View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19379_low_65 (Length: 302)
Name: NF19379_low_65
Description: NF19379
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19379_low_65 |
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Alignment Details
Target: chr7 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 15 - 286
Target Start/End: Complemental strand, 10215371 - 10215099
Alignment:
| Q |
15 |
aataaaattaaggagtactcttcttgtattcaattgaa-gatgtcaattcagaaattagtagtagagaatctcaaaaatcaaatcttacgactaacaaat |
113 |
Q |
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| T |
10215371 |
aataaaattaaggagtactcttcttgtattcaattgaaagatgtcaattcagaaattagtagtagagaatctcaaaaatcaaatcttatgactaacaaat |
10215272 |
T |
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| Q |
114 |
agtaatggcagaattagaaataggatctccttatctacctgctctccagcatgcttgtcaactatatcttcatgattttgacaatctggaaccagagaac |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10215271 |
agtaatggcagaattagaaataggatctccttatctacctgctcgccagcatgcttgtcaactatatcttcatgattttgacaatctggaaccagagaac |
10215172 |
T |
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| Q |
214 |
gaatgacctgaaacattataaagcaggaaagtagaggaaaaagtaaagtgtagatataaataaatagtcaaag |
286 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
10215171 |
gaatgacctgaaacattataaagcaggaaagtagaggaaaaagtaaagtgtagatataaataaatagttaaag |
10215099 |
T |
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