View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19379_high_69 (Length: 290)

Name: NF19379_high_69
Description: NF19379
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19379_high_69
NF19379_high_69
[»] chr8 (1 HSPs)
chr8 (10-290)||(37941287-37941567)


Alignment Details
Target: chr8 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 10 - 290
Target Start/End: Original strand, 37941287 - 37941567
Alignment:
Q  10 attatactagcatcagttgctttacaaaatacacttatgaaattaaacaattaattaatccatatgatcacatgaatcattgttgttaatggtgtcatga 109  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37941287 attatactagcatcagttgctttacaaattacacttatgaaattaaacaattaattaatccatatgatcacatgaatcattgttgttaatggtgtcatga 37941386  T
Q  110 tgagttcttcgggcccattcttttgaaccattgttactactcatcaagttaacacgatcatcatgcctcaatattcctaattcctccaagacattaccca 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37941387 tgagttcttcgggcccattcttttgaaccattgttactactcatcaagttaacacgatcatcatgcctcaatattcctaattcctccaagacattaccca 37941486  T
Q  210 ttttgagatgagaatcagtacttggcggaatttccaaagatggtacttgtgtttttgagaccagagcagaagaataaccaa 290  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  37941487 ttttgagatgagaatcagtacttggcggaatttccaaagatggtacttgtgtttttgagacaagagctgaagaataaccaa 37941567  T

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