View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19379_high_58 (Length: 311)
Name: NF19379_high_58
Description: NF19379
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19379_high_58 |
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Alignment Details
Target: chr7 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 10 - 295
Target Start/End: Original strand, 39853025 - 39853310
Alignment:
| Q |
10 |
ataattcttactagcnnnnnnnttaagcgaacaattttcccaattccatatttctaagaaaatacaaatgaaagtatattttcatacggcataatttatt |
109 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39853025 |
ataattcttactagcaaaaaaattaagcgaacaattttcccaattccatatttctaagaaaatacaaatgaaagtatattttcatacggcataatttatt |
39853124 |
T |
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| Q |
110 |
tagaagtgtatatagatgacacaaaatatagcacaccttagcacctcttttgggaccaattggtgggggcttggtttttggagctgcctcatcttcaaca |
209 |
Q |
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|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
39853125 |
tagaagtgtatatagatgacacaaaatataacacaccttagcacctcttttgggaccaattggtgggggcttggtttttggagctgcctcaccttcaaca |
39853224 |
T |
|
| Q |
210 |
gttggtgttgcagcagcctcctcagatgccctaacaacaagtctagaattggtgttccttgtagtagggtacatcaccatgttcat |
295 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39853225 |
gttggtgttgcagcagcctcctcagatgccctaacaacaagtctagaattggtgttccttgtagtagggtacatcaccatgttcat |
39853310 |
T |
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