | |||||||||||   ||| ||||  ||||||||||| || || |||| ||||||||| |||||||  |||| |    
T  32766541 tttttgtcctacgtacaggttgtctaaaataccaaaataacatttcgtcctccaaaaatcgtataaaacaaaaaattattcaatgccataaaaatttgtc 32766640  T
Q  245 ctgtgttgtt 254  Q
    ||||||||||    
T  32766641 ctgtgttgtt 32766650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 49 - 183
Target Start/End: Original strand, 41366048 - 41366184
Alignment:
Q  49 tgtttgatttgt-aaactgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattt 146  Q
    |||||||||||| |||| |||| ||||| | ||||||||||||| |||||| |||||||||| ||||||||||||||||||  |||||||||||||||||    
T  41366048 tgtttgatttgtgaaacagtttcagggacatgacaaactggaggcaagagataggacaaaaactgaaatttttgtccctcaccaaaccacaacacaattt 41366147  T
Q  147 tttgtcttacgtacaagttgtatgatataccaaaata 183  Q
    ||||||| || |||||||||| | | |||||||||||    
T  41366148 tttgtctcacatacaagttgtctaaaataccaaaata 41366184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 48 - 236
Target Start/End: Original strand, 5278771 - 5278961
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | | ||||||||||||| ||| || |||||||||| | | ||||||||||||||  |||||||| |||||||    
T  5278771 gtgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaatt 5278870  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    |||||||  ||||||||||||| | | |||||||||||   |||||||| |||||||||||| || || |||| ||| ||||| |||||||    
T  5278871 ttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccttcaaaaatcgtataaaacaaaaaattactcaatgccataaa 5278961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 31 - 236
Target Start/End: Original strand, 9732850 - 9733057
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | || |||||||||||| ||| || | |||||||| | | ||||||||||||||     
T  9732850 acaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaagacaaaaactcatatttttgtccctcac 9732949  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||||||||| ||||||||  ||||||||||||| | | ||| |||||||   |||||||| |||||||||||| || || |||| |||||||||    
T  9732950 caaaccacaacacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattattcaat 9733049  T
Q  229 accataaa 236  Q
     |||||||    
T  9733050 gccataaa 9733057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 48 - 236
Target Start/End: Complemental strand, 35114938 - 35114748
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | || ||||||| |||| ||| || |||||||||| | | ||||||||||||||  ||||||||||||||||    
T  35114938 gtgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaatt 35114839  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    |||||||  ||||||||||||| | | |||||||||||   |||||||| |||||||||||| || || |||| ||| ||| | |||||||    
T  35114838 ttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcattgccataaa 35114748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 48 - 236
Target Start/End: Complemental strand, 44284782 - 44284592
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | | ||||||||||||| ||| || | |||||||| | | |||||||||||||| ||||||||| ||||| |    
T  44284782 gtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaagggacaagacaaaaactcatatttttgtccctcactaaaccacagcacaact 44284683  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    |||||||| ||||||||||||| | | ||| |||||||   |||||||| |||||||||||| || || |||| ||| ||||| |||||||    
T  44284682 ttttgtctcacgtacaagttgtctaaaataacaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaa 44284592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 48 - 321
Target Start/End: Complemental strand, 33366763 - 33366487
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | || |||||||||||| ||| || |||||||||| | | |||||||| |||||  |||||||||||||| |    
T  33366763 gtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgttcctcaccaaaccacaacacaact 33366664  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccat-aaatgtttggc 244  Q
    |||| ||  || |||||||||| | | |||||||||||   |||||||| |||||||||||| || || |||| ||||||||| |||| |||  |||| |    
T  33366663 ttttctcccacatacaagttgtctaaaataccaaaataacattttgtccctcaaaaatcgtataaaacaaaaaattattcaatgccataaaaaatttgtc 33366564  T
Q  245 ctgtgttgttatgacttgctttgtgctattatgtcttgtgttgttatgtccgatacttattgtttagcaaatcaaac 321  Q
    ||||| |||| |||||||  |||| || || | |||||| ||||| |||||  |||||  ||||| ||||| |||||    
T  33366563 ctgtgctgttctgacttgtgttgtactgttctatcttgtattgttctgtccagtacttgctgttttgcaaaccaaac 33366487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 31 - 228
Target Start/End: Original strand, 7761493 - 7761692
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | | |||||||| |||| ||| || |||||||||| | | ||||||||||||||     
T  7761493 acaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcac 7761592  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||| ||||| ||||||||| ||||||||||||| | | |||||||||||   |||||||| |||||||||||| || || |||| ||| |||||    
T  7761593 caaaccacagcacaactttttgtctcacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 7761692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 78 - 324
Target Start/End: Complemental strand, 13829559 - 13829313
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatacc 177  Q
    ||||||||||||||||| || |||||||||| |||||||||||||| ||| || |||||| ||||| ||||||||  | ||||||||| | | | | |||    
T  13829559 gacaaactggaggtaagggacaggacaaaaactgaaatttttgtccatcactagaccacatcacaactttttgtcccaggtacaagttatctaaaacacc 13829460  T
Q  178 aaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaatgtttggcctgtgttgttatgacttgctttgtgctattatg 277  Q
    |||||||  ||| |||| ||||||||| || || || |||| |||||||||| ||||||  ||||  ||||| |||| || ||||  ||||||| || ||    
T  13829459 aaaatatcatttcgtccctcaaaaatcatataaaacaaaaaattattcaatatcataaaaatttgttctgtgatgttctgccttgtgttgtgctgttctg 13829360  T
Q  278 tcttgtgttgttatgtccgatacttattgtttagcaaatcaaacgca 324  Q
      ||||  |||| ||||| ||| ||| ||||| ||||| ||||||||    
T  13829359 ctttgtactgttttgtccaataattactgttttgcaaaccaaacgca 13829313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 31 - 207
Target Start/End: Complemental strand, 37308825 - 37308647
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | || |||||||||||| ||| || |||||||||| | | ||||||||||||||     
T  37308825 acaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcac 37308726  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgta 207  Q
     |||||||||||||| ||||||||  |||||||| |||| | | ||||||||||| | |||||||| | ||||||||||    
T  37308725 caaaccacaacacaactttttgtcccacgtacaaattgtctaaaataccaaaatagtattttgtccctaaaaaatcgta 37308647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 31 - 236
Target Start/End: Original strand, 2645007 - 2645213
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | || |||||||||||| ||| ||||||||||||| | | ||||||||||||||     
T  2645007 acaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaag-gagaggacaaaaactcatatttttgtccctcac 2645105  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||| ||||| ||||||||  || |||||||||| | | |||||||||||   |||||| | |||||||||||| || || |||| ||| |||||    
T  2645106 caaaccacagcacaactttttgtcccacatacaagttgtctaaaataccaaaatagcattttgttcctcaaaaatcgtataaaacaaaaaattactcaat 2645205  T
Q  229 accataaa 236  Q
     |||||||    
T  2645206 gccataaa 2645213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 48 - 236
Target Start/End: Complemental strand, 7259050 - 7258859
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | || |||||||||||| ||| || |||||||||| | | ||||||||||||||  |||||||| ||||| |    
T  7259050 gtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaact 7258951  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaat-attcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    |||||||| ||||||||||||| | | |||||||||| |   |||||||| |||||||| ||| || || |||| ||| ||||| |||||||    
T  7258950 ttttgtctcacgtacaagttgtctaaaataccaaaataacatttttgtccctcaaaaattgtataaaacaaaaaattactcaatgccataaa 7258859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 78 - 320
Target Start/End: Complemental strand, 16104395 - 16104152
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatacc 177  Q
    |||||| |||||| ||| || |||||||||| | | ||||||||||||||  |||||||| ||||| ||||||||| |||||||| |||| | | |||||    
T  16104395 gacaaattggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtctcacgtacaaattgtctaaaatacc 16104296  T
Q  178 aaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccat-aaatgtttggcctgtgttgttatgacttgctttgtgctattat 276  Q
    ||||||   |||||||| |||||||||||| || || |||| ||| ||||| |||| |||  |||| ||||||||||| || ||||  |||| || || |    
T  16104295 aaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgccctgtgttgttctgccttgtgttgtactgttct 16104196  T
Q  277 gtcttgtgttgttatgtccgatacttattgtttagcaaatcaaa 320  Q
     ||||||  |||| |||||  ||||| |||||| ||||| ||||    
T  16104195 atcttgtactgttttgtccagtacttgttgttttgcaaaccaaa 16104152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 78 - 236
Target Start/End: Complemental strand, 17540836 - 17540677
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatacc 177  Q
    ||||||||||||| ||| || |||||||||| | | ||||||||||||||  |||||||| ||||| ||||||||  ||||||||||||| | | |||||    
T  17540836 gacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatacc 17540737  T
Q  178 -aaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
     |||||| | |||||||| |||||||||||| || || |||| ||| ||||| |||||||    
T  17540736 aaaaatagtattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaa 17540677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 31 - 236
Target Start/End: Complemental strand, 32498085 - 32497878
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | | ||||||||| ||| ||| || |||||||||| | | |||||||| |||||     
T  32498085 acaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactgaaggcaagggacaggacaaaaactcatatttttgtacctcac 32497986  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||| ||||| ||||||||  ||||||||||||| | | |||||||||||   |||||||| |||||||||||| || || |||| ||| |||||    
T  32497985 caaaccacatcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtccttcaaaaatcgtataaaacaaaaaattactcaat 32497886  T
Q  229 accataaa 236  Q
     |||||||    
T  32497885 gccataaa 32497878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 31 - 236
Target Start/End: Complemental strand, 34338980 - 34338773
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | || |||||||||||| ||| || |||||||||| | | ||||||| ||||||     
T  34338980 acaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgaccctcac 34338881  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||| ||||| ||||||||  ||| ||||||||| | | |||||||||||   |||||||| |||||||||||| || || |||| ||| |||||    
T  34338880 caaaccacagcacaactttttgtcccacgcacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 34338781  T
Q  229 accataaa 236  Q
     |||||||    
T  34338780 gccataaa 34338773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 78 - 236
Target Start/End: Complemental strand, 33889364 - 33889206
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatacc 177  Q
    ||||||||||||| ||| || |||||||||| | | |||||| |||||||  |||||||| ||||| ||||||||  ||||||||||||| | | |||||    
T  33889364 gacaaactggaggcaagggacaggacaaaaactcatatttttttccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaatacc 33889265  T
Q  178 aaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    ||||||   |||||||| ||||||||| || || || |||| ||| |||||||||||||    
T  33889264 aaaataacattttgtccctcaaaaatcatataaaacaaaaaattactcaataccataaa 33889206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 77 - 207
Target Start/End: Original strand, 40832437 - 40832567
Alignment:
Q  77 agacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatac 176  Q
    |||||||||||||| ||| || ||||||||||  || ||||||||||||||  |||||||||||||| ||||||||| |||||||||| || | | ||||    
T  40832437 agacaaactggaggcaagggacaggacaaaaacggatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaagtagtctaaaatac 40832536  T
Q  177 caaaatattcttttgtccatcaaaaatcgta 207  Q
    ||||||| | ||| ||||  |||||||||||    
T  40832537 caaaatagtatttcgtcccccaaaaatcgta 40832567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 31 - 207
Target Start/End: Complemental strand, 42706529 - 42706351
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | || |||||||||||| ||| || | |||||||| | | ||||||||||||||     
T  42706529 acaattctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggataagacaaaaactcatatttttgtccctcac 42706430  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgta 207  Q
     |||||||||||||| ||||||||  || |||||||||| | | |||||||||||   |||||||| ||||||||||||    
T  42706429 caaaccacaacacaactttttgtcccacatacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgta 42706351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 49 - 236
Target Start/End: Original strand, 19513627 - 19513816
Alignment:
Q  49 tgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattt 146  Q
    ||||||||||||||| |||||| ||| | || |||||| ||||| ||  || |||||||||| | | ||||||||||||||  |||||||| ||||| ||    
T  19513627 tgtttgatttgtaaaactgtttcaggtacaggacaaacgggaggcaaaggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactt 19513726  T
Q  147 tttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    ||||||  ||||||||||||| | | |||||||||||   |||||||| ||||||||| || || || |||| ||| |||||||||||||    
T  19513727 tttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcatataaaacaaaaaattactcaataccataaa 19513816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 31 - 236
Target Start/End: Original strand, 3913380 - 3913587
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| ||| ||||||||||||| |||| | |||||||||| | | || |||||||||||     
T  3913380 acaattctagttgtccagtgtttgatttgtaaaactgtttcaggtatatgacaaactggaggcaagaaacaggacaaaaactcacatgtttgtccctcac 3913479  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||||||||| |||||||   ||||||||||||| | | |||||||||||   |||||  |  ||||||||||| || || |||  |||||||||    
T  3913480 caaaccacaacacaactttttgttccacgtacaagttgtctaaaataccaaaatagcattttgctccccaaaaatcgtataaaacaaaatattattcaat 3913579  T
Q  229 accataaa 236  Q
     |||||||    
T  3913580 gccataaa 3913587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 36 - 228
Target Start/End: Original strand, 12672399 - 12672593
Alignment:
Q  36 tctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaac 133  Q
    ||||||| | |||||||||||||||||| |||||| ||| |||| |||||||||||| ||| ||  ||||||||  | | ||||||||||||||  ||||    
T  12672399 tctagttgtcctgtgtttgatttgtaaaactgtttcaggtataggacaaactggaggcaagggacgggacaaaatctcatatttttgtccctcaccaaac 12672498  T
Q  134 cacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
    |||||||||| ||||| ||  | ||||||||||| | | |||||||||||   ||||||||  ||||||||||| || || |||| ||| |||||    
T  12672499 cacaacacaagtttttatcccaagtacaagttgtctaaaataccaaaatagcattttgtcctccaaaaatcgtataaaacaaaaaattactcaat 12672593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 48 - 236
Target Start/End: Original strand, 30326269 - 30326458
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | || |||||||||||| | | || |||||||||| | | ||||| ||| |||   |||||||| ||||| |    
T  30326269 gtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaggggacaggacaaaaactcatatttt-gtctctcgccaaaccacagcacaact 30326367  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    |||||||| ||||||||||||| | | ||||||||||| | |||||||| |||||||||||| || || |||| ||| ||||| |||||||    
T  30326368 ttttgtctcacgtacaagttgtctaaaataccaaaatagtattttgtccctcaaaaatcgtataaaacaaaaaattactcaattccataaa 30326458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 48 - 236
Target Start/End: Complemental strand, 41934734 - 41934544
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggat-agacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||| ||||||||||| ||| || |||||| ||| |||||||| | || ||| | |||||||| ||||||| |||| | ||| ||||||||||||||| |    
T  41934734 gtgtgtgatttgtaaaactgattaagggatgagataaactggatgcaaaagacaagacaaaaactgaaattcttgtacttcactaaaccacaacacaact 41934635  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    ||||||| |||||| ||||||| | | |||||||||||   ||||||||| |||||||| || |||||  ||| | |||||||||| ||||    
T  41934634 ttttgtcctacgtataagttgtctaaaataccaaaataacattttgtccaccaaaaatcatataagacataaaatcattcaataccgtaaa 41934544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 48 - 262
Target Start/End: Complemental strand, 6896321 - 6896105
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggataga-caaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||||| | | ||||||||||| ||| || |||| ||||| ||||||||||||||||||  |||| ||| ||||| |    
T  6896321 gtgtttgatttgtaaaactgtttcagggacaaaacaaactggaggcaagggacaggataaaaactgaaatttttgtccctcaccaaacaacagcacaact 6896222  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaatgtttggcc 245  Q
    |||||||  ||||||||||||| | | | |||||||||   ||| ||||  |||||  | || || || | || |||||||||||||||||  |||| |     
T  6896221 ttttgtcccacgtacaagttgtctaaaacaccaaaatagcatttcgtcccccaaaaggcatataaaacaagaaattattcaataccataaaaatttgtca 6896122  T
Q  246 tgtgttgttatgacttg 262  Q
    |||||||||||| ||||    
T  6896121 tgtgttgttatgccttg 6896105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 101 - 324
Target Start/End: Original strand, 18126980 - 18127203
Alignment:
Q  101 gacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaa 200  Q
    |||||||  |||| ||||||||  ||||||||||||||||||| ||||||||| | ||||||||| | | | ||| |||||||   ||||||||||||||    
T  18126980 gacaaaagctgaactttttgtctatcattaaaccacaacacaactttttgtctcaagtacaagttatgtaaaatagcaaaataacgttttgtccatcaaa 18127079  T
Q  201 aatcgtacaagaccaaaagttattcaataccataaatgtttggcctgtgttgttatgacttgctttgtgctattatgtcttgtgttgttatgtccgatac 300  Q
     || |||||| || ||| ||| ||||||||| | || ||||| | | | |||||||  |||   |||| || || |||||||||||| | ||||  ||||    
T  18127080 cattgtacaaaacaaaatgttgttcaataccttgaaagtttgtcgtatattgttatatcttatgttgttctgttttgtcttgtgttgatttgtcaaatac 18127179  T
Q  301 ttattgtttagcaaatcaaacgca 324  Q
    ||||  |||| |||||||||||||    
T  18127180 ttatcttttaacaaatcaaacgca 18127203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 114 - 236
Target Start/End: Original strand, 37003873 - 37003995
Alignment:
Q  114 atttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagac 213  Q
    ||||||||||||||  |||||||||||||| ||||||||  |||||||| |||| | | |||||||||||   |||||||| |||||||||||| || |     
T  37003873 atttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaaattgtctaaaataccaaaataacattttgtccctcaaaaatcgtataaaat 37003972  T
Q  214 caaaagttattcaataccataaa 236  Q
     |||| ||||||||| |||||||    
T  37003973 aaaaaattattcaatgccataaa 37003995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 115 - 207
Target Start/End: Complemental strand, 9717308 - 9717216
Alignment:
Q  115 tttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgta 207  Q
    |||||||||||||  |||||||| ||||| ||||||||  ||||||||||||| | | ||||||||||| | |||||||| ||||||||||||    
T  9717308 tttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagtattttgtccctcaaaaatcgta 9717216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 254
Target Start/End: Complemental strand, 26796328 - 26796174
Alignment:
Q  99 aggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatca 198  Q
    |||| ||||||| |||||| ||||||||| |||| |||||| ||| ||||||||  ||||||||||||| | | ||||| ||||| ||||||||||| ||    
T  26796328 aggataaaaattaaaatttgtgtccctcactaaagcacaacgcaactttttgtcacacgtacaagttgtctaaaatacc-aaatagtcttttgtccacca 26796230  T
Q  199 aaaatcgtacaagaccaaaagttattcaataccataaatgtttggcctgtgttgtt 254  Q
    |||||| || |||| | |||  || ||||||||| ||  ||||| | |||||||||    
T  26796229 aaaatcatataagagccaaaaatactcaataccagaatagtttgtcttgtgttgtt 26796174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 233
Target Start/End: Original strand, 35472969 - 35473124
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatacc 177  Q
    |||||| |||||| ||| || | | |||||| ||||||| || | ||||| ||||||||    ||||||||||||  ||||||||||||| | | |||||    
T  35472969 gacaaattggaggcaagggacaagtcaaaaactgaaattcttattcctcactaaaccactctgcaattttttgtcccacgtacaagttgtctaaaatacc 35473068  T
Q  178 aaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccat 233  Q
    | ||||| ||||||||||| |||| | ||| |||||||||| ||||| ||||||||    
T  35473069 ataatatccttttgtccataaaaatttgtataagaccaaaaattatttaataccat 35473124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 321
Target Start/End: Complemental strand, 39461467 - 39461191
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaa---accacaacaca 142  Q
    |||||||||||||||| |||||| ||| | || |||||||||||| ||| || |||||||||||||   |||||||||||||  ||   || ||||||||    
T  39461467 gtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagtgacaggacaaaaattg---tttttgtccctcaccaaatcacaacaacaca 39461371  T
Q  143 attttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccat-aaatgttt 241  Q
    | ||||| ||| ||||||||| ||| | | |||||||||||   |||||||| |||||||||||| || |  |||| ||| ||||| |||| |||  |||    
T  39461370 actttttatctcacgtacaagctgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaataaaaaattactcaatgccataaaaaattt 39461271  T
Q  242 ggcctgtgttgttatgacttgctttgtgctattatgtcttgtgttgttatgtccgatacttattgtttagcaaatcaaac 321  Q
    | | |||| |||| || ||||  |||| || || | |||||| |||||||||||  |||||| ||||| ||||| |||||    
T  39461270 gtcatgtgctgttctgccttgtgttgtactgttctatcttgtattgttatgtccagtacttactgttttgcaaaccaaac 39461191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 31 - 234
Target Start/End: Original strand, 30798408 - 30798614
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaat-tgaaatttttgtccctca 127  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | | ||||||||||||| ||| || |||| |||||  | | ||||||||||||||    
T  30798408 acaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaagggacaggaaaaaaaactcatatttttgtccctca 30798507  T
Q  128 ttaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaa 227  Q
      |||||||| ||||| ||||| ||  ||||||||||| | | | |||||||||||   |||||||| |||||||||||| || || |||| ||| | ||    
T  30798508 ccaaaccacatcacaactttttatcccacgtacaagttatctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactaaa 30798607  T
Q  228 taccata 234  Q
    |||||||    
T  30798608 taccata 30798614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 167
Target Start/End: Original strand, 38993040 - 38993129
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgt 167  Q
    ||||||||||||| ||| || |||||||||| |  ||||||||| |||| | |||||||||||||| ||||||||  |||||||||||||    
T  38993040 gacaaactggaggcaagggacaggacaaaaactacaatttttgttcctcgtcaaaccacaacacaactttttgtcccacgtacaagttgt 38993129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 49 - 167
Target Start/End: Original strand, 38623242 - 38623362
Alignment:
Q  49 tgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattt 146  Q
    ||||||||||||||| |||||| ||||| || ||||||| |||| ||  || | |||||||| ||||||||||||||||||  |||||||| ||||| ||    
T  38623242 tgtttgatttgtaaaactgtttcagggacaggacaaacttgaggcaatggaaaagacaaaaactgaaatttttgtccctcaccaaaccacagcacaactt 38623341  T
Q  147 tttgtcttacgtacaagttgt 167  Q
    ||||||  || ||||||||||    
T  38623342 tttgtcccacatacaagttgt 38623362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 48 - 228
Target Start/End: Complemental strand, 4641667 - 4641487
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | | ||||||||||||||  ||  ||  ||||||||| | ||||||||| ||||  |||||||| ||||| |    
T  4641667 gtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggtgggacgga--acaaaaattcatatttttgtctctcaccaaaccacagcacaact 4641570  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
    |||||||| || |||||||||| | | |||||||||||   |||||| | |||||||||||| || || |||| ||| |||||    
T  4641569 ttttgtctcacatacaagttgtttaaaataccaaaatagcattttgttcctcaaaaatcgtataaaacaaaaaattactcaat 4641487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 106 - 241
Target Start/End: Original strand, 7294389 - 7294523
Alignment:
Q  106 aaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcg 205  Q
    ||||||||||| ||||| || | |||| || |||||| |||||||||| ||||||||||||||  | ||||||||||| |||||| | || ||||| ||     
T  7294389 aaattgaaattcttgtcgctaactaaatcaaaacaca-ttttttgtctcacgtacaagttgtaaaaaataccaaaatagtcttttattcaccaaaactca 7294487  T
Q  206 tacaagaccaaaagttattcaataccataaatgttt 241  Q
    || ||||| ||||||||||  ||| |||||| ||||    
T  7294488 tataagacaaaaagttatttgataacataaaagttt 7294523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 39 - 257
Target Start/End: Complemental strand, 30713022 - 30712799
Alignment:
Q  39 agttatgctgtgtttgatttgtaa-actgttttagggataga-caaactggaggtaagagagaggacaaaaattgaaatttttgtccctc----attaaa 132  Q
    |||||| | ||||||||||||||| ||||||| ||||| ||| ||| ||||||| ||| || |||||| ||| |||||||||||||||||    | | ||    
T  30713022 agttatccagtgtttgatttgtaatactgtttcagggacagaacaacctggaggcaagggacaggacacaaactgaaatttttgtccctcaccaaattaa 30712923  T
Q  133 ccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaatacca 232  Q
    ||||||||||| ||||| ||  ||||| ||||||| | | | ||||||||||  |||  |||  |||||||| || || || |||| |||||||||||||    
T  30712922 ccacaacacaactttttatcccacgtagaagttgtctaaaacaccaaaatatcatttcatcc-ccaaaaatcatataaaacaaaaaattattcaatacca 30712824  T
Q  233 taaatgtttggcctgtgttgttatg 257  Q
    ||||  |||| ||| || |||||||    
T  30712823 taaaaatttgtcctttgctgttatg 30712799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 78 - 236
Target Start/End: Original strand, 10399839 - 10399997
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatacc 177  Q
    |||||||| || | |||| | |||||||||| | | |||||||||| ||| ||||||||||||||| ||||||||| | ||| ||||||| | | |  ||    
T  10399839 gacaaactagatgcaagatacaggacaaaaactcatatttttgtccttcactaaaccacaacacaactttttgtctcatgtataagttgtctaaaaatcc 10399938  T
Q  178 aaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    ||||||   ||||||||  ||||| ||||| || || |||| ||||||||| |||||||    
T  10399939 aaaatagcattttgtcccccaaaagtcgtataaaacaaaaaattattcaatgccataaa 10399997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 78 - 236
Target Start/End: Complemental strand, 11114993 - 11114835
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatacc 177  Q
    ||||||||||||| ||| || |||||||||| | | |||||||| |||||  |||||||| ||||| ||||||||  ||| ||||||||| | | || ||    
T  11114993 gacaaactggaggcaagggacaggacaaaaaatcatatttttgttcctcaccaaaccacatcacaactttttgtcccacgcacaagttgtctaaaattcc 11114894  T
Q  178 aaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    |||||| | ||| ||||   || ||||||| || || |||| ||||||||| |||||||    
T  11114893 aaaatagtatttcgtccgctaacaatcgtataaaacgaaaaattattcaatgccataaa 11114835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 48 - 236
Target Start/End: Complemental strand, 18685989 - 18685799
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | || |||||||||||| ||  || | |||||||| | | ||||||||| ||||  |||||||| ||||| |    
T  18685989 gtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggacaagacaaaaactcatatttttgtctctcaccaaaccacagcacaact 18685890  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    |||||||  ||||||||||||| | | |||  ||||||   |||||||| ||||||||| || || || |||| ||| ||||| |||||||    
T  18685889 ttttgtcccacgtacaagttgtctaaaatattaaaataacattttgtccctcaaaaatcctataaaacaaaaaattactcaatgccataaa 18685799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 78 - 236
Target Start/End: Complemental strand, 42365698 - 42365540
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatacc 177  Q
    ||||||||||||| ||| || | |||||||| | | |||||||||| |||| |||||||||||||| ||||| | | ||| ||||||||| | | |||||    
T  42365698 gacaaactggaggcaagggacaagacaaaaactcatatttttgtccttcatcaaaccacaacacaactttttatatcacggacaagttgtctaaaatacc 42365599  T
Q  178 aaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    ||||||   ||||||||   ||||||| || || || |||| ||| ||||| |||||||    
T  42365598 aaaataacattttgtcccctaaaaatcatataaaacaaaaaattactcaatgccataaa 42365540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 81 - 182
Target Start/End: Original strand, 16177855 - 16177956
Alignment:
Q  81 aaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaa 180  Q
    |||||||||| ||  || |||||| ||| ||| ||||||||| || |  |||||||||||||| ||||||||| ||||||||||||| | | ||||||||    
T  16177855 aaactggaggcaatggacaggacataaactgatatttttgtcgcttaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaa 16177954  T
Q  181 at 182  Q
    ||    
T  16177955 at 16177956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 101 - 321
Target Start/End: Complemental strand, 26419021 - 26418800
Alignment:
Q  101 gacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaa 200  Q
    |||||||| | | |||||||| |||||  |||||||| ||||| ||||||||  ||||||||||||| | | |||||||||||   |||| |||  ||||    
T  26419021 gacaaaaactcatatttttgttcctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttatcccccaaa 26418922  T
Q  201 aatcgtacaagaccaaaagttattcaataccat-aaatgtttggcctgtgttgttatgacttgctttgtgctattatgtcttgtgttgttatgtccgata 299  Q
    ||| ||| || || |||| ||| ||| | |||| |||| |||| | ||||||||| || ||||| ||||||| || |||||||   |||| ||||  |||    
T  26418921 aattgtataaaacaaaaaattactcattgccataaaatttttgtcatgtgttgttctgccttgcgttgtgctgttctgtcttgcactgttctgtcaaata 26418822  T
Q  300 cttattgtttagcaaatcaaac 321  Q
    |||| ||||| ||||| |||||    
T  26418821 cttactgttttgcaaaccaaac 26418800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 84 - 204
Target Start/End: Original strand, 12939275 - 12939395
Alignment:
Q  84 ctggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaata 183  Q
    ||||||| ||| || | |||||||| ||| |||||||||| |||  |||||||| ||||| ||||| ||| ||||||||||||| | | |||||||||||    
T  12939275 ctggaggcaagggacatgacaaaaactgatatttttgtccttcaccaaaccacagcacaactttttatctcacgtacaagttgtctaagataccaaaata 12939374  T
Q  184 ttcttttgtccatcaaaaatc 204  Q
       ||||||||  ||||||||    
T  12939375 acattttgtcccccaaaaatc 12939395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 129 - 200
Target Start/End: Original strand, 13249420 - 13249491
Alignment:
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaa 200  Q
    ||||||||||||||||||||||||  | ||||||||||| | | ||| |||||||  |||||||||||||||    
T  13249420 taaaccacaacacaattttttgtccaaagtacaagttgtttaaaatatcaaaatagacttttgtccatcaaa 13249491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 130 - 228
Target Start/End: Complemental strand, 2086141 - 2086043
Alignment:
Q  130 aaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
    ||||||||  |||| ||||||| | ||||||||||||| ||| |||||||||||   |||||||| |||||||||||| || || |||| ||| |||||    
T  2086141 aaaccacagtacaactttttgtttcacgtacaagttgtctgaaataccaaaataacattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 2086043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 167
Target Start/End: Complemental strand, 40692467 - 40692329
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgt-aaactgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||| |||||| ||||||||||||| | | ||||||||||||  ||| || |||||||||| |   ||||||||||||||     
T  40692467 acaactctagttgtccagtgtttaatttgtgaaactgttttaggtacaagacaaactggagacaagggacaggacaaaaactcgtatttttgtccctcac 40692368  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgt 167  Q
     ||||||||  |||| ||||||||  |||||||||||||    
T  40692367 caaaccacagaacaactttttgtcccacgtacaagttgt 40692329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 181
Target Start/End: Original strand, 26981701 - 26981781
Alignment:
Q  101 gacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaa 181  Q
    |||||||| | | ||||||||||||||  ||||||||||| || |||||||  |||||||||||||| | | |||||||||    
T  26981701 gacaaaaactcatatttttgtccctcaccaaaccacaacaaaactttttgttctacgtacaagttgtctaaaataccaaaa 26981781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 75 - 151
Target Start/End: Complemental strand, 29104320 - 29104244
Alignment:
Q  75 atagacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgt 151  Q
    ||||||||||| ||  |||||||  ||||||||||| ||||| ||||  ||||||||| ||||||||||| ||||||    
T  29104320 atagacaaactagaaataagagacgggacaaaaattaaaattcttgtttctcattaaatcacaacacaatattttgt 29104244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 167
Target Start/End: Complemental strand, 1247258 - 1247179
Alignment:
Q  88 aggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgt 167  Q
    |||||||||| |||||||||  | | ||||||||||||||  |||||||  ||||| ||||||||  |||||||||||||    
T  1247258 aggtaagagacaggacaaaatctcatatttttgtccctcaccaaaccactgcacaactttttgtcccacgtacaagttgt 1247179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 6453328 - 6453370
Alignment:
Q  190 tgtccatcaaaaatcgtacaagaccaaaagttattcaataccat 233  Q
    |||||||||||| ||||| |||||||||||||||||||||||||    
T  6453328 tgtccatcaaaa-tcgtataagaccaaaagttattcaataccat 6453370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 130 - 228
Target Start/End: Complemental strand, 20907658 - 20907560
Alignment:
Q  130 aaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
    ||||||||  ||||||||||||| || |||||| |||||| | |||| ||||||   |||| |||  |||||||||||||| || |||| |||||||||    
T  20907658 aaaccacagaacaattttttgtcctatgtacaaattgtataaaatactaaaataacattttatcccccaaaaatcgtacaaaacaaaaaattattcaat 20907560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 151
Target Start/End: Complemental strand, 8112453 - 8112348
Alignment:
Q  48 gtgtttgatttgtaaact-gttttagggataga-caaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| | |||| ||| | ||| ||||||||||| |||||| |  ||||||| | | ||||||||| ||||  |||||||||||||| |    
T  8112453 gtgtttgatttgtaaaattgtttcaggtacagaacaaactggaggcaagagacaatacaaaaactcatatttttgtctctcaccaaaccacaacacaact 8112354  T
Q  146 ttttgt 151  Q
    ||||||    
T  8112353 ttttgt 8112348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 28824494 - 28824615
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | || ||| |||||||  ||| |  |||||||||| | | ||||||||||||||  |||||||| ||||| |    
T  28824494 gtgtttgatttgtaaaactgtttcaggtacagcacatactggagtcaagggtcaggacaaaaactcatatttttgtccctcaccaaaccacatcacaact 28824593  T
Q  146 ttttgtcttacgtacaagttgt 167  Q
    |||| ||| |||| ||||||||    
T  28824594 ttttatctcacgtgcaagttgt 28824615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 92 - 152
Target Start/End: Original strand, 35170196 - 35170256
Alignment:
Q  92 aagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtc 152  Q
    |||||| | ||||||||||||||||||||||||||  | ||| ||||||||| ||| ||||    
T  35170196 aagagacacgacaaaaattgaaatttttgtccctcgctgaacaacaacacaactttctgtc 35170256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 105 - 241
Target Start/End: Original strand, 33546 - 33682
Alignment:
Q  105 aaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatc 204  Q
    |||| ||||||| ||||||||||| |||||||||||||| ||||||||  |||||||| |||||| | |||||||||||  |||||||||||||||| |     
T  33546 aaaaatgaaattcttgtccctcatcaaaccacaacacaactttttgtcccacgtacaaattgtataaaataccaaaataggcttttgtccatcaaaactt 33645  T
Q  205 gtacaagaccaaaagttattcaataccataaatgttt 241  Q
    ||| |||||||||| |||||||||| |||||| ||||    
T  33646 gtataagaccaaaaattattcaatatcataaaagttt 33682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 1e-30; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 78 - 254
Target Start/End: Complemental strand, 10485278 - 10485102
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatacc 177  Q
    ||||||||||||| |||||| |||||||||| ||| ||||||||||||||  |||||||| ||||| ||||||||  ||||||||||||| | | ||| |    
T  10485278 gacaaactggaggcaagagacaggacaaaaactgatatttttgtccctcagcaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatatc 10485179  T
Q  178 aaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaatgtttggcctgtgttgtt 254  Q
    ||||||   ||||||||  ||||||||||| || || |||| |||||||||  ||||||| |||| |||||||||||    
T  10485178 aaaatagcattttgtcccccaaaaatcgtataaaacaaaaaattattcaatgtcataaatatttgtcctgtgttgtt 10485102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 31 - 236
Target Start/End: Complemental strand, 3259853 - 3259646
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | || |||||||||||| |||||| |||||||||| | | ||||||||||||||     
T  3259853 acaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagacaggacaaaaactcatatttttgtccctcac 3259754  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||||||||| ||||| ||  ||||||||||||| | | |||||||||||   |||||||| |||||||||||| || || |||| ||| |||||    
T  3259753 caaaccacaacacaactttttatcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 3259654  T
Q  229 accataaa 236  Q
     |||||||    
T  3259653 gccataaa 3259646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 48 - 241
Target Start/End: Complemental strand, 28068962 - 28068769
Alignment:
Q  48 gtgtttgatttgtaaact-gttttagggataga-caaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| | | |||||||| | | |||| |||||||||| ||  ||||| ||| ||||||| |||||||| | ||||| |||| ||||||    
T  28068962 gtgtttgatttgtaaaattggtttagggaaataacaaaatggaggtaagggacgggacataaagtgaaattcttgtcccttactaaacaacaatacaatt 28068863  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaatgttt 241  Q
    ||||||||||||||||||| |||| | |||||||||||   ||||||||| ||||| | ||| |||||||||| |||| |||||| ||||| ||||    
T  28068862 ttttgtcttacgtacaagtggtataaaataccaaaata--gttttgtccaccaaaagtggtataagaccaaaaattatacaatactataaaagttt 28068769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 31 - 236
Target Start/End: Original strand, 3932766 - 3932973
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | || |||||||||||| ||| |  |||||||||| | | ||||||||| ||||     
T  3932766 acaattctagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaggggcaggacaaaaactcatatttttgtctctcac 3932865  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||| ||||| ||||||||  ||||||||||||| | | |||||||||||   |||||||| |||||||||||| || || |||| |||||||||    
T  3932866 caaaccacatcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtccctcaaaaatcgtataaaacaaaaaattattcaat 3932965  T
Q  229 accataaa 236  Q
     |||||||    
T  3932966 gccataaa 3932973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 48 - 201
Target Start/End: Complemental strand, 24203515 - 24203360
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||||||| | || |||||||||||| |||||| |||||||||| | | ||||||||||||||  |||||||| ||||| |    
T  24203515 gtgtttgatttgtaaaactgttttaggtacaggacaaactggaggcaagagacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaact 24203416  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaa 201  Q
    |||||||  ||||||||||||| | | |||||||||||   |||||||| ||||||    
T  24203415 ttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtccctcaaaa 24203360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 62 - 183
Target Start/End: Original strand, 9902649 - 9902771
Alignment:
Q  62 aactgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtac 160  Q
    |||||||| ||| |||| ||||||| |||||||| || |||||||||| ||| |||||||||||||||||||||||| ||||| ||||||||  ||||||    
T  9902649 aactgtttcaggtataggacaaactagaggtaagggacaggacaaaaactgatatttttgtccctcattaaaccacagcacaactttttgtcccacgtac 9902748  T
Q  161 aagttgtatgatataccaaaata 183  Q
    ||||||| | | |||||||||||    
T  9902749 aagttgtctaaaataccaaaata 9902771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 36 - 228
Target Start/End: Original strand, 32409816 - 32410010
Alignment:
Q  36 tctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaac 133  Q
    ||||||||| | |||||||||||||||| |||||| ||| | || |||||||||||  ||| || |||||||||| | | ||||||||||||||  ||||    
T  32409816 tctagttatccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagacaagggacaggacaaaaactcatatttttgtccctcaccaaac 32409915  T
Q  134 cacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
    |||| ||||| ||||||||  ||  ||||||||| | | ||||||||||| | |||||||| |||||||||||| || || |||| |||||||||    
T  32409916 cacatcacaactttttgtcccactcacaagttgtctaaaataccaaaatagtattttgtccctcaaaaatcgtataaaacaaaaaattattcaat 32410010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 116 - 236
Target Start/End: Original strand, 29424613 - 29424733
Alignment:
Q  116 ttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagacca 215  Q
    |||||||| ||| ||||| |||||||||||||| | | |||||||||||| | | | |||| |||||| | ||||||||| |||||| ||||||||||||    
T  29424613 ttttgtccatcactaaacgacaacacaatttttagacctacgtacaagttatctaaaatacaaaaatagttttttgtccaccaaaaaacgtacaagacca 29424712  T
Q  216 aaagttattcaataccataaa 236  Q
    ||| |||||||||||||||||    
T  29424713 aaaattattcaataccataaa 29424733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 31 - 236
Target Start/End: Original strand, 10324070 - 10324277
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||| ||||||||| |||||| ||| | || ||||||| |||| ||| || |||||||||| | | ||||||||||||||     
T  10324070 acaactctagttgttcagtgtttaatttgtaaaactgtttcaggtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcac 10324169  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||||||||| ||||||||| ||||||||||||| | | |||||||||||   ||||||||   |||||||||| || || |||| ||| |||||    
T  10324170 caaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaataacattttgtccccaaaaaatcgtataaaacaaaaaattactcaat 10324269  T
Q  229 accataaa 236  Q
     |||||||    
T  10324270 cccataaa 10324277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 48 - 236
Target Start/End: Original strand, 11613767 - 11613957
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | || ||||| |||||  |||  | |||||||||| | | ||||||||||||||  |||||||| ||||| |    
T  11613767 gtgtttgatttgtaaaactgtttcaggtacaggacaaaatggagacaaggaacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaact 11613866  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    |||||||  ||||||||||||||| | |||||||||||   |||||||| |||||||||||| || || |||| ||| ||||| |||||||    
T  11613867 ttttgtcccacgtacaagttgtataaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaa 11613957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 48 - 236
Target Start/End: Complemental strand, 17867988 - 17867798
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | || |||||||||||| ||| || | || ||||| | | ||||||||||||||| |||||||| ||||| |    
T  17867988 gtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaagataaaaactcatatttttgtccctcatcaaaccacagcacaact 17867889  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    |||||||  |||||||| |||| | | |||||||||||   |||||||| |||||||||||| || || |||| ||| ||||| |||||||    
T  17867888 ttttgtcccacgtacaaattgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaa 17867798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 48 - 236
Target Start/End: Complemental strand, 17877771 - 17877581
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | || |||||||||||| ||| || | || ||||| | | ||||||||||||||| |||||||| ||||| |    
T  17877771 gtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaagataaaaactcatatttttgtccctcatcaaaccacagcacaact 17877672  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    |||||||  |||||||| |||| | | |||||||||||   |||||||| |||||||||||| || || |||| ||| ||||| |||||||    
T  17877671 ttttgtcccacgtacaaattgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaa 17877581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 48 - 236
Target Start/End: Original strand, 18597134 - 18597324
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||||||| ||||||| ||||| ||| || | |||||||  ||||||||||||||||||  |||||||||||||| |    
T  18597134 gtgtttgatttgtaaaactgtttcagggatatgacaaaccggaggcaagggacatgacaaaatctgaaatttttgtccctcaccaaaccacaacacaact 18597233  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    |||||||  ||||| ||||||| | | |  | |||||| |  || |||| ||||||||| || || || |||| |||||||||||||||||    
T  18597234 ttttgtcccacgtataagttgtctaaaacgctaaaatagtacttcgtccctcaaaaatcatataaaacaaaaaattattcaataccataaa 18597324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 48 - 236
Target Start/End: Original strand, 32132356 - 32132546
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||||||| | || |||||||||||| ||| || |||||||||| | | ||||||||||||||  || ||||||||||| |    
T  32132356 gtgtttgatttgtaaaactgttttaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaatccacaacacaact 32132455  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    |||||||  ||||||||||||| | | ||| |||||||   ||||||||  ||||||||||| || || | || ||| ||||| |||||||    
T  32132456 ttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtcccccaaaaatcgtataaaacaacaaattactcaatgccataaa 32132546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 48 - 254
Target Start/End: Complemental strand, 10960153 - 10959945
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | || |||||||| ||| ||| || |||||||||| | | ||||||||||||||  |||||||||||||| |    
T  10960153 gtgtttgatttgtaaaactgtttcaggtacaggacaaactgaaggcaagggacaggacaaaaactcatatttttgtccctcaacaaaccacaacacaact 10960054  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaatgtttggcc 245  Q
    |||||||  ||||||||||||| | | |||| ||||||   ||||||||  ||||||||||| || || |||  | ||||||| |||||||  |||| |     
T  10960053 ttttgtcccacgtacaagttgtctaaaatacaaaaatagcattttgtcccccaaaaatcgtataaaacaaaatatcattcaatgccataaaaatttgtca 10959954  T
Q  246 tgtgttgtt 254  Q
    |||||||||    
T  10959953 tgtgttgtt 10959945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 78 - 205
Target Start/End: Complemental strand, 11279249 - 11279122
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatacc 177  Q
    ||||||||||||| | | || |||||||||| | | ||||||||||||||  |||||||||||||| ||||||||| ||||||||||||| | | |||||    
T  11279249 gacaaactggaggcatgggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaatacc 11279150  T
Q  178 aaaatattcttttgtccatcaaaaatcg 205  Q
    ||||||   |||| ||| ||||||||||    
T  11279149 aaaatagcattttatccctcaaaaatcg 11279122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 31 - 207
Target Start/End: Complemental strand, 11382232 - 11382056
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||| ||||||||| |||||| ||| | || |||||||||||| ||| || |||||||||| | | |||||||||  |||     
T  11382232 acaactctagttgtccagtgtttaatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtc--tcac 11382135  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgta 207  Q
     |||||||||||||| ||||||||| ||||||||||||| | | |||||||||||   |||||||| ||||||||||||    
T  11382134 caaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgta 11382056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 31 - 228
Target Start/End: Complemental strand, 24242834 - 24242635
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | || |||||||||||| ||| || |  ||||||| | | ||||||||||||||     
T  24242834 acaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacacaacaaaaactcatatttttgtccctcac 24242735  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||| ||||| ||||||||  ||||||||||||| | | |||||||||||   |||||||| |||||||||||| || || |||| ||| |||||    
T  24242734 caaaccacatcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 24242635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 78 - 236
Target Start/End: Complemental strand, 2615017 - 2614859
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatacc 177  Q
    |||||| |||||| ||| || |||||||||| | | ||||||||||||||  |||||||| ||||| ||||||||  ||||||||||||| | | |||||    
T  2615017 gacaaattggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatacc 2614918  T
Q  178 aaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    ||||||   |||||||| |||||||||||| || |  |||| ||| ||||| |||||||    
T  2614917 aaaatagcattttgtccctcaaaaatcgtataaaataaaaaattactcaatgccataaa 2614859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 118 - 253
Target Start/End: Original strand, 7396173 - 7396306
Alignment:
Q  118 ttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaa 217  Q
    |||||||||| |||||||| |||||| ||||||||| ||||||||||| | | | |||| |||||| | ||||||||||||||||| |||  ||||  ||    
T  7396173 ttgtccctcactaaaccactacacaactttttgtctcacgtacaagttatctaaaatacaaaaatagtgttttgtccatcaaaaatggtatgagac--aa 7396270  T
Q  218 agttattcaataccataaatgtttggcctgtgttgt 253  Q
    | |||||||||||||||||  |||| | ||||||||    
T  7396271 aattattcaataccataaaaatttgtcatgtgttgt 7396306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 49 - 236
Target Start/End: Original strand, 15276914 - 15277103
Alignment:
Q  49 tgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattt 146  Q
    ||||||||||||||| |||||| ||| | || |||||||||||| ||| || |||||||||| | | ||||||||||||||  |||||||| ||||| ||    
T  15276914 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactt 15277013  T
Q  147 tttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    ||| ||  ||||||||||||| | | | | |||||||   |||||||| ||||||||| || || || |||| ||| ||||| |||||||    
T  15277014 tttttcccacgtacaagttgtctaaaagaacaaaatagcattttgtccctcaaaaatcttataaaacaaaaaattactcaatgccataaa 15277103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 49 - 236
Target Start/End: Complemental strand, 34176982 - 34176793
Alignment:
Q  49 tgtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattt 146  Q
    ||||||||||||||| |||||| ||| | | ||||||||||||| ||| || | |||||||| | | ||||||||| ||||  ||| |||| ||||| ||    
T  34176982 tgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaagtgacatgacaaaaactcatatttttgtctctcaccaaatcacagcacaactt 34176883  T
Q  147 tttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    ||||||  |||||||||| || | | |||||||||||   |||||||| |||||||||||| || || |||| ||| ||||| |||||||    
T  34176882 tttgtcccacgtacaagtagtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaa 34176793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 31 - 205
Target Start/End: Complemental strand, 11212427 - 11212251
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | || ||||||||||| |||| || | |||||||| | | | ||||||||||||     
T  11212427 acaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggagataagggacatgacaaaaactcatacttttgtccctcac 11212328  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcg 205  Q
     ||||||||||| ||  |||||||| |||| |||||||| | | |||||||||||   |||||||| ||||||||||    
T  11212327 caaaccacaacataaccttttgtctcacgtgcaagttgtctaaaataccaaaataacattttgtccctcaaaaatcg 11212251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 183
Target Start/End: Original strand, 166899 - 167036
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | || ||||||| |||| ||| || |  ||||||| | | ||||||||||||||  |||||||||||||| |    
T  166899 gtgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagggacataacaaaaactcatatttttgtccctcaccaaaccacaacacaact 166998  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaata 183  Q
    |||||||  ||||||||||||| | | |||||||||||    
T  166999 ttttgtcccacgtacaagttgtctaaaataccaaaata 167036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 183
Target Start/End: Complemental strand, 3379831 - 3379726
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatacc 177  Q
    ||||||||||||| |||||| | |||||||| ||| ||||||||| ||||  |||||| | ||||| ||||||||| || |||||||||| | | |||||    
T  3379831 gacaaactggaggcaagagacaagacaaaaactgatatttttgtcgctcaccaaaccatagcacaactttttgtctcacatacaagttgtcttaaatacc 3379732  T
Q  178 aaaata 183  Q
    ||||||    
T  3379731 aaaata 3379726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 207
Target Start/End: Original strand, 15277288 - 15277417
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatacc 177  Q
    ||||||||||||| ||| || |||||||||| | | ||||||||||||||  |||||||| ||||| ||||| ||  ||||||||||||| | | |||||    
T  15277288 gacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttatcccacgtacaagttgtctaaaatacc 15277387  T
Q  178 aaaatattcttttgtccatcaaaaatcgta 207  Q
    ||||||   |||||||   |||||||||||    
T  15277388 aaaatagcattttgtcttccaaaaatcgta 15277417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 49 - 227
Target Start/End: Complemental strand, 9614126 - 9613946
Alignment:
Q  49 tgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattt 146  Q
    ||||||||||||||| |||||| | ||| || | |||||||||| ||| || | ||||||| ||||| |||||||  |||| |||||| |||||||||||    
T  9614126 tgtttgatttgtaaaactgtttcaaggacaggataaactggaggcaagggacatgacaaaatttgaagtttttgttactcactaaaccgcaacacaattt 9614027  T
Q  147 tttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaa 227  Q
    |||||   ||||| ||||||| | | |||| |||||| |||| ||||||  || |||| || || ||||||| ||||||||    
T  9614026 tttgttccacgtataagttgtctaaaatactaaaataatcttctgtccacaaataatcatataacaccaaaaattattcaa 9613946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 118 - 242
Target Start/End: Original strand, 27824698 - 27824822
Alignment:
Q  118 ttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaa 217  Q
    ||||||||||||| |||||| ||||| ||||||||  |||||| |||| |   | |||| ||||||   ||||||||| |||||||| || |||| ||||    
T  27824698 ttgtccctcattataccacatcacaactttttgtcccacgtacgagttatccaaaatacaaaaatagctttttgtccaacaaaaatcatataagatcaaa 27824797  T
Q  218 agttattcaataccataaatgtttg 242  Q
    | ||||||||||||||||| |||||    
T  27824798 aattattcaataccataaaagtttg 27824822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 48 - 183
Target Start/End: Original strand, 14925432 - 14925569
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | || ||||||| || ||||| || |||||||||| | | ||||||||||||||  ||||||||  |||| |    
T  14925432 gtgtttgatttgtaaaactgtttcaggtacaggacaaactagatgtaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagtacaact 14925531  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaata 183  Q
    |||||||  || |||||||||| | | |||||||||||    
T  14925532 ttttgtcccacttacaagttgtctaaaataccaaaata 14925569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 27 - 242
Target Start/End: Original strand, 35004083 - 35004300
Alignment:
Q  27 tatgacaagtctagttatgctgtgtttgatttgtaaa-ctgttt-tagggatagacaaactggaggtaagagagaggacaaaaattgaaatttttgtccc 124  Q
    |||||||| || |||| ||| |||||||||||||||| | |||| ||||   ||| |||| ||||  |||||| | |||||||| | || |||||||| |    
T  35004083 tatgacaactccagttgtgcggtgtttgatttgtaaaacggtttataggacaagataaaccggagacaagagacaagacaaaaactaaattttttgtctc 35004182  T
Q  125 tcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttatt 224  Q
    ||||  ||||||||||||| | ||||||  ||||||||||| | | | ||| |||||||   ||||||| || |||||| ||| || |||||||  ||||    
T  35004183 tcatataaccacaacacaactctttgtcccacgtacaagttttctaaaatatcaaaatagatttttgtcaataaaaaattgtataataccaaaaactatt 35004282  T
Q  225 caataccataaatgtttg 242  Q
    ||||| |||||| |||||    
T  35004283 caatatcataaaagtttg 35004300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 183
Target Start/End: Original strand, 8177891 - 8177994
Alignment:
Q  79 acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatacca 178  Q
    |||||||||||| ||| || |||| |||||| || |||||||||||| |  |||||||||||||| ||||||||  |||| |||||||| | | ||||||    
T  8177891 acaaactggaggcaagggacaggataaaaat-gatatttttgtcccttaccaaaccacaacacaactttttgtcccacgttcaagttgtctaaaatacca 8177989  T
Q  179 aaata 183  Q
    |||||    
T  8177990 aaata 8177994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 81 - 249
Target Start/End: Original strand, 14808012 - 14808179
Alignment:
Q  81 aaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaa 180  Q
    ||||| |||| ||| || |||| ||||||||| ||||||||||||||  |||||||||||||| ||||||||  ||||| | ||||| | |  |||||||    
T  14808012 aaactagaggcaagggataggataaaaattgatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtataggttgtct-aagtaccaaa 14808110  T
Q  181 atattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaatgtttggcctgtg 249  Q
    |||   |||  |||  ||||||||||| || || |||| ||||||||| |||||||  |||| ||||||    
T  14808111 ataacatttcatcccccaaaaatcgtataaaactaaaaattattcaattccataaaaatttgtcctgtg 14808179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 254
Target Start/End: Original strand, 31870132 - 31870284
Alignment:
Q  102 acaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaa 201  Q
    ||||||| ||| ||||||||||||||  |||||||||||||| ||||||||  ||||| | ||||| | | |||| ||||||   ||| ||||  |||||    
T  31870132 acaaaaactgatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtataggttgtctaaaatacaaaaatagcatttcgtcccccaaaa 31870231  T
Q  202 atcgtacaagaccaaaagttattcaataccataaatgtttggcctgtgttgtt 254  Q
     ||||| || || |||| ||||||||| |||||||  |||| | |||||||||    
T  31870232 ctcgtataaaacaaaaaattattcaatgccataaaaatttgtcatgtgttgtt 31870284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 136 - 286
Target Start/End: Original strand, 15400651 - 15400800
Alignment:
Q  136 caacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataa 235  Q
    |||||||| ||||||||||| |||||| |||| | | ||| ||||||| |||||||||||||| | || |||  |||| ||||   ||||||||||||||    
T  15400651 caacacaactttttgtcttaagtacaaattgtttaaaatatcaaaatagtcttttgtccatcatacattgtatgagacaaaaa---attcaataccataa 15400747  T
Q  236 atgtttggcctgtgttg--ttatgacttgctttgtgctattatgtcttgtgtt 286  Q
    | ||||| | ||| |||  || |||||||  ||||| | ||||||||||||||    
T  15400748 aagtttgtcatgtattgttttttgacttgtattgtgttgttatgtcttgtgtt 15400800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 136 - 286
Target Start/End: Original strand, 15412438 - 15412587
Alignment:
Q  136 caacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataa 235  Q
    |||||||| ||||||||||| |||||| |||| | | ||| ||||||| |||||||||||||| | || |||  |||| ||||   ||||||||||||||    
T  15412438 caacacaactttttgtcttaagtacaaattgtttaaaatatcaaaatagtcttttgtccatcatacattgtatgagacaaaaa---attcaataccataa 15412534  T
Q  236 atgtttggcctgtgttg--ttatgacttgctttgtgctattatgtcttgtgtt 286  Q
    | ||||| | ||| |||  || |||||||  ||||| | ||||||||||||||    
T  15412535 aagtttgtcatgtattgttttttgacttgtattgtgttgttatgtcttgtgtt 15412587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 136 - 286
Target Start/End: Original strand, 15428032 - 15428181
Alignment:
Q  136 caacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataa 235  Q
    |||||||| ||||||||||| |||||| |||| | | ||| ||||||| |||||||||||||| | || |||  |||| ||||   ||||||||||||||    
T  15428032 caacacaactttttgtcttaagtacaaattgtttaaaatatcaaaatagtcttttgtccatcatacattgtatgagacaaaaa---attcaataccataa 15428128  T
Q  236 atgtttggcctgtgttg--ttatgacttgctttgtgctattatgtcttgtgtt 286  Q
    | ||||| | ||| |||  || |||||||  ||||| | ||||||||||||||    
T  15428129 aagtttgtcatgtattgttttttgacttgtattgtgttgttatgtcttgtgtt 15428181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 187 - 262
Target Start/End: Original strand, 32614055 - 32614130
Alignment:
Q  187 ttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaatgtttggcctgtgttgttatgacttg 262  Q
    ||||||||| ||||||||||| |||||||||| ||||  ||||||||||| ||||| | | |||||||||| ||||    
T  32614055 ttttgtccaccaaaaatcgtataagaccaaaaattatataataccataaaagtttgtcatatgttgttatgccttg 32614130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 3290789 - 3290634
Alignment:
Q  80 caaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaa 179  Q
    ||||||||||| ||| || |||||||||| | | |||||||||||| |  |||||||||||||| ||||  ||  ||||| ||||||| | | |||||||    
T  3290789 caaactggaggcaagggacaggacaaaaactcatatttttgtcccttaccaaaccacaacacaactttt--tcccacgtataagttgtctaaaataccaa 3290692  T
Q  180 aatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaat 237  Q
    ||||   |||||||| ||||||||| || || || || | |||||||||  |||||||    
T  3290691 aatagcattttgtccctcaaaaatcatataaaacaaacaattattcaatgtcataaat 3290634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 303
Target Start/End: Original strand, 5650711 - 5650937
Alignment:
Q  77 agacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatac 176  Q
    |||||||||| ||| || ||| | |||||||| |||||||||||| ||||| |||| || | |||||  ||| |||| || || || |||    | ||||    
T  5650711 agacaaactgaaggcaatagatacgacaaaaactgaaatttttgttcctcactaaatcatagcacaacatttggtctcacatataaattgcgcaaaatac 5650810  T
Q  177 caaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaatgtttggcctgtgttgttatgacttgctttgtgctattat 276  Q
    |||| ||   ||||||||| || |||| |||||||| || || | ||||||||||| |||  |||| | | |||||||||| |||| |||||| |||| |    
T  5650811 caaagtagctttttgtccaccacaaattgtacaagatcagaaatcattcaataccacaaaaatttgtcatttgttgttatgtcttgttttgtgttatttt 5650910  T
Q  277 gtcttgtgttgttatgtccgatactta 303  Q
     ||||||| |||||||| | |||||||    
T  5650911 atcttgtgatgttatgttcaatactta 5650937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 48 - 163
Target Start/End: Original strand, 11675350 - 11675467
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | || |||||||||||| ||  || |||||||||| ||| ||||||||| ||||  |||||| ||||||| |    
T  11675350 gtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggacaggacaaaaactgatatttttgtctctcaccaaaccataacacaact 11675449  T
Q  146 ttttgtcttacgtacaag 163  Q
    |||| ||  |||||||||    
T  11675450 ttttatcccacgtacaag 11675467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 78 - 183
Target Start/End: Complemental strand, 18057640 - 18057535
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatacc 177  Q
    |||||||| || ||||| || | |||||||| | | ||||||||||||||  ||||||||  |||| ||||||||  ||||||||||||| | | |||||    
T  18057640 gacaaactagatgtaagggacatgacaaaaactcatatttttgtccctcaccaaaccacagtacaactttttgtcccacgtacaagttgtctaaaatacc 18057541  T
Q  178 aaaata 183  Q
    ||||||    
T  18057540 aaaata 18057535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 78 - 262
Target Start/End: Complemental strand, 17443383 - 17443199
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatacc 177  Q
    |||||||| || | ||| || |||||||||| | | |||||| |||||||  ||||||||  |||| ||||||||  ||||||||||||| | | |||||    
T  17443383 gacaaactagatgcaagggacaggacaaaaactcatatttttatccctcaccaaaccacagtacaactttttgtcccacgtacaagttgtctaaaatacc 17443284  T
Q  178 aaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaatgtttggcctgtgttgttatgacttg 262  Q
    ||||||   ||| ||||  ||||||||||| || ||  ||| |||||||||  |||| |  |||| |||||| ||||||| ||||    
T  17443283 aaaatagcatttcgtcctccaaaaatcgtataaaacataaaattattcaatgtcatacaaatttgtcctgtgctgttatgccttg 17443199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 125 - 165
Target Start/End: Complemental strand, 23636297 - 23636257
Alignment:
Q  125 tcattaaaccacaacacaattttttgtcttacgtacaagtt 165  Q
    ||||||||||||||||||| ||||||||| |||||||||||    
T  23636297 tcattaaaccacaacacaaatttttgtctcacgtacaagtt 23636257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 149
Target Start/End: Complemental strand, 24785153 - 24785105
Alignment:
Q  101 gacaaaaattgaaatttttgtccctcattaaaccacaacacaatttttt 149  Q
    |||||||| ||||||| ||||| |||| |||||||||||||||||||||    
T  24785153 gacaaaaactgaaattcttgtcgctcactaaaccacaacacaatttttt 24785105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 78 - 321
Target Start/End: Original strand, 34683993 - 34684237
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtat-gatatac 176  Q
    ||||||||||||| ||| || | |||||||| | |  |||||||||||||  |||||||||||||| |||||||   ||||||||||||| |  | ||||    
T  34683993 gacaaactggaggcaagggacacgacaaaaactca--tttttgtccctcaccaaaccacaacacaactttttgttccacgtacaagttgtctaaaaatac 34684090  T
Q  177 caaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa--tgtttggcctgtgttgttatgacttgctttgtgctatt 274  Q
    |||||||   ||||||||  ||||||||||| || || |||| ||| ||| |  ||||||  | |||  |||||||||||||| |||   ||||| | |     
T  34684091 caaaatagcattttgtcctccaaaaatcgtataaaacaaaaaattactcattgtcataaacttttttatcctgtgttgttatgccttatgttgtgttgtc 34684190  T
Q  275 atgtcttgtgttgttatgtccgatacttattgtttagcaaatcaaac 321  Q
     ||||||||  |||| ||||| ||||||| ||||| ||||| |||||    
T  34684191 ctgtcttgtactgttttgtccaatacttactgttttgcaaaccaaac 34684237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 2122844 - 2122769
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtct 153  Q
    |||||| || |||||||||| |||||||||||  || |||||||||   | ||||||||||||||| |||||||||    
T  2122844 gacaaattgaaggtaagagacaggacaaaaatataattttttgtccgctactaaaccacaacacaactttttgtct 2122769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 165
Target Start/End: Complemental strand, 32860204 - 32860085
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| | |||| ||||| | ||||||||||||| ||| || | |||||||  || ||||||||||| ||   |||||||| |||||      
T  32860204 gtgtttgatttgtaaaacagtttcagggacatgacaaactggaggcaagggacatgacaaaagctgcaatttttgtccatcgccaaaccacagcacaacc 32860105  T
Q  146 ttttgtcttacgtacaagtt 165  Q
    |||||||| |||||||||||    
T  32860104 ttttgtctcacgtacaagtt 32860085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 78 - 167
Target Start/End: Original strand, 4494122 - 4494212
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaat-tgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgt 167  Q
    ||||||||||||| ||| || ||||||||||  | | ||||||||||||||  ||||||||  |||| ||||||||  |||||||||||||    
T  4494122 gacaaactggaggcaagtgacaggacaaaaaactcatatttttgtccctcaccaaaccacagtacaactttttgtcccacgtacaagttgt 4494212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 113 - 167
Target Start/End: Complemental strand, 29054442 - 29054388
Alignment:
Q  113 aatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgt 167  Q
    ||||||||||||||   |||||||| ||||| ||||||||| |||||||||||||    
T  29054442 aatttttgtccctcgccaaaccacagcacaactttttgtctcacgtacaagttgt 29054388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 152
Target Start/End: Original strand, 1004471 - 1004508
Alignment:
Q  115 tttttgtccctcattaaaccacaacacaattttttgtc 152  Q
    |||||||| |||||||||||||||||||| ||||||||    
T  1004471 tttttgtcactcattaaaccacaacacaactttttgtc 1004508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 27756400 - 27756275
Alignment:
Q  105 aaaattgaaatttttgtccc-tcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaat 203  Q
    ||||||||| ||||| |||| || ||||| |||||||||| ||||||||   |||| ||||||| | | ||| |||||||   |||| ||||  ||| ||    
T  27756400 aaaattgaattttttttcccctcgttaaatcacaacacaactttttgtcccccgtataagttgtctaaaatatcaaaataacattttatccactaaatat 27756301  T
Q  204 cgtacaagaccaaaagttattcaata 229  Q
    ||||||||||||||  ||||||||||    
T  27756300 cgtacaagaccaaagattattcaata 27756275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 69; Significance: 1e-30; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 101 - 254
Target Start/End: Original strand, 34283883 - 34284038
Alignment:
Q  101 gacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatg--atataccaaaatattcttttgtccatca 198  Q
    |||||||||||||||| |||||  ||| ||||||||||||||| ||||| ||| ||||||||||| |||   | ||| ||||||| |||||||||||| |    
T  34283883 gacaaaaattgaaattattgtctttcaataaaccacaacacaactttttatctcacgtacaagttatatataaaatatcaaaatagtcttttgtccataa 34283982  T
Q  199 aaaatcgtacaagaccaaaagttattcaataccataaatgtttggcctgtgttgtt 254  Q
    ||||||||||||| | |||| ||||||||||||||||| ||||| | |||||||||    
T  34283983 aaaatcgtacaaggcaaaaacttattcaataccataaaagtttgtcttgtgttgtt 34284038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 31 - 236
Target Start/End: Original strand, 6711041 - 6711248
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | || ||||||| |||| ||| || |||||||||| | | ||||||||||||||     
T  6711041 acaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcac 6711140  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||||||||||||||||||  ||||||||||||| | | |||||||||||   |||||||| |||||||||||| || || |||| ||| |||||    
T  6711141 caaaccacaacacaattttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 6711240  T
Q  229 accataaa 236  Q
     |||||||    
T  6711241 gccataaa 6711248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 31 - 236
Target Start/End: Original strand, 28340298 - 28340505
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | | ||||||||||||| ||| || | |||||||| | | |||||||||||||||    
T  28340298 acaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaagggacaagacaaaaactcatatttttgtccctcat 28340397  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||| ||||| ||||||||| ||||||||||||| | | |||||||||||   |||||||| |||||||||||| || || |||| ||| |||||    
T  28340398 caaaccacagcacaactttttgtctcacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 28340497  T
Q  229 accataaa 236  Q
     |||||||    
T  28340498 gccataaa 28340505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 48 - 271
Target Start/End: Original strand, 6029313 - 6029538
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggataga-caaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||||| ||| ||||||| ||| ||| || |||||||||| ||||||||||||||||||  |||||||||||||| |    
T  6029313 gtgtttgatttgtaaaactgtttcagggacagaacaaactgaaggcaagggacaggacaaaaactgaaatttttgtccctcaccaaaccacaacacaact 6029412  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaatgtttggcc 245  Q
    |||||||  ||||||||||||| | | | |||||||||   ||| ||||  |||||| | || || || | || |||||||||||||||||  |||| ||    
T  6029413 ttttgtcccacgtacaagttgtctaaaacaccaaaataacatttcgtcccccaaaaagcatataaaacaagaaattattcaataccataaaaatttgtcc 6029512  T
Q  246 tgtgttgttatgacttgctttgtgct 271  Q
    |||| ||||||| ||||  |||||||    
T  6029513 tgtgctgttatgccttgtgttgtgct 6029538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 48 - 228
Target Start/End: Original strand, 42512782 - 42512964
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | || |||||||||||| |||||| |||||||||| ||| |||||||| |||||  |||||||||||||| |    
T  42512782 gtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagacaggacaaaaactgatatttttgtgcctcagcaaaccacaacacaact 42512881  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
    ||||||| ||||||||| |||| | | ||| |||||||   ||||||||  ||||||||||| || || |||| |||||||||    
T  42512882 ttttgtcctacgtacaaattgtctaaaatatcaaaatagaattttgtcccccaaaaatcgtataaaacaaaaaattattcaat 42512964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 48 - 254
Target Start/End: Complemental strand, 31004294 - 31004086
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | || |||||||||||| | | || |||||||||| |||  |||||||||||||  |||||||||||||| |    
T  31004294 gtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcacgggacaggacaaaaactgatgtttttgtccctcaccaaaccacaacacaact 31004195  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaatgtttggcc 245  Q
    |||||||  ||||||||||||| | | ||||||||||| | ||| ||||  |||||||| || || || |||| ||||||||| |||||||  |||| ||    
T  31004194 ttttgtcccacgtacaagttgtctaaaataccaaaatagtatttcgtcccccaaaaatcctataaaacaaaaaattattcaatgccataaaaatttgtcc 31004095  T
Q  246 tgtgttgtt 254  Q
    |||| ||||    
T  31004094 tgtgatgtt 31004086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 31 - 236
Target Start/End: Original strand, 844719 - 844926
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | || ||||||| |||| ||| || |||||||||| | | ||||||||||||||     
T  844719 acaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcac 844818  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||| ||||| ||||||||  ||||||||||||| | | |||||||||||   |||||||| |||||||||||| || || |||| ||| |||||    
T  844819 caaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 844918  T
Q  229 accataaa 236  Q
     |||||||    
T  844919 gccataaa 844926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 81 - 236
Target Start/End: Complemental strand, 12890365 - 12890210
Alignment:
Q  81 aaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaa 180  Q
    |||||||||| ||| || |||||||||| | | ||||||||||||||| |||||||| ||||| ||||||||  ||||||||||||| | | ||||||||    
T  12890365 aaactggaggcaagggacaggacaaaaactcatatttttgtccctcatcaaaccacagcacaactttttgtcccacgtacaagttgtctaagataccaaa 12890266  T
Q  181 atattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    |||   |||||||| |||||||||||| || || |||| ||| ||||| |||||||    
T  12890265 atagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaa 12890210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 31 - 236
Target Start/End: Original strand, 35387306 - 35387513
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | || |||||||||||||||| || |||||||||| | | ||||||||||||||     
T  35387306 acaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggtaagggacaggacaaaaactcatatttttgtccctcac 35387405  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||| ||||| |||||||   ||||||||||||| | | |||||||||||   |||| ||| |||||||||||| || || |||| ||| |||||    
T  35387406 caaaccacagcacaactttttgttccacgtacaagttgtctaaaataccaaaatagcattttatccctcaaaaatcgtataaaacaaaaaattactcaat 35387505  T
Q  229 accataaa 236  Q
     |||||||    
T  35387506 gccataaa 35387513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 78 - 236
Target Start/End: Complemental strand, 7184048 - 7183890
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatacc 177  Q
    ||||||||||||| ||| || |||||||||| | | |||||||||||| |  |||||||||||||| |||||||| |||||||||||||| | | |||||    
T  7184048 gacaaactggaggcaagggacaggacaaaaactcatatttttgtcccttaccaaaccacaacacaactttttgtcctacgtacaagttgtctaaaatacc 7183949  T
Q  178 aaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    || ||| | |||||||  |||||||||||| || || |||| ||| ||||| |||||||    
T  7183948 aatatagtattttgtctctcaaaaatcgtataaaacaaaaaattactcaatgccataaa 7183890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 48 - 236
Target Start/End: Complemental strand, 16387016 - 16386826
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | || ||||||| |||| ||| || |||||||||| | | ||||||||||||||  |||||||| ||||| |    
T  16387016 gtgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaact 16386917  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    |||||||  ||||||||||||| | | |||||||||||   |||||||| |||||||||||| || || |||| ||| ||||| |||||||    
T  16386916 ttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaa 16386826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 30 - 321
Target Start/End: Complemental strand, 42510705 - 42510411
Alignment:
Q  30 gacaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctca 127  Q
    ||||| ||||||| | | |||||||||| ||||| |||||| ||| | || |||||||||||  ||| || |||||||||| | | ||||||||| ||||    
T  42510705 gacaactctagttgtccagtgtttgattcgtaaaactgtttcaggtacaggacaaactggagacaagggacaggacaaaaactcatatttttgtctctca 42510606  T
Q  128 ttaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaa 227  Q
      |||||||| ||||| ||||||||  ||||||||||||| | | |||||||||||   |||||||| |||||||||||| || || |||| ||||||||    
T  42510605 ccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattattcaa 42510506  T
Q  228 taccat-aaatgtttggcctgtgttgttatgacttgctttgtgctattatgtcttgtgttgttatgtccgatacttattgtttagcaaatcaaac 321  Q
    | |||| |||  |||| |||||| |||| || ||||  |||| || || | ||||||  |||| |||||  |||||| ||||| |||||||||||    
T  42510505 tgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttactgttttgcaaatcaaac 42510411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 48 - 271
Target Start/End: Original strand, 15539902 - 15540127
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggataga-caaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| | ||| ||| ||||||||||| |||||| |||||||||  ||||| |||||||  |||  |||||||| ||||| |    
T  15539902 gtgtttgatttgtaaaactgtttcaaggacagaacaaactggaggcaagagacaggacaaaacctgaaacttttgtctttcaccaaaccacagcacaact 15540001  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaatgtttggcc 245  Q
    ||||||| |||||| ||||||| | | | |||||||||   ||||||||  |||||||| || || || |||| |||||||||||||||||   ||| |     
T  15540002 ttttgtcatacgtagaagttgtctaaaacaccaaaataacattttgtcccccaaaaatcatataaaacaaaaaattattcaataccataaaaacttgtca 15540101  T
Q  246 tgtgttgttatgacttgctttgtgct 271  Q
    |||||||||||| ||||  |||||||    
T  15540102 tgtgttgttatgccttgtgttgtgct 15540127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 49 - 236
Target Start/End: Complemental strand, 16451288 - 16451099
Alignment:
Q  49 tgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattt 146  Q
    ||||||||||||||| |||||| ||| | || |||||||||||| ||| || |||||||||| | | ||||||||| ||||  |||||||||||||| ||    
T  16451288 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtctctcaccaaaccacaacacaactt 16451189  T
Q  147 tttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    ||||||  || |||||||||| | | |||||||||||   |||||||| |||||||||||| || || |||| ||| ||||| |||||||    
T  16451188 tttgtcccacatacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaa 16451099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 31 - 234
Target Start/End: Original strand, 45490870 - 45491075
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| | | | || |||||||||||| ||| || | |||||||| | | ||||||||||||||     
T  45490870 acaattctagttgtccagtgtttgatttgtaaaactgtttcaagtacaggacaaactggaggcaagggacatgacaaaaactcatatttttgtccctcac 45490969  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||||||||| ||||||||  ||||||||||||| | | |||||||||||   |||||||| |||||||||||| || || |||| ||| |||||    
T  45490970 caaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 45491069  T
Q  229 accata 234  Q
     |||||    
T  45491070 gccata 45491075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 18 - 236
Target Start/End: Original strand, 26118197 - 26118417
Alignment:
Q  18 aggatatgatatgacaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaat 115  Q
    |||| |||| || |||| ||||||| | | |||||||||||||||| |||||| ||| | || |||||||||||| ||  || |||||||||| | | ||    
T  26118197 aggacatgacataacaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaaggacaggacaaaaactcatat 26118296  T
Q  116 ttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagacca 215  Q
    ||||||||||||  ||| |||| ||||| ||||||||  ||||| ||||||| | | |||||||||||   |||||||| |||||||||||| || || |    
T  26118297 ttttgtccctcaccaaatcacagcacaactttttgtcccacgtaaaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaa 26118396  T
Q  216 aaagttattcaataccataaa 236  Q
    ||| ||||||||| |||||||    
T  26118397 aaaattattcaatgccataaa 26118417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 31 - 236
Target Start/End: Original strand, 30105675 - 30105882
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | || |||||||||||| ||| || |||||||||| | | ||||||||||||||     
T  30105675 acaactctagttgtccagtgtttgatttgtaaaactgtttcaggtaaaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcac 30105774  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||| || || ||||||||  ||||||||||||| | | |||||||||||   |||||||| |||||||||||| || || |||| ||| | |||    
T  30105775 caaaccacagcataactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattacttaat 30105874  T
Q  229 accataaa 236  Q
     |||||||    
T  30105875 gccataaa 30105882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 48 - 204
Target Start/End: Complemental strand, 50540506 - 50540348
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||||||| | || |||||||||||| ||| || |||||| ||| | | |||||||||| |||| |||||||||||||| |    
T  50540506 gtgtttgatttgtaaaactgttttaggtacaggacaaactggaggcaagggacaggacataaactcatatttttgtccttcatcaaaccacaacacaact 50540407  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatc 204  Q
    |||||||  ||||||||||||| | | |||||||||||   ||||||||  ||||||||    
T  50540406 ttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtcccccaaaaatc 50540348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 48 - 236
Target Start/End: Complemental strand, 51264657 - 51264467
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | || |||||||||||| ||| || | |||||||| | | ||||||||||||||  |||||||||||||| |    
T  51264657 gtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaagacaaaaactcatatttttgtccctcaccaaaccacaacacaact 51264558  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    |||||||  ||||||||||||| | | |||| ||||||   |||||||| | |||||||||| || || |||| ||| ||||| |||||||    
T  51264557 ttttgtcccacgtacaagttgtttaaaatactaaaatagcattttgtcctttaaaaatcgtataaaacaaaaaattactcaatgccataaa 51264467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 31 - 204
Target Start/End: Original strand, 1351430 - 1351605
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | || |||||||||||| |||  | |||||||||| | | ||||||||||||||     
T  1351430 acaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaaggaacaggacaaaaactcatatttttgtccctcac 1351529  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatc 204  Q
     |||||||||||||| ||||||||  ||||||||||||| | | |||||||||||   |||||||  |||||||||    
T  1351530 caaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtctctcaaaaatc 1351605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 101 - 324
Target Start/End: Original strand, 11772699 - 11772922
Alignment:
Q  101 gacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaa 200  Q
    |||||||| ||| ||||||||||||||  |||||||| ||||| ||||||||  || ||||| |||| | | ||||||||||| | ||| ||||  ||||    
T  11772699 gacaaaaactgatatttttgtccctcaccaaaccacagcacaactttttgtcccacctacaaattgttttaaataccaaaatagtatttcgtcccccaaa 11772798  T
Q  201 aatcgtacaagaccaaaagttattcaataccataaatgtttggcctgtgttgttatgacttgctttgtgctattatgtcttgtgttgttatgtccgatac 300  Q
    ||||||| || || |||| | |||||| ||||||||  |||| |||||| | || || ||||  ||||| | |||||||||||  ||||||||||  |||    
T  11772799 aatcgtataaaacaaaaaataattcaaaaccataaaaatttgtcctgtgctattctgccttgtgttgtgttgttatgtcttgtactgttatgtccagtac 11772898  T
Q  301 ttattgtttagcaaatcaaacgca 324  Q
    |||  |||| ||||| ||||||||    
T  11772899 ttaccgttttgcaaaccaaacgca 11772922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 101 - 324
Target Start/End: Complemental strand, 25539962 - 25539739
Alignment:
Q  101 gacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaa 200  Q
    |||||||| ||| ||||||||||||||  |||||||||||||| ||||||||  || |||||||||| | | |||||||||||   ||| ||||  ||||    
T  25539962 gacaaaaactgatatttttgtccctcaccaaaccacaacacaactttttgtcccacctacaagttgttttaaataccaaaatagcatttcgtcccccaaa 25539863  T
Q  201 aatcgtacaagaccaaaagttattcaataccataaatgtttggcctgtgttgttatgacttgctttgtgctattatgtcttgtgttgttatgtccgatac 300  Q
    ||||||| || || |||| ||||||||  |||||||  |||| |||||| | || || ||||  ||||  | |||||||||||  ||||||||||  |||    
T  25539862 aatcgtataaaacaaaaaattattcaaagccataaaaatttgtcctgtgctattctgccttgtgttgtattgttatgtcttgtactgttatgtccagtac 25539763  T
Q  301 ttattgtttagcaaatcaaacgca 324  Q
    |||  |||| ||||| ||||||||    
T  25539762 ttaccgttttgcaaaccaaacgca 25539739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 31 - 236
Target Start/End: Complemental strand, 32270532 - 32270325
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | || |||||||||||| ||| || |||||||||| | | ||||||||||||||     
T  32270532 acaactctagttgtccagtgtttgatttgtaaaactgtttcaggtagaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcac 32270433  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||| ||||| ||||||||  | ||||||||||| | | ||| |||||||   |||||||| ||||||||| || || || |||| ||| |||||    
T  32270432 caaaccacagcacaactttttgtcccatgtacaagttgtctaaaatatcaaaatagcattttgtccctcaaaaatcatataaaacaaaaaattactcaat 32270333  T
Q  229 accataaa 236  Q
     |||||||    
T  32270332 gccataaa 32270325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 78 - 236
Target Start/End: Complemental strand, 16437492 - 16437334
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatacc 177  Q
    |||||||| |||| ||  || |||||||||| | | ||||||||||||||  |||||||||||||| ||||||||  ||||||||||||| | | ||| |    
T  16437492 gacaaactagaggcaaaggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatatc 16437393  T
Q  178 aaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    ||||||   |||||||| |||||||||||| || || |||| ||| ||||| |||||||    
T  16437392 aaaatagcattttgtccttcaaaaatcgtataaaacaaaaaattactcaatgccataaa 16437334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 31 - 183
Target Start/End: Complemental strand, 17888127 - 17887973
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | | ||||||||||||| ||| || |||||||||| | | |||||||||||||      
T  17888127 acaactctagttgtccggtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcgc 17888028  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaata 183  Q
     |||||||||||||| ||||||||  ||||||||||||| | | |||||||||||    
T  17888027 caaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaata 17887973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 48 - 183
Target Start/End: Original strand, 13994087 - 13994224
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| | ||| | |||||| |||||| |||  |  ||||||||| ||||||||||||||||||  |||||||||||||| |    
T  13994087 gtgtttgatttgtaaaactgtttcatggacatgacaaattggaggcaaggaactggacaaaaactgaaatttttgtccctcaccaaaccacaacacaact 13994186  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaata 183  Q
    |||||||| | ||||||||||| | | |||||||||||    
T  13994187 ttttgtctcatgtacaagttgtctaaaataccaaaata 13994224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 48 - 207
Target Start/End: Original strand, 26764807 - 26764968
Alignment:
Q  48 gtgtttgatttgta-aactgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||| || ||||||||| | | || |||||||||| ||  || |||||||||| | | ||||||||||||||   ||||||||||||| |    
T  26764807 gtgtttgatttgtacaattgttttaggtacaagataaactggaggcaaaggacaggacaaaaacttatatttttgtccctcaccgaaccacaacacaact 26764906  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgta 207  Q
    |||||||  ||||||||||||| | | ||||||||||| | ||| |||| ||||||||||||    
T  26764907 ttttgtcccacgtacaagttgtctaaaataccaaaataatatttcgtccctcaaaaatcgta 26764968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 50382468 - 50382605
Alignment:
Q  99 aggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatca 198  Q
    |||||||||| |||||||||||||| |||  |||||||||||||| ||||||||  ||||||||||||| | | | || ||||||   |||||||| |||    
T  50382468 aggacaaaaactgaaatttttgtccttcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaacacaaaaataacattttgtccctca 50382567  T
Q  199 aaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    |||||| || || || |||  |||||||||||||||||    
T  50382568 aaaatcatataaaacaaaatattattcaataccataaa 50382605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 114 - 254
Target Start/End: Complemental strand, 38663226 - 38663086
Alignment:
Q  114 atttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagac 213  Q
    ||||||||||||||  |||||||| ||||| ||||||||  ||||||||||||| | | ||| |||||||   |||||||| |||||||||||| || ||    
T  38663226 atttttgtccctcagcaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatatcaaaataacattttgtccctcaaaaatcgtataaaac 38663127  T
Q  214 caaaagttattcaataccataaatgtttggcctgtgttgtt 254  Q
     |||| |||||||||  ||||||  |||| |||||||||||    
T  38663126 aaaaaattattcaatgtcataaaaatttgtcctgtgttgtt 38663086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 51 - 193
Target Start/End: Original strand, 41967864 - 41968008
Alignment:
Q  51 tttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttt 148  Q
    ||||||||||||| |||||| ||| | || ||||||| |||| |||||| | |||||||| | | |||||||||||| |  |||||||||||||| ||||    
T  41967864 tttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagagacaagacaaaaactcatatttttgtcccttaccaaaccacaacacaactttt 41967963  T
Q  149 tgtcttacgtacaagttgtatgatataccaaaatattcttttgtc 193  Q
    ||||| ||||||||||||| | | |||||||||||  ||||||||    
T  41967964 tgtctcacgtacaagttgtctaaaataccaaaatagccttttgtc 41968008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 48 - 254
Target Start/End: Complemental strand, 50304813 - 50304605
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | || |||||||||||| |||| | | |||||||| ||| |||||||||||||   |||||||| ||||| |    
T  50304813 gtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagaaacaagacaaaaactgatatttttgtccctctgcaaaccacagcacaact 50304714  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaatgtttggcc 245  Q
    |||||||| ||||  ||||||| | | ||| |||||||   ||||||||  ||||||||||| || || |||| |||||||||  ||||||  |||| ||    
T  50304713 ttttgtctcacgtttaagttgtctaaaatatcaaaatagcattttgtcctccaaaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgtcc 50304614  T
Q  246 tgtgttgtt 254  Q
    |||| ||||    
T  50304613 tgtgctgtt 50304605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 78 - 236
Target Start/End: Complemental strand, 1601301 - 1601145
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatacc 177  Q
    ||||||||||||| ||| || || ||||||| | |  |||||||||||||  |||||||||||||| ||||||||  || |||||||||| | | |||||    
T  1601301 gacaaactggaggcaagggatagaacaaaaactca--tttttgtccctcaccaaaccacaacacaactttttgtcccacatacaagttgtctaaaatacc 1601204  T
Q  178 aaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    ||||||   ||||||||| |||||||||||||| || |||| ||| ||| | |||||||    
T  1601203 aaaatagcattttgtccaccaaaaatcgtacaaaacaaaaaattactcattgccataaa 1601145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 31 - 201
Target Start/End: Complemental strand, 41973090 - 41972918
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||  | || |||||||||||| ||| || | |||||||| | | ||||||||||||||     
T  41973090 acaactctagttgtccagtgtttgatttgtaaaactgtttcagatacaggacaaactggaggcaagggacatgacaaaaactcatatttttgtccctcac 41972991  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaa 201  Q
     ||||||||  |||| ||||||||| ||||||||||||| | | |||||||||||   |||||||| ||||||    
T  41972990 caaaccacactacaactttttgtctcacgtacaagttgtctaaaataccaaaataacattttgtccctcaaaa 41972918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 183
Target Start/End: Original strand, 24339633 - 24339788
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgta-aactgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctca- 127  Q
    |||| ||||||| | | |||||||||||||| |||||||| ||| | | ||||||||||||| ||| || |||||||||| | | ||||||||||||||     
T  24339633 acaactctagttgttcagtgtttgatttgtataactgtttcaggtacatgacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcac 24339732  T
Q  128 ttaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaata 183  Q
      |||||||||||||| ||||| ||  ||||||||||||| | | |||||||||||    
T  24339733 caaaaccacaacacaactttttttcccacgtacaagttgtctaaaataccaaaata 24339788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 31 - 203
Target Start/End: Original strand, 32289339 - 32289513
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | || ||||| |||||| ||| || | |||||||| | | ||||||||||||||     
T  32289339 acaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaattggaggcaagggacaagacaaaaactcatatttttgtccctcac 32289438  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaat 203  Q
     |||||||| ||||| |||||||   ||||||||||||| | | |||||||||||   |||||||| ||||||||    
T  32289439 caaaccacagcacaactttttgttccacgtacaagttgtttaaaataccaaaatagcattttgtccctcaaaaat 32289513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 48 - 228
Target Start/End: Complemental strand, 39282056 - 39281874
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | || ||||||| || | ||| || |||||||||| | | ||||||||||||||  ||||||||  |||| |    
T  39282056 gtgtttgatttgtaaaactgtttaaggtacaggacaaactagatgcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagtacaact 39281957  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
    ||||||| |||||||||||||| | | |||||||||||   ||| ||||  ||||||||||| || ||  ||| |||||||||    
T  39281956 ttttgtcctacgtacaagttgtctaaaataccaaaataacatttcgtcctccaaaaatcgtataaaacataaaattattcaat 39281874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 65 - 236
Target Start/End: Original strand, 504421 - 504593
Alignment:
Q  65 tgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaag 163  Q
    ||||||||||| | |||||||| |||| ||| || |  ||||||| ||||| ||||||| |||| ||||||| ||||||||||||||||  || || |||    
T  504421 tgttttagggacaagacaaacttgaggcaagggacaacacaaaaactgaaaattttgtctctcactaaaccataacacaattttttgtcccacatagaag 504520  T
Q  164 ttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    |||| | | |||||||| ||   |||||| || ||||||||||| | ||| |||| || | ||||||||||||    
T  504521 ttgtctaaaataccaaagtagctttttgttcaccaaaaatcgtagaggactaaaaattgtccaataccataaa 504593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 173 - 321
Target Start/End: Original strand, 30798830 - 30798978
Alignment:
Q  173 ataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaatgtttggcctgtgttgttatgacttgctttgtgcta 272  Q
    ||||||||||| | | ||||||| ||||||||||| |||||||||| |||||||||| ||||||  ||||   | | ||||| || |||| |||||| |     
T  30798830 ataccaaaatagtttgttgtccaccaaaaatcgtataagaccaaaaattattcaatatcataaaattttgttatatattgttctgtcttgttttgtgatg 30798929  T
Q  273 ttatgtcttgtgttgttatgtccgatacttattgtttagcaaatcaaac 321  Q
    || | ||||||||  || |||| |||||||||||||||||  |||||||    
T  30798930 ttctatcttgtgtcattgtgtcggatacttattgtttagcctatcaaac 30798978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 101 - 233
Target Start/End: Complemental strand, 46447771 - 46447639
Alignment:
Q  101 gacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaa 200  Q
    |||||||| | |||||||| | |||| |||||  ||| ||||| |||||||   ||||||||||| | | | ||| ||||||| ||||||||||||||||    
T  46447771 gacaaaaactaaaatttttattcctccttaaattacatcacaactttttgttccacgtacaagttatctaaaatatcaaaatagtcttttgtccatcaaa 46447672  T
Q  201 aatcgtacaagaccaaaagttattcaataccat 233  Q
    |||||||| || |||  | ||||||||||||||    
T  46447671 aatcgtactaggccagcaattattcaataccat 46447639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 101 - 192
Target Start/End: Complemental strand, 26733662 - 26733571
Alignment:
Q  101 gacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgt 192  Q
    |||||||| ||||||| ||||||| || ||||||| ||||||| |||||| || | ||||||||||| | | ||||||||||| ||||||||    
T  26733662 gacaaaaactgaaattcttgtcccccactaaaccataacacaactttttgcctcatgtacaagttgtctaaaataccaaaatagtcttttgt 26733571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 78 - 236
Target Start/End: Original strand, 6144030 - 6144188
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatacc 177  Q
    ||||||||||||| ||| || |||||||||| || ||||||||||||||   |||||||||||||| ||||| ||  ||||| ||||||| | | | ||     
T  6144030 gacaaactggaggcaagggacaggacaaaaactgcaatttttgtccctcggcaaaccacaacacaactttttctcccacgtagaagttgtctaaaacaca 6144129  T
Q  178 aaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    ||||||   |||||||   |||||||| || || ||  ||| |||||||||||||||||    
T  6144130 aaaataacattttgtcacccaaaaatcatataaaacagaaaattattcaataccataaa 6144188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 31 - 207
Target Start/End: Original strand, 17327644 - 17327822
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||| ||||||||| |||||| ||| | || |||||||||||  ||| || |||||||||| | | ||||||||||||||     
T  17327644 acaactctagttgtccagtgtttaatttgtaaaactgtttcaggtacaggacaaactggagtcaagggacaggacaaaaactcatatttttgtccctcac 17327743  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgta 207  Q
     ||| |||| ||||| ||||||||| | |||||| || | | | ||||||||||| | ||||||||  |||||||||||    
T  17327744 caaatcacagcacaactttttgtctcatgtacaaattatctaaaataccaaaataatattttgtcccccaaaaatcgta 17327822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 48 - 228
Target Start/End: Original strand, 49303366 - 49303547
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| ||| ||||||||||||  ||| || | || ||||| | | |||||||||| |||  |||||||| |||||||    
T  49303366 gtgtttgatttgtaaaactgtttcaggtataagacaaactggagacaagggacaagagaaaaactcatatttttgtccttcaccaaaccacagcacaatt 49303465  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
    |||| || |||||||||||||| | | |||| ||||||   ||||||||  ||||||||||| || || |||| ||| |||||    
T  49303466 ttttatcctacgtacaagttgtctaaaatactaaaataacattttgtcc-ccaaaaatcgtataaaacaaaaaattactcaat 49303547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 121 - 253
Target Start/End: Original strand, 2761643 - 2761774
Alignment:
Q  121 tccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagt 220  Q
    ||||||| ||||||||||||||||||||||||| | |||||| || | | | |||| ||||||   |||||| || |||||||| || || ||||||| |    
T  2761643 tccctcactaaaccacaacacaattttttgtctcaagtacaaattatctaaaatacaaaaatagatttttgt-caacaaaaatcatataaaaccaaaaat 2761741  T
Q  221 tattcaataccataaatgtttggcctgtgttgt 253  Q
    |||||||||| ||||| || || | ||||||||    
T  2761742 tattcaatactataaaagtctgtcatgtgttgt 2761774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 48 - 234
Target Start/End: Original strand, 16476167 - 16476355
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | || ||||||| || | ||| || |||| ||||| | | ||||||||||||||  |||||||  ||||| |    
T  16476167 gtgtttgatttgtaaaactgtttcaggtacaggacaaactagatgcaagggacaggataaaaactcatatttttgtccctcaccaaaccacggcacaact 16476266  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccata 234  Q
    |||||||  ||||||||||||| | | |||||||||||   ||||||||  ||||||| ||| || ||  ||| ||||||||| |||||    
T  16476267 ttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtcccccaaaaattgtataaaacataaaattattcaatgccata 16476355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 49 - 207
Target Start/End: Complemental strand, 16704887 - 16704727
Alignment:
Q  49 tgtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattt 146  Q
    ||||||||||||||| |||||| ||| | | ||||||||||||| ||| || | ||||||||   | |||||||||||| |  |||||||| ||||| |     
T  16704887 tgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaagggacacgacaaaaacatatatttttgtcccttaccaaaccacatcacaactc 16704788  T
Q  147 tttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgta 207  Q
    ||||||| || |||||||||| | | |||||||||||   ||||||||  |||||||||||    
T  16704787 tttgtctcacatacaagttgtctaaaataccaaaatagctttttgtcctccaaaaatcgta 16704727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 101 - 236
Target Start/End: Original strand, 32467887 - 32468023
Alignment:
Q  101 gacaaaaattgaaattt-ttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaa 199  Q
    ||||||||||||||||| || | ||||| |||||||   ||||| |||||||| |||||||||||||| |   ||| ||||||| | |||||| ||  ||    
T  32467887 gacaaaaattgaaatttctttttcctcactaaaccaacgcacaactttttgtcctacgtacaagttgtctacaatatcaaaatagttttttgttcacaaa 32467986  T
Q  200 aaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    ||||| || ||||| |||| ||| |||||||||||||    
T  32467987 aaatcatataagacaaaaaattagtcaataccataaa 32468023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 78 - 242
Target Start/End: Original strand, 47242560 - 47242722
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatacc 177  Q
    ||||||||||||||| | || | |||||||| | |||||||| || ||||||||| |  |  |||| ||||||||| ||||   |||||| | | |||||    
T  47242560 gacaaactggaggtaggtgacaagacaaaaact-aaatttttttctctcattaaaacctagtacaactttttgtctcacgtgttagttgtctaaaatacc 47242658  T
Q  178 aaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaatgtttg 242  Q
    |||||| |||||||| ||| |||||| ||| |||| ||||| |||||||||| | ||||||||||    
T  47242659 aaaatagtcttttgtacat-aaaaattgtataagatcaaaaattattcaatatcgtaaatgtttg 47242722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 85 - 236
Target Start/End: Original strand, 44738093 - 44738243
Alignment:
Q  85 tggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatat 184  Q
    |||||| ||| || ||||| |||| | | ||||||||||||||  |||||||| ||||| ||||||||  ||||||||||||| | | ||| |||||||     
T  44738093 tggaggcaagggacaggaccaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaatagcaaaatag 44738192  T
Q  185 tcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    | |||| | | |||||||||||| || || |||| ||| ||||| |||||||    
T  44738193 t-ttttattcctcaaaaatcgtataaaacaaaaaattactcaatgccataaa 44738243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 101 - 236
Target Start/End: Complemental strand, 45658928 - 45658793
Alignment:
Q  101 gacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaa 200  Q
    |||||||| ||| ||||||||| ||||  |||||||||||||| ||||||||  || |||||||||| | | |||||||||||   ||| ||||  ||||    
T  45658928 gacaaaaactgatatttttgtcgctcaccaaaccacaacacaactttttgtcccacctacaagttgttttaaataccaaaatagcatttcgtcccccaaa 45658829  T
Q  201 aatcgtacaagaccaaaagttattcaataccataaa 236  Q
    |||| || || || |||| ||||||||  |||||||    
T  45658828 aatcatataaaacaaaaaattattcaaagccataaa 45658793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 173 - 320
Target Start/End: Complemental strand, 49799412 - 49799265
Alignment:
Q  173 ataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaatgtttggcctgtgttgttatgacttgctttgtgcta 272  Q
    |||||||||||  ||||||||||| |||||| | | |||||||||  |||||||||| |||||| ||||| | |||| |||| |  ||||  ||| | |     
T  49799412 ataccaaaatagacttttgtccataaaaaattgaataagaccaaatattattcaatatcataaaagtttgtcttgtggtgttctagcttgtattgagttg 49799313  T
Q  273 ttatgtcttgtgttgttatgtccgatacttattgtttagcaaatcaaa 320  Q
    | ||||||||||||||| ||| | ||| |||||||||| || ||||||    
T  49799312 tcatgtcttgtgttgttctgttcaatatttattgtttaacatatcaaa 49799265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 48 - 167
Target Start/End: Complemental strand, 5109890 - 5109769
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | | |||||| |||||| ||| || |||||||||| | |  |||||||||||||  |||||||| ||||| |    
T  5109890 gtgtttgatttgtaaaactgtttcaggtacaagacaaattggaggcaagggacaggacaaaaactcatgtttttgtccctcaccaaaccacatcacaact 5109791  T
Q  146 ttttgtcttacgtacaagttgt 167  Q
    |||||||  | |||||||||||    
T  5109790 ttttgtccaaagtacaagttgt 5109769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 102 - 207
Target Start/End: Original strand, 32215291 - 32215396
Alignment:
Q  102 acaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaa 201  Q
    ||||||||||||||| |||||  | | |||||| ||||| ||||||||||| || ||||||||||  | | | ||||||||| | |||| |||| |||||    
T  32215291 acaaaaattgaaattcttgtcatttactaaaccgcaacataattttttgtcctaagtacaagttgactaaaacaccaaaatagtgttttctccaccaaaa 32215390  T
Q  202 atcgta 207  Q
    ||||||    
T  32215391 atcgta 32215396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 48 - 167
Target Start/End: Complemental strand, 39792969 - 39792848
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||| ||| |||||||||||| | || ||| |||||  || ||| | |||||||||||||||| |||||| |||  |||||||||||||| |    
T  39792969 gtgtttgatttgcaaaactgttttagggacaagataaattggagacaaaagatatgacaaaaattgaaattcttgtccttcaccaaaccacaacacaact 39792870  T
Q  146 ttttgtcttacgtacaagttgt 167  Q
    | |||| | |||||||| ||||    
T  39792869 tgttgtttcacgtacaaattgt 39792848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 236
Target Start/End: Complemental strand, 6771475 - 6771339
Alignment:
Q  101 gacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaa 200  Q
    |||||||| | ||||| ||||| |||| |||| |||||||||| ||||| ||  || |||||||||  | | ||| ||||||| | |||||||||| |||    
T  6771475 gacaaaaactaaaattcttgtcactcactaaatcacaacacaactttttctcccacatacaagttgactaaaatatcaaaataatattttgtccataaaa 6771376  T
Q  201 aa-tcgtacaagaccaaaagttattcaataccataaa 236  Q
    || ||||| ||||| ||   |||||||||||||||||    
T  6771375 aaatcgtataagactaagtattattcaataccataaa 6771339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 16862565 - 16862608
Alignment:
Q  187 ttttgtccatcaaaaatcgtacaagaccaaaagttattcaatac 230  Q
    |||||| ||||||||||||||||||||||||| ||||| |||||    
T  16862565 ttttgtacatcaaaaatcgtacaagaccaaaaattatttaatac 16862608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 48 - 192
Target Start/End: Complemental strand, 7837295 - 7837149
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | | |||||||| |||| ||| || | ||||||||||||| ||||||||| | |  ||| |||| ||||| |    
T  7837295 gtgtttgatttgtaaaactgtttcaggaacatgacaaactagaggcaagggacatgacaaaaattgaattttttgtccattaccaaatcacatcacaact 7837196  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgt 192  Q
    |||||||| ||  ||||||||| | | ||| ||||||| | ||||||    
T  7837195 ttttgtctcacagacaagttgtctaaaatatcaaaatagtattttgt 7837149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 114 - 204
Target Start/End: Original strand, 42705318 - 42705408
Alignment:
Q  114 atttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatc 204  Q
    ||||||||||||||  |||||||||||||| |||| |||  ||||||||||||| ||| ||  |||||||   ||||||||  ||||||||    
T  42705318 atttttgtccctcaccaaaccacaacacaacttttcgtcccacgtacaagttgtctgaaatgtcaaaatagcattttgtcccccaaaaatc 42705408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 242
Target Start/End: Complemental strand, 4895428 - 4895359
Alignment:
Q  173 ataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaatgtttg 242  Q
    |||| |||||| | |||||| || ||||||||||| ||||| |||| ||||||||||| ||||| |||||    
T  4895428 atacaaaaataattttttgttcaccaaaaatcgtataagactaaaacttattcaatactataaacgtttg 4895359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 111 - 236
Target Start/End: Complemental strand, 570485 - 570358
Alignment:
Q  111 gaaatttttgtccctcattaaaccacaa--cacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtac 208  Q
    |||||||||||||||||  |||||||||  ||||| |||||||||  |||| ||||||| | | ||| |||||||   |||| |||| ||||||| |||     
T  570485 gaaatttttgtccctcaccaaaccacaatgcacaactttttgtctcgcgtataagttgtctaaaatatcaaaataacattttttccaccaaaaattgtat 570386  T
Q  209 aagaccaaaagttattcaataccataaa 236  Q
    ||||  ||||  |||||| |||||||||    
T  570385 aagataaaaaagtattcagtaccataaa 570358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 18 - 204
Target Start/End: Original strand, 3414835 - 3415023
Alignment:
Q  18 aggatatgatatgacaagtctagttatgctgtgtttgatttgtaaa-ctgttttaggga-tagacaaactggaggtaagagagaggacaaaaattgaaat 115  Q
    ||||||||| |  |||| |||| |||| | |||||||||||||||| || ||||||| | | ||||| ||||||   || || |||||||||| | | ||    
T  3414835 aggatatgacaaaacaactctaattatccagtgtttgatttgtaaaactattttaggtactggacaatctggagacgagggacaggacaaaaactcatat 3414934  T
Q  116 ttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatc 204  Q
    ||||||||||||  |||| ||| || |||||||| ||  |||||| |||||| | | |||||||||||   ||||||||  ||||||||    
T  3414935 ttttgtccctcaccaaactacatcataattttttatcccacgtactagttgtttaaaataccaaaatagcattttgtcccccaaaaatc 3415023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 48139994 - 48139926
Alignment:
Q  173 ataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaatgttt 241  Q
    |||||||||||   ||||||||| |||  || ||||||||| ||||||| ||||||||| |||||||||    
T  48139994 ataccaaaataaatttttgtccaccaatcattgtacaagacaaaaagttgttcaataccttaaatgttt 48139926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 5e-30; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 101 - 236
Target Start/End: Complemental strand, 48699500 - 48699365
Alignment:
Q  101 gacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaa 200  Q
    |||||||| ||||||| |||||||||| ||||||||||||||| | |||||   ||||||||||||| | | |||||||||||  ||| ||||||  |||    
T  48699500 gacaaaaactgaaattcttgtccctcactaaaccacaacacaactatttgttccacgtacaagttgtctaaaataccaaaatagacttatgtccacaaaa 48699401  T
Q  201 aatcgtacaagaccaaaagttattcaataccataaa 236  Q
    |||||||||||||||||||| |||||||||||||||    
T  48699400 aatcgtacaagaccaaaagtcattcaataccataaa 48699365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 31 - 321
Target Start/End: Complemental strand, 21785045 - 21784752
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | | ||||||||||||| |||||| |||||||||| | | ||||||||||||||     
T  21785045 acaactctagttgttcagtgtttgatttgtaaaactgtttcaggcacatgacaaactggaggcaagagacaggacaaaaactcatatttttgtccctcac 21784946  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||||||||| ||||||||  ||||||||||||| | | |||||||||||   ||||||||  ||||||||||| || ||  ||| ||| |||||    
T  21784945 caaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtcctccaaaaatcgtataaaacataaaattactcaat 21784846  T
Q  229 accataaatg-tttggcctgtgttgttatgacttgctttgtgctattatgtcttgtgttgttatgtccgatacttattgtttagcaaatcaaac 321  Q
     ||||||| | ||||  |||||||||| || ||||  |||| || || | ||||||  |||| |||||  |||||| ||||| ||||| |||||    
T  21784845 gccataaaagatttgttctgtgttgttctgccttgtgttgtactgttctatcttgtactgttttgtccagtacttactgttttgcaaaccaaac 21784752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 31 - 236
Target Start/End: Original strand, 10932478 - 10932685
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | || |||||||||||| ||| || |||||||||| | | ||||||||||||||     
T  10932478 acaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcac 10932577  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||| ||||||||| ||||||||  ||||||||||||| | | |||||||||||   |||||||| |||||||||||| || || |||| ||| |||||    
T  10932578 caaactacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 10932677  T
Q  229 accataaa 236  Q
     |||||||    
T  10932678 gccataaa 10932685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 81 - 236
Target Start/End: Original strand, 32873742 - 32873897
Alignment:
Q  81 aaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaa 180  Q
    |||||||||| ||| || |||||||||| | | |||||||||| |||  |||||||||||||| ||||||||| ||||||||||||| ||| ||||||||    
T  32873742 aaactggaggcaagggacaggacaaaaactcatatttttgtccttcaccaaaccacaacacaactttttgtctcacgtacaagttgtctgaaataccaaa 32873841  T
Q  181 atattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    |||   |||||||| |||||||||||| || || |||| ||| ||||| |||||||    
T  32873842 atagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaa 32873897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 48 - 228
Target Start/End: Complemental strand, 43368358 - 43368176
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| |||| |||||||||||| ||||||  ||||||||| ||| |||||||| |||||  |||||||| ||||| |    
T  43368358 gtgtttgatttgtaaaactgtttcaggtataggacaaactggaggcaagagacgggacaaaaactgatatttttgtgcctcagcaaaccacagcacaact 43368259  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
    ||||||| |||||||||||||| | | ||| |||||||   |||||||| || ||||||||| || || |||| |||||||||    
T  43368258 ttttgtcctacgtacaagttgtctaaaatatcaaaatagcattttgtccctccaaaatcgtataaaacaaaaaattattcaat 43368176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 31 - 236
Target Start/End: Complemental strand, 47953364 - 47953157
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | || |||||||||||| ||| || | |||||||| | | ||||||||||||||     
T  47953364 acaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacatgacaaaaactcatatttttgtccctcac 47953265  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||| ||||| ||||||||  ||||||||||||| | | |||||||||||   |||||||| |||||||||||| || || |||| ||| |||||    
T  47953264 caaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 47953165  T
Q  229 accataaa 236  Q
     |||||||    
T  47953164 gccataaa 47953157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 49 - 236
Target Start/End: Complemental strand, 40753311 - 40753122
Alignment:
Q  49 tgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattt 146  Q
    ||||||||||||||| |||||| ||| | || |||||||||||| ||| || |||||||||| | | ||||||||||||||  ||| |||| ||||| ||    
T  40753311 tgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaatcacagcacaactt 40753212  T
Q  147 tttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    ||||||  ||||||||||||| | | |||||||||||   |||||||| |||||||||||| || || |||| ||| ||||| |||||||    
T  40753211 tttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaa 40753122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 48 - 321
Target Start/End: Complemental strand, 329627 - 329352
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggataga-caaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||||| ||| ||||||||||| ||  || | |||||||| ||||||||||||||||||  |||||||| ||||| |    
T  329627 gtgtttgatttgtaaaactgtttcagggacagaacaaactggaggcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaact 329528  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaatgtttggcc 245  Q
    |||||||  ||||||||||||  | | | |||||||||   ||||||||  |||||||| || || || | || |||||||||||||||||  |||| |     
T  329527 ttttgtcccacgtacaagttgcctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtca 329428  T
Q  246 tgtgttgttatgacttgctttgtgctattatgtcttgtgttgttatgtccgatacttattgtttagcaaatcaaac 321  Q
    |||  ||||||| ||||  ||||||| || ||  ||||  |||| |||||  |||||| ||||| ||||| |||||    
T  329427 tgtactgttatgccttgtgttgtgctgttctgcattgtactgttctgtccagtacttactgttttgcaaaccaaac 329352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 31 - 236
Target Start/End: Original strand, 26994146 - 26994353
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | | ||||||||||||| ||| || |||||||||  | | ||||||||||||||     
T  26994146 acaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaagggacaggacaaaatctcatatttttgtccctcac 26994245  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||| ||||| ||||||||  ||||||||||||| | | |||||||||||   |||||||| | |||||||||| || || |||| ||| |||||    
T  26994246 caaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctaaaaaatcgtataaaacaaaaaattactcaat 26994345  T
Q  229 accataaa 236  Q
     |||||||    
T  26994346 gccataaa 26994353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 31 - 236
Target Start/End: Original strand, 36769490 - 36769697
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | || ||||||| |||| ||| || |||||||||| | | ||||||||||||||     
T  36769490 acaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcac 36769589  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||| ||||| ||||||||  ||||||||||||| | | |||||||||||   |||||||  |||||||||||| || || |||| ||| |||||    
T  36769590 caaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtctctcaaaaatcgtataaaacaaaaaattactcaat 36769689  T
Q  229 accataaa 236  Q
     |||||||    
T  36769690 gccataaa 36769697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 31 - 236
Target Start/End: Original strand, 43158607 - 43158814
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | || |||||||||||| ||| || |||||||||| | | |||||||||||| |     
T  43158607 acaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaggacaaaaactcatatttttgtcccttac 43158706  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||||||||| ||||||||  ||||||||||||| | | | | |||||||   |||||||| |||||||||||| || || |||| ||| |||||    
T  43158707 caaaccacaacacaactttttgtcccacgtacaagttgtctaaaacatcaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 43158806  T
Q  229 accataaa 236  Q
     |||||||    
T  43158807 gccataaa 43158814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 78 - 236
Target Start/End: Original strand, 11321855 - 11322013
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatacc 177  Q
    ||||||||||||| ||  || |||||||||| | | ||||||||||||||  |||||||| ||||| ||||||||  ||||||||||||| | | |||||    
T  11321855 gacaaactggaggcaacggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatacc 11321954  T
Q  178 aaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    ||||||   |||||||| |||||||||||| || || |||| ||| ||||| |||||||    
T  11321955 aaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaa 11322013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 78 - 236
Target Start/End: Original strand, 26371779 - 26371937
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatacc 177  Q
    ||||||||||||| ||| || |||||||||| | | ||||||||||||||  ||| |||| ||||| ||||||||  ||||||||||||| | | ||||     
T  26371779 gacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaatcacagcacaactttttgtcccacgtacaagttgtctaaaatact 26371878  T
Q  178 aaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    ||||||   |||||||| |||||||||||| || || |||| ||||||||| |||||||    
T  26371879 aaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattattcaatgccataaa 26371937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 52 - 236
Target Start/End: Original strand, 30849188 - 30849374
Alignment:
Q  52 ttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatttttt 149  Q
    |||||||||||| |||||||||| | || ||||||||| || ||| || |||||||||| | | ||||||||||||||  |||||||||||||| |||||    
T  30849188 ttgatttgtaaaactgttttaggtacaggacaaactggtggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaacttttt 30849287  T
Q  150 gtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    |||  |  |||||||||||| | |||||||||||   ||||||||  ||||||||||| || || |||| ||| ||||| |||||||    
T  30849288 gtcccatatacaagttgtataaaataccaaaataacattttgtcccccaaaaatcgtataaaacaaaaaattactcaatgccataaa 30849374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 48 - 228
Target Start/End: Complemental strand, 38301499 - 38301318
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | || |||||||||||| |||||| |||||||||| ||| ||||||||||||||  |||||||||||||| |    
T  38301499 gtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagagacaggacaaaaactgatatttttgtccctcagcaaaccacaacacaact 38301400  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
    |||||||  ||| ||||||||| | | ||| |||||||   ||||||||  |||||||||||  | || |||| |||||||||    
T  38301399 ttttgtcccacg-acaagttgtctaaaatatcaaaataacattttgtcccccaaaaatcgtattaaacaaaaaattattcaat 38301318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 78 - 236
Target Start/End: Original strand, 47316668 - 47316826
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatacc 177  Q
    ||||||||||||| ||| || |||||||||| | | ||||||||||||||  |||||||||||||| ||||||||| || | |||||||| | |  ||||    
T  47316668 gacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcacatgcaagttgtctaaattacc 47316767  T
Q  178 aaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    ||||||   |||||||| |||||||||||| || || |||| ||| ||||| |||||||    
T  47316768 aaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaa 47316826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 101 - 294
Target Start/End: Original strand, 29372772 - 29372965
Alignment:
Q  101 gacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaa 200  Q
    |||||||| | |||||||||||| ||| ||||||||||||||| ||| |||   | ||||||||||| | | ||  |||| ||  ||||| |||| ||||    
T  29372772 gacaaaaactaaaatttttgtccgtcactaaaccacaacacaactttctgttccatgtacaagttgtctaaaatttcaaattaaccttttatccaccaaa 29372871  T
Q  201 aatcgtacaagaccaaaagttattcaataccataaatgtttggcctgtgttgttatgacttgctttgtgctattatgtcttgtgttgttatgtc 294  Q
    |||| || |||||||||| ||||| ||||||||||| ||||| | ||| ||||| |||||||| ||||| | || ||||||||| |||| ||||    
T  29372872 aatcatataagaccaaaaattatttaataccataaaagtttgtcttgtattgttctgacttgcgttgtgtttttctgtcttgtgatgttctgtc 29372965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 31 - 228
Target Start/End: Complemental strand, 18386698 - 18386500
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | | ||||||||||||| ||| || ||||||||| |  | ||||||||||||||     
T  18386698 acaattctagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactggaggcaagggacaggacaaaactc-atatttttgtccctcac 18386600  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||| ||||| ||||||||  ||||||||||||| | | |||||||||||   |||||||| |||||||||||| || || |||| ||| |||||    
T  18386599 caaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 18386500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 31 - 236
Target Start/End: Complemental strand, 44748869 - 44748662
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | | |||||||| |||| ||| || || ||||||| | ||||||||||||||||     
T  44748869 acaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacatgacaaactagaggcaagggacagaacaaaaactcaaatttttgtccctcac 44748770  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     ||||||||| |||| ||||||||  ||||||||||||| | | |||||||||||   ||||||||  ||||||||||| || || |||| ||| ||| |    
T  44748769 caaaccacaatacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtcccccaaaaatcgtataaaacaaaaaattactcatt 44748670  T
Q  229 accataaa 236  Q
     |||||||    
T  44748669 gccataaa 44748662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 31 - 167
Target Start/End: Complemental strand, 1870309 - 1870171
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | | || |||||||||| ||| || |||||||||| | | ||||||||||||||     
T  1870309 acaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacaagataaactggaggcaagggacaggacaaaaactcatatttttgtccctcac 1870210  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgt 167  Q
     |||||||||||||| ||||||||  |||||||||||||    
T  1870209 caaaccacaacacaactttttgtcccacgtacaagttgt 1870171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 48 - 183
Target Start/End: Original strand, 41211138 - 41211275
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | | |||||||| |||| ||| || |||||||||| | | ||||||||||||||  |||||||| ||||| |    
T  41211138 gtgtttgatttgtaaaactgtttcaggtacaagacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaact 41211237  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaata 183  Q
    |||||||  ||||||||||||| | | |||||||||||    
T  41211238 ttttgtcccacgtacaagttgtctaaaataccaaaata 41211275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 102 - 314
Target Start/End: Complemental strand, 2049052 - 2048841
Alignment:
Q  102 acaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaa 201  Q
    ||||||||  |||||||||||| ||| |||||||||||| ||  |||||||  ||||| ||||| ||  | |||| |||||| | |||||||||| ||||    
T  2049052 acaaaaatataaatttttgtccatcactaaaccacaacaaaacattttgtcccacgtagaagttataaaaaatacaaaaatagt-ttttgtccataaaaa 2048954  T
Q  202 atcgtacaagaccaaaagttattcaataccataaatgtttggcctgtgttgttatgacttgctttgtgctattatgtcttgtgttgttatgtccgatact 301  Q
    || ||| |||||||||| ||||  |||||||||   ||||  | ||||||||| || ||||  ||||| | || ||||||||||| || ||||  ||||     
T  2048953 attgtataagaccaaaacttatgtaataccatacgagtttatcatgtgttgttctgccttgtgttgtgttgttttgtcttgtgttattttgtctaataca 2048854  T
Q  302 tattgtttagcaa 314  Q
    |||||||||||||    
T  2048853 tattgtttagcaa 2048841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 78 - 254
Target Start/End: Original strand, 15035223 - 15035399
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatacc 177  Q
    ||||||||||| | ||  || ||||| |||||||||||| |||| |||||  | |||||||||||| |||||||   || ||||| |||| | | ||| |    
T  15035223 gacaaactggaagcaaaggacaggacgaaaattgaaattcttgttcctcaccagaccacaacacaactttttgtaccacatacaaattgtctaaaatatc 15035322  T
Q  178 aaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaatgtttggcctgtgttgtt 254  Q
    ||||||   ||||| ||| |||||||||||||| || |||| |||||||||||||||||  |||| | |||||||||    
T  15035323 aaaataacattttgcccaccaaaaatcgtacaaaacaaaaaattattcaataccataaaaatttgtcatgtgttgtt 15035399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 78 - 194
Target Start/End: Original strand, 43189212 - 43189328
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatacc 177  Q
    ||||||||||||||||| || | |||||||| | | ||||||||||||||  |||||||||||||| ||||| ||  ||||||||||||| |   |||||    
T  43189212 gacaaactggaggtaagggacatgacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttatcccacgtacaagttgtctagaatacc 43189311  T
Q  178 aaaatattcttttgtcc 194  Q
    |||||| | ||||||||    
T  43189312 aaaatagtattttgtcc 43189328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 236
Target Start/End: Original strand, 3922624 - 3922831
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||| ||||||||| |||||| ||| | || |||||||||||| ||| || | |||||||| | | |||||||| |||||     
T  3922624 acaactctagttgtccagtgttttatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaagacaaaaactcatatttttgttcctcac 3922723  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||| ||||| ||||||||  ||||||||||| | | | |||||||||||   |||||||| |||||||||||| || || ||||  || |||||    
T  3922724 caaaccacagcacaactttttgtcccacgtacaagttatctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaaatactcaat 3922823  T
Q  229 accataaa 236  Q
     |||||||    
T  3922824 gccataaa 3922831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 236
Target Start/End: Complemental strand, 18470839 - 18470651
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | || |||||||||||| |||| ||  |||||||| | | ||||||||| ||||  |||||||| || || |    
T  18470839 gtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagacag--gacaaaaactcatatttttgtctctcaccaaaccacagcataact 18470742  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    |||||||  ||||||||||||| | | |||||||||||   |||||||| ||||||||| || || || |||| ||| ||||| |||||||    
T  18470741 ttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtccctcaaaaatcatataaaacaaaaaattactcaatgccataaa 18470651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 228
Target Start/End: Complemental strand, 29661497 - 29661298
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgta-aactgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||| ||||| || ||| | | ||||||||||||| ||| || |||||||||| | | ||||||||||||||     
T  29661497 acaactctagttgtccagtgtttgatttgtagaactgattcaggtacatgacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcac 29661398  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||| ||||| ||||| ||  ||||||||||| | | | |||||||||||   ||||||||  ||||||||||| || || |||| ||| |||||    
T  29661397 caaaccacagcacaactttttatcccacgtacaagttatctaaaataccaaaatagcattttgtcccacaaaaatcgtataaaacaaaaaattactcaat 29661298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 101 - 236
Target Start/End: Complemental strand, 46633799 - 46633664
Alignment:
Q  101 gacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaa 200  Q
    |||||||| | | |||||| |||||||  |||||||| ||||| ||||||||  ||||||||||||| | | |||||||||||   |||||||| |||||    
T  46633799 gacaaaaactcatatttttatccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaa 46633700  T
Q  201 aatcgtacaagaccaaaagttattcaataccataaa 236  Q
    ||||||| || || |||| ||| ||||| |||||||    
T  46633699 aatcgtataaaacaaaaaattactcaatgccataaa 46633664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 49 - 262
Target Start/End: Complemental strand, 48445677 - 48445462
Alignment:
Q  49 tgtttgatttgtaaa-ctgttttagggataga-caaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattt 146  Q
    ||||| ||||||||| |||||| ||||| ||| ||||||||||| ||| || | |||||||| |||||||||||||| |||  ||| ||||  |||| ||    
T  48445677 tgtttaatttgtaaaactgtttgagggacagaacaaactggaggcaagggacatgacaaaaactgaaatttttgtccttcaccaaatcacaggacaactt 48445578  T
Q  147 tttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaatgtttggcct 246  Q
    |||||||  | |||||||||| | | | || ||||||   ||||||||  |||||||| || || || | || |||||||||||||||||  |||| | |    
T  48445577 tttgtctcgcatacaagttgtctaaaacacgaaaataacattttgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaatttgtcat 48445478  T
Q  247 gtgttgttatgacttg 262  Q
    ||||||||||| ||||    
T  48445477 gtgttgttatgccttg 48445462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 78 - 236
Target Start/End: Original strand, 3891996 - 3892154
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatacc 177  Q
    ||||||||||||| ||| || |||||||||| | | ||||||||| ||||  ||| |||| ||||| |||||||| |||||||||||||| |   |||||    
T  3891996 gacaaactggaggcaagggacaggacaaaaactcatatttttgtctctcaccaaatcacagcacaactttttgtcctacgtacaagttgtctagaatacc 3892095  T
Q  178 aaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    ||||||   |||||| | |||||||||||  || || |||| ||| ||||| |||||||    
T  3892096 aaaatagcattttgttcctcaaaaatcgtgtaaaacaaaaaattactcaatgccataaa 3892154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 167
Target Start/End: Complemental strand, 1363761 - 1363672
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgt 167  Q
    ||||||||||||| ||| || | |||||||  ||| ||||||||||||||| |||||||| ||||| ||||||||| ||||||| |||||    
T  1363761 gacaaactggaggcaagggacatgacaaaagctgatatttttgtccctcatcaaaccacatcacaactttttgtctcacgtacaggttgt 1363672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 167
Target Start/End: Complemental strand, 16963295 - 16963174
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | | |||||||| |||| ||| || |||||||||| | | |||||||||||| || ||||||||| |||| |    
T  16963295 gtgtttgatttgtaaaactgtttcaggtacatgacaaactagaggcaagggataggacaaaaactcatatttttgtcccttatcaaaccacaatacaact 16963196  T
Q  146 ttttgtcttacgtacaagttgt 167  Q
    |||||||  |||||||||||||    
T  16963195 ttttgtcccacgtacaagttgt 16963174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 167
Target Start/End: Original strand, 23349261 - 23349350
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgt 167  Q
    ||||||||||||| ||| || || ||||||| ||| ||||||||||||||  |||||||||||||| ||||||||  || ||||||||||    
T  23349261 gacaaactggaggcaagggacagaacaaaaactgatatttttgtccctcaccaaaccacaacacaactttttgtcccacatacaagttgt 23349350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 26910348 - 26910469
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggataga-caaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| | |||| ||||| ||  ||||||||||| ||| || |||| ||||| || ||||||||||||||   |||||||||||||| |    
T  26910348 gtgtttgatttgtaaaacagtttcagggacagggcaaactggaggcaagggacaggataaaaactgcaatttttgtccctcgccaaaccacaacacaact 26910447  T
Q  146 ttttgtcttacgtacaagttgt 167  Q
    |||||||  |||||||||||||    
T  26910448 ttttgtcacacgtacaagttgt 26910469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 183
Target Start/End: Original strand, 30598978 - 30599083
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatacc 177  Q
    ||||||||||||| ||| || |||||||||  | | ||||||||||||||| |||||||||||||| ||||||||| | |||||| || | | | |||||    
T  30598978 gacaaactggaggcaagggacaggacaaaagctcatatttttgtccctcatcaaaccacaacacaactttttgtctcaagtacaaattatctaaaatacc 30599077  T
Q  178 aaaata 183  Q
    ||||||    
T  30599078 aaaata 30599083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 104 - 228
Target Start/End: Complemental strand, 26652965 - 26652841
Alignment:
Q  104 aaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaat 203  Q
    ||||| ||| ||||||||||||||  |||||||| ||||| ||||||||  ||||||||||||| | | ||| |||||||   ||||||||  |||||||    
T  26652965 aaaaactgatatttttgtccctcagcaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtccgccaaaaat 26652866  T
Q  204 cgtacaagaccaaaagttattcaat 228  Q
    |||| || || |||| |||||||||    
T  26652865 cgtataaaacaaaaaattattcaat 26652841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 101 - 228
Target Start/End: Original strand, 34295397 - 34295524
Alignment:
Q  101 gacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaa 200  Q
    |||||||| ||| ||||||||||||||  |||||||| ||||| ||||||||  ||||||||||||| | | ||| |||||||   ||||||||  ||||    
T  34295397 gacaaaaactgatatttttgtccctcagcaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtcccccaaa 34295496  T
Q  201 aatcgtacaagaccaaaagttattcaat 228  Q
    |||| || || || |||| |||||||||    
T  34295497 aatcatataaaacaaaaaattattcaat 34295524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 78 - 152
Target Start/End: Complemental strand, 11250742 - 11250668
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtc 152  Q
    ||||||||||||| ||| || |||||||||| | | ||||||||||||||  |||||||||||||| ||||||||    
T  11250742 gacaaactggaggcaagggacaggacaaaaaatcatatttttgtccctcaccaaaccacaacacaactttttgtc 11250668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 136 - 229
Target Start/End: Original strand, 21408328 - 21408421
Alignment:
Q  136 caacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaata 229  Q
    ||||||||||||||||| |||||| ||||||| | | |||| |||| |  |||||||||||||||||| ||| ||||| || | ||||||||||    
T  21408328 caacacaattttttgtcctacgtataagttgtttaaaatacgaaaagaaccttttgtccatcaaaaattgtataagacaaagaattattcaata 21408421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 78 - 167
Target Start/End: Complemental strand, 34519633 - 34519544
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgt 167  Q
    ||||| ||||||| ||| || |||||||||| || ||||||||||||||   |||||||||||||| ||||||||  | |||||||||||    
T  34519633 gacaagctggaggcaagggacaggacaaaaactgcaatttttgtccctcgccaaaccacaacacaactttttgtcccaggtacaagttgt 34519544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 78 - 182
Target Start/End: Complemental strand, 20127414 - 20127310
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatacc 177  Q
    ||||||||||||| ||| || |||||||||  ||| |||||||| |||||  |||||||| ||||| ||||||||  |||||||| |||| | | |||||    
T  20127414 gacaaactggaggcaagggacaggacaaaagctgatatttttgttcctcagcaaaccacatcacaactttttgtcccacgtacaatttgtgtaaaatacc 20127315  T
Q  178 aaaat 182  Q
    |||||    
T  20127314 aaaat 20127310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 114 - 254
Target Start/End: Complemental strand, 34117541 - 34117401
Alignment:
Q  114 atttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagac 213  Q
    ||||||||||||||  |||||||| |||||||||||||   | ||||||||||| | | || ||||||||   ||| ||||  ||||||||||| || ||    
T  34117541 atttttgtccctcaccaaaccacatcacaattttttgttccatgtacaagttgtctaaaatgccaaaatagcatttcgtcccccaaaaatcgtataaaac 34117442  T
Q  214 caaaagttattcaataccataaatgtttggcctgtgttgtt 254  Q
     |||| ||||||||| |||||||  |||| | |||||||||    
T  34117441 gaaaaattattcaatgccataaaaatttgtcttgtgttgtt 34117401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 99 - 167
Target Start/End: Original strand, 41665566 - 41665634
Alignment:
Q  99 aggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgt 167  Q
    |||||||||| || ||||||||||||||   |||||||| ||||| ||||||||| |||||||||||||    
T  41665566 aggacaaaaactgcaatttttgtccctcgccaaaccacatcacaactttttgtctcacgtacaagttgt 41665634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 81 - 236
Target Start/End: Complemental strand, 9913646 - 9913492
Alignment:
Q  81 aaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaa 180  Q
    ||||| |||| ||| || |||||||||||||| ||||| ||| ||||  |||||||| ||||| ||||| ||  ||||||| ||||| | | ||||||||    
T  9913646 aaactagaggcaagggacaggacaaaaattgatatttt-gtcgctcaccaaaccacatcacaactttttttcccacgtacaggttgtctaaaataccaaa 9913548  T
Q  181 atattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    |||   ||| ||||  ||||||||||| || || |||| ||||||||| |||||||    
T  9913547 ataacatttcgtcccccaaaaatcgtataaaactaaaaattattcaattccataaa 9913492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 81 - 236
Target Start/End: Complemental strand, 9927334 - 9927180
Alignment:
Q  81 aaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaa 180  Q
    ||||| |||| ||| || |||||||||||||| ||||| ||| ||||  |||||||| ||||| ||||| ||  ||||||| ||||| | | ||||||||    
T  9927334 aaactagaggcaagggacaggacaaaaattgatatttt-gtcgctcaccaaaccacatcacaactttttttcccacgtacaggttgtctaaaataccaaa 9927236  T
Q  181 atattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    |||   ||| ||||  ||||||||||| || || |||| ||||||||| |||||||    
T  9927235 ataacatttcgtcccccaaaaatcgtataaaactaaaaattattcaattccataaa 9927180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 236
Target Start/End: Original strand, 22724002 - 22724160
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatacc 177  Q
    |||||||| |||||||| || |||||||||| || ||| ||||||| ||   |||||||||| ||| ||||| ||  ||||||||||||||| | ||||     
T  22724002 gacaaactcgaggtaagggacaggacaaaaactgcaatgtttgtccatcgccaaaccacaacgcaactttttatcccacgtacaagttgtataaaataca 22724101  T
Q  178 aaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    ||||||   ||| |||   |||||||| || || ||  ||| |||||||||||||||||    
T  22724102 aaaatagcatttcgtcacccaaaaatcatataatacagaaaattattcaataccataaa 22724160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 145 - 227
Target Start/End: Original strand, 29992732 - 29992813
Alignment:
Q  145 tttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaa 227  Q
    ||||||||| ||||||||||| | | | |||| |||||| | ||||||||| ||||||||||| |||||||||| ||||||||    
T  29992732 tttttgtctcacgtacaagttatctaaaatac-aaaataattttttgtccaccaaaaatcgtataagaccaaaaattattcaa 29992813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 78 - 183
Target Start/End: Complemental strand, 21133497 - 21133392
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatacc 177  Q
    ||||||||| ||| ||| || | |||||||| ||| ||| || ||||||| ||||||||| ||||| ||||||||| || ||||| |||| | | |||||    
T  21133497 gacaaactgaaggcaagggacaagacaaaaactgatattattttccctcaataaaccacatcacaactttttgtctcacatacaaattgtctaaaatacc 21133398  T
Q  178 aaaata 183  Q
    ||||||    
T  21133397 aaaata 21133392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 102 - 254
Target Start/End: Original strand, 29455843 - 29455992
Alignment:
Q  102 acaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaa 201  Q
    ||||||| ||||||| |||||| ||  | ||| ||||||||| ||||||||  || ||| |||| ||  | |||||||||||   ||||||||| |||||    
T  29455843 acaaaaagtgaaattcttgtccttcgcttaacaacaacacaactttttgtcccacatactagttata--aaataccaaaatagcgttttgtccaccaaaa 29455940  T
Q  202 atcgtacaagaccaaaagttattcaataccataaatgtttggcctgtgttgtt 254  Q
     || || |||||||||  ||||||||||||||||| ||||| | |||||||||    
T  29455941 -tcatataagaccaaatattattcaataccataaaagtttgtcatgtgttgtt 29455992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 139 - 236
Target Start/End: Complemental strand, 47947824 - 47947727
Alignment:
Q  139 cacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    ||||| ||||||||  ||||||||||||| | | |||||||||||   |||||||| |||||||||||| || || |||| ||| ||||| |||||||    
T  47947824 cacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaa 47947727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 120 - 212
Target Start/End: Complemental strand, 35645530 - 35645438
Alignment:
Q  120 gtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaaga 212  Q
    |||||||| ||||||||||||||| ||||| || |||||||||||||| | | |||  |||||| || ||| | |||| ||||||||| ||||    
T  35645530 gtccctcactaaaccacaacacaactttttatcgtacgtacaagttgtctaaaataataaaatagtcattttttcatccaaaatcgtataaga 35645438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 178 - 289
Target Start/End: Original strand, 3359911 - 3360022
Alignment:
Q  178 aaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaatgtttggcctgtgttgttatgacttgctttgtgctattatg 277  Q
    |||||| | ||||||| | ||||||| ||| ||||| |||| |||||||||| |||||| ||||  | |||| | || || ||||| || |||| |||||    
T  3359911 aaaatagttttttgtcgaccaaaaatagtataagacaaaaaattattcaatatcataaaagtttatcatgtgctattgtgtcttgcattctgctgttatg 3360010  T
Q  278 tcttgtgttgtt 289  Q
    ||||||||||||    
T  3360011 tcttgtgttgtt 3360022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 167
Target Start/End: Original strand, 22724471 - 22724590
Alignment:
Q  50 gtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatttt 147  Q
    |||||||||||||| | |||| ||||| || |||||||||||| ||| || | |||||||  || |||||||||||||||  |||||||| | ||| |||    
T  22724471 gtttgatttgtaaaacagtttcagggacaggacaaactggaggcaagggatatgacaaaagctgcaatttttgtccctcaccaaaccacagcgcaacttt 22724570  T
Q  148 ttgtcttacgtacaagttgt 167  Q
     ||||  |||||||||||||    
T  22724571 atgtcccacgtacaagttgt 22724590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 78 - 152
Target Start/End: Complemental strand, 11822348 - 11822274
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtc 152  Q
    ||||||||||| | ||| || | |||||||| | | |||||||||| ||| ||||||||||||||| ||||||||    
T  11822348 gacaaactggatgcaagggacatgacaaaaactcatatttttgtccttcactaaaccacaacacaactttttgtc 11822274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 101 - 207
Target Start/End: Complemental strand, 22631840 - 22631734
Alignment:
Q  101 gacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaa 200  Q
    ||||| || ||| |||||||||| |||  ||||||||||| || |||||||  |||||||||||||| | | ||||||||||  | ||| ||||  ||||    
T  22631840 gacaataactgatatttttgtccttcaccaaaccacaacataactttttgttatacgtacaagttgtctaaaataccaaaatgatatttcgtcccccaaa 22631741  T
Q  201 aatcgta 207  Q
    |||||||    
T  22631740 aatcgta 22631734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 114 - 160
Target Start/End: Complemental strand, 46627259 - 46627213
Alignment:
Q  114 atttttgtccctcattaaaccacaacacaattttttgtcttacgtac 160  Q
    |||||| |||||||| |||||||| ||||||||||||||| ||||||    
T  46627259 atttttatccctcatcaaaccacagcacaattttttgtctcacgtac 46627213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 162
Target Start/End: Complemental strand, 17237178 - 17237117
Alignment:
Q  101 gacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaa 162  Q
    |||||||| | | |||||||||  ||| ||||||||||||||| ||||||||| ||||||||    
T  17237178 gacaaaaactcatatttttgtcattcactaaaccacaacacaactttttgtctcacgtacaa 17237117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 229
Target Start/End: Complemental strand, 38360138 - 38360045
Alignment:
Q  136 caacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaata 229  Q
    ||||| |||||||||||| || |||||||||| | | |||| |||||| | ||||||||| |||||||  || |  ||||||| ||||||||||    
T  38360138 caacataattttttgtctcacctacaagttgtttaaaatacaaaaataatattttgtccaacaaaaattatatagaaccaaaaattattcaata 38360045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 117 - 229
Target Start/End: Original strand, 21408635 - 21408746
Alignment:
Q  117 tttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaa 216  Q
    |||||||||||||||||||||||| || ||||| | | | ||||||||| | | | |||| |||||| | ||| |||||  |||||||||| ||||  ||    
T  21408635 tttgtccctcattaaaccacaacataactttttatttcatgtacaagttatctaaaatacaaaaatagt-tttcgtccactaaaaatcgtataagataaa 21408733  T
Q  217 aagttattcaata 229  Q
    || ||||||||||    
T  21408734 aaattattcaata 21408746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 65; Significance: 3e-28; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 39 - 257
Target Start/End: Complemental strand, 20069 - 19849
Alignment:
Q  39 agttatgctgtgtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccac 136  Q
    |||||| | ||||||||| |||||| ||||||||| |||| |||||| || ||  ||| || | |||||||| ||||||| ||||| |||| ||||||||    
T  20069 agttatacagtgtttgatatgtaaaactgttttagagataagacaaattgtagaaaagggatatgacaaaaactgaaattcttgtcactcactaaaccac 19970  T
Q  137 aacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
       |||| ||||||| | ||||||||||||| ||| ||||||||||| |||||||| |||||||||||| | ||  |||||  |||||||||||||||||    
T  19969 tgtacaactttttgtttcacgtacaagttgtttgaaataccaaaatagtcttttgttcatcaaaaatcgcataacgccaaatattattcaataccataaa 19870  T
Q  237 tgtttggcctgtgttgttatg 257  Q
     ||||| | ||||||| ||||    
T  19869 agtttgtcatgtgttgctatg 19849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 31 - 236
Target Start/End: Complemental strand, 23745 - 23540
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | || ||||||| |||| ||| || | |||||||| | | |||||||||| |||     
T  23745 acaactctagttgtccagtgtttgatttgtaaaactgtttcaggtacaggacaaacttgaggcaagggacatgacaaaaactcatatttttgtccttcac 23646  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||| ||||| ||||||||  ||||||||||||| | | |||||||||||     |||||| |||||||||||| || || |||| ||| |||||    
T  23645 caaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaata--acattgtccctcaaaaatcgtataaaacaaaaaattactcaat 23548  T
Q  229 accataaa 236  Q
     |||||||    
T  23547 gccataaa 23540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 59; Significance: 1e-24; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 48 - 228
Target Start/End: Original strand, 17997 - 18179
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | | |||||| |||||| ||| || |||||||||| | | ||||||||||||||  |||||||||||||| |    
T  17997 gtgtttgatttgtaaaactgtttcaggtacatgacaaattggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaact 18096  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
    |||||||  ||||||||||||| | | |||||||||||   |||||||| |||||||||||| || || |||| ||| |||||    
T  18097 ttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 18179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 99 - 228
Target Start/End: Original strand, 12532 - 12661
Alignment:
Q  99 aggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatca 198  Q
    |||||||||| | | ||||||||||||||  |||||||||||||| ||||||||  ||||||||||||| | | |||||||||||   |||||||| |||    
T  12532 aggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctca 12631  T
Q  199 aaaatcgtacaagaccaaaagttattcaat 228  Q
    ||||||||| || || |||| ||| |||||    
T  12632 aaaatcgtataaaacaaaaaattactcaat 12661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 49 - 236
Target Start/End: Original strand, 372908 - 373097
Alignment:
Q  49 tgtttgatttgtaaa-ctgttttagggatagacaaa-ctggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattt 146  Q
    ||||||||||||||| |||||| ||| | ||| ||| ||||||  ||| || | |||||||| | | ||||||||||||||  |||||| ||||||| ||    
T  372908 tgtttgatttgtaaaactgtttcaggtacagaaaaaactggagacaagggatatgacaaaaactcatatttttgtccctcaccaaaccataacacaactt 373007  T
Q  147 tttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    ||||||  ||||||||||||| | | ||||||||||||  |||||||| |||||||||||| || || |||| ||| ||||| |||||||    
T  373008 tttgtcccacgtacaagttgtctaaaataccaaaatatcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaa 373097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 53; Significance: 4e-21; HSPs: 2)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 77 - 229
Target Start/End: Original strand, 13553 - 13705
Alignment:
Q  77 agacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatac 176  Q
    ||||||| |||||| || ||| | ||||||||||||||||| |||| |||| ||||  || |||||| ||||||||  | ||||||||||| |   ||||    
T  13553 agacaaattggaggcaatagacatgacaaaaattgaaatttgtgtctctcactaaaatacgacacaactttttgtcacatgtacaagttgtctagaatac 13652  T
Q  177 caaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaata 229  Q
    ||||||| | ||||||||||||||||||||| |||||||| | ||| ||||||    
T  13653 caaaatagtattttgtccatcaaaaatcgtataagaccaataattaatcaata 13705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 101 - 183
Target Start/End: Original strand, 15379 - 15461
Alignment:
Q  101 gacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaata 183  Q
    |||||||| | | ||||||||||||||  |||||||||||||| ||||||||  | ||||||||||| | | |||||||||||    
T  15379 gacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccatgtacaagttgtctaaaataccaaaata 15461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 48 - 237
Target Start/End: Complemental strand, 15325 - 15134
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | || |||||||||||| ||| || | |||||||| | | ||||||||||| ||  |||||||||||||| |    
T  15325 gtgtttgatttgtaaaactgtttcaggtacaggacaaactggaggcaagggacaagacaaaaactcatatttttgtcccccaccaaaccacaacacaact 15226  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaat 237  Q
    |||||||| ||||||||||||| | | |||| |||||| | ||||||||  |||||||| || || || | || ||| ||||| ||||||||    
T  15225 ttttgtctcacgtacaagttgtctaaaatactaaaatagtattttgtcccccaaaaatcttataaaacaacaaattactcaatgccataaat 15134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 78 - 236
Target Start/End: Original strand, 19066 - 19223
Alignment:
Q  78 gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatatacc 177  Q
    ||||||||||||| |||||| ||||||||| |  | ||||||||||||||  ||| |||| ||||| ||||||||  ||||||||||||| | | |||||    
T  19066 gacaaactggaggcaagagacaggacaaaactc-atatttttgtccctcaccaaatcacagcacaactttttgtcccacgtacaagttgtctaaaatacc 19164  T
Q  178 aaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaa 236  Q
    ||||||   |||||||| |||||||||||| || || |||| ||| ||||| |||||||    
T  19165 aaaataacattttgtccttcaaaaatcgtataaaacaaaaaattactcaatgccataaa 19223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 48 - 194
Target Start/End: Original strand, 2281 - 2429
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||| | || ||||| |||||| ||| || |||||||||| | | ||||||||||||||  |||||||| ||||| |    
T  2281 gtgtttgatttgtaaaactgtttcaggtacaggacaaattggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaact 2380  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtcc 194  Q
    |||||||  ||||||||||||| | | ||||||||||| | ||||||||    
T  2381 ttttgtcccacgtacaagttgtctaaaataccaaaatagttttttgtcc 2429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 48 - 162
Target Start/End: Original strand, 42893 - 43009
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggataga-caaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| ||||| ||| ||||||||||| ||| || || ||||||| |||||||| |||||||||  |||||||||||||| |    
T  42893 gtgtttgatttgtaaaactgtttcagggacagaacaaactggaggcaagggacagaacaaaaactgaaatttgtgtccctcaccaaaccacaacacaact 42992  T
Q  146 ttttgtcttacgtacaa 162  Q
    |||||||  ||||||||    
T  42993 ttttgtcccacgtacaa 43009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0729 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0729
Description:

Target: scaffold0729; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 31 - 236
Target Start/End: Original strand, 4505 - 4712
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaact-gttttagggatag-acaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| | | |||||| |||| ||||| |||||| ||| || |||||||||| | | ||||||||||||||     
T  4505 acaactctagttgtccagtgtttgatttgtaaaattgatttaggtatagcacaaattggaggcaagggacaggacaaaaactcatatttttgtccctcac 4604  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
     |||||||||||||| ||||||||  ||||| ||||||| | | | | ||||||||  |||||||  | |||||||||| || || |||| ||| |||||    
T  4605 caaaccacaacacaactttttgtcccacgtaaaagttgtctaaaacatcaaaatatcattttgtctctaaaaaatcgtataaaacaaaaaattactcaat 4704  T
Q  229 accataaa 236  Q
     |||||||    
T  4705 gccataaa 4712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 101 - 242
Target Start/End: Original strand, 7456 - 7601
Alignment:
Q  101 gacaaaaattgaaatttttgtccctcattaaaccacaacacaa---ttttttgtcttacgtacaagttgtatgatataccaaaatat-tcttttgtccat 196  Q
    |||||||| ||||||| ||||| |||| |||| ||||||||||   |||||||||| |||||| |||||| | | |||||||||||  | ||||||||||    
T  7456 gacaaaaactgaaattcttgtctctcactaaatcacaacacaagatttttttgtctcacgtacgagttgtctaaaataccaaaatagattttttgtccat 7555  T
Q  197 caaaaatcgtacaagaccaaaagttattcaataccataaatgtttg 242  Q
     ||||||  || |||||||||| ||||||||||| ||||| |||||    
T  7556 taaaaattatataagaccaaaaattattcaatactataaaagtttg 7601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 48 - 167
Target Start/End: Original strand, 13630 - 13751
Alignment:
Q  48 gtgtttgatttgtaaact-gttttagggataga-caaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| | |||| ||||| ||| ||||||||||| ||| || |||||||||| ||||||||||||||||||  ||||||||  |||| |    
T  13630 gtgtttgatttgtaaaattgtttcagggacagaacaaactggaggcaagggataggacaaaaactgaaatttttgtccctcaccaaaccacagtacaact 13729  T
Q  146 ttttgtcttacgtacaagttgt 167  Q
    |||||||  || ||||||||||    
T  13730 ttttgtcccacttacaagttgt 13751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 101 - 236
Target Start/End: Complemental strand, 102047 - 101912
Alignment:
Q  101 gacaaaaattgaaatttttgtccctcattaaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaa 200  Q
    |||||||| | | ||||||||||||||  |||||||| ||||| ||||||||  ||||||||||||| | | |||||||||||   |||||||| | |||    
T  102047 gacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctaaaa 101948  T
Q  201 aatcgtacaagaccaaaagttattcaataccataaa 236  Q
    ||||||| || || |||| ||| ||||| |||||||    
T  101947 aatcgtataaaacaaaaaattactcaatgccataaa 101912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 19069 - 19206
Alignment:
Q  18 aggatatgatatgacaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggatagac-aaactggaggtaagagagaggacaaaaattgaaat 115  Q
    |||||| || || |||| || |||||| | |||||||||||||||| |||||| ||||| |||  |||| ||||| ||  || |||||||||| ||||||    
T  19069 aggataggacataacaattccagttatccagtgtttgatttgtaaaactgtttcagggacagaataaacaggaggcaatggacaggacaaaaactgaaat 19168  T
Q  116 ttttgtccctcattaaaccacaacacaattttttgtct 153  Q
    ||||||||||||| ||| | |||||||| |||||||||    
T  19169 ttttgtccctcatcaaagctcaacacaactttttgtct 19206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0957 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 31 - 207
Target Start/End: Original strand, 2422 - 2599
Alignment:
Q  31 acaagtctagttatgctgtgtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaaatttttgtccctcat 128  Q
    |||| ||||||| | | |||||||||||||||| |||||| ||| | | |||||| |||||| ||| || |||||||||| | | || ||||||||| |     
T  2422 acaactctagttgttcagtgtttgatttgtaaaactgtttcaggtacaagacaaattggaggaaagggacaggacaaaaactcatatctttgtccctaac 2521  T
Q  129 taaaccacaacacaattttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgta 207  Q
     |||||||||||||| | || |||| ||||||||||||| | | |||||||||||   ||||||||  |||||||||||    
T  2522 caaaccacaacacaactatt-gtctcacgtacaagttgtctaaaataccaaaatagcattttgtcccccaaaaatcgta 2599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 48 - 228
Target Start/End: Complemental strand, 51591 - 51410
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggataga-caaactggaggtaagagagaggacaaaaattgaaatttttgtccctcattaaaccacaacacaatt 145  Q
    |||||||||||||||| |||||| |||   ||| ||||||||| | ||| || | |||||||| | | ||||||||||||||  |||||||| ||||| |    
T  51591 gtgtttgatttgtaaaactgtttcaggtgcagaacaaactggatgcaagggacaagacaaaaactcatatttttgtccctcac-aaaccacagcacaact 51493  T
Q  146 ttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaat 228  Q
    |||||||  ||||||||||||| | | ||| |||||||   |||||||| |||||||||||| || || |||| ||| |||||    
T  51492 ttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaat 51410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 48 - 324
Target Start/End: Original strand, 5382 - 5661
Alignment:
Q  48 gtgtttgatttgtaaa-ctgttttagggata-gacaaactggaggtaagagagaggacaaaaattgaa-atttttgtccctcattaaaccacaacacaat 144  Q
    |||||||||||||||| |||||| ||| | | ||||||||||||| ||| || ||||||||||    | ||||||||||||||  |||||||| |||||     
T  5382 gtgtttgatttgtaaaactgtttcaggtacaagacaaactggaggcaagggacaggacaaaaaacacatatttttgtccctcaccaaaccacatcacaac 5481  T
Q  145 tttttgtcttacgtacaagttgtatgatataccaaaatattcttttgtccatcaaaaatcgtacaagaccaaaagttattcaataccataaatgtttggc 244  Q
    ||||||||  || |||||||||  | | |||| ||||||   ||| |  |  ||||||||||| || || |||| |||||||||  ||||||  |||| |    
T  5482 tttttgtcccacatacaagttgcctaaaatacaaaaataacatttcgagccccaaaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgtc 5581  T
Q  245 ctgtgttgttatgacttgctttgtgctattatgtcttgtgttgttatgtccgatacttattgtttagcaaatcaaacgca 324  Q
    ||||| |||| || ||||  ||||| | || ||||||||  ||||||||||  |||||  ||||| ||||| ||||||||    
T  5582 ctgtgctgttctgccttgtgttgtgttgttctgtcttgtactgttatgtccagtacttgctgttttgcaaaccaaacgca 5661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University