View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19379_high_57 (Length: 312)
Name: NF19379_high_57
Description: NF19379
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19379_high_57 |
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Alignment Details
Target: chr8 (Bit Score: 284; Significance: 1e-159; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 1961020 - 1960725
Alignment:
| Q |
1 |
acaaggggaataatatagtcccc-agtagaaagtacagagaagtatgcaatatccaaaaatgggtgcgcagcacatactgaatattaagacaaattagag |
99 |
Q |
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| T |
1961020 |
acaaggggaataatatagtcccccagtagaaagtacagagaagtatgcaatatccaaaaatgggtgcgcagcacatactgaagattaagacaaattagag |
1960921 |
T |
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| Q |
100 |
taaactgagaaataaaatgtcaaataaacatgctacaagatgttcttaatagtgcacactatcatgatgatctcattccatattagaaaatcacatatag |
199 |
Q |
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| T |
1960920 |
taaactgagaaataaaatgtcaaataaacatgctacaagatgttcttaatagtgcacactatcatgatgatctcattccatattagaaaatcacatatag |
1960821 |
T |
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| Q |
200 |
taagcacactcttggtgccaagaattctaatatacatctagtcctttttggttataacttttctactgtatcgatactattgcttttaatggagct |
295 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1960820 |
taagcacactcttggtgccaagaattctaatatacatctagtcctttttggttataacttttctactgtatcgatactattgcttttaatggagct |
1960725 |
T |
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