View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19379_low_38 (Length: 385)

Name: NF19379_low_38
Description: NF19379
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19379_low_38
NF19379_low_38
[»] chr1 (49 HSPs)
chr1 (13-135)||(11660605-11660729)
chr1 (307-370)||(11660717-11660781)
chr1 (222-292)||(8764031-8764101)
chr1 (222-292)||(26325852-26325922)
chr1 (222-292)||(49078154-49078224)
chr1 (222-292)||(17642002-17642072)
chr1 (222-292)||(41663854-41663924)
chr1 (222-292)||(43959819-43959889)
chr1 (222-291)||(4581681-4581750)
chr1 (222-291)||(10422828-10422897)
chr1 (201-280)||(21849215-21849291)
chr1 (226-262)||(17092505-17092541)
chr1 (222-290)||(33004015-33004083)
chr1 (222-281)||(33418124-33418183)
chr1 (222-264)||(35908798-35908840)
chr1 (135-197)||(41743216-41743278)
chr1 (136-197)||(5855466-5855527)
chr1 (222-291)||(5855562-5855631)
chr1 (231-292)||(10507747-10507808)
chr1 (136-197)||(11397991-11398052)
chr1 (135-200)||(12744623-12744688)
chr1 (135-200)||(12755613-12755678)
chr1 (134-199)||(15465907-15465972)
chr1 (222-291)||(16956506-16956575)
chr1 (196-255)||(48798105-48798161)
chr1 (222-291)||(50503360-50503429)
chr1 (201-291)||(9659178-9659265)
chr1 (223-291)||(11397888-11397956)
chr1 (228-292)||(18915913-18915977)
chr1 (222-262)||(33498867-33498907)
chr1 (137-197)||(41663959-41664019)
chr1 (228-280)||(50094950-50095002)
chr1 (201-262)||(10336538-10336596)
chr1 (136-195)||(51437413-51437472)
chr1 (228-262)||(5504077-5504111)
chr1 (222-291)||(12036742-12036812)
chr1 (196-261)||(30927756-30927818)
chr1 (133-199)||(34877931-34877997)
chr1 (222-292)||(37339860-37339930)
chr1 (228-262)||(48761222-48761256)
chr1 (135-197)||(49078057-49078119)
chr1 (232-265)||(13262133-13262166)
chr1 (222-291)||(45361881-45361950)
chr1 (228-260)||(2980961-2980993)
chr1 (135-195)||(8763934-8763994)
chr1 (228-256)||(12150784-12150812)
chr1 (222-262)||(13265978-13266018)
chr1 (132-184)||(17642120-17642172)
chr1 (222-262)||(45726461-45726501)
[»] chr4 (48 HSPs)
chr4 (222-280)||(8064807-8064865)
chr4 (132-291)||(38165971-38166140)
chr4 (222-290)||(42722576-42722644)
chr4 (228-280)||(50485993-50486045)
chr4 (221-280)||(1940786-1940845)
chr4 (134-197)||(14858657-14858720)
chr4 (228-291)||(47078508-47078571)
chr4 (222-279)||(5472858-5472915)
chr4 (222-290)||(29895831-29895899)
chr4 (228-291)||(16450350-16450413)
chr4 (222-289)||(40780861-40780928)
chr4 (136-197)||(1446774-1446835)
chr4 (222-263)||(1446870-1446911)
chr4 (136-197)||(19651547-19651608)
chr4 (136-197)||(27248376-27248437)
chr4 (222-291)||(29588780-29588849)
chr4 (136-197)||(29895735-29895796)
chr4 (136-197)||(41162984-41163045)
chr4 (136-197)||(53599008-53599069)
chr4 (222-290)||(2559351-2559419)
chr4 (200-262)||(3507295-3507354)
chr4 (222-290)||(7246645-7246713)
chr4 (228-292)||(36262764-36262828)
chr4 (228-292)||(38168306-38168370)
chr4 (222-262)||(43458657-43458697)
chr4 (226-262)||(48317302-48317338)
chr4 (222-262)||(49260692-49260732)
chr4 (136-196)||(49260768-49260828)
chr4 (134-197)||(2559253-2559316)
chr4 (226-265)||(41339419-41339458)
chr4 (134-200)||(295631-295697)
chr4 (222-280)||(3159478-3159536)
chr4 (222-280)||(8889066-8889124)
chr4 (222-256)||(14567283-14567317)
chr4 (222-292)||(20128353-20128423)
chr4 (222-292)||(53599104-53599174)
chr4 (136-197)||(4736545-4736606)
chr4 (134-199)||(5472948-5473013)
chr4 (197-280)||(30317255-30317335)
chr4 (136-197)||(34667704-34667765)
chr4 (133-186)||(45789632-45789685)
chr4 (222-262)||(295560-295600)
chr4 (222-262)||(6779255-6779295)
chr4 (222-290)||(14124060-14124128)
chr4 (222-262)||(14597927-14597967)
chr4 (203-261)||(20354665-20354720)
chr4 (222-262)||(36145242-36145282)
chr4 (228-280)||(54946299-54946351)
[»] chr7 (39 HSPs)
chr7 (222-291)||(39474982-39475051)
chr7 (201-291)||(34659250-34659337)
chr7 (222-279)||(16802165-16802222)
chr7 (222-291)||(48804725-48804794)
chr7 (134-197)||(34127722-34127785)
chr7 (228-291)||(36619252-36619315)
chr7 (222-262)||(3353466-3353506)
chr7 (222-262)||(41945515-41945555)
chr7 (222-265)||(24983443-24983486)
chr7 (135-197)||(1605886-1605948)
chr7 (222-292)||(17748379-17748449)
chr7 (222-280)||(37514963-37515021)
chr7 (222-291)||(4195200-4195269)
chr7 (228-289)||(27875088-27875149)
chr7 (136-197)||(48804629-48804690)
chr7 (135-199)||(4228851-4228915)
chr7 (228-280)||(4705993-4706045)
chr7 (228-292)||(5069812-5069876)
chr7 (222-290)||(38578866-38578934)
chr7 (221-256)||(32823284-32823319)
chr7 (138-197)||(34659174-34659233)
chr7 (135-197)||(5039520-5039582)
chr7 (230-292)||(10047873-10047935)
chr7 (228-258)||(30827340-30827370)
chr7 (222-292)||(42210259-42210329)
chr7 (221-291)||(43346777-43346847)
chr7 (222-292)||(43861969-43862039)
chr7 (222-292)||(47341918-47341988)
chr7 (222-292)||(48244353-48244423)
chr7 (136-197)||(4195304-4195365)
chr7 (223-260)||(4973139-4973176)
chr7 (222-291)||(8734684-8734753)
chr7 (134-195)||(11607075-11607136)
chr7 (228-265)||(14535339-14535376)
chr7 (136-197)||(16802069-16802130)
chr7 (222-291)||(21190778-21190847)
chr7 (196-260)||(23658198-23658259)
chr7 (136-197)||(43925458-43925519)
chr7 (220-280)||(28396169-28396229)
[»] chr5 (45 HSPs)
chr5 (131-280)||(3653923-3654080)
chr5 (196-292)||(42086344-42086437)
chr5 (222-292)||(1538471-1538541)
chr5 (222-292)||(19572764-19572834)
chr5 (222-278)||(9168264-9168320)
chr5 (228-291)||(8513565-8513628)
chr5 (222-265)||(20525878-20525921)
chr5 (134-197)||(30349521-30349584)
chr5 (223-262)||(37263281-37263320)
chr5 (222-292)||(4016252-4016322)
chr5 (222-292)||(9805044-9805114)
chr5 (222-280)||(24463895-24463953)
chr5 (222-292)||(38897716-38897786)
chr5 (228-262)||(42291532-42291566)
chr5 (222-292)||(42861215-42861285)
chr5 (223-292)||(5079372-5079440)
chr5 (136-197)||(19572668-19572729)
chr5 (222-291)||(20682615-20682684)
chr5 (222-291)||(43399168-43399237)
chr5 (222-262)||(14588644-14588684)
chr5 (135-195)||(20525781-20525841)
chr5 (228-292)||(23247349-23247412)
chr5 (228-280)||(25452971-25453022)
chr5 (201-279)||(32874809-32874884)
chr5 (134-197)||(5079273-5079336)
chr5 (134-197)||(9812814-9812877)
chr5 (134-197)||(12704956-12705019)
chr5 (222-292)||(5731917-5731987)
chr5 (135-197)||(5732022-5732084)
chr5 (222-256)||(6764490-6764524)
chr5 (131-197)||(6767153-6767219)
chr5 (228-262)||(14974351-14974385)
chr5 (135-197)||(41163561-41163623)
chr5 (136-197)||(18136382-18136443)
chr5 (228-289)||(20223099-20223160)
chr5 (222-291)||(24653810-24653878)
chr5 (222-291)||(40117455-40117524)
chr5 (222-258)||(7336660-7336696)
chr5 (222-262)||(12081948-12081988)
chr5 (222-262)||(20255409-20255449)
chr5 (228-292)||(22655155-22655218)
chr5 (222-262)||(24875385-24875425)
chr5 (228-256)||(30995167-30995195)
chr5 (228-280)||(39099788-39099840)
chr5 (135-199)||(39728330-39728394)
[»] chr2 (53 HSPs)
chr2 (136-200)||(14853466-14853530)
chr2 (222-280)||(6358160-6358218)
chr2 (222-291)||(25540402-25540471)
chr2 (228-279)||(35946783-35946834)
chr2 (222-292)||(10823099-10823169)
chr2 (222-292)||(12455349-12455419)
chr2 (222-292)||(44945632-44945702)
chr2 (228-292)||(7747319-7747383)
chr2 (228-280)||(34738342-34738394)
chr2 (136-195)||(3598856-3598915)
chr2 (228-291)||(16325640-16325703)
chr2 (228-291)||(41031904-41031967)
chr2 (222-280)||(37560212-37560270)
chr2 (222-292)||(41220674-41220744)
chr2 (222-280)||(42770660-42770718)
chr2 (229-291)||(44139530-44139592)
chr2 (136-197)||(2149297-2149358)
chr2 (136-197)||(7747217-7747278)
chr2 (136-197)||(12864167-12864228)
chr2 (222-279)||(28525465-28525522)
chr2 (222-290)||(9360747-9360815)
chr2 (222-290)||(12864263-12864331)
chr2 (222-290)||(14169608-14169676)
chr2 (136-196)||(15079426-15079486)
chr2 (222-262)||(22593173-22593213)
chr2 (228-260)||(25549773-25549805)
chr2 (136-196)||(38005345-38005405)
chr2 (222-261)||(8410170-8410209)
chr2 (133-196)||(20963212-20963275)
chr2 (228-290)||(16813164-16813226)
chr2 (228-290)||(16852443-16852505)
chr2 (139-197)||(21286390-21286448)
chr2 (222-280)||(27725979-27726037)
chr2 (196-252)||(45263704-45263757)
chr2 (136-197)||(331444-331505)
chr2 (222-291)||(3643885-3643954)
chr2 (228-261)||(4120180-4120213)
chr2 (222-279)||(10026626-10026683)
chr2 (222-279)||(10046487-10046544)
chr2 (136-197)||(10046578-10046639)
chr2 (222-291)||(11069917-11069986)
chr2 (223-292)||(20116609-20116678)
chr2 (136-197)||(20612638-20612699)
chr2 (222-291)||(28616377-28616446)
chr2 (233-289)||(1773644-1773700)
chr2 (228-256)||(7787101-7787129)
chr2 (201-291)||(18902528-18902615)
chr2 (222-289)||(20612534-20612602)
chr2 (228-256)||(21180347-21180375)
chr2 (228-260)||(24179613-24179645)
chr2 (222-262)||(38962802-38962842)
chr2 (228-280)||(39201517-39201569)
chr2 (137-197)||(41187793-41187853)
[»] chr8 (24 HSPs)
chr8 (222-292)||(6100515-6100585)
chr8 (222-292)||(10927649-10927719)
chr8 (133-197)||(2467220-2467284)
chr8 (136-196)||(17845680-17845740)
chr8 (222-289)||(15884556-15884623)
chr8 (203-280)||(18374037-18374111)
chr8 (136-197)||(44893380-44893441)
chr8 (228-280)||(13357965-13358017)
chr8 (132-195)||(3418617-3418680)
chr8 (222-289)||(4479296-4479363)
chr8 (132-199)||(18373953-18374020)
chr8 (130-197)||(24837183-24837250)
chr8 (222-292)||(14666068-14666138)
chr8 (136-197)||(8141049-8141110)
chr8 (231-292)||(8803106-8803167)
chr8 (136-197)||(13085471-13085532)
chr8 (136-197)||(14666173-14666234)
chr8 (136-197)||(38922516-38922577)
chr8 (223-260)||(43027349-43027386)
chr8 (222-291)||(43032944-43033013)
chr8 (200-262)||(583836-583895)
chr8 (228-292)||(2964125-2964189)
chr8 (136-196)||(10535506-10535566)
chr8 (226-262)||(26570971-26571007)
[»] chr3 (57 HSPs)
chr3 (222-292)||(49021201-49021271)
chr3 (134-197)||(42412877-42412940)
chr3 (135-197)||(33251604-33251666)
chr3 (222-292)||(47749103-47749173)
chr3 (222-292)||(54237487-54237557)
chr3 (228-292)||(28572209-28572273)
chr3 (222-290)||(54261265-54261333)
chr3 (222-265)||(49198390-49198433)
chr3 (196-289)||(51682955-51683045)
chr3 (222-292)||(3136692-3136762)
chr3 (222-292)||(25294999-25295069)
chr3 (222-292)||(29127958-29128028)
chr3 (228-290)||(30767247-30767309)
chr3 (222-280)||(43330742-43330800)
chr3 (222-292)||(47219183-47219253)
chr3 (222-280)||(50405613-50405671)
chr3 (222-292)||(51060279-51060349)
chr3 (222-291)||(7648779-7648848)
chr3 (136-197)||(13893869-13893930)
chr3 (223-292)||(13893966-13894035)
chr3 (136-197)||(25294903-25294964)
chr3 (136-197)||(26207904-26207965)
chr3 (222-279)||(45402362-45402419)
chr3 (136-197)||(45877397-45877458)
chr3 (132-197)||(54261165-54261230)
chr3 (228-292)||(15320231-15320295)
chr3 (222-290)||(29762155-29762223)
chr3 (135-195)||(29762260-29762320)
chr3 (228-292)||(33251707-33251771)
chr3 (222-289)||(3507534-3507601)
chr3 (134-197)||(15320127-15320190)
chr3 (222-265)||(29135952-29135995)
chr3 (228-279)||(49543564-49543615)
chr3 (136-199)||(51683055-51683118)
chr3 (222-292)||(928639-928709)
chr3 (222-280)||(15795504-15795562)
chr3 (234-292)||(36043672-36043730)
chr3 (228-290)||(45877499-45877561)
chr3 (228-289)||(2029268-2029329)
chr3 (222-291)||(7328883-7328951)
chr3 (231-260)||(19873420-19873449)
chr3 (222-291)||(23511606-23511675)
chr3 (136-197)||(48341963-48342024)
chr3 (136-197)||(49198294-49198355)
chr3 (228-256)||(7310737-7310765)
chr3 (222-262)||(10040595-10040635)
chr3 (143-195)||(10043100-10043152)
chr3 (136-184)||(10855327-10855375)
chr3 (226-290)||(19147004-19147068)
chr3 (228-280)||(26207811-26207863)
chr3 (228-256)||(26362001-26362029)
chr3 (139-199)||(31072824-31072884)
chr3 (228-292)||(35998569-35998633)
chr3 (222-290)||(47471870-47471938)
chr3 (228-280)||(50753351-50753403)
chr3 (196-258)||(52364832-52364891)
chr3 (136-196)||(55069783-55069843)
[»] chr6 (33 HSPs)
chr6 (228-292)||(6606094-6606158)
chr6 (228-292)||(14783417-14783481)
chr6 (222-292)||(9633622-9633692)
chr6 (222-292)||(21898691-21898761)
chr6 (228-292)||(19089547-19089611)
chr6 (136-199)||(13468880-13468943)
chr6 (134-200)||(12606375-12606441)
chr6 (222-292)||(12635857-12635927)
chr6 (222-292)||(30788850-30788920)
chr6 (222-291)||(3601127-3601196)
chr6 (136-197)||(5253325-5253386)
chr6 (222-291)||(13036002-13036071)
chr6 (136-197)||(21898595-21898656)
chr6 (222-262)||(2271330-2271370)
chr6 (136-196)||(8938658-8938718)
chr6 (222-262)||(12606473-12606513)
chr6 (228-292)||(13468982-13469046)
chr6 (228-292)||(14107355-14107419)
chr6 (134-197)||(8612076-8612139)
chr6 (134-197)||(14107460-14107523)
chr6 (135-197)||(2271403-2271465)
chr6 (242-288)||(4596184-4596230)
chr6 (222-280)||(13391329-13391387)
chr6 (222-292)||(29444762-29444832)
chr6 (222-291)||(5253221-5253290)
chr6 (134-195)||(5759573-5759634)
chr6 (228-257)||(19230591-19230620)
chr6 (136-197)||(29333240-29333301)
chr6 (223-260)||(33940055-33940092)
chr6 (222-290)||(9366423-9366490)
chr6 (196-259)||(24671896-24671956)
chr6 (222-274)||(29333154-29333206)
chr6 (231-291)||(34954617-34954677)
[»] scaffold0006 (1 HSPs)
scaffold0006 (221-280)||(68555-68614)
[»] scaffold0010 (1 HSPs)
scaffold0010 (196-292)||(155708-155801)
[»] scaffold0170 (2 HSPs)
scaffold0170 (222-262)||(9887-9927)
scaffold0170 (134-197)||(9789-9852)
[»] scaffold0086 (1 HSPs)
scaffold0086 (196-290)||(26202-26293)
[»] scaffold0011 (2 HSPs)
scaffold0011 (228-280)||(186565-186617)
scaffold0011 (231-290)||(224368-224427)
[»] scaffold0005 (2 HSPs)
scaffold0005 (222-256)||(250058-250092)
scaffold0005 (222-262)||(219411-219451)
[»] scaffold0316 (1 HSPs)
scaffold0316 (222-291)||(1612-1681)
[»] scaffold0291 (1 HSPs)
scaffold0291 (222-291)||(6897-6966)
[»] scaffold0004 (1 HSPs)
scaffold0004 (142-199)||(95079-95136)
[»] scaffold0002 (1 HSPs)
scaffold0002 (136-197)||(412128-412189)
[»] scaffold0384 (1 HSPs)
scaffold0384 (228-280)||(6020-6072)
[»] scaffold0209 (1 HSPs)
scaffold0209 (200-262)||(12596-12655)
[»] scaffold0029 (1 HSPs)
scaffold0029 (228-256)||(41092-41120)
[»] scaffold0009 (1 HSPs)
scaffold0009 (222-290)||(42831-42899)


Alignment Details
Target: chr1 (Bit Score: 102; Significance: 1e-50; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 13 - 135
Target Start/End: Original strand, 11660605 - 11660729
Alignment:
Q  13 aatatgctgtatacttttttctttctgagtatcaaagtttaaattaattaactcaaattaattaccac--atattaatatgttttaaacacattatcata 110  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||    
T  11660605 aatatgctgtatattttttcctttctgagtatcaaagtttaaattaattagctcaaattaattaccacatatattaatatgttttaaacacattatcata 11660704  T
Q  111 gtttctctaaaatcaaattacaata 135  Q
    |||||||||||||||||||||||||    
T  11660705 gtttctctaaaatcaaattacaata 11660729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 307 - 370
Target Start/End: Original strand, 11660717 - 11660781
Alignment:
Q  307 tcaaattacaatattttaaacatatttccttcca-ttttttagaggtttaaacatattttgatgt 370  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  11660717 tcaaattacaatattttaaacatatttccttccatttttttagaggtttaaacatattttgatgt 11660781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 222 - 292
Target Start/End: Original strand, 8764031 - 8764101
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    ||||| ||||||||||||||||||||||||||||||||||| || || ||||| |||||  ||||||||||    
T  8764031 gtgcgcatgcctctacgcacgagccggattagtcgtccaccgttggtgggtcggaaaccggtgcgaaagcc 8764101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 222 - 292
Target Start/End: Original strand, 26325852 - 26325922
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    ||||| ||||||||||||| |||||||||||||||||||||||| || ||||| |||||  ||||||||||    
T  26325852 gtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagcc 26325922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 222 - 292
Target Start/End: Original strand, 49078154 - 49078224
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    ||||| ||||||||||||| |||||||||||||||| ||||||| |||||||| |||||  ||||||||||    
T  49078154 gtgcgcatgcctctacgcatgagccggattagtcgttcaccattggtaggtcggaaaccggtgcgaaagcc 49078224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 222 - 292
Target Start/End: Complemental strand, 17642072 - 17642002
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    ||||| ||||||||||||||||||||||||||||||||||| || || ||||| ||||   ||||||||||    
T  17642072 gtgcgcatgcctctacgcacgagccggattagtcgtccacctttggtgggtcggaaactggtgcgaaagcc 17642002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 222 - 292
Target Start/End: Complemental strand, 41663924 - 41663854
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    ||||| ||||||||||||| |||| ||||||||||||||||||| || ||||| |||||  ||||||||||    
T  41663924 gtgcgcatgcctctacgcatgagctggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagcc 41663854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 222 - 292
Target Start/End: Complemental strand, 43959889 - 43959819
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    ||||| ||||||||||||||||||||||||||||| ||||| ||||| | ||| |||||  ||||||||||    
T  43959889 gtgcgcatgcctctacgcacgagccggattagtcgcccacctttagtggatcggaaaccggtgcgaaagcc 43959819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 291
Target Start/End: Complemental strand, 4581750 - 4581681
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagc 291  Q
    ||||| |||||||||||||||||||||| |||||||||||| || || ||||| |||||  |||||||||    
T  4581750 gtgcgcatgcctctacgcacgagccggaatagtcgtccacctttggtgggtcggaaaccggtgcgaaagc 4581681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 291
Target Start/End: Original strand, 10422828 - 10422897
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagc 291  Q
    ||||| ||||||||||||| ||||||||||||||||||||| || ||| |||| |||||  |||||||||    
T  10422828 gtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtaagtcggaaaccggtgcgaaagc 10422897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 280
Target Start/End: Complemental strand, 21849291 - 21849215
Alignment:
Q  201 gggaacaacgcttgactagtggtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaacc 280  Q
    |||||||||||||| ||||||   || |||||||||||||||||||||||||||||  ||| ||| || |||||||||||    
T  21849291 gggaacaacgcttggctagtg---cgcatgcctctacgcacgagccggattagtcgctcactattggtgggtcgaaaacc 21849215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 226 - 262
Target Start/End: Complemental strand, 17092541 - 17092505
Alignment:
Q  226 gtatgcctctacgcacgagccggattagtcgtccacc 262  Q
    |||||||||||||||||||||||||||||||||||||    
T  17092541 gtatgcctctacgcacgagccggattagtcgtccacc 17092505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 222 - 290
Target Start/End: Complemental strand, 33004083 - 33004015
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaag 290  Q
    ||||| ||||||||||||||||||||||||||||  |||||| | || |||||||||||  ||||||||    
T  33004083 gtgcgcatgcctctacgcacgagccggattagtcacccaccaatggtgggtcgaaaaccggtgcgaaag 33004015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 222 - 281
Target Start/End: Complemental strand, 33418183 - 33418124
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaacca 281  Q
    ||||| ||||||||| ||||||||||||||||||||||||| || || ||||| ||||||    
T  33418183 gtgcgcatgcctctatgcacgagccggattagtcgtccacctttggtcggtcggaaacca 33418124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 264
Target Start/End: Original strand, 35908798 - 35908840
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccat 264  Q
    ||||| ||||||||||||| |||||||||||||||||||||||    
T  35908798 gtgcgcatgcctctacgcatgagccggattagtcgtccaccat 35908840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 41743216 - 41743278
Alignment:
Q  135 aaaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    ||||||||||| |||||||||| || ||| || ||||||||||||| ||||||| ||||||||    
T  41743216 aaaccaagttgcttgggctccggtggcaaggagctccttccaaggacgtatccgaggaatacc 41743278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 197
Target Start/End: Original strand, 5855466 - 5855527
Alignment:
Q  136 aaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    ||||||||||||||||||||  || ||| || ||||||||||||| |||| |||||||||||    
T  5855466 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtattcggggaatacc 5855527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 291
Target Start/End: Original strand, 5855562 - 5855631
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagc 291  Q
    ||||| ||||||||||||| ||| |||||||||||| |||| ||||| ||||| |||||  |||||||||    
T  5855562 gtgcgcatgcctctacgcatgaggcggattagtcgttcacctttagtgggtcggaaaccgatgcgaaagc 5855631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 10507747 - 10507808
Alignment:
Q  231 cctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    |||||||||| |||||||||||||||||||||| | || ||||| |||||| | ||||||||    
T  10507747 cctctacgcatgagccggattagtcgtccaccactggtgggtcggaaaccaattcgaaagcc 10507808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 197
Target Start/End: Complemental strand, 11398052 - 11397991
Alignment:
Q  136 aaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    |||||||||| |||||||||  || ||| || |||||||||||||||||||||| |||||||    
T  11398052 aaccaagttgcttgggctccagtggcaaggagctccttccaaggatgtatccggagaatacc 11397991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 135 - 200
Target Start/End: Complemental strand, 12744688 - 12744623
Alignment:
Q  135 aaaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaataccaga 200  Q
    |||||||||||||||| ||||  ||||| ||||||||||||||||| ||||| | |||||| ||||    
T  12744688 aaaccaagttgtttggactccagtgacattgaactccttccaaggacgtatctgaggaatatcaga 12744623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 135 - 200
Target Start/End: Complemental strand, 12755678 - 12755613
Alignment:
Q  135 aaaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaataccaga 200  Q
    |||||||||||||||| ||||  ||||| ||||||||||||||||| ||||| | |||||| ||||    
T  12755678 aaaccaagttgtttggactccagtgacattgaactccttccaaggacgtatctgaggaatatcaga 12755613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 134 - 199
Target Start/End: Original strand, 15465907 - 15465972
Alignment:
Q  134 taaaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaataccag 199  Q
    ||||||||||||||||||||||  |||||| |  ||||||||||||| ||||  ||||||||||||    
T  15465907 taaaccaagttgtttgggctccagtgacaaagggctccttccaaggacgtatttggggaataccag 15465972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 291
Target Start/End: Original strand, 16956506 - 16956575
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagc 291  Q
    ||||| ||||||||||||||||||||||||||||   |||| || || ||||| |||||| |||||||||    
T  16956506 gtgcgcatgcctctacgcacgagccggattagtcactcacctttggtgggtcggaaaccagtgcgaaagc 16956575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 196 - 255
Target Start/End: Complemental strand, 48798161 - 48798105
Alignment:
Q  196 ccagagggaacaacgcttgactagtggtgcgtatgcctctacgcacgagccggattagtc 255  Q
    |||| |||||||||||||||||||||   || ||||||||||||| ||||||||||||||    
T  48798161 ccagggggaacaacgcttgactagtg---cgcatgcctctacgcatgagccggattagtc 48798105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 291
Target Start/End: Complemental strand, 50503429 - 50503360
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagc 291  Q
    ||||| |||||||||||||||||||||||| |||| |||||| | || ||||| |||||  |||||||||    
T  50503429 gtgcgcatgcctctacgcacgagccggatttgtcgcccaccaatggtgggtcggaaaccgatgcgaaagc 50503360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 291
Target Start/End: Complemental strand, 9659265 - 9659178
Alignment:
Q  201 gggaacaacgcttgactagtggtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagc 291  Q
    |||||||||| ||||||||||   || |||||| |||||| ||||||||||||||||||||| || || ||| | |||||  |||||||||    
T  9659265 gggaacaacgtttgactagtg---cgcatgcctttacgcatgagccggattagtcgtccacctttggtgggttggaaaccggtgcgaaagc 9659178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 291
Target Start/End: Complemental strand, 11397956 - 11397888
Alignment:
Q  223 tgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagc 291  Q
    |||||||||||||||||| ||| ||||||||||||||||| || || ||||| ||| |  |||||||||    
T  11397956 tgcgtatgcctctacgcatgagtcggattagtcgtccacctttggtgggtcggaaatcggtgcgaaagc 11397888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 292
Target Start/End: Original strand, 18915913 - 18915977
Alignment:
Q  228 atgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    |||||||||||||||||||||||||||||  ||||||| || ||| | |||||  ||||||||||    
T  18915913 atgcctctacgcacgagccggattagtcgctcaccattggtgggttggaaaccggtgcgaaagcc 18915977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 33498907 - 33498867
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccacc 262  Q
    ||||| ||||||||||||| |||||||||||||||||||||    
T  33498907 gtgcgcatgcctctacgcatgagccggattagtcgtccacc 33498867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 197
Target Start/End: Complemental strand, 41664019 - 41663959
Alignment:
Q  137 accaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    |||||||||||||||||||  || ||| || ||||||| ||||| ||||||||||||||||    
T  41664019 accaagttgtttgggctccagtggcaaggagctccttctaaggacgtatccggggaatacc 41663959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 50094950 - 50095002
Alignment:
Q  228 atgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaacc 280  Q
    |||| |||||||| ||| ||||||||||||||||||||||| ||||| |||||    
T  50094950 atgcttctacgcatgagtcggattagtcgtccaccattagtgggtcggaaacc 50095002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 201 - 262
Target Start/End: Original strand, 10336538 - 10336596
Alignment:
Q  201 gggaacaacgcttgactagtggtgcgtatgcctctacgcacgagccggattagtcgtccacc 262  Q
    |||||||||||||||| ||||   || ||||||||||||| ||||||||||| |||||||||    
T  10336538 gggaacaacgcttgaccagtg---cgcatgcctctacgcatgagccggattaatcgtccacc 10336596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 136 - 195
Target Start/End: Original strand, 51437413 - 51437472
Alignment:
Q  136 aaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaata 195  Q
    |||||||||||||||||| |  ||||||||| |||||| |||||| ||||||| ||||||    
T  51437413 aaccaagttgtttgggcttcagtgacaatgagctcctttcaaggacgtatccgaggaata 51437472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 262
Target Start/End: Original strand, 5504077 - 5504111
Alignment:
Q  228 atgcctctacgcacgagccggattagtcgtccacc 262  Q
    ||||||||||||| |||||||||||||||||||||    
T  5504077 atgcctctacgcatgagccggattagtcgtccacc 5504111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 291
Target Start/End: Complemental strand, 12036812 - 12036742
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtc-gaaaaccactgcgaaagc 291  Q
    ||||| ||||||||||||||||||| ||||| ||||||||| || || | || |||||||| |||||||||    
T  12036812 gtgcgcatgcctctacgcacgagccagattaatcgtccacctttggtggatcggaaaaccagtgcgaaagc 12036742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 30927818 - 30927756
Alignment:
Q  196 ccagagggaacaacgcttgactagtggtgcgtatgcctctacgcacgagccggattagtcgtccac 261  Q
    ||||||||||||||||||| | | || |||  ||||||||||||| ||||||||||||||||||||    
T  30927818 ccagagggaacaacgcttggccaatg-tgc--atgcctctacgcatgagccggattagtcgtccac 30927756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 199
Target Start/End: Original strand, 34877931 - 34877997
Alignment:
Q  133 ataaaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaataccag 199  Q
    ||||||||||||||||||||| |  || ||| || | ||||||||||| |||| |||||||||||||    
T  34877931 ataaaccaagttgtttgggcttcagtggcaaggagcaccttccaaggacgtattcggggaataccag 34877997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 292
Target Start/End: Original strand, 37339860 - 37339930
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    ||||| ||||||| ||||||||||||||||||||| ||||| || || ||| | |||||  ||||||||||    
T  37339860 gtgcgcatgcctcaacgcacgagccggattagtcgcccacctttggtgggttggaaaccggtgcgaaagcc 37339930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 262
Target Start/End: Original strand, 48761222 - 48761256
Alignment:
Q  228 atgcctctacgcacgagccggattagtcgtccacc 262  Q
    |||||||||||||||||| ||||||||||||||||    
T  48761222 atgcctctacgcacgagctggattagtcgtccacc 48761256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 49078057 - 49078119
Alignment:
Q  135 aaaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    ||||||||||| |||||||||  || ||| || ||||||| ||||| ||||||||||||||||    
T  49078057 aaaccaagttgcttgggctccagtggcaaggagctccttctaaggacgtatccggggaatacc 49078119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 265
Target Start/End: Original strand, 13262133 - 13262166
Alignment:
Q  232 ctctacgcacgagccggattagtcgtccaccatt 265  Q
    ||||||||||||| ||||||||||||||||||||    
T  13262133 ctctacgcacgagtcggattagtcgtccaccatt 13262166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 291
Target Start/End: Complemental strand, 45361950 - 45361881
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagc 291  Q
    ||||| ||||| |||||||  ||||||||||||||| |||| ||||| ||||| |||||  |||||||||    
T  45361950 gtgcgcatgccactacgcataagccggattagtcgttcacctttagtgggtcggaaaccggtgcgaaagc 45361881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 260
Target Start/End: Complemental strand, 2980993 - 2980961
Alignment:
Q  228 atgcctctacgcacgagccggattagtcgtcca 260  Q
    ||||||||||||||||| |||||||||||||||    
T  2980993 atgcctctacgcacgagtcggattagtcgtcca 2980961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 195
Target Start/End: Original strand, 8763934 - 8763994
Alignment:
Q  135 aaaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaata 195  Q
    ||||||||||| |||||||||  || ||| || ||||||||||||| ||| ||||||||||    
T  8763934 aaaccaagttgcttgggctcccgtggcaaggagctccttccaaggacgtacccggggaata 8763994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 256
Target Start/End: Original strand, 12150784 - 12150812
Alignment:
Q  228 atgcctctacgcacgagccggattagtcg 256  Q
    |||||||||||||||||||||||||||||    
T  12150784 atgcctctacgcacgagccggattagtcg 12150812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 13265978 - 13266018
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccacc 262  Q
    ||||| ||||||||||||| ||||||| |||||||||||||    
T  13265978 gtgcgcatgcctctacgcatgagccgggttagtcgtccacc 13266018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 17642172 - 17642120
Alignment:
Q  132 aataaaccaagttgtttgggctccgatgacaatgaactccttccaaggatgta 184  Q
    ||||||||||||||||||||||||  |||||| || ||||||||| ||| |||    
T  17642172 aataaaccaagttgtttgggctccagtgacaaggagctccttccacggacgta 17642120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 45726501 - 45726461
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccacc 262  Q
    ||||||||| ||||||||| |||||||||||||||| ||||    
T  45726501 gtgcgtatgtctctacgcatgagccggattagtcgttcacc 45726461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 1e-17; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 222 - 280
Target Start/End: Complemental strand, 8064865 - 8064807
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaacc 280  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  8064865 gtgcgcatgcctctacgcatgagccggattagtcgtccaccattaataggtcgaaaacc 8064807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 291
Target Start/End: Original strand, 38165971 - 38166140
Alignment:
Q  132 aataaaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaata-------------ccagagggaacaacgcttgacta 218  Q
    ||||||||||||||||||||||||  || ||| || ||||||||||||| ||||||||||||||             |||| |||||||||||||| | |    
T  38165971 aataaaccaagttgtttgggctccactggcaaggagctccttccaaggacgtatccggggaatactgggttggattcccagggggaacaacgcttggcca 38166070  T
Q  219 gtggtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagc 291  Q
       ||||| ||| ||||||||||||||||||||||||| ||||| || || ||||| |||||  |||||||||    
T  38166071 ---gtgcgcatggctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaagc 38166140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 222 - 290
Target Start/End: Complemental strand, 42722644 - 42722576
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaag 290  Q
    ||||| ||||||||||||| |||||||||||||||| |||| ||||| |||||||||||  ||||||||    
T  42722644 gtgcgcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcgaaaaccggtgcgaaag 42722576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 50485993 - 50486045
Alignment:
Q  228 atgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaacc 280  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||| |||||    
T  50485993 atgcctctacgcacgagccggattagtcgcccaccattagtgggtcggaaacc 50486045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 221 - 280
Target Start/End: Complemental strand, 1940845 - 1940786
Alignment:
Q  221 ggtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaacc 280  Q
    |||||| ||||||||||||||||||||||||||||| ||||| || || |||||||||||    
T  1940845 ggtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcgaaaacc 1940786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 134 - 197
Target Start/End: Original strand, 14858657 - 14858720
Alignment:
Q  134 taaaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    |||| ||||||||||| |||||  ||||||||||||||||||||||||||| |||| |||||||    
T  14858657 taaatcaagttgtttgagctccattgacaatgaactccttccaaggatgtacccggagaatacc 14858720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 228 - 291
Target Start/End: Original strand, 47078508 - 47078571
Alignment:
Q  228 atgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagc 291  Q
    |||||||||||||||||||||||||||||  ||||||| || ||||| |||||| |||||||||    
T  47078508 atgcctctacgcacgagccggattagtcgctcaccattggtgggtcggaaaccagtgcgaaagc 47078571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 279
Target Start/End: Complemental strand, 5472915 - 5472858
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaac 279  Q
    ||||| ||||||||||||||||||||||||||||| ||||| || || ||||||||||    
T  5472915 gtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcgaaaac 5472858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 222 - 290
Target Start/End: Original strand, 29895831 - 29895899
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaag 290  Q
    ||||| ||||||||||||| |||||||||||||||||||||||| || | ||| |||||  ||||||||    
T  29895831 gtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtggttcggaaaccggtgcgaaag 29895899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 228 - 291
Target Start/End: Original strand, 16450350 - 16450413
Alignment:
Q  228 atgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagc 291  Q
    ||||||||||||| ||||| ||||||||||||||| || |||||||| |||||  |||||||||    
T  16450350 atgcctctacgcatgagccagattagtcgtccacctttggtaggtcggaaaccggtgcgaaagc 16450413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 222 - 289
Target Start/End: Complemental strand, 40780928 - 40780861
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaa 289  Q
    ||||| ||||||||||||| ||||||||||||||||||||| || || ||||| |||||  |||||||    
T  40780928 gtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaa 40780861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 197
Target Start/End: Original strand, 1446774 - 1446835
Alignment:
Q  136 aaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    |||||||||| |||||||||  || ||| || ||||||||||||| ||||||||||||||||    
T  1446774 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaatacc 1446835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 1446870 - 1446911
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccacca 263  Q
    ||||| ||||||||||||| ||||||||||||||||||||||    
T  1446870 gtgcgcatgcctctacgcatgagccggattagtcgtccacca 1446911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 197
Target Start/End: Complemental strand, 19651608 - 19651547
Alignment:
Q  136 aaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    ||||||||||||||||||||  || |||||| ||||||||||||| |||||||  |||||||    
T  19651608 aaccaagttgtttgggctccagtggcaatgagctccttccaaggacgtatccgaagaatacc 19651547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 197
Target Start/End: Original strand, 27248376 - 27248437
Alignment:
Q  136 aaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    |||||||||| |||||||||  || ||| || ||||||||||||| ||||||||||||||||    
T  27248376 aaccaagttgcttgggctccagtggcaacgagctccttccaaggacgtatccggggaatacc 27248437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 291
Target Start/End: Original strand, 29588780 - 29588849
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagc 291  Q
    ||||| |||||||||||||||||||||||||||  ||||||||| || ||||| ||| |  |||||||||    
T  29588780 gtgcgcatgcctctacgcacgagccggattagttatccaccattggtgggtcggaaatcgatgcgaaagc 29588849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 197
Target Start/End: Original strand, 29895735 - 29895796
Alignment:
Q  136 aaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    |||||||||| |||||||||  || ||| || ||||||||||||| ||||||||||||||||    
T  29895735 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaatacc 29895796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 197
Target Start/End: Complemental strand, 41163045 - 41162984
Alignment:
Q  136 aaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    |||||||||| |||||||||  |||||| || ||||||||||||| ||||||||| ||||||    
T  41163045 aaccaagttgcttgggctccagtgacaaggagctccttccaaggacgtatccgggaaatacc 41162984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 197
Target Start/End: Original strand, 53599008 - 53599069
Alignment:
Q  136 aaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    ||||||||||||||||||||  || ||| || ||||||||||||| ||| ||||||||||||    
T  53599008 aaccaagttgtttgggctccattggcaaggagctccttccaaggacgtacccggggaatacc 53599069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 290
Target Start/End: Original strand, 2559351 - 2559419
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaag 290  Q
    ||||| |||||||||||||| |||||||||| ||||||||| || || ||||| |||||  ||||||||    
T  2559351 gtgcgcatgcctctacgcacaagccggattactcgtccacctttggtgggtcggaaaccggtgcgaaag 2559419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 262
Target Start/End: Original strand, 3507295 - 3507354
Alignment:
Q  200 agggaacaacgcttgactagtggtgcgtatgcctctacgcacgagccggattagtcgtccacc 262  Q
    ||||||||||||||| ||||||   ||  ||||||||| ||||||||||||||||||||||||    
T  3507295 agggaacaacgcttggctagtg---cgcgtgcctctacacacgagccggattagtcgtccacc 3507354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 290
Target Start/End: Complemental strand, 7246713 - 7246645
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaag 290  Q
    ||||| ||||||||||||| ||||||||||||||| ||||| || || ||||| |||||  ||||||||    
T  7246713 gtgcgcatgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 7246645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 292
Target Start/End: Complemental strand, 36262828 - 36262764
Alignment:
Q  228 atgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    ||||||||||||||||| ||||||||||| ||||| || || ||||  |||||| ||||||||||    
T  36262828 atgcctctacgcacgagtcggattagtcgcccacctttggtgggtcagaaaccaatgcgaaagcc 36262764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 292
Target Start/End: Original strand, 38168306 - 38168370
Alignment:
Q  228 atgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    ||||||||||||| |||||||||||||||| |||| ||||| ||| | |||||  ||||||||||    
T  38168306 atgcctctacgcatgagccggattagtcgttcacctttagtgggttggaaaccggtgcgaaagcc 38168370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 43458657 - 43458697
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccacc 262  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  43458657 gtgcgcatgcctctacggacgagccggattagtcgtccacc 43458697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 262
Target Start/End: Complemental strand, 48317338 - 48317302
Alignment:
Q  226 gtatgcctctacgcacgagccggattagtcgtccacc 262  Q
    ||||||||||||||||||||||||||||||| |||||    
T  48317338 gtatgcctctacgcacgagccggattagtcgcccacc 48317302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 49260732 - 49260692
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccacc 262  Q
    ||||| ||||||||||||||||||||||||||||| |||||    
T  49260732 gtgcgcatgcctctacgcacgagccggattagtcgaccacc 49260692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 196
Target Start/End: Complemental strand, 49260828 - 49260768
Alignment:
Q  136 aaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatac 196  Q
    |||||||||| ||||  | | ||| ||| ||||||||||||||||||||||||||||||||    
T  49260828 aaccaagttgcttggatttcaatggcaaggaactccttccaaggatgtatccggggaatac 49260768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 197
Target Start/End: Original strand, 2559253 - 2559316
Alignment:
Q  134 taaaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    ||||||||||||||||||||||  || ||| || ||||||||||||| ||| | ||||||||||    
T  2559253 taaaccaagttgtttgggctccagtggcaacgagctccttccaaggacgtacctggggaatacc 2559316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 226 - 265
Target Start/End: Complemental strand, 41339458 - 41339419
Alignment:
Q  226 gtatgcctctacgcacgagccggattagtcgtccaccatt 265  Q
    ||||||||||||||||||| ||||||||||| ||||||||    
T  41339458 gtatgcctctacgcacgagacggattagtcgcccaccatt 41339419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 200
Target Start/End: Complemental strand, 295697 - 295631
Alignment:
Q  134 taaaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaataccaga 200  Q
    |||| ||| |||||||||||||  || ||| |||| ||||| ||||| |||||||||||||||||||    
T  295697 taaatcaaattgtttgggctccagtggcaaggaacaccttctaaggacgtatccggggaataccaga 295631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 280
Target Start/End: Complemental strand, 3159536 - 3159478
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaacc 280  Q
    ||||| ||||||||||||||||||| |||||||||  ||||||| || ||||| |||||    
T  3159536 gtgcgcatgcctctacgcacgagccagattagtcgctcaccattggtgggtcggaaacc 3159478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 8889066 - 8889124
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaacc 280  Q
    ||||| ||| ||||||||| ||||||||||||||||||||| || || ||||| |||||    
T  8889066 gtgcgcatggctctacgcatgagccggattagtcgtccacctttggtgggtcggaaacc 8889124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 256
Target Start/End: Original strand, 14567283 - 14567317
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcg 256  Q
    ||||| |||||||||||||||||||||||||||||    
T  14567283 gtgcgcatgcctctacgcacgagccggattagtcg 14567317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 292
Target Start/End: Original strand, 20128353 - 20128423
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    ||||| |||||| |||||||||||  |||||||||||||||||| || ||||  |||||  ||||||||||    
T  20128353 gtgcgcatgcctttacgcacgagctagattagtcgtccaccattggtgggtcagaaaccggtgcgaaagcc 20128423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 292
Target Start/End: Original strand, 53599104 - 53599174
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    ||||| ||||||||||||| ||||||||||| |||| |||| ||||| | ||| |||||  ||||||||||    
T  53599104 gtgcgcatgcctctacgcatgagccggattaatcgttcacctttagtggatcggaaaccggtgcgaaagcc 53599174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 197
Target Start/End: Original strand, 4736545 - 4736606
Alignment:
Q  136 aaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    |||||||||||||| |||||  || |||||| |||||| |||||||||| ||| ||||||||    
T  4736545 aaccaagttgtttgagctccagtggcaatgagctcctttcaaggatgtacccgaggaatacc 4736606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 199
Target Start/End: Complemental strand, 5473013 - 5472948
Alignment:
Q  134 taaaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaataccag 199  Q
    ||||| ||||||||||||||||  || ||| || ||| || |||||| ||||||||||||||||||    
T  5473013 taaactaagttgtttgggctccagtggcaaggagctcatttcaaggacgtatccggggaataccag 5472948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 280
Target Start/End: Original strand, 30317255 - 30317335
Alignment:
Q  197 cagagggaacaacgcttgactagtggtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaacc 280  Q
    |||||||||||||||||| | |||    || |||||||||||||||||||| |||||||| ||||| || || ||||| |||||    
T  30317255 cagagggaacaacgcttggccagta---cgaatgcctctacgcacgagccgaattagtcgcccacctttggtgggtcggaaacc 30317335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 197
Target Start/End: Complemental strand, 34667765 - 34667704
Alignment:
Q  136 aaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    |||||||||||||||||||   || ||| || ||||||||||||| ||| ||||||||||||    
T  34667765 aaccaagttgtttgggctctagtggcaaggagctccttccaaggacgtacccggggaatacc 34667704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 186
Target Start/End: Complemental strand, 45789685 - 45789632
Alignment:
Q  133 ataaaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatc 186  Q
    |||||||||||||||||||||||| || |||||| |||||| ||| || |||||    
T  45789685 ataaaccaagttgtttgggctccggtggcaatgagctcctttcaaagaagtatc 45789632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 295600 - 295560
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccacc 262  Q
    ||||| |||||||||||||||| || |||||||||||||||    
T  295600 gtgcgcatgcctctacgcacgaaccagattagtcgtccacc 295560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 6779255 - 6779295
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccacc 262  Q
    ||||| ||||||||| ||| |||||||||||||||||||||    
T  6779255 gtgcgcatgcctctatgcatgagccggattagtcgtccacc 6779295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 290
Target Start/End: Original strand, 14124060 - 14124128
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaag 290  Q
    ||||| |||||||||| ||||||||||||||||||  ||||||| || ||| | |||||  ||||||||    
T  14124060 gtgcgcatgcctctacacacgagccggattagtcgctcaccattggtgggttggaaaccggtgcgaaag 14124128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 14597967 - 14597927
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccacc 262  Q
    ||||| |||||||||||||||| | ||||||||||||||||    
T  14597967 gtgcgcatgcctctacgcacgaactggattagtcgtccacc 14597927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 261
Target Start/End: Original strand, 20354665 - 20354720
Alignment:
Q  203 gaacaacgcttgactagtggtgcgtatgcctctacgcacgagccggattagtcgtccac 261  Q
    |||||||||||| ||||||   || ||||||||||||| ||| ||||||||||||||||    
T  20354665 gaacaacgcttggctagtg---cgcatgcctctacgcatgagtcggattagtcgtccac 20354720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 36145282 - 36145242
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccacc 262  Q
    ||||| |||||||||| || |||||||||||||||||||||    
T  36145282 gtgcgcatgcctctacacatgagccggattagtcgtccacc 36145242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 54946299 - 54946351
Alignment:
Q  228 atgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaacc 280  Q
    ||||||||||||| ||||||||||||||| ||| |||| || ||||| |||||    
T  54946299 atgcctctacgcatgagccggattagtcgcccatcattggtgggtcggaaacc 54946351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 4e-17; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 222 - 291
Target Start/End: Original strand, 39474982 - 39475051
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagc 291  Q
    ||||| || |||||||||| ||||||||||||||||||||| ||||| |||||||||||| |||||||||    
T  39474982 gtgcgcatacctctacgcatgagccggattagtcgtccacctttagtgggtcgaaaaccagtgcgaaagc 39475051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 201 - 291
Target Start/End: Original strand, 34659250 - 34659337
Alignment:
Q  201 gggaacaacgcttgactagtggtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagc 291  Q
    |||||||||||||||| ||||   || ||||||||||||||||||||||||||||| |||||||| ||  ||||||||||  |||||||||    
T  34659250 gggaacaacgcttgaccagtg---cgcatgcctctacgcacgagccggattagtcgcccaccattggtgtgtcgaaaaccggtgcgaaagc 34659337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 222 - 279
Target Start/End: Original strand, 16802165 - 16802222
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaac 279  Q
    |||||||||||||||||||||||||||||||||||  ||||||| || ||||||||||    
T  16802165 gtgcgtatgcctctacgcacgagccggattagtcgctcaccattggtgggtcgaaaac 16802222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 222 - 291
Target Start/End: Original strand, 48804725 - 48804794
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagc 291  Q
    ||||| ||||||||||||| |||||||||||||||||||||||| || ||||| |||||  |||||||||    
T  48804725 gtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 48804794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 134 - 197
Target Start/End: Complemental strand, 34127785 - 34127722
Alignment:
Q  134 taaaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    |||||||||||| ||||||||| ||| ||| |||||||||||||||| ||| ||||||||||||    
T  34127785 taaaccaagttgcttgggctccaatggcaaggaactccttccaaggacgtacccggggaatacc 34127722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 228 - 291
Target Start/End: Complemental strand, 36619315 - 36619252
Alignment:
Q  228 atgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagc 291  Q
    ||||||||||||| |||||||||||||||||||||||| || |||| ||||||| || ||||||    
T  36619315 atgcctctacgcatgagccggattagtcgtccaccattggtgggtcaaaaaccagtgtgaaagc 36619252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 3353466 - 3353506
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccacc 262  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  3353466 gtgcgcatgcctctacgcacgagccggattagtcgtccacc 3353506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 41945515 - 41945555
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccacc 262  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  41945515 gtgcgcatgcctctacgcacgagccggattagtcgtccacc 41945555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 222 - 265
Target Start/End: Complemental strand, 24983486 - 24983443
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccatt 265  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||    
T  24983486 gtgcgcatgcctctacgcatgagccggattagtcgtccaccatt 24983443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 1605886 - 1605948
Alignment:
Q  135 aaaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    |||||||||||||||| |||| ||||||| || ||||||||||||| ||| |||| |||||||    
T  1605886 aaaccaagttgtttggactccaatgacaaggagctccttccaaggacgtacccggagaatacc 1605948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 292
Target Start/End: Complemental strand, 17748449 - 17748379
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    ||||| ||||||||||| ||||||||||||||||||||||| ||  | ||||| |||||  ||||||||||    
T  17748449 gtgcgcatgcctctacgtacgagccggattagtcgtccacctttgttgggtcggaaaccgatgcgaaagcc 17748379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 37514963 - 37515021
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaacc 280  Q
    ||||| ||| ||||||||||||||||||||| |||| |||||||||| ||||| |||||    
T  37514963 gtgcgcatgtctctacgcacgagccggattaatcgttcaccattagtgggtcggaaacc 37515021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 291
Target Start/End: Complemental strand, 4195269 - 4195200
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagc 291  Q
    ||||| ||||||||||||| |||||||||||| ||||||||||| || ||| | |||||  |||||||||    
T  4195269 gtgcgcatgcctctacgcatgagccggattagccgtccaccattggtgggttggaaaccgatgcgaaagc 4195200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 228 - 289
Target Start/End: Complemental strand, 27875149 - 27875088
Alignment:
Q  228 atgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaa 289  Q
    ||||||||||||| ||| || |||||||||||||| ||||| |||||||||||  |||||||    
T  27875149 atgcctctacgcatgagtcgcattagtcgtccacctttagtgggtcgaaaaccggtgcgaaa 27875088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 197
Target Start/End: Original strand, 48804629 - 48804690
Alignment:
Q  136 aaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    |||||||||| |||||||||  || ||| || ||||||||||||| ||||||||||||||||    
T  48804629 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaatacc 48804690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 199
Target Start/End: Complemental strand, 4228915 - 4228851
Alignment:
Q  135 aaaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaataccag 199  Q
    |||||||||||||||||||||   | ||| || ||||||||||||| ||||||| ||||||||||    
T  4228915 aaaccaagttgtttgggctccagcggcaaggagctccttccaaggacgtatccgaggaataccag 4228851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 4706045 - 4705993
Alignment:
Q  228 atgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaacc 280  Q
    |||| ||||||||||||| |||||||||||||||| || |||| |||||||||    
T  4706045 atgcttctacgcacgagctggattagtcgtccacctttggtagatcgaaaacc 4705993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 292
Target Start/End: Complemental strand, 5069876 - 5069812
Alignment:
Q  228 atgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    |||||||||||||| |||||||||||||| ||||| || || ||||| |||||  ||||||||||    
T  5069876 atgcctctacgcacaagccggattagtcgcccacctttggtgggtcggaaaccgatgcgaaagcc 5069812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 290
Target Start/End: Complemental strand, 38578934 - 38578866
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaag 290  Q
    ||||| ||||||||||||| ||||||||||||||| ||||| || || ||||| |||||  ||||||||    
T  38578934 gtgcgcatgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 38578866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 221 - 256
Target Start/End: Original strand, 32823284 - 32823319
Alignment:
Q  221 ggtgcgtatgcctctacgcacgagccggattagtcg 256  Q
    |||| |||||||||||||||||||||||||||||||    
T  32823284 ggtgtgtatgcctctacgcacgagccggattagtcg 32823319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 138 - 197
Target Start/End: Original strand, 34659174 - 34659233
Alignment:
Q  138 ccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    ||||||||||||||||||  || ||| || ||||||||| ||||||| ||||||||||||    
T  34659174 ccaagttgtttgggctccagtggcaaggagctccttccagggatgtacccggggaatacc 34659233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 5039582 - 5039520
Alignment:
Q  135 aaaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    |||||||||||||||||||||  || ||| || |||||||||  ||||||| |||||||||||    
T  5039582 aaaccaagttgtttgggctccagtggcaaggagctccttccatagatgtattcggggaatacc 5039520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 292
Target Start/End: Complemental strand, 10047935 - 10047873
Alignment:
Q  230 gcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    ||||||||||| |||| | ||||||||||||||||| || ||||| |||||  ||||||||||    
T  10047935 gcctctacgcatgagcagaattagtcgtccaccattggtgggtcggaaaccggtgcgaaagcc 10047873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 258
Target Start/End: Original strand, 30827340 - 30827370
Alignment:
Q  228 atgcctctacgcacgagccggattagtcgtc 258  Q
    |||||||||||||||||||||||||||||||    
T  30827340 atgcctctacgcacgagccggattagtcgtc 30827370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 292
Target Start/End: Complemental strand, 42210329 - 42210259
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    ||||| ||||||||||||||||||||||||| ||  ||||| || || ||||| |||||  ||||||||||    
T  42210329 gtgcgcatgcctctacgcacgagccggattaatcacccaccgttggtgggtcggaaaccgatgcgaaagcc 42210259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 291
Target Start/End: Complemental strand, 43346847 - 43346777
Alignment:
Q  221 ggtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagc 291  Q
    |||||| ||||||||||| |||||||||||||||||  || | || || ||||| |||||| |||||||||    
T  43346847 ggtgcgcatgcctctacgtacgagccggattagtcgctcatctttggtgggtcggaaaccagtgcgaaagc 43346777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 292
Target Start/End: Complemental strand, 43862039 - 43861969
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    ||||| ||||||||||||| |||||||||||||| | |||| || || | |||||||||  ||||||||||    
T  43862039 gtgcgcatgcctctacgcatgagccggattagtcattcacctttggtggatcgaaaaccggtgcgaaagcc 43861969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 292
Target Start/End: Original strand, 47341918 - 47341988
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    ||||| |||||||||||||||||| ||||| ||||| ||||||| || ||||| ||| |  ||||||||||    
T  47341918 gtgcgcatgcctctacgcacgagcaggattggtcgttcaccattggtgggtcggaaatcggtgcgaaagcc 47341988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 292
Target Start/End: Complemental strand, 48244423 - 48244353
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    |||||| |||||||||||| |||||||||||||||  |||| || || | |||||||||  ||||||||||    
T  48244423 gtgcgtttgcctctacgcatgagccggattagtcgctcacctttggtggatcgaaaaccggtgcgaaagcc 48244353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 197
Target Start/End: Complemental strand, 4195365 - 4195304
Alignment:
Q  136 aaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    |||||||||| |||||||||  || ||| || ||||| ||||||| ||||||||||||||||    
T  4195365 aaccaagttgcttgggctccagtggcaaggagctcctgccaaggacgtatccggggaatacc 4195304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 260
Target Start/End: Complemental strand, 4973176 - 4973139
Alignment:
Q  223 tgcgtatgcctctacgcacgagccggattagtcgtcca 260  Q
    |||| ||||||||||| |||||||||||||||||||||    
T  4973176 tgcgcatgcctctacgtacgagccggattagtcgtcca 4973139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 291
Target Start/End: Complemental strand, 8734753 - 8734684
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagc 291  Q
    ||||| ||||||| ||||||||||| ||||||||| ||||| || || ||||| |||||  |||||||||    
T  8734753 gtgcgcatgcctcaacgcacgagccagattagtcgcccacctttggtgggtcggaaaccggtgcgaaagc 8734684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 195
Target Start/End: Original strand, 11607075 - 11607136
Alignment:
Q  134 taaaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaata 195  Q
    |||| ||||||| |||||||||  || ||| |||||||||||||||| |||| |||||||||    
T  11607075 taaatcaagttgcttgggctccagtggcaaggaactccttccaaggacgtattcggggaata 11607136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 265
Target Start/End: Original strand, 14535339 - 14535376
Alignment:
Q  228 atgcctctacgcacgagccggattagtcgtccaccatt 265  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  14535339 atgcctctacgcacgagctggattagtcgcccaccatt 14535376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 197
Target Start/End: Original strand, 16802069 - 16802130
Alignment:
Q  136 aaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    ||||||||||  ||||||||  || |||||| ||||||||||||| ||| ||||||||||||    
T  16802069 aaccaagttgcctgggctccagtggcaatgagctccttccaaggacgtacccggggaatacc 16802130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 291
Target Start/End: Complemental strand, 21190847 - 21190778
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagc 291  Q
    ||||| ||||||||||||||||| | ||||||||| ||| || | || |||||||||||  |||||||||    
T  21190847 gtgcgcatgcctctacgcacgagtcagattagtcgcccatcaatggtgggtcgaaaaccggtgcgaaagc 21190778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 260
Target Start/End: Original strand, 23658198 - 23658259
Alignment:
Q  196 ccagagggaacaacgcttgactagtggtgcgtatgcctctacgcacgagccggattagtcgtcca 260  Q
    |||| |||||||||||||| | |||| |||  |||||||||| ||||||||||||||||||||||    
T  23658198 ccagggggaacaacgcttggccagtg-tgc--atgcctctacacacgagccggattagtcgtcca 23658259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 197
Target Start/End: Original strand, 43925458 - 43925519
Alignment:
Q  136 aaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    |||||||||| |||||||||  || ||| || ||||||||||||| ||| ||||||||||||    
T  43925458 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggggaatacc 43925519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 280
Target Start/End: Complemental strand, 28396229 - 28396169
Alignment:
Q  220 tggtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaacc 280  Q
    ||||||| |||||| |||||| ||||||||||||||||| ||| || || ||||| |||||    
T  28396229 tggtgcgcatgcctttacgcatgagccggattagtcgtctacctttggtgggtcggaaacc 28396169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 2e-16; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 131 - 280
Target Start/End: Complemental strand, 3654080 - 3653923
Alignment:
Q  131 caataaaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaataccag-----------agggaacaacgcttgactag 219  Q
    |||||||||||||||||||||||||  ||||||||| ||| ||||||||| ||| |||| ||||||| |           || |||||||||||||| |     
T  3654080 caataaaccaagttgtttgggctccagtgacaatgagctctttccaaggacgtacccggagaataccgggttcgattcctagagaacaacgcttgacca- 3653982  T
Q  220 tggtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaacc 280  Q
      ||||| ||||||||||||||||| ||||||||||||||||| || || | |||||||||    
T  3653981 --gtgcgcatgcctctacgcacgaggcggattagtcgtccacctttggtggatcgaaaacc 3653923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 292
Target Start/End: Original strand, 42086344 - 42086437
Alignment:
Q  196 ccagagggaacaacgcttgactagtggtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    |||| |||||||||||||||| ||||   || ||||||||||||| ||||||||||||||||||||| || || ||||| |||||  ||||||||||    
T  42086344 ccagggggaacaacgcttgaccagtg---cgcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagcc 42086437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 222 - 292
Target Start/End: Original strand, 1538471 - 1538541
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    ||||| ||||||||||||| ||||||||||| |||||||||||| || ||||| |||||  ||||||||||    
T  1538471 gtgcgcatgcctctacgcatgagccggattaatcgtccaccattggtgggtcggaaaccggtgcgaaagcc 1538541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 222 - 292
Target Start/End: Original strand, 19572764 - 19572834
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    ||||| ||||||||||||| |||||||||||||||| ||||||| || ||| | |||||| ||||||||||    
T  19572764 gtgcgcatgcctctacgcatgagccggattagtcgttcaccattggtgggttggaaaccagtgcgaaagcc 19572834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 222 - 278
Target Start/End: Complemental strand, 9168320 - 9168264
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaa 278  Q
    ||||| || |||||||||| ||||||||||||||||||||| ||||| |||||||||    
T  9168320 gtgcgcatacctctacgcatgagccggattagtcgtccacctttagtgggtcgaaaa 9168264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 228 - 291
Target Start/End: Original strand, 8513565 - 8513628
Alignment:
Q  228 atgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagc 291  Q
    ||||||||||||||||||| ||||||||||||||| || || ||||| |||||  |||||||||    
T  8513565 atgcctctacgcacgagccagattagtcgtccacctttggtgggtcggaaaccggtgcgaaagc 8513628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 222 - 265
Target Start/End: Original strand, 20525878 - 20525921
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccatt 265  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||    
T  20525878 gtgcgcatgcctctacgcatgagccggattagtcgtccaccatt 20525921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 134 - 197
Target Start/End: Original strand, 30349521 - 30349584
Alignment:
Q  134 taaaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    ||||||||||||||||||||||  || ||| ||  |||||||||||| ||||||||||||||||    
T  30349521 taaaccaagttgtttgggctccagtggcaaggagttccttccaaggacgtatccggggaatacc 30349584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 223 - 262
Target Start/End: Original strand, 37263281 - 37263320
Alignment:
Q  223 tgcgtatgcctctacgcacgagccggattagtcgtccacc 262  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  37263281 tgcgcatgcctctacgcacgagccggattagtcgtccacc 37263320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 292
Target Start/End: Complemental strand, 4016322 - 4016252
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    ||||| |||||||||| |||||||||||||||| |  ||||||| || ||||| |||||| ||||||||||    
T  4016322 gtgcgcatgcctctacacacgagccggattagttgctcaccattggtgggtcggaaaccagtgcgaaagcc 4016252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 292
Target Start/End: Original strand, 9805044 - 9805114
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    ||||| ||||||||||||| ||||||||||||||||||||| || || ||||| ||||   ||||||||||    
T  9805044 gtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaaacaggtgcgaaagcc 9805114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 280
Target Start/End: Complemental strand, 24463953 - 24463895
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaacc 280  Q
    ||||| ||||||||| ||||||||||||||||||| ||||| ||| | |||||||||||    
T  24463953 gtgcgcatgcctctatgcacgagccggattagtcgcccacctttactgggtcgaaaacc 24463895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 292
Target Start/End: Complemental strand, 38897786 - 38897716
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    ||||| ||||||||||||||||||||||||||| | ||||| || || | ||| |||||| ||||||||||    
T  38897786 gtgcgcatgcctctacgcacgagccggattagttgcccacctttggtggatcggaaaccagtgcgaaagcc 38897716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 262
Target Start/End: Complemental strand, 42291566 - 42291532
Alignment:
Q  228 atgcctctacgcacgagccggattagtcgtccacc 262  Q
    |||||||||||||||||||||||||||||||||||    
T  42291566 atgcctctacgcacgagccggattagtcgtccacc 42291532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 292
Target Start/End: Complemental strand, 42861285 - 42861215
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    ||||| ||||||||||||| ||||||||||| |||||||||||| || ||||| | |||  ||||||||||    
T  42861285 gtgcgcatgcctctacgcatgagccggattaatcgtccaccattggtgggtcggagaccggtgcgaaagcc 42861215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 223 - 292
Target Start/End: Original strand, 5079372 - 5079440
Alignment:
Q  223 tgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    |||| |||| |||||||||||||||||||||||| ||||| || || |||||||||||  ||||||||||    
T  5079372 tgcgcatgcttctacgcacgagccggattagtcgcccacctttggt-ggtcgaaaaccggtgcgaaagcc 5079440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 197
Target Start/End: Original strand, 19572668 - 19572729
Alignment:
Q  136 aaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    |||||||||| |||||||||  || ||| || ||||||||||||| ||||||||||||||||    
T  19572668 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaatacc 19572729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 291
Target Start/End: Complemental strand, 20682684 - 20682615
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagc 291  Q
    ||||| ||||||||||||||||||||||||| ||| ||||| ||||| ||| | |||||  |||||||||    
T  20682684 gtgcgcatgcctctacgcacgagccggattaatcgaccacctttagtgggttggaaaccggtgcgaaagc 20682615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 291
Target Start/End: Original strand, 43399168 - 43399237
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagc 291  Q
    ||||| |||||||||||||||||| |||||||||||||||  || || ||||| |||||  |||||||||    
T  43399168 gtgcgcatgcctctacgcacgagcaggattagtcgtccacatttggttggtcggaaaccggtgcgaaagc 43399237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 14588684 - 14588644
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccacc 262  Q
    ||||| ||||||||||||| |||||||||||||||||||||    
T  14588684 gtgcgcatgcctctacgcatgagccggattagtcgtccacc 14588644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 195
Target Start/End: Original strand, 20525781 - 20525841
Alignment:
Q  135 aaaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaata 195  Q
    ||||||||||| |||||||||  || ||| || |||||| |||||||||||||||||||||    
T  20525781 aaaccaagttgcttgggctccagtggcaaggagctcctttcaaggatgtatccggggaata 20525841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 292
Target Start/End: Complemental strand, 23247412 - 23247349
Alignment:
Q  228 atgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    ||||||||||||||||||| ||||||||||||||| || |  |||||||||||  ||||||||||    
T  23247412 atgcctctacgcacgagccagattagtcgtccacc-tttgatggtcgaaaaccggtgcgaaagcc 23247349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 25452971 - 25453022
Alignment:
Q  228 atgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaacc 280  Q
    ||||||||||||||||||||||||||||| ||| | ||||| |||||||||||    
T  25452971 atgcctctacgcacgagccggattagtcg-ccaactttagtcggtcgaaaacc 25453022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 279
Target Start/End: Original strand, 32874809 - 32874884
Alignment:
Q  201 gggaacaacgcttgactagtggtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaac 279  Q
    |||||||||||||||||||||   || || ||| ||||||||||||| |||| |||||||||||| || ||||| ||||    
T  32874809 gggaacaacgcttgactagtg---cgcatacctttacgcacgagccgaattaatcgtccaccattggtgggtcggaaac 32874884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 197
Target Start/End: Original strand, 5079273 - 5079336
Alignment:
Q  134 taaaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    |||||||||||||||||| |||| || ||| || ||||||||||| | ||||||| ||||||||    
T  5079273 taaaccaagttgtttgggttccggtggcaaagagctccttccaagcacgtatccgtggaatacc 5079336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 197
Target Start/End: Original strand, 9812814 - 9812877
Alignment:
Q  134 taaaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    ||||||||||||||||| ||||  || ||| || ||||||||||||| ||| ||||||||||||    
T  9812814 taaaccaagttgtttggactccagtggcaaggagctccttccaaggacgtacccggggaatacc 9812877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 197
Target Start/End: Original strand, 12704956 - 12705019
Alignment:
Q  134 taaaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    ||||||||||||||||| ||||  || ||| || ||||||||||||| ||| ||||||||||||    
T  12704956 taaaccaagttgtttggactccagtggcaaggagctccttccaaggacgtacccggggaatacc 12705019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 292
Target Start/End: Complemental strand, 5731987 - 5731917
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    ||||| ||||||||||| | ||||| |||||||||| |||| ||||| ||||| |||||  ||||||||||    
T  5731987 gtgcgcatgcctctacgtatgagccagattagtcgttcacctttagtgggtcggaaaccggtgcgaaagcc 5731917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 5732084 - 5732022
Alignment:
Q  135 aaaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    ||||||||||| |||||||||  || ||| || ||||||||||||| ||| ||||||||||||    
T  5732084 aaaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggggaatacc 5732022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 256
Target Start/End: Complemental strand, 6764524 - 6764490
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcg 256  Q
    ||||| |||||||||||||||||||||||||||||    
T  6764524 gtgcgcatgcctctacgcacgagccggattagtcg 6764490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 197
Target Start/End: Complemental strand, 6767219 - 6767153
Alignment:
Q  131 caataaaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    |||| |||||||||| |||||||||  || ||| || ||||||||||||| ||| ||||||||||||    
T  6767219 caattaaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggggaatacc 6767153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 262
Target Start/End: Complemental strand, 14974385 - 14974351
Alignment:
Q  228 atgcctctacgcacgagccggattagtcgtccacc 262  Q
    ||||||||||||| |||||||||||||||||||||    
T  14974385 atgcctctacgcatgagccggattagtcgtccacc 14974351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 41163623 - 41163561
Alignment:
Q  135 aaaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    |||||||||||||||||||||  || ||| || ||||||||||| | ||| ||||||||||||    
T  41163623 aaaccaagttgtttgggctccagtggcaaggagctccttccaagaacgtacccggggaatacc 41163561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 197
Target Start/End: Complemental strand, 18136443 - 18136382
Alignment:
Q  136 aaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    ||||||||||||||||||||  || ||| || |||||||||| || |||||||| |||||||    
T  18136443 aaccaagttgtttgggctccagtggcaaggagctccttccaaagacgtatccggagaatacc 18136382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 289
Target Start/End: Original strand, 20223099 - 20223160
Alignment:
Q  228 atgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaa 289  Q
    ||||||||| ||| ||| |  |||||||||||||| ||||||||||| |||||| |||||||    
T  20223099 atgcctctaggcatgagtcaaattagtcgtccacctttagtaggtcggaaaccattgcgaaa 20223160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 291
Target Start/End: Complemental strand, 24653878 - 24653810
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagc 291  Q
    ||||| || ||||||||||  |||||||||| |||||||||||| || |||||||||||  |||||||||    
T  24653878 gtgcgcatacctctacgcat-agccggattaatcgtccaccattggtgggtcgaaaaccgatgcgaaagc 24653810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 291
Target Start/End: Original strand, 40117455 - 40117524
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagc 291  Q
    ||||| ||||||||||||| ||||||||||| |||| |||| || || | |||||||||  |||||||||    
T  40117455 gtgcgcatgcctctacgcatgagccggattaatcgttcacctttggtggatcgaaaaccggtgcgaaagc 40117524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 258
Target Start/End: Original strand, 7336660 - 7336696
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtc 258  Q
    ||||| ||||||||||||||||||||||||| |||||    
T  7336660 gtgcgcatgcctctacgcacgagccggattaatcgtc 7336696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 12081948 - 12081988
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccacc 262  Q
    ||||| |||| ||||||||||||||| ||||||||||||||    
T  12081948 gtgcgcatgcatctacgcacgagccgaattagtcgtccacc 12081988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 20255409 - 20255449
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccacc 262  Q
    ||||| ||||||||||||| ||| |||||||||||||||||    
T  20255409 gtgcgcatgcctctacgcatgagtcggattagtcgtccacc 20255449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 292
Target Start/End: Complemental strand, 22655218 - 22655155
Alignment:
Q  228 atgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    |||||||||||||  || | ||||||||||||||| || || |||||||||||| ||||||||||    
T  22655218 atgcctctacgcataagtcagattagtcgtccaccttt-gtgggtcgaaaaccagtgcgaaagcc 22655155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 24875385 - 24875425
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccacc 262  Q
    ||||| ||| ||||||||||||||||||||| |||||||||    
T  24875385 gtgcgcatgtctctacgcacgagccggattaatcgtccacc 24875425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 256
Target Start/End: Original strand, 30995167 - 30995195
Alignment:
Q  228 atgcctctacgcacgagccggattagtcg 256  Q
    |||||||||||||||||||||||||||||    
T  30995167 atgcctctacgcacgagccggattagtcg 30995195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 39099840 - 39099788
Alignment:
Q  228 atgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaacc 280  Q
    ||||||||||||| ||||||||||||||| ||||| || || ||||| |||||    
T  39099840 atgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaacc 39099788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 199
Target Start/End: Original strand, 39728330 - 39728394
Alignment:
Q  135 aaaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaataccag 199  Q
    |||||||||||||||||||||  || ||| || ||| ||||||| | ||| ||||||||||||||    
T  39728330 aaaccaagttgtttgggctccagtggcaaggagctctttccaagaacgtacccggggaataccag 39728394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 2e-16; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 136 - 200
Target Start/End: Complemental strand, 14853530 - 14853466
Alignment:
Q  136 aaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaataccaga 200  Q
    ||||||||||||||||||||  || ||| ||||||||| ||||||||||||||||||||||||||    
T  14853530 aaccaagttgtttgggctccagtggcaaggaactcctttcaaggatgtatccggggaataccaga 14853466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 222 - 280
Target Start/End: Complemental strand, 6358218 - 6358160
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaacc 280  Q
    ||||| ||||||||||||| |||||||||||||||||||||||| || |||||||||||    
T  6358218 gtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcgaaaacc 6358160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 222 - 291
Target Start/End: Complemental strand, 25540471 - 25540402
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagc 291  Q
    ||||| ||||||||||||||||||||||||||||||||||| || || ||||| |||||  |||||||||    
T  25540471 gtgcgcatgcctctacgcacgagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagc 25540402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 228 - 279
Target Start/End: Original strand, 35946783 - 35946834
Alignment:
Q  228 atgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaac 279  Q
    |||||||||||||||||||||||||||||||||||||| || ||||| ||||    
T  35946783 atgcctctacgcacgagccggattagtcgtccaccattggtgggtcggaaac 35946834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 222 - 292
Target Start/End: Original strand, 10823099 - 10823169
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    ||||| ||||||||||||||||||||||||||||| ||||| || || ||||| |||||  ||||||||||    
T  10823099 gtgcgcatgcctctacgcacgagccggattagtcgcccaccttttgtgggtcggaaaccggtgcgaaagcc 10823169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 222 - 292
Target Start/End: Original strand, 12455349 - 12455419
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    ||||| |||||||||||||||||||||||||||||  ||||||| || ||||| |||||  ||||||||||    
T  12455349 gtgcgcatgcctctacgcacgagccggattagtcgctcaccattggtgggtcggaaaccggtgcgaaagcc 12455419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 222 - 292
Target Start/End: Original strand, 44945632 - 44945702
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    ||||| ||||||||||||||||||||||||||||| ||||| ||||| | ||| |||||  ||||||||||    
T  44945632 gtgcgcatgcctctacgcacgagccggattagtcgcccacctttagtggatcggaaaccggtgcgaaagcc 44945702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 228 - 292
Target Start/End: Original strand, 7747319 - 7747383
Alignment:
Q  228 atgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    ||||||||||||| |||||||||||||||| |||| ||||| ||||| |||||  ||||||||||    
T  7747319 atgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccggtgcgaaagcc 7747383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 34738394 - 34738342
Alignment:
Q  228 atgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaacc 280  Q
    ||||||||||||||||| |||||||||||||||||| | |||||||| |||||    
T  34738394 atgcctctacgcacgagtcggattagtcgtccaccaatggtaggtcggaaacc 34738342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 136 - 195
Target Start/End: Complemental strand, 3598915 - 3598856
Alignment:
Q  136 aaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaata 195  Q
    |||||||||||| |||||||  ||||||||| ||||||||||||| |||| |||||||||    
T  3598915 aaccaagttgttggggctccactgacaatgagctccttccaaggacgtattcggggaata 3598856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 228 - 291
Target Start/End: Original strand, 16325640 - 16325703
Alignment:
Q  228 atgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagc 291  Q
    ||||||||||||| ||||| |||||||||||||||||| || ||||| |||||  |||||||||    
T  16325640 atgcctctacgcatgagccagattagtcgtccaccattggtgggtcggaaaccggtgcgaaagc 16325703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 228 - 291
Target Start/End: Complemental strand, 41031967 - 41031904
Alignment:
Q  228 atgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagc 291  Q
    ||||||||||||||||||||||||||||  ||||| || || ||||| |||||| |||||||||    
T  41031967 atgcctctacgcacgagccggattagtcacccacctttggtgggtcggaaaccagtgcgaaagc 41031904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 37560212 - 37560270
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaacc 280  Q
    ||||| ||||||||||||||||||||||||| ||||||||| ||  | |||||||||||    
T  37560212 gtgcgcatgcctctacgcacgagccggattaatcgtccacctttgatgggtcgaaaacc 37560270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 292
Target Start/End: Original strand, 41220674 - 41220744
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    ||||| ||||||||||||| |||||| ||||||||| |||| ||||| ||||| |||||  ||||||||||    
T  41220674 gtgcgcatgcctctacgcatgagccgaattagtcgttcacctttagtgggtcggaaaccggtgcgaaagcc 41220744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 280
Target Start/End: Complemental strand, 42770718 - 42770660
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaacc 280  Q
    ||||| |||||||| |||||||||||||||| ||||||||| || || |||||||||||    
T  42770718 gtgcgcatgcctcttcgcacgagccggattaatcgtccacctttggtgggtcgaaaacc 42770660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 291
Target Start/End: Original strand, 44139530 - 44139592
Alignment:
Q  229 tgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagc 291  Q
    |||||||||||||||||||||||||||| |||||| | || ||||| |||||  |||||||||    
T  44139530 tgcctctacgcacgagccggattagtcgcccaccaatggtgggtcggaaaccggtgcgaaagc 44139592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 197
Target Start/End: Complemental strand, 2149358 - 2149297
Alignment:
Q  136 aaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    ||||||||||||||||||||  || ||| ||||| ||| |||||||||||| ||||||||||    
T  2149358 aaccaagttgtttgggctccagtggcaaggaacttctttcaaggatgtatctggggaatacc 2149297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 197
Target Start/End: Original strand, 7747217 - 7747278
Alignment:
Q  136 aaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    |||||||||| |||||||||  || ||| || ||||||||||||| ||||||||||||||||    
T  7747217 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaatacc 7747278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 197
Target Start/End: Original strand, 12864167 - 12864228
Alignment:
Q  136 aaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    ||||||||||||||||||||  |||||| || |||||||||| || |||| |||||||||||    
T  12864167 aaccaagttgtttgggctccagtgacaaggagctccttccaatgacgtattcggggaatacc 12864228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 279
Target Start/End: Complemental strand, 28525522 - 28525465
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaac 279  Q
    ||||| |||||||||||||||||||||||||||| |||||| ||| | ||||| ||||    
T  28525522 gtgcgcatgcctctacgcacgagccggattagtcatccacctttaatgggtcggaaac 28525465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 290
Target Start/End: Complemental strand, 9360815 - 9360747
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaag 290  Q
    ||||| |||||||||||||||||||| |||||||| ||||| ||||| || || |||||  ||||||||    
T  9360815 gtgcgcatgcctctacgcacgagccgaattagtcgcccacctttagtgggccggaaaccggtgcgaaag 9360747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 290
Target Start/End: Original strand, 12864263 - 12864331
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaag 290  Q
    ||||| |||||||| |||| ||||| |||||||||||||||||| || ||||| |||||  ||||||||    
T  12864263 gtgcgcatgcctctgcgcatgagccagattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 12864331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 290
Target Start/End: Complemental strand, 14169676 - 14169608
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaag 290  Q
    ||||| ||| ||||||||| ||||||||||||||||| |||||| || ||||| |||||  ||||||||    
T  14169676 gtgcgcatgtctctacgcatgagccggattagtcgtctaccattggtgggtcggaaaccggtgcgaaag 14169608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 196
Target Start/End: Original strand, 15079426 - 15079486
Alignment:
Q  136 aaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatac 196  Q
    |||||||||| |||||||||| || ||| |||| ||||||||||| ||| |||||||||||    
T  15079426 aaccaagttgcttgggctccggtggcaaggaacaccttccaaggacgtacccggggaatac 15079486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 22593173 - 22593213
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccacc 262  Q
    ||||| ||||||||||||| |||||||||||||||||||||    
T  22593173 gtgcgcatgcctctacgcatgagccggattagtcgtccacc 22593213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 260
Target Start/End: Original strand, 25549773 - 25549805
Alignment:
Q  228 atgcctctacgcacgagccggattagtcgtcca 260  Q
    |||||||||||||||||||||||||||||||||    
T  25549773 atgcctctacgcacgagccggattagtcgtcca 25549805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 196
Target Start/End: Original strand, 38005345 - 38005405
Alignment:
Q  136 aaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatac 196  Q
    ||||||||||||||||||||  || ||| || ||||||||||||| ||| |||||||||||    
T  38005345 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacccggggaatac 38005405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 222 - 261
Target Start/End: Original strand, 8410170 - 8410209
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccac 261  Q
    ||||| ||||||||||||||||||||||||||||| ||||    
T  8410170 gtgcgcatgcctctacgcacgagccggattagtcgcccac 8410209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 133 - 196
Target Start/End: Complemental strand, 20963275 - 20963212
Alignment:
Q  133 ataaaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatac 196  Q
    |||||| ||||||||||||||||  || ||| || |||||||||| || |||||||||||||||    
T  20963275 ataaacaaagttgtttgggctccagtggcaaggacctccttccaatgacgtatccggggaatac 20963212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 290
Target Start/End: Complemental strand, 16813226 - 16813164
Alignment:
Q  228 atgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaag 290  Q
    ||||||||| ||||||||||||||||||||||| | || |||||| | ||| || ||||||||    
T  16813226 atgcctctatgcacgagccggattagtcgtccatctttggtaggttggaaatcagtgcgaaag 16813164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 290
Target Start/End: Complemental strand, 16852505 - 16852443
Alignment:
Q  228 atgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaag 290  Q
    ||||||||| ||||||||||||||||||||||| | || |||||| | ||| || ||||||||    
T  16852505 atgcctctatgcacgagccggattagtcgtccatctttggtaggttggaaatcagtgcgaaag 16852443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 197
Target Start/End: Original strand, 21286390 - 21286448
Alignment:
Q  139 caagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    ||||||||||| |||||  || ||| || ||||||||||||| ||||||||||||||||    
T  21286390 caagttgtttgagctccagtggcaaggagctccttccaaggacgtatccggggaatacc 21286448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 27725979 - 27726037
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaacc 280  Q
    ||||| |||||||||||||| |||||||||||||| |||||| | || ||||| |||||    
T  27725979 gtgcgcatgcctctacgcactagccggattagtcgcccaccaatggtgggtcggaaacc 27726037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 252
Target Start/End: Complemental strand, 45263757 - 45263704
Alignment:
Q  196 ccagagggaacaacgcttgactagtggtgcgtatgcctctacgcacgagccggatta 252  Q
    ||||||||||||||||||| | ||||   || |||||||||||||||||||||||||    
T  45263757 ccagagggaacaacgcttggccagtg---cgcatgcctctacgcacgagccggatta 45263704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 197
Target Start/End: Original strand, 331444 - 331505
Alignment:
Q  136 aaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    |||||||||| |||||||||  || |||||| ||| ||||||||| ||| ||||||||||||    
T  331444 aaccaagttgcttgggctccagtggcaatgagctctttccaaggacgtacccggggaatacc 331505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 291
Target Start/End: Complemental strand, 3643954 - 3643885
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagc 291  Q
    ||||| ||||||||||||| |||| |||||||||||||||| || || || || |||||  |||||||||    
T  3643954 gtgcgcatgcctctacgcatgagctggattagtcgtccacctttggtgggccggaaaccgttgcgaaagc 3643885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 261
Target Start/End: Original strand, 4120180 - 4120213
Alignment:
Q  228 atgcctctacgcacgagccggattagtcgtccac 261  Q
    |||||||||||||||||| |||||||||||||||    
T  4120180 atgcctctacgcacgagctggattagtcgtccac 4120213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 279
Target Start/End: Complemental strand, 10026683 - 10026626
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaac 279  Q
    ||||| ||||||||||||| ||||||||||||||| ||||| || || ||||| ||||    
T  10026683 gtgcgcatgcctctacgcatgagccggattagtcgaccacctttggtgggtcggaaac 10026626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 279
Target Start/End: Complemental strand, 10046544 - 10046487
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaac 279  Q
    ||||| ||||||||||||| ||||||||||||||| ||||| || || ||||| ||||    
T  10046544 gtgcgcatgcctctacgcatgagccggattagtcgaccacctttggtgggtcggaaac 10046487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 197
Target Start/End: Complemental strand, 10046639 - 10046578
Alignment:
Q  136 aaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    |||||||||| ||||||||| ||| ||| || ||||||||||| | |||||||| |||||||    
T  10046639 aaccaagttgcttgggctccaatggcaaggagctccttccaagaacgtatccggagaatacc 10046578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 291
Target Start/End: Original strand, 11069917 - 11069986
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagc 291  Q
    ||||| || ||||||||||||||| | |||||||||||||| || || ||||| |||||  |||||||||    
T  11069917 gtgcgcatacctctacgcacgagctgaattagtcgtccaccgttggtgggtcggaaaccgatgcgaaagc 11069986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 292
Target Start/End: Complemental strand, 20116678 - 20116609
Alignment:
Q  223 tgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    |||| ||||||||||||| |||||||||||| |||||||| ||  | ||||| |||||  ||||||||||    
T  20116678 tgcgcatgcctctacgcatgagccggattagccgtccacctttgatgggtcggaaaccggtgcgaaagcc 20116609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 197
Target Start/End: Complemental strand, 20612699 - 20612638
Alignment:
Q  136 aaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    |||||||||| |||||||||  || ||| || |||||||||||| ||||| |||||||||||    
T  20612699 aaccaagttgcttgggctccagtggcaaggagctccttccaaggttgtattcggggaatacc 20612638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 291
Target Start/End: Complemental strand, 28616446 - 28616377
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagc 291  Q
    ||||| ||||||||||||||||||| ||||||||| ||| | ||||| ||||  |||||  |||||||||    
T  28616446 gtgcgcatgcctctacgcacgagccagattagtcgcccatctttagtgggtcagaaaccggtgcgaaagc 28616377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 289
Target Start/End: Complemental strand, 1773700 - 1773644
Alignment:
Q  233 tctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaa 289  Q
    |||||||| |||  ||||||||||||||||||| || |||||||||||  |||||||    
T  1773700 tctacgcatgagttggattagtcgtccaccattggtgggtcgaaaaccggtgcgaaa 1773644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 256
Target Start/End: Original strand, 7787101 - 7787129
Alignment:
Q  228 atgcctctacgcacgagccggattagtcg 256  Q
    |||||||||||||||||||||||||||||    
T  7787101 atgcctctacgcacgagccggattagtcg 7787129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 291
Target Start/End: Complemental strand, 18902615 - 18902528
Alignment:
Q  201 gggaacaacgcttgactagtggtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagc 291  Q
    |||||||||||||||| ||||   ||  || ||||||||||||||| ||||||||| ||||| || || ||||| |||||  |||||||||    
T  18902615 gggaacaacgcttgaccagtg---cgcgtgtctctacgcacgagccagattagtcgcccacctttggtgggtcggaaaccggtgcgaaagc 18902528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 289
Target Start/End: Complemental strand, 20612602 - 20612534
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccgg-attagtcgtccaccattagtaggtcgaaaaccactgcgaaa 289  Q
    ||||| ||||||||| ||| ||||||| ||||||||||||||||| || ||||| |||||  |||||||    
T  20612602 gtgcgcatgcctctatgcatgagccgggattagtcgtccaccattggtgggtcggaaaccggtgcgaaa 20612534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 256
Target Start/End: Complemental strand, 21180375 - 21180347
Alignment:
Q  228 atgcctctacgcacgagccggattagtcg 256  Q
    |||||||||||||||||||||||||||||    
T  21180375 atgcctctacgcacgagccggattagtcg 21180347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 260
Target Start/End: Original strand, 24179613 - 24179645
Alignment:
Q  228 atgcctctacgcacgagccggattagtcgtcca 260  Q
    ||||||||||||| |||||||||||||||||||    
T  24179613 atgcctctacgcatgagccggattagtcgtcca 24179645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 38962802 - 38962842
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccacc 262  Q
    ||||| ||||||||||||| || ||||||||||||||||||    
T  38962802 gtgcgcatgcctctacgcatgaaccggattagtcgtccacc 38962842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 39201569 - 39201517
Alignment:
Q  228 atgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaacc 280  Q
    ||||||||||||| |||||||||||||||| |||| || || ||||| |||||    
T  39201569 atgcctctacgcatgagccggattagtcgttcacctttggtgggtcggaaacc 39201517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 197
Target Start/End: Original strand, 41187793 - 41187853
Alignment:
Q  137 accaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    |||||||||| |||||| || || ||| || ||||||||||||| ||||||| ||||||||    
T  41187793 accaagttgtctgggcttcggtggcaaggagctccttccaaggacgtatccgaggaatacc 41187853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 222 - 292
Target Start/End: Original strand, 6100515 - 6100585
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    ||||| ||||| ||||||| |||||||||||||||| |||| ||||| ||||||||||| |||||||||||    
T  6100515 gtgcgcatgccactacgcatgagccggattagtcgttcacctttagtgggtcgaaaaccgctgcgaaagcc 6100585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 222 - 292
Target Start/End: Original strand, 10927649 - 10927719
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    ||||| ||||||||||||| |||||||||||||||| |||| ||||| ||||| |||||  ||||||||||    
T  10927649 gtgcgcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccgatgcgaaagcc 10927719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 133 - 197
Target Start/End: Complemental strand, 2467284 - 2467220
Alignment:
Q  133 ataaaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    ||||||||||||| |||||||||  || ||| || ||||||||||||| ||||||||||||||||    
T  2467284 ataaaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaatacc 2467220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 136 - 196
Target Start/End: Original strand, 17845680 - 17845740
Alignment:
Q  136 aaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatac 196  Q
    ||||||||||||||||||||  || |||||| |||||||||||||||||  ||||||||||    
T  17845680 aaccaagttgtttgggctccagtggcaatgagctccttccaaggatgtactcggggaatac 17845740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 222 - 289
Target Start/End: Complemental strand, 15884623 - 15884556
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaa 289  Q
    ||||| ||||||||||||||||||||||||||||| ||||| || || ||||| |||||  |||||||    
T  15884623 gtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaa 15884556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 203 - 280
Target Start/End: Original strand, 18374037 - 18374111
Alignment:
Q  203 gaacaacgcttgactagtggtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaacc 280  Q
    |||||||||||||| ||||   || ||||||||||||| ||||||||||||||||||| | || || |||||||||||    
T  18374037 gaacaacgcttgaccagtg---cgcatgcctctacgcatgagccggattagtcgtccaactttggtgggtcgaaaacc 18374111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 197
Target Start/End: Complemental strand, 44893441 - 44893380
Alignment:
Q  136 aaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    ||||||||||||||||||||  || ||| || ||||||||||||| ||| ||||||||||||    
T  44893441 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacccggggaatacc 44893380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 13358017 - 13357965
Alignment:
Q  228 atgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaacc 280  Q
    ||||||||| |||||||||||||||||||||| || ||||| ||||| |||||    
T  13358017 atgcctctatgcacgagccggattagtcgtccccctttagtgggtcggaaacc 13357965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 132 - 195
Target Start/End: Complemental strand, 3418680 - 3418617
Alignment:
Q  132 aataaaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaata 195  Q
    ||||||||||||||||||| ||||  || ||| || ||||||||||||| ||||| ||||||||    
T  3418680 aataaaccaagttgtttggactcccgtggcaaggagctccttccaaggacgtatctggggaata 3418617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 222 - 289
Target Start/End: Complemental strand, 4479363 - 4479296
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaa 289  Q
    ||||| ||||||||||||| |||| |||||||||||||||| || || ||||| |||||  |||||||    
T  4479363 gtgcgcatgcctctacgcatgagctggattagtcgtccacctttggtgggtcggaaaccggtgcgaaa 4479296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 18373953 - 18374020
Alignment:
Q  132 aataaaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaataccag 199  Q
    ||||||| |||||||||||||||| ||| ||| || ||| |||||| ||| |||||||| ||||||||    
T  18373953 aataaactaagttgtttgggctccaatggcaaggagctcattccaaagatatatccgggaaataccag 18374020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 130 - 197
Target Start/End: Original strand, 24837183 - 24837250
Alignment:
Q  130 acaataaaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    |||||||||||||||| |||||||||  || ||| || ||||||||||| | ||| ||||||||||||    
T  24837183 acaataaaccaagttgcttgggctccagtggcaaggagctccttccaagtacgtacccggggaatacc 24837250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 292
Target Start/End: Complemental strand, 14666138 - 14666068
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    ||||| |||||||||||||| |||| ||||||||| ||||  || || |||||||||||  ||||||||||    
T  14666138 gtgcgcatgcctctacgcacaagccagattagtcgcccacagttggtgggtcgaaaaccggtgcgaaagcc 14666068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 197
Target Start/End: Original strand, 8141049 - 8141110
Alignment:
Q  136 aaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    ||||||||||||||||||||  || ||| || || |||||||||| |||| |||||||||||    
T  8141049 aaccaagttgtttgggctccagtggcaaggagctgcttccaaggacgtattcggggaatacc 8141110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 8803106 - 8803167
Alignment:
Q  231 cctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    |||||||||||||||||||||||||| ||| || | || ||||| |||||  ||||||||||    
T  8803106 cctctacgcacgagccggattagtcgcccatcaatggtgggtcggaaaccgatgcgaaagcc 8803167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 197
Target Start/End: Original strand, 13085471 - 13085532
Alignment:
Q  136 aaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    |||||| |||||||||||||  || | | || ||||||||||||| ||||||||||||||||    
T  13085471 aaccaacttgtttgggctccagtggcgaggagctccttccaaggacgtatccggggaatacc 13085532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 197
Target Start/End: Complemental strand, 14666234 - 14666173
Alignment:
Q  136 aaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    |||||||||| |||||||||  || ||| || ||| ||||||||| ||||||||||||||||    
T  14666234 aaccaagttgcttgggctccagtggcaaggagctcattccaaggacgtatccggggaatacc 14666173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 197
Target Start/End: Complemental strand, 38922577 - 38922516
Alignment:
Q  136 aaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    |||||||||| |||||||||  || ||| || ||||||||||||| ||| ||||||||||||    
T  38922577 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggggaatacc 38922516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 260
Target Start/End: Original strand, 43027349 - 43027386
Alignment:
Q  223 tgcgtatgcctctacgcacgagccggattagtcgtcca 260  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  43027349 tgcgcatgcctctacgcatgagccggattagtcgtcca 43027386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 291
Target Start/End: Original strand, 43032944 - 43033013
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagc 291  Q
    ||||| |||||||||| |||||||||||||||||| ||||| || || ||||  |||||  |||||||||    
T  43032944 gtgcgcatgcctctacacacgagccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaagc 43033013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 262
Target Start/End: Original strand, 583836 - 583895
Alignment:
Q  200 agggaacaacgcttgactagtggtgcgtatgcctctacgcacgagccggattagtcgtccacc 262  Q
    ||||||||||||||||| ||||   || ||||||||||||| ||| ||||||||||| |||||    
T  583836 agggaacaacgcttgaccagtg---cgcatgcctctacgcatgagtcggattagtcgcccacc 583895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 292
Target Start/End: Original strand, 2964125 - 2964189
Alignment:
Q  228 atgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    |||||||||||||||| |||||||||||| ||||| || || ||||  |||||  ||||||||||    
T  2964125 atgcctctacgcacgaaccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaagcc 2964189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 196
Target Start/End: Complemental strand, 10535566 - 10535506
Alignment:
Q  136 aaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatac 196  Q
    ||||||||||||||| ||||  || ||| || ||||||||||||| ||||||| |||||||    
T  10535566 aaccaagttgtttggactccagtggcaaggagctccttccaaggacgtatccgaggaatac 10535506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 262
Target Start/End: Original strand, 26570971 - 26571007
Alignment:
Q  226 gtatgcctctacgcacgagccggattagtcgtccacc 262  Q
    |||||| |||||||| |||||||||||||||||||||    
T  26570971 gtatgcatctacgcatgagccggattagtcgtccacc 26571007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 222 - 292
Target Start/End: Complemental strand, 49021271 - 49021201
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    ||||| ||||||||||||| |||||||||||||||||||||||| || ||||| |||||  ||||||||||    
T  49021271 gtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagcc 49021201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 134 - 197
Target Start/End: Complemental strand, 42412940 - 42412877
Alignment:
Q  134 taaaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    |||||||||||| ||||||||| ||| ||| || ||||||||||||| ||||||||||||||||    
T  42412940 taaaccaagttgcttgggctccaatggcaaggagctccttccaaggacgtatccggggaatacc 42412877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 135 - 197
Target Start/End: Original strand, 33251604 - 33251666
Alignment:
Q  135 aaaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    |||||||||||||||||||||| || |||||| ||||||||||||| ||||  ||||||||||    
T  33251604 aaaccaagttgtttgggctccggtggcaatgagctccttccaaggacgtattaggggaatacc 33251666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 222 - 292
Target Start/End: Complemental strand, 47749173 - 47749103
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    ||||| |||||||||||||||||||| |||||||| ||||| || |||||||| |||||  ||||||||||    
T  47749173 gtgcgcatgcctctacgcacgagccgaattagtcgcccacctttggtaggtcggaaaccgatgcgaaagcc 47749103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 222 - 292
Target Start/End: Original strand, 54237487 - 54237557
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    ||||| ||| ||||||||| ||||||||| ||||||||||||||||| ||||| |||||  ||||||||||    
T  54237487 gtgcgcatgtctctacgcatgagccggataagtcgtccaccattagtgggtcggaaaccggtgcgaaagcc 54237557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 228 - 292
Target Start/End: Complemental strand, 28572273 - 28572209
Alignment:
Q  228 atgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    ||||||||||||||||||||||||||||| ||||| || || ||||| |||||  ||||||||||    
T  28572273 atgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaagcc 28572209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 222 - 290
Target Start/End: Original strand, 54261265 - 54261333
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaag 290  Q
    ||||| ||||||||||||| |||||||||||||||| |||| ||||| ||||| |||||  ||||||||    
T  54261265 gtgcgcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccggtgcgaaag 54261333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 222 - 265
Target Start/End: Original strand, 49198390 - 49198433
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccatt 265  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||    
T  49198390 gtgcgcatgcctctacgcatgagccggattagtcgtccaccatt 49198433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 196 - 289
Target Start/End: Complemental strand, 51683045 - 51682955
Alignment:
Q  196 ccagagggaacaacgcttgactagtggtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaa 289  Q
    |||| |||||||||||||||| ||||   || |||||||| | |||||||||||||||||| |||||| | || ||||| |||||| |||||||    
T  51683045 ccagggggaacaacgcttgaccagtg---cgcatgcctctccacacgagccggattagtcgcccaccaatggtgggtcggaaaccagtgcgaaa 51682955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 292
Target Start/End: Complemental strand, 3136762 - 3136692
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    ||||| ||||||||||||| ||| ||||||||||||||||| || || ||||| |||||  ||||||||||    
T  3136762 gtgcgcatgcctctacgcatgagtcggattagtcgtccacctttggttggtcggaaaccggtgcgaaagcc 3136692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 292
Target Start/End: Original strand, 25294999 - 25295069
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    ||||| ||||||||| ||| |||||||||||||||||||||||| || ||| | |||||  ||||||||||    
T  25294999 gtgcgcatgcctctatgcatgagccggattagtcgtccaccattggtgggttggaaaccggtgcgaaagcc 25295069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 292
Target Start/End: Original strand, 29127958 - 29128028
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    ||||| ||||||||||||| ||||||||||||||| ||||| || || ||||| |||||  ||||||||||    
T  29127958 gtgcgcatgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccgatgcgaaagcc 29128028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 290
Target Start/End: Complemental strand, 30767309 - 30767247
Alignment:
Q  228 atgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaag 290  Q
    ||||||||||||||||||||||||||||| ||||| || || ||||| |||| | ||||||||    
T  30767309 atgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaactagtgcgaaag 30767247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 280
Target Start/End: Complemental strand, 43330800 - 43330742
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaacc 280  Q
    ||||| ||||||||||||||||||||||||||||| ||||| || || |||| ||||||    
T  43330800 gtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcaaaaacc 43330742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 292
Target Start/End: Original strand, 47219183 - 47219253
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    ||||| ||||||||||||| ||||||||||||||||||||| ||  | ||||| |||||  ||||||||||    
T  47219183 gtgcgcatgcctctacgcatgagccggattagtcgtccacctttgatgggtcggaaaccggtgcgaaagcc 47219253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 280
Target Start/End: Complemental strand, 50405671 - 50405613
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaacc 280  Q
    ||||| ||||||||||||||||| ||||||||||| |||||||| || ||||| |||||    
T  50405671 gtgcgcatgcctctacgcacgagtcggattagtcgcccaccattggtgggtcggaaacc 50405613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 292
Target Start/End: Complemental strand, 51060349 - 51060279
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    ||||| ||||||||||||| || | ||||||||||||||||||| || ||||| |||||  ||||||||||    
T  51060349 gtgcgcatgcctctacgcatgaactggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagcc 51060279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 291
Target Start/End: Original strand, 7648779 - 7648848
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagc 291  Q
    ||||| || |||||||||||||||||||||||||| ||||| ||  | |||||||| ||| |||||||||    
T  7648779 gtgcgcatacctctacgcacgagccggattagtcgcccacctttgttgggtcgaaatccaatgcgaaagc 7648848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 197
Target Start/End: Original strand, 13893869 - 13893930
Alignment:
Q  136 aaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    ||||||||||||||||||||  || ||| || ||||||||||||| || |||||||||||||    
T  13893869 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtgtccggggaatacc 13893930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 223 - 292
Target Start/End: Original strand, 13893966 - 13894035
Alignment:
Q  223 tgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    |||| |||||||||| |||||||||||||||||| ||||| || || | |||||||||  ||||||||||    
T  13893966 tgcgcatgcctctacacacgagccggattagtcgcccacctttggtggatcgaaaaccggtgcgaaagcc 13894035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 197
Target Start/End: Original strand, 25294903 - 25294964
Alignment:
Q  136 aaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    |||||||||| |||||||||  || ||| || ||||||||||||| ||||||||||||||||    
T  25294903 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaatacc 25294964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 197
Target Start/End: Complemental strand, 26207965 - 26207904
Alignment:
Q  136 aaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    |||||||||| |||||||||  || ||| || ||||||||||||||||| ||||||||||||    
T  26207965 aaccaagttgcttgggctccagtggcaaggagctccttccaaggatgtacccggggaatacc 26207904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 279
Target Start/End: Complemental strand, 45402419 - 45402362
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaac 279  Q
    ||||| ||||||||||||| |||||||||||||||| |||| ||||| ||||| ||||    
T  45402419 gtgcgcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaac 45402362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 197
Target Start/End: Original strand, 45877397 - 45877458
Alignment:
Q  136 aaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    ||||||||||||||||||||  || ||| || | ||||||||||| ||||||||||||||||    
T  45877397 aaccaagttgtttgggctccagtggcaaggagccccttccaaggacgtatccggggaatacc 45877458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 132 - 197
Target Start/End: Original strand, 54261165 - 54261230
Alignment:
Q  132 aataaaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    ||||||||||||||||||||||||  || ||| || ||||||||||||| ||| | ||||||||||    
T  54261165 aataaaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacctggggaatacc 54261230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 292
Target Start/End: Original strand, 15320231 - 15320295
Alignment:
Q  228 atgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    ||||||||||||||||||||||||||||| ||||| || || ||||  |||||  ||||||||||    
T  15320231 atgcctctacgcacgagccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaagcc 15320295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 290
Target Start/End: Complemental strand, 29762223 - 29762155
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaag 290  Q
    ||||| ||||||||| ||| |||| ||||||||||||||||||| || ||||| |||||  ||||||||    
T  29762223 gtgcgcatgcctctatgcatgagctggattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 29762155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 195
Target Start/End: Complemental strand, 29762320 - 29762260
Alignment:
Q  135 aaaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaata 195  Q
    ||||||||||| |||||||||  || ||| || |||||||||||||||||| |||||||||    
T  29762320 aaaccaagttgcttgggctccagtggcaaggagctccttccaaggatgtattcggggaata 29762260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 292
Target Start/End: Original strand, 33251707 - 33251771
Alignment:
Q  228 atgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    ||||||||||||| ||||||||||||||||||||  ||  | |||||||||| | ||||||||||    
T  33251707 atgcctctacgcatgagccggattagtcgtccacatttgatgggtcgaaaacgagtgcgaaagcc 33251771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 222 - 289
Target Start/End: Complemental strand, 3507601 - 3507534
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaa 289  Q
    ||||| |||||||||||||||||||||||||||||  |||| || || ||||| |||||  |||||||    
T  3507601 gtgcgcatgcctctacgcacgagccggattagtcgctcacctttggtgggtcggaaaccggtgcgaaa 3507534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 197
Target Start/End: Original strand, 15320127 - 15320190
Alignment:
Q  134 taaaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    ||||||||||||||||| ||||  || ||| || ||||||||||||| ||| ||||||||||||    
T  15320127 taaaccaagttgtttggactccagtggcaaggagctccttccaaggacgtacccggggaatacc 15320190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 222 - 265
Target Start/End: Original strand, 29135952 - 29135995
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccatt 265  Q
    ||||| ||||||||||||| |||||||||||||| |||||||||    
T  29135952 gtgcgcatgcctctacgcatgagccggattagtcttccaccatt 29135995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 279
Target Start/End: Original strand, 49543564 - 49543615
Alignment:
Q  228 atgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaac 279  Q
    |||||||||||||||||||| |||||||| ||||| ||||| ||||| ||||    
T  49543564 atgcctctacgcacgagccgaattagtcgcccacctttagtgggtcggaaac 49543615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 136 - 199
Target Start/End: Complemental strand, 51683118 - 51683055
Alignment:
Q  136 aaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaataccag 199  Q
    ||||||||||||||||||||  || | | || |||||||||| || ||||||||||||||||||    
T  51683118 aaccaagttgtttgggctccagtggcgaggagctccttccaaagacgtatccggggaataccag 51683055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 292
Target Start/End: Original strand, 928639 - 928709
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    ||||| ||||| |||||||||||||||||||||| |||||| || ||  |||||||| |  ||||||||||    
T  928639 gtgcgcatgccgctacgcacgagccggattagtcatccacctttggtgagtcgaaaatcggtgcgaaagcc 928709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 280
Target Start/End: Complemental strand, 15795562 - 15795504
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaacc 280  Q
    ||||| |||||||||||||||||| | |||||||| |||||| | || |||||||||||    
T  15795562 gtgcgcatgcctctacgcacgagctgaattagtcgcccaccaatggtgggtcgaaaacc 15795504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 292
Target Start/End: Complemental strand, 36043730 - 36043672
Alignment:
Q  234 ctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    ||||||||||||||||||||||| ||||| || || ||||| |||||  ||||||||||    
T  36043730 ctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaagcc 36043672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 290
Target Start/End: Original strand, 45877499 - 45877561
Alignment:
Q  228 atgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaag 290  Q
    ||||||||||||| |||||||||||||||| |||||||  | ||||| |||||  ||||||||    
T  45877499 atgcctctacgcatgagccggattagtcgttcaccattgatgggtcggaaaccggtgcgaaag 45877561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 289
Target Start/End: Complemental strand, 2029329 - 2029268
Alignment:
Q  228 atgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaa 289  Q
    ||||||||||||| |||| |||||||||| ||||||||  | ||||| |||||| |||||||    
T  2029329 atgcctctacgcatgagctggattagtcgcccaccattgatgggtcgcaaaccagtgcgaaa 2029268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 291
Target Start/End: Original strand, 7328883 - 7328951
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagc 291  Q
    ||||| |||||| |||||| ||||||||||||||| ||||| || || |||||||||||  |||||||||    
T  7328883 gtgcgcatgcct-tacgcatgagccggattagtcgcccacctttggtgggtcgaaaaccggtgcgaaagc 7328951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 260
Target Start/End: Original strand, 19873420 - 19873449
Alignment:
Q  231 cctctacgcacgagccggattagtcgtcca 260  Q
    ||||||||||||||||||||||||||||||    
T  19873420 cctctacgcacgagccggattagtcgtcca 19873449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 291
Target Start/End: Original strand, 23511606 - 23511675
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagc 291  Q
    ||||| ||||||||||||| ||| ||||||| ||||||||| ||  | |||||||||||  |||||||||    
T  23511606 gtgcgcatgcctctacgcatgagtcggattaatcgtccacctttgatgggtcgaaaaccggtgcgaaagc 23511675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 197
Target Start/End: Original strand, 48341963 - 48342024
Alignment:
Q  136 aaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    ||||||||||||||||||||  || ||| || ||||||||||||| ||| | ||||||||||    
T  48341963 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacctggggaatacc 48342024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 197
Target Start/End: Original strand, 49198294 - 49198355
Alignment:
Q  136 aaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    ||||||||||||||||||||  |||||| ||  | ||||||||||  |||||||||||||||    
T  49198294 aaccaagttgtttgggctccagtgacaaggagtttcttccaaggacatatccggggaatacc 49198355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 256
Target Start/End: Complemental strand, 7310765 - 7310737
Alignment:
Q  228 atgcctctacgcacgagccggattagtcg 256  Q
    |||||||||||||||||||||||||||||    
T  7310765 atgcctctacgcacgagccggattagtcg 7310737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 10040595 - 10040635
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccacc 262  Q
    ||||| |||||||||||||||||||||| | ||||||||||    
T  10040595 gtgcgcatgcctctacgcacgagccggaatggtcgtccacc 10040635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 195
Target Start/End: Original strand, 10043100 - 10043152
Alignment:
Q  143 ttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaata 195  Q
    |||||||||||||  || |||||| |||||| |||||| ||||||||||||||    
T  10043100 ttgtttgggctccactggcaatgagctcctttcaaggacgtatccggggaata 10043152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 184
Target Start/End: Original strand, 10855327 - 10855375
Alignment:
Q  136 aaccaagttgtttgggctccgatgacaatgaactccttccaaggatgta 184  Q
    ||||||||||||||||||||  || ||| || |||||||||||||||||    
T  10855327 aaccaagttgtttgggctccagtggcaaggagctccttccaaggatgta 10855375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 290
Target Start/End: Original strand, 19147004 - 19147068
Alignment:
Q  226 gtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaag 290  Q
    |||| |||||| |||||||| |||||||||||||||| || || ||||| |||||  ||||||||    
T  19147004 gtatccctctatgcacgagctggattagtcgtccacctttggtgggtcggaaaccggtgcgaaag 19147068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 26207863 - 26207811
Alignment:
Q  228 atgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaacc 280  Q
    ||||||||||||| ||||||||||||||| |||  |||||| ||||| |||||    
T  26207863 atgcctctacgcatgagccggattagtcggccattattagtgggtcggaaacc 26207811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 256
Target Start/End: Complemental strand, 26362029 - 26362001
Alignment:
Q  228 atgcctctacgcacgagccggattagtcg 256  Q
    |||||||||||||||||||||||||||||    
T  26362029 atgcctctacgcacgagccggattagtcg 26362001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 199
Target Start/End: Original strand, 31072824 - 31072884
Alignment:
Q  139 caagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaataccag 199  Q
    ||||||||||||||||| ||| ||| || |||||| |||||| ||| |||| |||||||||    
T  31072824 caagttgtttgggctccaatggcaaggagctcctttcaaggacgtacccggagaataccag 31072884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 292
Target Start/End: Complemental strand, 35998633 - 35998569
Alignment:
Q  228 atgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    |||||||||||||||||  |||||| ||||||||| ||||| ||||  |||||  ||||||||||    
T  35998633 atgcctctacgcacgagttggattaatcgtccacctttagtgggtcagaaaccggtgcgaaagcc 35998569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 290
Target Start/End: Original strand, 47471870 - 47471938
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaag 290  Q
    ||||| |||| |||||||| |||||| |||||||||||||| || || ||||| |||||  ||||||||    
T  47471870 gtgcgcatgcttctacgcatgagccgaattagtcgtccacctttggtgggtcggaaaccgatgcgaaag 47471938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 50753403 - 50753351
Alignment:
Q  228 atgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaacc 280  Q
    ||||||||||||||||| |||||||||||| || |||| || ||||| |||||    
T  50753403 atgcctctacgcacgagtcggattagtcgttcatcattggtgggtcggaaacc 50753351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 258
Target Start/End: Complemental strand, 52364891 - 52364832
Alignment:
Q  196 ccagagggaacaacgcttgactagtggtgcgtatgcctctacgcacgagccggattagtcgtc 258  Q
    ||||| ||||||||||||||| ||||   || |||||||||||||||||| |||||| |||||    
T  52364891 ccagaaggaacaacgcttgaccagtg---cgcatgcctctacgcacgagctggattaatcgtc 52364832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 196
Target Start/End: Complemental strand, 55069843 - 55069783
Alignment:
Q  136 aaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatac 196  Q
    ||||||||||||||||||||  ||||||||| ||| || |||||| |||| | ||||||||    
T  55069843 aaccaagttgtttgggctccagtgacaatgagctcttttcaaggacgtattcagggaatac 55069783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 228 - 292
Target Start/End: Complemental strand, 6606158 - 6606094
Alignment:
Q  228 atgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    ||||||||||||| |||||||||||||||||||||||| || ||||| |||||  ||||||||||    
T  6606158 atgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagcc 6606094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 228 - 292
Target Start/End: Complemental strand, 14783481 - 14783417
Alignment:
Q  228 atgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    ||||||||||||| |||||||||||||||||||||||| || ||||| |||||  ||||||||||    
T  14783481 atgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagcc 14783417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 222 - 292
Target Start/End: Complemental strand, 9633692 - 9633622
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    ||||| ||||||||||||||||||||||||||||| ||||| || || ||||| |||||  ||||||||||    
T  9633692 gtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaagcc 9633622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 222 - 292
Target Start/End: Original strand, 21898691 - 21898761
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    ||||| ||||||||||||| |||||||||||||||| |||| ||||| ||||| |||||  ||||||||||    
T  21898691 gtgcgcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccggtgcgaaagcc 21898761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 228 - 292
Target Start/End: Original strand, 19089547 - 19089611
Alignment:
Q  228 atgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    ||||||||||||||||||||||||||||||| ||| || || ||||| |||||  ||||||||||    
T  19089547 atgcctctacgcacgagccggattagtcgtctacctttggtgggtcggaaaccggtgcgaaagcc 19089611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 136 - 199
Target Start/End: Original strand, 13468880 - 13468943
Alignment:
Q  136 aaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaataccag 199  Q
    |||||||||| |||||||| | || ||| || ||||||||||||| ||||||||||||||||||    
T  13468880 aaccaagttgcttgggctctggtggcaaggagctccttccaaggacgtatccggggaataccag 13468943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 200
Target Start/End: Original strand, 12606375 - 12606441
Alignment:
Q  134 taaaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaataccaga 200  Q
    |||||||| ||| |||||||| | || |||||| ||||||||||| | |||||||||||||||||||    
T  12606375 taaaccaaattgcttgggctctgctggcaatgagctccttccaagaacgtatccggggaataccaga 12606441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 292
Target Start/End: Original strand, 12635857 - 12635927
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    ||||| |||||||||||||| |||||||||||||| |||| ||| || ||||| |||||  ||||||||||    
T  12635857 gtgcgcatgcctctacgcacaagccggattagtcgcccactattggtgggtcggaaaccggtgcgaaagcc 12635927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 292
Target Start/End: Complemental strand, 30788920 - 30788850
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    ||||| ||||||||| ||||||||||||||||||| ||||| || || ||||| |||||  ||||||||||    
T  30788920 gtgcgcatgcctctaggcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaagcc 30788850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 291
Target Start/End: Original strand, 3601127 - 3601196
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagc 291  Q
    ||||| |||||| ||| |||||||||||||||||||||||| || || ||||| |||||  |||||||||    
T  3601127 gtgcgcatgcctatacacacgagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaagc 3601196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 197
Target Start/End: Complemental strand, 5253386 - 5253325
Alignment:
Q  136 aaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    |||||||||| ||||||||| ||| ||| || ||||||||||||| ||| ||||||||||||    
T  5253386 aaccaagttgcttgggctccaatggcaaggagctccttccaaggacgtacccggggaatacc 5253325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 291
Target Start/End: Complemental strand, 13036071 - 13036002
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagc 291  Q
    ||||| ||||||||||||| ||||| |||||||||||||| ||| || ||||| |||||  |||||||||    
T  13036071 gtgcgcatgcctctacgcatgagccagattagtcgtccactattggtgggtcggaaaccggtgcgaaagc 13036002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 197
Target Start/End: Original strand, 21898595 - 21898656
Alignment:
Q  136 aaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    |||||||||| |||||||||  || ||| || ||||||||||||| ||||||||||||||||    
T  21898595 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaatacc 21898656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 262
Target Start/End: Complemental strand, 2271370 - 2271330
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccacc 262  Q
    ||||| ||| |||||||||||||||||||||||||||||||    
T  2271370 gtgcgcatgtctctacgcacgagccggattagtcgtccacc 2271330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 196
Target Start/End: Original strand, 8938658 - 8938718
Alignment:
Q  136 aaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatac 196  Q
    ||||||||||||||||||||  |||||| || |||||||||| ||  ||||||||||||||    
T  8938658 aaccaagttgtttgggctccagtgacaaggagctccttccaaagacatatccggggaatac 8938718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 12606473 - 12606513
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccacc 262  Q
    ||||| ||||||||||||||||||||||||||||| |||||    
T  12606473 gtgcgcatgcctctacgcacgagccggattagtcgcccacc 12606513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 292
Target Start/End: Original strand, 13468982 - 13469046
Alignment:
Q  228 atgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    ||||||||||||||||||| ||||||||| |||||||| || ||| | |||||  ||||||||||    
T  13468982 atgcctctacgcacgagccagattagtcgcccaccattggtgggttggaaaccggtgcgaaagcc 13469046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 292
Target Start/End: Complemental strand, 14107419 - 14107355
Alignment:
Q  228 atgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    ||||||||||||| ||||||||||||||| |||  |||||| ||||| |||||  ||||||||||    
T  14107419 atgcctctacgcatgagccggattagtcgcccattattagtgggtcggaaaccggtgcgaaagcc 14107355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 197
Target Start/End: Complemental strand, 8612139 - 8612076
Alignment:
Q  134 taaaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    ||||||||||||||||| ||||  || ||| || ||||||||||||| ||| ||||||||||||    
T  8612139 taaaccaagttgtttggactccagtggcaaggagctccttccaaggacgtacccggggaatacc 8612076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 197
Target Start/End: Complemental strand, 14107523 - 14107460
Alignment:
Q  134 taaaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    ||||||||||||||||||||||  || ||| || |||||||||| || |||| |||||||||||    
T  14107523 taaaccaagttgtttgggctccagtggcaaggagctccttccaaagacgtattcggggaatacc 14107460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 2271465 - 2271403
Alignment:
Q  135 aaaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    ||||||||||| |||||||||  || ||| || ||||||||||||| |||| |||||||||||    
T  2271465 aaaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtattcggggaatacc 2271403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 288
Target Start/End: Original strand, 4596184 - 4596230
Alignment:
Q  242 gagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaa 288  Q
    ||||||||||||||||||||||||||| ||| | |||||| ||||||    
T  4596184 gagccggattagtcgtccaccattagtgggttggaaaccagtgcgaa 4596230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 13391329 - 13391387
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaacc 280  Q
    ||||| ||||||||||||||||||||||||||||| |||   ||| | |||||||||||    
T  13391329 gtgcgcatgcctctacgcacgagccggattagtcgcccatatttaatgggtcgaaaacc 13391387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 292
Target Start/End: Complemental strand, 29444832 - 29444762
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    ||||| ||||||||||||| ||||||||||||| ||||| | || || ||||| |||| | ||||||||||    
T  29444832 gtgcgcatgcctctacgcatgagccggattagttgtccatctttggtgggtcggaaactagtgcgaaagcc 29444762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 291
Target Start/End: Complemental strand, 5253290 - 5253221
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagc 291  Q
    ||||| ||||||||||||| ||||||||||| ||| ||||| || || ||||| |||||  |||||||||    
T  5253290 gtgcgcatgcctctacgcatgagccggattaatcgcccacctttggtgggtcggaaaccggtgcgaaagc 5253221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 195
Target Start/End: Original strand, 5759573 - 5759634
Alignment:
Q  134 taaaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaata 195  Q
    |||||||||||| |||||||||  || ||| |||||||||||||||| ||| ||| ||||||    
T  5759573 taaaccaagttgcttgggctccagtggcaaggaactccttccaaggacgtacccgaggaata 5759634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 257
Target Start/End: Complemental strand, 19230620 - 19230591
Alignment:
Q  228 atgcctctacgcacgagccggattagtcgt 257  Q
    ||||||||||||||||||||||||||||||    
T  19230620 atgcctctacgcacgagccggattagtcgt 19230591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 197
Target Start/End: Complemental strand, 29333301 - 29333240
Alignment:
Q  136 aaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    |||||||||||||||||||   || |||||| ||||||||||||| ||| || |||||||||    
T  29333301 aaccaagttgtttgggctctagtggcaatgagctccttccaaggacgtacccagggaatacc 29333240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 260
Target Start/End: Original strand, 33940055 - 33940092
Alignment:
Q  223 tgcgtatgcctctacgcacgagccggattagtcgtcca 260  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  33940055 tgcgcatgcctctacacacgagccggattagtcgtcca 33940092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 290
Target Start/End: Complemental strand, 9366490 - 9366423
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaag 290  Q
    ||||| |||||||||||||||||||||||||| || ||||| || ||||||  ||||||  ||||||||    
T  9366490 gtgcgcatgcctctacgcacgagccggattagacg-ccacctttggtaggttaaaaaccgatgcgaaag 9366423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 259
Target Start/End: Complemental strand, 24671956 - 24671896
Alignment:
Q  196 ccagagggaacaacgcttgactagtggtgcgtatgcctctacgcacgagccggattagtcgtcc 259  Q
    |||||||||||||| |||||| |||| |||  |||||||||||||| |||||||||||| ||||    
T  24671956 ccagagggaacaacacttgaccagtg-tgc--atgcctctacgcacaagccggattagtagtcc 24671896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 274
Target Start/End: Complemental strand, 29333206 - 29333154
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcg 274  Q
    ||||| ||||||||||||| |||||| || ||||||||||| || ||||||||    
T  29333206 gtgcgcatgcctctacgcatgagccgaatcagtcgtccacctttggtaggtcg 29333154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 291
Target Start/End: Complemental strand, 34954677 - 34954617
Alignment:
Q  231 cctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagc 291  Q
    |||||||||| ||||| ||||||||||||||| ||  | ||||| |||||| |||||||||    
T  34954677 cctctacgcatgagccagattagtcgtccacctttgatgggtcggaaaccaatgcgaaagc 34954617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 221 - 280
Target Start/End: Original strand, 68555 - 68614
Alignment:
Q  221 ggtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaacc 280  Q
    |||||| ||||||||||||||||||||||||||||| ||||| || || |||||||||||    
T  68555 ggtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcgaaaacc 68614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 196 - 292
Target Start/End: Complemental strand, 155801 - 155708
Alignment:
Q  196 ccagagggaacaacgcttgactagtggtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagcc 292  Q
    |||| |||||||||||||| ||||||   || ||||||||||||||||||||||||||||| ||||| || || ||||| || ||  ||||||||||    
T  155801 ccagggggaacaacgcttggctagtg---cgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaagccggtgcgaaagcc 155708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 37; Significance: 0.000000000009; HSPs: 2)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 9887 - 9927
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccacc 262  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  9887 gtgcgcatgcctctacgcacgagccggattagtcgtccacc 9927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 134 - 197
Target Start/End: Original strand, 9789 - 9852
Alignment:
Q  134 taaaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    ||||||||||||||| | ||||  |||||| || ||||||||||||||||||| | ||||||||    
T  9789 taaaccaagttgttttgactccagtgacaaggagctccttccaaggatgtatctgaggaatacc 9852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 196 - 290
Target Start/End: Original strand, 26202 - 26293
Alignment:
Q  196 ccagagggaacaacgcttgactagtggtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaag 290  Q
    |||| |||||||||||||| | |||| |||  |||||||||||||||||||||||||||||||||| |||  |  |||| |||||| ||||||||    
T  26202 ccagggggaacaacgcttggccagtg-tgc--atgcctctacgcacgagccggattagtcgtccacaattgatgagtcggaaaccagtgcgaaag 26293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 186565 - 186617
Alignment:
Q  228 atgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaacc 280  Q
    |||||||||||||||||||||||||||||| || | ||||| ||||| |||||    
T  186565 atgcctctacgcacgagccggattagtcgttcatctttagtgggtcggaaacc 186617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 231 - 290
Target Start/End: Original strand, 224368 - 224427
Alignment:
Q  231 cctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaag 290  Q
    |||||||||||||||||||||||||||||| | || || ||||| |||||  ||||||||    
T  224368 cctctacgcacgagccggattagtcgtccatctttggtgggtcggaaaccggtgcgaaag 224427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 256
Target Start/End: Complemental strand, 250092 - 250058
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcg 256  Q
    ||||| |||||||||||||||||||||||||||||    
T  250092 gtgcgcatgcctctacgcacgagccggattagtcg 250058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 219411 - 219451
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccacc 262  Q
    ||||| |||||||||||||||| | ||||||||||||||||    
T  219411 gtgcgcatgcctctacgcacgaactggattagtcgtccacc 219451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 291
Target Start/End: Complemental strand, 1681 - 1612
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagc 291  Q
    ||||| ||||||||||||| |||||  |||||||| ||||| || || |||||||||||  |||||||||    
T  1681 gtgcgcatgcctctacgcatgagccaaattagtcgcccacctttggtgggtcgaaaaccggtgcgaaagc 1612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 291
Target Start/End: Original strand, 6897 - 6966
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaagc 291  Q
    ||||| ||||||||||||| |||||||||||||||  |||| || || ||||| |||||  |||||||||    
T  6897 gtgcgcatgcctctacgcatgagccggattagtcgctcacctttggtgggtcggaaaccggtgcgaaagc 6966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 95136 - 95079
Alignment:
Q  142 gttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaataccag 199  Q
    |||| ||||||||| ||| ||| || ||||||||||| | ||||||||||||||||||    
T  95136 gttgcttgggctccaatggcaaggagctccttccaagaaagtatccggggaataccag 95079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 197
Target Start/End: Complemental strand, 412189 - 412128
Alignment:
Q  136 aaccaagttgtttgggctccgatgacaatgaactccttccaaggatgtatccggggaatacc 197  Q
    |||||||||| ||||||| |  || | |||| ||||||||||||| ||||||||||||||||    
T  412189 aaccaagttgcttgggcttcagtggcgatgagctccttccaaggacgtatccggggaatacc 412128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 6020 - 6072
Alignment:
Q  228 atgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaacc 280  Q
    ||||||||||||| ||| || ||||||||||||||||| || ||||| |||||    
T  6020 atgcctctacgcatgagacgaattagtcgtccaccattggtgggtcggaaacc 6072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 262
Target Start/End: Original strand, 12596 - 12655
Alignment:
Q  200 agggaacaacgcttgactagtggtgcgtatgcctctacgcacgagccggattagtcgtccacc 262  Q
    ||||||||||||||||| ||||   || ||||||||||||| ||| ||||||||||| |||||    
T  12596 agggaacaacgcttgaccagtg---cgcatgcctctacgcatgagtcggattagtcgcccacc 12655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 256
Target Start/End: Original strand, 41092 - 41120
Alignment:
Q  228 atgcctctacgcacgagccggattagtcg 256  Q
    |||||||||||||||||||||||||||||    
T  41092 atgcctctacgcacgagccggattagtcg 41120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 290
Target Start/End: Complemental strand, 42899 - 42831
Alignment:
Q  222 gtgcgtatgcctctacgcacgagccggattagtcgtccaccattagtaggtcgaaaaccactgcgaaag 290  Q
    ||||| |||||||||| || ||||||||||||||| ||||| || || ||||| |||||  ||||||||    
T  42899 gtgcgcatgcctctacacatgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaag 42831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University