View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19379_low_68 (Length: 292)
Name: NF19379_low_68
Description: NF19379
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19379_low_68 |
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| [»] scaffold0058 (1 HSPs) |
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| [»] scaffold0035 (1 HSPs) |
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| [»] scaffold1496 (1 HSPs) |
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| [»] scaffold0171 (1 HSPs) |
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| [»] scaffold0239 (2 HSPs) |
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| [»] scaffold0297 (1 HSPs) |
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| [»] scaffold0504 (1 HSPs) |
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| [»] scaffold0001 (5 HSPs) |
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| [»] scaffold0021 (2 HSPs) |
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| [»] scaffold0003 (1 HSPs) |
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| [»] scaffold0130 (2 HSPs) |
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| [»] scaffold0126 (1 HSPs) |
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| [»] scaffold0108 (2 HSPs) |
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| [»] scaffold0081 (1 HSPs) |
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| [»] scaffold0060 (1 HSPs) |
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| [»] scaffold0046 (1 HSPs) |
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| [»] scaffold0026 (2 HSPs) |
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| [»] scaffold0023 (5 HSPs) |
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| [»] scaffold0063 (1 HSPs) |
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| [»] scaffold0019 (1 HSPs) |
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| [»] scaffold0770 (1 HSPs) |
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| [»] scaffold0740 (1 HSPs) |
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| [»] scaffold0480 (1 HSPs) |
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| [»] scaffold0358 (1 HSPs) |
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| [»] scaffold0282 (1 HSPs) |
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| [»] scaffold0270 (2 HSPs) |
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| [»] scaffold0241 (1 HSPs) |
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| [»] scaffold0193 (1 HSPs) |
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| [»] scaffold0101 (2 HSPs) |
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| [»] scaffold0080 (1 HSPs) |
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| [»] scaffold0064 (1 HSPs) |
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| [»] scaffold0029 (1 HSPs) |
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| [»] scaffold0022 (1 HSPs) |
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| [»] scaffold0168 (1 HSPs) |
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| [»] scaffold0059 (2 HSPs) |
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| [»] scaffold0016 (1 HSPs) |
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| [»] scaffold0013 (1 HSPs) |
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| [»] scaffold0151 (1 HSPs) |
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| [»] scaffold0509 (2 HSPs) |
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| [»] scaffold0304 (1 HSPs) |
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| [»] scaffold0190 (1 HSPs) |
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| [»] scaffold0216 (1 HSPs) |
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| [»] scaffold0077 (1 HSPs) |
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| [»] scaffold0053 (1 HSPs) |
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| [»] scaffold0040 (1 HSPs) |
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| [»] scaffold0005 (1 HSPs) |
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| [»] scaffold0100 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 232; Significance: 1e-128; HSPs: 17)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 19 - 281
Target Start/End: Original strand, 10478212 - 10478475
Alignment:
| Q |
19 |
attcatacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgaga |
118 |
Q |
| |
|
||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10478212 |
attcatacattttgacttgtaactcgtttctctctaaatgtggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgaga |
10478311 |
T |
 |
| Q |
119 |
aacttctattaatactagaaaaactacctacacatagaaatttgatactataactgctaataatggttacgaacacctcttcgatttgaaattcaaatgg |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10478312 |
aacttctattaatactagaaaaactacctacacatagaaatgtgatactataactgttaacaatggttacgaacacctcttcgatttgaaattcaaatgg |
10478411 |
T |
 |
| Q |
219 |
cattcctt-aaagcatctgttaattgtctttatctgaaaccaacttgtacttcgacatcttctt |
281 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10478412 |
cattccttgaaagcatctgttaattgtctttatctgaaaccaacttgtacttcgacatcttctt |
10478475 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 18 - 140
Target Start/End: Complemental strand, 18450895 - 18450773
Alignment:
| Q |
18 |
aattcatacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgag |
117 |
Q |
| |
|
|||||||||||| |||||||| |||||||| | |||||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||| ||| | |
|
|
| T |
18450895 |
aattcatacattatgacttgttactcgtttctctctaaatgcgaatagtttaagtgtaagttttctgtatggttgaattgtgacctgtttttcccatggg |
18450796 |
T |
 |
| Q |
118 |
aaacttctattaatactagaaaa |
140 |
Q |
| |
|
||||| |||| ||||||||||| |
|
|
| T |
18450795 |
aaactaatatttatactagaaaa |
18450773 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 135
Target Start/End: Original strand, 41239245 - 41239360
Alignment:
| Q |
19 |
attcatacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgaga |
118 |
Q |
| |
|
||||||||||| |||||||| |||||||| | ||| ||| ||||||||||||| ||||||||| |||||| |||||||||||||| ||||| |||||| | |
|
|
| T |
41239245 |
attcatacattgtgacttgttactcgtttctctctgaatccggatagtttgagcgtaagttttatgtatgattgaattgtgaccc-ttttttctatgaaa |
41239343 |
T |
 |
| Q |
119 |
aacttctattaatacta |
135 |
Q |
| |
|
|||| |||| |||||| |
|
|
| T |
41239344 |
aactagtatttatacta |
41239360 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 16713294 - 16713383
Alignment:
| Q |
19 |
attcatacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttt |
108 |
Q |
| |
|
|||||||||| |||||| | |||||||| | ||| ||||| ||||||||||||||| |||||||||||| |||||||||||||| |||| |
|
|
| T |
16713294 |
attcatacatcgtgacttattactcgtttctctctgaatgcagatagtttgagtgtacgttttctgtatgattgaattgtgacccttttt |
16713383 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 17687530 - 17687619
Alignment:
| Q |
19 |
attcatacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttt |
108 |
Q |
| |
|
|||||||||| |||||| | |||||||| | ||| ||||| ||||||||||||||| |||||||||||| |||||||||||||| |||| |
|
|
| T |
17687530 |
attcatacatcgtgacttattactcgtttctctctgaatgcagatagtttgagtgtacgttttctgtatgattgaattgtgacccttttt |
17687619 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 18174933 - 18174999
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||||||||||| || ||||| ||||| |||| |
|
|
| T |
18174933 |
ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac |
18174999 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 109
Target Start/End: Original strand, 24876425 - 24876478
Alignment:
| Q |
56 |
atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgttttt |
109 |
Q |
| |
|
||||||||| |||||||||||||||| |||||| |||||||||||||| ||||| |
|
|
| T |
24876425 |
atgcggataatttgagtgtaagttttttgtatgattgaattgtgaccctttttt |
24876478 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 59 - 133
Target Start/End: Original strand, 11989458 - 11989533
Alignment:
| Q |
59 |
cggatagt-ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
|||||||| ||||||||||||||| ||||| |||||||||||||| ||||||||| || ||||| ||||| |||| |
|
|
| T |
11989458 |
cggatagtattgagtgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaactactatttatac |
11989533 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 102
Target Start/End: Original strand, 40342912 - 40342958
Alignment:
| Q |
56 |
atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacc |
102 |
Q |
| |
|
||||||||| |||||||||||||||| |||||| ||||||||||||| |
|
|
| T |
40342912 |
atgcggataatttgagtgtaagttttttgtatgattgaattgtgacc |
40342958 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 111
Target Start/End: Original strand, 10827855 - 10827910
Alignment:
| Q |
56 |
atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcc |
111 |
Q |
| |
|
||||||||| |||||||||||||||| |||||| ||| | |||||||| ||||||| |
|
|
| T |
10827855 |
atgcggataatttgagtgtaagttttgtgtatgattggactgtgacccttttttcc |
10827910 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 111
Target Start/End: Original strand, 11021647 - 11021702
Alignment:
| Q |
56 |
atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcc |
111 |
Q |
| |
|
||||||||| |||||||||||||||| |||||| ||| | |||||||| ||||||| |
|
|
| T |
11021647 |
atgcggataatttgagtgtaagttttgtgtatgattggactgtgacccttttttcc |
11021702 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 1978290 - 1978356
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
|||||||||| |||| ||||| ||||||||||||||||||| |||| || ||||| ||||| |||| |
|
|
| T |
1978290 |
ttgagtgtaaattttgagtatgattgaattgtgacccgttttccctaagaaaaactactatttatac |
1978356 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 14035939 - 14036005
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| |||| ||||||||| ||||||||| || ||||| ||||| |||| |
|
|
| T |
14035939 |
ttgagtgtaagtttttagtatgattgagttgtgacccttttttcctaagaaaaactactatttatac |
14036005 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 14345969 - 14346035
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| |||| ||||||||| ||||||||| || ||||| ||||| |||| |
|
|
| T |
14345969 |
ttgagtgtaagtttttagtatgattgagttgtgacccttttttcctaagaaaaactactatttatac |
14346035 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 15758624 - 15758558
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||| ||||||||| || ||||| ||||| |||| |
|
|
| T |
15758624 |
ttgagtgtaagttttgagtatgattgaattgtgacctctttttcctaagaaaaactactatttatac |
15758558 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 18115295 - 18115360
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||| ||||||||| || ||||| ||||| |||| |
|
|
| T |
18115295 |
ttgagtgtaagtttta-gtatgattgaattgtgacccttttttcctaagaaaaactactatttatac |
18115360 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 18141863 - 18141928
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||| ||||||||| || ||||| ||||| |||| |
|
|
| T |
18141863 |
ttgagtgtaagtttta-gtatgattgaattgtgacccttttttcctaagaaaaactactatttatac |
18141928 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 112; Significance: 1e-56; HSPs: 17)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 23 - 279
Target Start/End: Complemental strand, 13101935 - 13101679
Alignment:
| Q |
23 |
atacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaact |
122 |
Q |
| |
|
|||||||| |||||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
13101935 |
atacatttcgacttgtaactcgtttctctctaaatgcggatagtttgagtgtatgttttctgtatggttgaactgtgacccgtttttcctatgagaaact |
13101836 |
T |
 |
| Q |
123 |
tctattaatactagaaaaactacctacacatagaaatttgatactataactgctaataatggttacga-acacctcttcgatttgaaattcaaatggcat |
221 |
Q |
| |
|
||||| ||||||| ||||||||||||||||||| |||||| ||||||||||||| || || | ||| |||||||||||||||||| ||| || |||| |
|
|
| T |
13101835 |
gctatttatactag-aaaactacctacacatagacatttgaaactataactgctacgaacgg-tccgagacacctcttcgatttgaatttcgaa-agcat |
13101739 |
T |
 |
| Q |
222 |
tcctt-aaagcatctgttaattg-tctttatctgaaaccaacttgtacttcgacatcttc |
279 |
Q |
| |
|
| || | || ||| |||| ||| ||||||||||||| ||||||| ||||||||||||| |
|
|
| T |
13101738 |
cctttgatagtatccgttatttgaactttatctgaaactaacttgttcttcgacatcttc |
13101679 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 18 - 229
Target Start/End: Original strand, 14345594 - 14345804
Alignment:
| Q |
18 |
aattcatacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgag |
117 |
Q |
| |
|
||||||||||||||||||| |||||||||| | |||||||| |||||||||||| |||||||||||| | ||||||||||||||||||||||||||||| |
|
|
| T |
14345594 |
aattcatacattttgacttataactcgtttctctctaaatgtggatagtttgagcataagttttctgtgtagttgaattgtgacccgtttttcctatgag |
14345693 |
T |
 |
| Q |
118 |
aaacttctattaatactagaaaaactacctacacatagaaatttgatactataactgctaataatggttacgaacacctcttcgatttgaaattcaaatg |
217 |
Q |
| |
|
||| || |||| ||||||| |||||||| |||||||||| ||| || ||||||||||||| ||| || |||| |||||| | ||||||||||||||| |
|
|
| T |
14345694 |
aaatttatatttatactag-aaaactacttacacatagacattagaaactataactgctactaacatctaggaactcctcttggctttgaaattcaaatg |
14345792 |
T |
 |
| Q |
218 |
gcattccttaaa |
229 |
Q |
| |
|
|||||| ||||| |
|
|
| T |
14345793 |
gcattcgttaaa |
14345804 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 19 - 226
Target Start/End: Original strand, 55002384 - 55002590
Alignment:
| Q |
19 |
attcatacattttgacttgtaa-ctcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgag |
117 |
Q |
| |
|
||||||||||| |||||||||| ||| | | | ||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||| || |||| |
|
|
| T |
55002384 |
attcatacattgtgacttgtaaactcatctgtctctaaatgcggatagtttgcgtgtaagttttttgtatgattgaattgtgacccgttttt-ctttgag |
55002482 |
T |
 |
| Q |
118 |
aaacttctattaatactagaaaaactacctacacatagaaatttgatactataactgctaataatggttacgaacacctcttcgatttgaaattcaaatg |
217 |
Q |
| |
|
||||| ||||| ||||||| |||||||| | ||||||||||||||| ||||||||||| | ||| ||| | ||||||||||| | || |||||||||| |
|
|
| T |
55002483 |
aaactgctatttatactag-aaaactacatgcacatagaaatttgaaactataactgccactaaaggtcagaaacacctcttcaacttaaaattcaaata |
55002581 |
T |
 |
| Q |
218 |
gcattcctt |
226 |
Q |
| |
|
|||||||| |
|
|
| T |
55002582 |
acattcctt |
55002590 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 19 - 152
Target Start/End: Complemental strand, 14133416 - 14133285
Alignment:
| Q |
19 |
attcatacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgaga |
118 |
Q |
| |
|
||||||||||| |||||||| |||||||| | ||| |||||||||||||||||| |||||||| | |||| |||||||||||| |||||||| ||||| | |
|
|
| T |
14133416 |
attcatacattgtgacttgttactcgtttctctctgaatgcggatagtttgagtataagtttt-tttatgattgaattgtgactcgtttttcttatgaaa |
14133318 |
T |
 |
| Q |
119 |
aacttctattaatactagaaaaactacctacaca |
152 |
Q |
| |
|
|||| |||| |||||| | ||||||||||||| |
|
|
| T |
14133317 |
aactattatttatacta-agtaactacctacaca |
14133285 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 10139826 - 10139760
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||||||||||| || ||||| ||||| |||| |
|
|
| T |
10139826 |
ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac |
10139760 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 128
Target Start/End: Complemental strand, 10171193 - 10171132
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctatt |
128 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||||||||||| || ||||| ||||| |
|
|
| T |
10171193 |
ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatt |
10171132 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 67 - 135
Target Start/End: Original strand, 1934709 - 1934777
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatacta |
135 |
Q |
| |
|
||||||||||||||| | |||| ||||||||||||| |||||||||||| ||||| ||||| |||||| |
|
|
| T |
1934709 |
ttgagtgtaagttttatatatgattgaattgtgacctatttttcctatgaaaaactactatttatacta |
1934777 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 13299533 - 13299599
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||| ||||||||| || ||||| ||||| |||| |
|
|
| T |
13299533 |
ttgagtgtaagtttttagtatgattgaattgtgacccctttttcctaagaaaaactactatttatac |
13299599 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 13310191 - 13310257
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||| ||||||||| || ||||| ||||| |||| |
|
|
| T |
13310191 |
ttgagtgtaagtttttagtatgattgaattgtgacccctttttcctaagaaaaactactatttatac |
13310257 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 14683217 - 14683283
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||| ||||||||| || ||||| ||||| |||| |
|
|
| T |
14683217 |
ttgagtgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaactactatttatac |
14683283 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 102
Target Start/End: Original strand, 43135641 - 43135687
Alignment:
| Q |
56 |
atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacc |
102 |
Q |
| |
|
||||||||| |||||||||||||||| |||||| ||||||||||||| |
|
|
| T |
43135641 |
atgcggataatttgagtgtaagttttttgtatgattgaattgtgacc |
43135687 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 122
Target Start/End: Complemental strand, 13023940 - 13023884
Alignment:
| Q |
66 |
tttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaact |
122 |
Q |
| |
|
|||||||||||||||| ||||| |||||||||||||| ||||||||| || ||||| |
|
|
| T |
13023940 |
tttgagtgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaact |
13023884 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 113
Target Start/End: Original strand, 132520 - 132567
Alignment:
| Q |
66 |
tttgagtgtaagttttctgtatggttgaattgtgacccgtttttccta |
113 |
Q |
| |
|
|||| ||||||||||| |||||| |||||||||||||| ||||||||| |
|
|
| T |
132520 |
tttgcgtgtaagttttttgtatgattgaattgtgacccttttttccta |
132567 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 133
Target Start/End: Original strand, 12021543 - 12021610
Alignment:
| Q |
66 |
tttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
|||||||||||||||| ||||| ||||||||||||| ||||||||| || ||||| ||||| |||| |
|
|
| T |
12021543 |
tttgagtgtaagtttttagtatgattgaattgtgacctctttttcctaagaaaaactactatttatac |
12021610 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 133
Target Start/End: Complemental strand, 12491979 - 12491916
Alignment:
| Q |
70 |
agtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
|||||||||||| ||||| |||||||||||||| ||||||||| || ||||| ||||| |||| |
|
|
| T |
12491979 |
agtgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaactactatttatac |
12491916 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 128
Target Start/End: Original strand, 12844631 - 12844700
Alignment:
| Q |
59 |
cggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctatt |
128 |
Q |
| |
|
|||| |||||||| ||||||||| ||||| |||||||||||||| |||| |||| || ||||| ||||| |
|
|
| T |
12844631 |
cggacagtttgagcgtaagtttttagtatgattgaattgtgacccattttccctaagaaaaactactatt |
12844700 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 135
Target Start/End: Original strand, 13905960 - 13906040
Alignment:
| Q |
57 |
tgcggatagtttgagtgt--aagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatacta |
135 |
Q |
| |
|
|||||||||||| ||||| ||||||| ||| | |||||||||||||||||||||||||| ||||| |||| |||||| |
|
|
| T |
13905960 |
tgcggatagttttagtgtgtaagttttgtgtgtatgtgaattgtgacccgtttttcctatgaaaaactcttatttatacta |
13906040 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 104; Significance: 7e-52; HSPs: 16)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 18 - 221
Target Start/End: Original strand, 19859599 - 19859801
Alignment:
| Q |
18 |
aattcatacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgag |
117 |
Q |
| |
|
|||||||||||| |||||||||||||||| | | || ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
19859599 |
aattcatacattgggacttgtaactcgtttctctttagatgttgatagtttgagtgtaagttttctgtattgttgaattgtgacccgtttttcctatgag |
19859698 |
T |
 |
| Q |
118 |
aaacttctattaatactagaaaaactacctacacatagaaatttgatactataactgctaataatggttacgaacacctcttcgatttgaaattcaaatg |
217 |
Q |
| |
|
||||| |||| ||||||| ||||||| |||||||| || | | || ||||||||||||| || |||||||||||| ||||||||||||||||||||| |
|
|
| T |
19859699 |
aaactgatatttatactag-aaaactagctacacatggacactcgaaactataactgctaccaacagttacgaacaccacttcgatttgaaattcaaatg |
19859797 |
T |
 |
| Q |
218 |
gcat |
221 |
Q |
| |
|
|||| |
|
|
| T |
19859798 |
gcat |
19859801 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 19 - 260
Target Start/End: Complemental strand, 19212489 - 19212248
Alignment:
| Q |
19 |
attcatacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgaga |
118 |
Q |
| |
|
|||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| | |||| ||||||||||||| ||||||||||||| | |
|
|
| T |
19212489 |
attcgtacattttgatgtgtaactcgtttatctctaaatgcggatagtttgagtgtaagttttttatatgattgaattgtgacctgtttttcctatgaaa |
19212390 |
T |
 |
| Q |
119 |
aacttctattaatactagaaaaactacctacacatagaaatttgatactataactgctaataatggttacgaacacctcttcgatttgaaattcaaatgg |
218 |
Q |
| |
|
|||| |||| || ||| ||||||| ||||||||| | ||| || || |||||||||| ||| || || ||||| | || | ||||||||||||||| |
|
|
| T |
19212389 |
aactgatatttattatag-aaaactaactacacataaacattcgaaacaataactgctactaacggctatgaacatatgttggctttgaaattcaaatga |
19212291 |
T |
 |
| Q |
219 |
cattcctt-aaagcatctgttaattgtctttatctgaaaccaa |
260 |
Q |
| |
|
|||||||| |||||| | |||| ||| ||||||||| |||||| |
|
|
| T |
19212290 |
cattccttcaaagcaaccgttatttggctttatctgtaaccaa |
19212248 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 59 - 133
Target Start/End: Complemental strand, 21530378 - 21530303
Alignment:
| Q |
59 |
cggatagt-ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
|||||||| ||||||||||||||| ||||| |||||||||||||||||||||||| || ||||||||||| |||| |
|
|
| T |
21530378 |
cggatagtattgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaacttctatttatac |
21530303 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 21504702 - 21504636
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||||||||||| || ||||||||||| |||| |
|
|
| T |
21504702 |
ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaacttctatttatac |
21504636 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 26274165 - 26274231
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||||||||||| || ||||||||||| |||| |
|
|
| T |
26274165 |
ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaacttctatttatac |
26274231 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 133
Target Start/End: Original strand, 20024511 - 20024587
Alignment:
| Q |
56 |
atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||| |||||||||||||||| |||||| |||||||||||||| |||| | || |||||||| ||||| |||| |
|
|
| T |
20024511 |
atgcggataatttgagtgtaagtttt-tgtatgattgaattgtgaccctttttccttaagagaaactactatttatac |
20024587 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 20506387 - 20506453
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||| |||||||||| || ||||| ||||| |||| |
|
|
| T |
20506387 |
ttgagtgtaagttttgagtatgattgaattgtgacctgtttttcctaagaaaaactactatttatac |
20506453 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 20249266 - 20249335
Alignment:
| Q |
19 |
attcatacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatg |
88 |
Q |
| |
|
||||||||||| |||||||| || ||||| | ||| |||| ||||||||||||| |||||||| |||||| |
|
|
| T |
20249266 |
attcatacattgtgacttgttacccgtttctctctgaatgtggatagtttgagtataagttttttgtatg |
20249335 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 131
Target Start/End: Complemental strand, 10624381 - 10624306
Alignment:
| Q |
56 |
atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgttttt-cctatgagaaacttctattaat |
131 |
Q |
| |
|
||||||||| |||||||||||||||| |||||| | |||||||||||| ||||| |||| || ||||| |||||||| |
|
|
| T |
10624381 |
atgcggataatttgagtgtaagtttt-tgtatgatagaattgtgacccttttttccctaggaaaaactactattaat |
10624306 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 102
Target Start/End: Complemental strand, 18156220 - 18156174
Alignment:
| Q |
56 |
atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacc |
102 |
Q |
| |
|
||||||||| |||||||||||||||| |||||| ||| ||||||||| |
|
|
| T |
18156220 |
atgcggataatttgagtgtaagttttgtgtatgattggattgtgacc |
18156174 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 23656603 - 23656553
Alignment:
| Q |
58 |
gcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttt |
108 |
Q |
| |
|
|||||| ||||||| |||||||||| ||||||||||||||||||| |||| |
|
|
| T |
23656603 |
gcggattgtttgagcgtaagttttcactatggttgaattgtgacccatttt |
23656553 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 23801967 - 23802017
Alignment:
| Q |
58 |
gcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttt |
108 |
Q |
| |
|
|||||| ||||||| |||||||||| ||||||||||||||||||| |||| |
|
|
| T |
23801967 |
gcggattgtttgagcgtaagttttcactatggttgaattgtgacccatttt |
23802017 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 16832186 - 16832141
Alignment:
| Q |
55 |
aatgcggatagtttgagtgtaagttttctgtatggttgaattgtga |
100 |
Q |
| |
|
|||||||||| |||||||||||||||| |||||| ||| ||||||| |
|
|
| T |
16832186 |
aatgcggataatttgagtgtaagttttgtgtatgattggattgtga |
16832141 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 128
Target Start/End: Original strand, 21982681 - 21982742
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctatt |
128 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||| ||||||||| || ||||| ||||| |
|
|
| T |
21982681 |
ttgagtgtaagtttttagtatgattgaattgtgacctatttttcctaagaaaaactactatt |
21982742 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 135
Target Start/End: Original strand, 17432676 - 17432795
Alignment:
| Q |
19 |
attcatacattt-tgacttgtaactcgtttatatctaaatgcggatagtttgagtgt--aagttttctgtatggttgaattgtgacccgtttttcctatg |
115 |
Q |
| |
|
|||||||||||| | |||||| |||||||| | | ||||| |||||||||||||| ||||||| ||| || ||||||||||| |||||||| |||| |
|
|
| T |
17432676 |
attcatacatttgttacttgttactcgtttctccttgaatgcagatagtttgagtgtgtaagttttgtgtgtgattgaattgtgaaccgtttttaatatg |
17432775 |
T |
 |
| Q |
116 |
agaaacttctattaatacta |
135 |
Q |
| |
|
| ||||| |||| |||||| |
|
|
| T |
17432776 |
aaaaactattatttatacta |
17432795 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 19749875 - 19749823
Alignment:
| Q |
169 |
taactgctaataatggttacgaacacctcttcgatttgaaattcaaatggcat |
221 |
Q |
| |
|
||||||||| |||||| || ||||||||||| ||||||||||||||| |||| |
|
|
| T |
19749875 |
taactgctactaatggctataaacacctcttcaatttgaaattcaaatagcat |
19749823 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 85; Significance: 2e-40; HSPs: 21)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 22698752 - 22698907
Alignment:
| Q |
19 |
attcatacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgaga |
118 |
Q |
| |
|
||||||||||||||| ||||||||| ||| | |||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
22698752 |
attcatacattttgatttgtaactcatttctctctacatgcggataatttgagtgtaagttttctgtatggttgaattgtgacccttttttcctatgaga |
22698851 |
T |
 |
| Q |
119 |
aacttctattaatactagaaaaactacctacacatagaaatttgatactataactgc |
175 |
Q |
| |
|
|||| |||| |||||| ||||||||||| ||||||| ||| || || |||||||| |
|
|
| T |
22698852 |
aactgttatttatacta-caaaactacctatacatagacattcgaaaccataactgc |
22698907 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 18846863 - 18846665
Alignment:
| Q |
19 |
attcatacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgaga |
118 |
Q |
| |
|
||||||||||| |||||||| |||||||| | |||| || |||||||||| ||||||||||||||||||||||||||| | || ||||||| |||||||| |
|
|
| T |
18846863 |
attcatacattctgacttgttactcgtttctctctagatacggatagtttaagtgtaagttttctgtatggttgaattataactcgttttt-ctatgaga |
18846765 |
T |
 |
| Q |
119 |
aacttctattaatactagaaaaactacctacacatagaaatttgatactataactgctaataatggttacgaacacctcttcgatttgaaattcaaatgg |
218 |
Q |
| |
|
|||| |||| ||| ||| ||||||||||||| | ||| ||| || || ||||||||| ||| || || |||||||||||||||||| || |||| | |
|
|
| T |
18846764 |
aactaatatttataatag-aaaactacctacatagagacattcgaaac--taactgctattaacggctatagacacctcttcgatttgaattttaaatag |
18846668 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 17840057 - 17840212
Alignment:
| Q |
19 |
attcatacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgaga |
118 |
Q |
| |
|
||||||||||| ||||| |||||||||| | |||| ||| ||||||||| ||||| | |||||| |||| || |||||||||| ||||| |||||| | |
|
|
| T |
17840057 |
attcatacattgtgactgataactcgtttctctctagatgtggatagtttaagtgtgaattttctatatgaatgtattgtgaccctttttttctatgaaa |
17840156 |
T |
 |
| Q |
119 |
aacttctattaatactagaaaaactacctacacatagaaatttgatactataactgc |
175 |
Q |
| |
|
|| | |||| |||||| ||||||||||| |||||||| |||||| ||||||||||| |
|
|
| T |
17840157 |
aattgttatttatacta-aaaaactacctgcacatagacatttgaaactataactgc |
17840212 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 16778017 - 16777929
Alignment:
| Q |
63 |
tagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatactagaaaaactacctacaca |
152 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| |||| |||||| | ||||||||||||| |
|
|
| T |
16778017 |
tagtttgagtgtaagttttctgtatgattgaattgtgatccgtttttcctatgaaaaactattatttatacta-agtaactacctacaca |
16777929 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 138
Target Start/End: Complemental strand, 15911826 - 15911707
Alignment:
| Q |
20 |
ttcatacattttgacttgtaactcgtttatatcta-aatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgaga |
118 |
Q |
| |
|
|||||||||| | |||||| |||||||| | ||| ||||||||||||||||||||||||||| |||||| ||| |||||||| |||| | ||||| | |
|
|
| T |
15911826 |
ttcatacattgtaacttgtgactcgtttctctcttgaatgcggatagtttgagtgtaagttttgtgtatgattggtttgtgacctattttccttatgaaa |
15911727 |
T |
 |
| Q |
119 |
aacttctattaatactagaa |
138 |
Q |
| |
|
|||| ||||| ||||||||| |
|
|
| T |
15911726 |
aactactatttatactagaa |
15911707 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 56 - 133
Target Start/End: Complemental strand, 18735446 - 18735370
Alignment:
| Q |
56 |
atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||| |||||||||||||||| |||||| |||||||||||||| |||||| || |||||||| ||||| |||| |
|
|
| T |
18735446 |
atgcggataatttgagtgtaagtttt-tgtatgattgaattgtgacccttttttcttaagagaaactactatttatac |
18735370 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 17637891 - 17637949
Alignment:
| Q |
19 |
attcatacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaag |
77 |
Q |
| |
|
||||||||||| |||||||| |||||||| | ||| ||||||||||||||||||||||| |
|
|
| T |
17637891 |
attcatacattgtgacttgttactcgtttctctctgaatgcggatagtttgagtgtaag |
17637949 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 22352085 - 22352151
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||||||||||| || ||||| ||||| |||| |
|
|
| T |
22352085 |
ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac |
22352151 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 22698159 - 22698216
Alignment:
| Q |
56 |
atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttccta |
113 |
Q |
| |
|
||||||||| |||||||||||||||| |||||| | |||||||||||| ||||||||| |
|
|
| T |
22698159 |
atgcggataatttgagtgtaagttttttgtatgatagaattgtgacccttttttccta |
22698216 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 133
Target Start/End: Original strand, 29708237 - 29708304
Alignment:
| Q |
66 |
tttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
|||||| ||||||||| ||||| |||||||||||||||||||||||| || ||||| ||||| |||| |
|
|
| T |
29708237 |
tttgagcgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac |
29708304 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 17426168 - 17426234
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||| ||||||||| || ||||| ||||| |||| |
|
|
| T |
17426168 |
ttgagtgtaagtttttagtatgattgaattgtgacccatttttcctaagaaaaactactatttatac |
17426234 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 133
Target Start/End: Original strand, 41438908 - 41438982
Alignment:
| Q |
59 |
cggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
|||||| |||||| ||||||||| ||||| |||||||||||||| ||||||||| || ||||| ||||| |||| |
|
|
| T |
41438908 |
cggatattttgagcgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaactactatttatac |
41438982 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 135
Target Start/End: Complemental strand, 23237266 - 23237186
Alignment:
| Q |
57 |
tgcggatagtttgagtgt--aagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatacta |
135 |
Q |
| |
|
|||||||||||||||||| ||||||| ||| | ||||||||||||||||||||| ||||| ||||| |||| |||||| |
|
|
| T |
23237266 |
tgcggatagtttgagtgtgtaagttttgtgtgtatttgaattgtgacccgtttttcatatgaaaaactcttatttatacta |
23237186 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 133
Target Start/End: Complemental strand, 22064649 - 22064586
Alignment:
| Q |
70 |
agtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
|||||||||||| ||||| |||||||||||||| ||||||||| || ||||| ||||| |||| |
|
|
| T |
22064649 |
agtgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaactactatttatac |
22064586 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 16668026 - 16668092
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||| ||||||||| || ||||| ||||| |||| |
|
|
| T |
16668026 |
ttgagtgtaagtttttagtatgattgaattgtgaccactttttcctaagaaaaactactatttatac |
16668092 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 108
Target Start/End: Original strand, 22456380 - 22456433
Alignment:
| Q |
57 |
tgcggatagtttgagtgt--aagttttctgtatggttgaattgtgacccgtttt |
108 |
Q |
| |
|
|||||||||||||||||| ||| |||| ||||| ||||||||||||||||||| |
|
|
| T |
22456380 |
tgcggatagtttgagtgtttaagctttcggtatgtttgaattgtgacccgtttt |
22456433 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 25389054 - 25389120
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||| ||||||||| || ||||| ||||| |||| |
|
|
| T |
25389054 |
ttgagtgtaagttttgagtatgattgaattgtgaccaatttttcctaagaaaaactactatttatac |
25389120 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 116
Target Start/End: Original strand, 13764589 - 13764634
Alignment:
| Q |
71 |
gtgtaagttttctgtatggttgaattgtgacccgtttttcctatga |
116 |
Q |
| |
|
||||||||||| ||| | ||||||||||||||||||||||||||| |
|
|
| T |
13764589 |
gtgtaagttttgtgtgtaattgaattgtgacccgtttttcctatga |
13764634 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 100
Target Start/End: Complemental strand, 15337388 - 15337344
Alignment:
| Q |
56 |
atgcggatagtttgagtgtaagttttctgtatggttgaattgtga |
100 |
Q |
| |
|
||||||||| |||||||||||||||| |||||| | ||||||||| |
|
|
| T |
15337388 |
atgcggataatttgagtgtaagttttttgtatgatagaattgtga |
15337344 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 100
Target Start/End: Complemental strand, 15426453 - 15426409
Alignment:
| Q |
56 |
atgcggatagtttgagtgtaagttttctgtatggttgaattgtga |
100 |
Q |
| |
|
||||||||| |||||||||||||||| |||||| | ||||||||| |
|
|
| T |
15426453 |
atgcggataatttgagtgtaagttttttgtatgatagaattgtga |
15426409 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 100
Target Start/End: Complemental strand, 15517757 - 15517713
Alignment:
| Q |
56 |
atgcggatagtttgagtgtaagttttctgtatggttgaattgtga |
100 |
Q |
| |
|
||||||||| |||||||||||||||| |||||| | ||||||||| |
|
|
| T |
15517757 |
atgcggataatttgagtgtaagttttttgtatgatagaattgtga |
15517713 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0058 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0058
Description:
Target: scaffold0058; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 18 - 202
Target Start/End: Original strand, 15048 - 15233
Alignment:
| Q |
18 |
aattcatacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcc-tatga |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||| ||||||||||||| |||||||||||| ||| |||||||||||||||| |||||||| ||||| |
|
|
| T |
15048 |
aattcatacattttgacttgtaactcgtttatctctagatgcggatagttttagtgtaagttttttgtctggttgaattgtgacctgtttttccttatga |
15147 |
T |
 |
| Q |
117 |
gaaactt-ctattaatactagaaaaactacctacacatagaaatttgatactataactgctaataatggttacgaacacctcttcga |
202 |
Q |
| |
|
|||| || |||| ||||||| |||||||| |||||||| | ||| || | ||||||| ||| || |||||||| ||||||||||| |
|
|
| T |
15148 |
gaaaattgatatttatactag-aaaactacatacacataaacattcgaaaatataactactaccaacggttacgagcacctcttcga |
15233 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 79; Significance: 6e-37; HSPs: 18)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 19 - 278
Target Start/End: Complemental strand, 18530659 - 18530398
Alignment:
| Q |
19 |
attcatacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgaga |
118 |
Q |
| |
|
||||||| |||||||||||||| || ||| | |||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||| | |
|
|
| T |
18530659 |
attcatatattttgacttgtaaatcatttttttctagatgcggatagtttgagtgtaagttttttgtatggttgaattgtgacttgtttttccaatgtaa |
18530560 |
T |
 |
| Q |
119 |
aacttctattaatactagaaaaactacctacacatagaaattt-gatactataactgctaataatggttacgaacacctcttcgatttgaaattcaaatg |
217 |
Q |
| |
|
|||| ||||| |||||||||||||||||| | | ||| |||| || |||| |||| | | ||| ||| | |||||||||||||||||||||||||| |
|
|
| T |
18530559 |
aactgctatttatactagaaaaactacctttatagagatatttcgaaactacaactaccattaacggtgagaaacacctcttcgatttgaaattcaaa-a |
18530461 |
T |
 |
| Q |
218 |
gcattcctt-aaagcatctgttaattgtct-ttatctgaaaccaacttgtacttcgacatctt |
278 |
Q |
| |
|
||||||||| | || || ||||| ||| || |||||||||||||| | | |||||||||||| |
|
|
| T |
18530460 |
gcattccttgatagtatatgttacttgactcttatctgaaaccaatctttccttcgacatctt |
18530398 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 152
Target Start/End: Complemental strand, 21550636 - 21550504
Alignment:
| Q |
19 |
attcatacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgaga |
118 |
Q |
| |
|
||||||||||| |||||||| |||||||| | ||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| | |
|
|
| T |
21550636 |
attcatacattgtgacttgttactcgtttctctctgaatgcggatagtttgagtgtaagttttctgtatgattgaattgtgatccgtttttcctatgaaa |
21550537 |
T |
 |
| Q |
119 |
aacttctattaatactagaaaaactacctacaca |
152 |
Q |
| |
|
|||| ||||| |||||| | ||||||||||||| |
|
|
| T |
21550536 |
aactactatttatacta-agtaactacctacaca |
21550504 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 59 - 133
Target Start/End: Complemental strand, 23511683 - 23511609
Alignment:
| Q |
59 |
cggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||| ||||||||| ||||| |||||||||||||||||||||||| || ||||| ||||| |||| |
|
|
| T |
23511683 |
cggatagtttgagcgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac |
23511609 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 1528720 - 1528786
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||| || || ||||||||||| |||| |
|
|
| T |
1528720 |
ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcgtaagaaaaacttctatttatac |
1528786 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 29305283 - 29305217
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||||||||||| || ||||| ||||| |||| |
|
|
| T |
29305283 |
ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac |
29305217 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 31845729 - 31845795
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||||||||||| || ||||| ||||| |||| |
|
|
| T |
31845729 |
ttgagtgtaagttttgagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac |
31845795 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 175
Target Start/End: Complemental strand, 9166056 - 9165944
Alignment:
| Q |
62 |
atagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatactagaaaaactacctacacatagaaattt |
161 |
Q |
| |
|
||||||||||||||| |||| |||| ||||||||||||||| ||||||| |||||||| ||||| || || |||||||| |||| || ||| |||| |
|
|
| T |
9166056 |
atagtttgagtgtaaattttttgtagggttgaattgtgacctttttttcccatgagaaatggctatttattgta-aaaaactatctacgcacagacattt |
9165958 |
T |
 |
| Q |
162 |
gatactataactgc |
175 |
Q |
| |
|
|| ||||||||||| |
|
|
| T |
9165957 |
gaaactataactgc |
9165944 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 133
Target Start/End: Complemental strand, 21076633 - 21076559
Alignment:
| Q |
59 |
cggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
|||||| |||||||||||||||| ||||| ||||||||||||| ||||||||| || ||||| ||||| |||| |
|
|
| T |
21076633 |
cggataatttgagtgtaagtttttagtatgattgaattgtgaccattttttcctaagaaaaactactatttatac |
21076559 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 133
Target Start/End: Complemental strand, 21137728 - 21137654
Alignment:
| Q |
59 |
cggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||| ||||||||| ||||| ||||||||||| | |||||||||| || ||||| ||||| |||| |
|
|
| T |
21137728 |
cggatagtttgagcgtaagtttttagtatgattgaattgtgaacagtttttcctaagaaaaactactatttatac |
21137654 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 21310794 - 21310728
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||| ||||||||| || ||||| ||||| |||| |
|
|
| T |
21310794 |
ttgagtgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaactactatttatac |
21310728 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 22809134 - 22809180
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttccta |
113 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
22809134 |
ttgagtgtaagtttttagtatgattgaattgtgacccgtttttccta |
22809180 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 27561963 - 27561897
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||| ||||||| || || ||||||||||| |||| |
|
|
| T |
27561963 |
ttgagtgtaagttttttgtattattgaattgtgacctgtttttcttaagaaaaacttctatttatac |
27561897 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 21168403 - 21168454
Alignment:
| Q |
56 |
atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttt |
108 |
Q |
| |
|
||||||||| |||||||||||||||| |||||| |||||||||||||| |||| |
|
|
| T |
21168403 |
atgcggataatttgagtgtaagtttt-tgtatgattgaattgtgacccttttt |
21168454 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 22509060 - 22509123
Alignment:
| Q |
61 |
gatagtttgagtgt--aagttttctgtatggttgaattgtgacccgtttttcctatgagaaact |
122 |
Q |
| |
|
|||||||||||||| ||||||| |||||| ||||||||||||| ||||||| ||||| ||||| |
|
|
| T |
22509060 |
gatagtttgagtgtgtaagttttgtgtatgattgaattgtgacctgtttttcgtatgaaaaact |
22509123 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 113
Target Start/End: Original strand, 4229879 - 4229974
Alignment:
| Q |
19 |
attcatacattttgacttgtaactcgtttatatctaa-atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttccta |
113 |
Q |
| |
|
||||||||||| |||||| |||||||||| ||| |||||||||||||||| ||||||| | |||||| | |||||||||||| ||| ||||| |
|
|
| T |
4229879 |
attcatacattgcaacttgtgactcgtttatctcttccatgcggatagtttgagcgtaagttatttgtatgatagaattgtgacccttttctccta |
4229974 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 133
Target Start/End: Complemental strand, 22086461 - 22086398
Alignment:
| Q |
70 |
agtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
|||||||||||| ||||| |||||||||||||| ||||||||| || ||||| ||||| |||| |
|
|
| T |
22086461 |
agtgtaagtttttagtatgattgaattgtgacccatttttcctaagaaaaactactatttatac |
22086398 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 102
Target Start/End: Original strand, 4361700 - 4361746
Alignment:
| Q |
56 |
atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacc |
102 |
Q |
| |
|
||||||||| ||||||| |||||||| |||||| ||||||||||||| |
|
|
| T |
4361700 |
atgcggataatttgagtataagttttttgtatgattgaattgtgacc |
4361746 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 113
Target Start/End: Complemental strand, 50826451 - 50826398
Alignment:
| Q |
59 |
cggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttccta |
113 |
Q |
| |
|
|||||| |||||||||||||||| |||||| ||||||||| |||| ||||||||| |
|
|
| T |
50826451 |
cggataatttgagtgtaagtttt-tgtatgattgaattgtaacccttttttccta |
50826398 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 77; Significance: 9e-36; HSPs: 29)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 19 - 171
Target Start/End: Original strand, 25966209 - 25966360
Alignment:
| Q |
19 |
attcatacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgaga |
118 |
Q |
| |
|
||||||||||| |||||| |||||||||| | |||||||| |||||||||||| |||| |||||||||| |||||||| |||||| ||||||| | |||| |
|
|
| T |
25966209 |
attcatacattgtgacttttaactcgtttctctctaaatgtggatagtttgagcgtaaattttctgtattgttgaattctgacccctttttccaacgaga |
25966308 |
T |
 |
| Q |
119 |
aacttctattaatactagaaaaactacctacacatagaaatttgatactataa |
171 |
Q |
| |
|
|||| |||| ||||||| ||||||||||||||||||| |||||| ||||||| |
|
|
| T |
25966309 |
aactgttatttatactag-aaaactacctacacatagatatttgaaactataa |
25966360 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 19 - 152
Target Start/End: Complemental strand, 20442327 - 20442195
Alignment:
| Q |
19 |
attcatacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgaga |
118 |
Q |
| |
|
||||||||||| |||||||| |||||||||| ||| |||||||||||||||| ||||||||||||||||| |||||||||||| | ||||||||||| | |
|
|
| T |
20442327 |
attcatacattgtgacttgttactcgtttatctctgaatgcggatagtttgattgtaagttttctgtatgattgaattgtgacatgcttttcctatgaaa |
20442228 |
T |
 |
| Q |
119 |
aacttctattaatactagaaaaactacctacaca |
152 |
Q |
| |
|
|||| ||||| |||||| | ||||||||||||| |
|
|
| T |
20442227 |
aactactatttatacta-agtaactacctacaca |
20442195 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 19 - 152
Target Start/End: Original strand, 23995683 - 23995815
Alignment:
| Q |
19 |
attcatacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgaga |
118 |
Q |
| |
|
||||||||||| |||||||| |||||||| | ||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||| | | |
|
|
| T |
23995683 |
attcatacattgtgacttgttactcgtttctctctaaatgcagatagtttgagtgtaagttttctgtatgattgaattgtgacatgtttttcctataaaa |
23995782 |
T |
 |
| Q |
119 |
aacttctattaatactagaaaaactacctacaca |
152 |
Q |
| |
|
|||| ||||| |||||| | ||||||||||||| |
|
|
| T |
23995783 |
aactactatttatacta-agtaactacctacaca |
23995815 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 23 - 152
Target Start/End: Original strand, 30051929 - 30052057
Alignment:
| Q |
23 |
atacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaact |
122 |
Q |
| |
|
||||||| |||||||| |||||||| | ||| |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| || || |
|
|
| T |
30051929 |
atacattgtgacttgttactcgtttctctctgaatgcggatagtttgagtgtaagttttctgtatgattgaattgtgacccatttttcctatgaaaagct |
30052028 |
T |
 |
| Q |
123 |
tctattaatactagaaaaactacctacaca |
152 |
Q |
| |
|
||||| |||||| | ||||||||||||| |
|
|
| T |
30052029 |
actatttatacta-agtaactacctacaca |
30052057 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 23 - 152
Target Start/End: Original strand, 30142973 - 30143101
Alignment:
| Q |
23 |
atacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaact |
122 |
Q |
| |
|
||||||| |||||||| |||||||| | ||| |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| || || |
|
|
| T |
30142973 |
atacattgtgacttgttactcgtttctctctgaatgcggatagtttgagtgtaagttttctgtatgattgaattgtgacccatttttcctatgaaaagct |
30143072 |
T |
 |
| Q |
123 |
tctattaatactagaaaaactacctacaca |
152 |
Q |
| |
|
||||| |||||| | ||||||||||||| |
|
|
| T |
30143073 |
actatttatacta-agtaactacctacaca |
30143101 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 30089944 - 30090037
Alignment:
| Q |
23 |
atacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatga |
116 |
Q |
| |
|
||||||| |||||||| |||| ||| | ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
30089944 |
atacattgtgacttgttactcatttctctctgaatgcggatagtttgagtgtaagttttctgtatgattgaattgtgacccgtttttcctatga |
30090037 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 30126549 - 30126642
Alignment:
| Q |
23 |
atacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatga |
116 |
Q |
| |
|
||||||| |||||||| |||| ||| | ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
30126549 |
atacattgtgacttgttactcatttctctctgaatgcggatagtttgagtgtaagttttctgtatgattgaattgtgacccgtttttcctatga |
30126642 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 152
Target Start/End: Complemental strand, 20524252 - 20524118
Alignment:
| Q |
18 |
aattcatacattttgacttgtaactcgtttatatct-aaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatga |
116 |
Q |
| |
|
|||||||||||| |||||| |||||||| | ||| ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |
|
|
| T |
20524252 |
aattcatacattgcaacttgtgactcgtttttctcttaaatgcggatagtttgagtgtaagttttctgtatgattgaattgtgacatgtttttcctatga |
20524153 |
T |
 |
| Q |
117 |
gaaacttctattaatactagaaaaactacctacaca |
152 |
Q |
| |
|
||||| |||| |||||| | ||||||||||||| |
|
|
| T |
20524152 |
aaaactattatttatacta-agtaactacctacaca |
20524118 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 135
Target Start/End: Original strand, 20281173 - 20281287
Alignment:
| Q |
21 |
tcatacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaa |
120 |
Q |
| |
|
||||||||| |||||||| |||||||| | ||| |||||||||||| ||||||||| ||||||||||| |||||||||||| |||||| || ||| ||| |
|
|
| T |
20281173 |
tcatacattctgacttgttactcgtttctctctgaatgcggatagtatgagtgtaaattttctgtatgactgaattgtgacctgttttttctttgaaaaa |
20281272 |
T |
 |
| Q |
121 |
cttctattaatacta |
135 |
Q |
| |
|
|| ||||| |||||| |
|
|
| T |
20281273 |
ctactatttatacta |
20281287 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 138
Target Start/End: Original strand, 21905031 - 21905114
Alignment:
| Q |
55 |
aatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatactagaa |
138 |
Q |
| |
|
|||| |||||||||||||||||||||| |||||| ||| |||||||| ||||| ||||||| ||||| |||| ||||||||| |
|
|
| T |
21905031 |
aatgtggatagtttgagtgtaagttttttgtatgattggtttgtgacctgttttccctatgaaaaactattatttatactagaa |
21905114 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 24896698 - 24896632
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||||||||||| || ||||| ||||| |||| |
|
|
| T |
24896698 |
ttgagtgtaagttttgagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac |
24896632 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 25349334 - 25349392
Alignment:
| Q |
55 |
aatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttccta |
113 |
Q |
| |
|
||||||||||||||||||||||||||| |||||| || ||||||||||||||| |||| |
|
|
| T |
25349334 |
aatgcggatagtttgagtgtaagttttgtgtatgatttgattgtgacccgttttcccta |
25349392 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 133
Target Start/End: Original strand, 16664743 - 16664817
Alignment:
| Q |
59 |
cggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||| ||||||||| ||||| |||||||||||||| ||||| ||| || ||||| ||||| |||| |
|
|
| T |
16664743 |
cggatagtttgagcgtaagtttttagtatgattgaattgtgaccctttttttctaagaaaaactactatttatac |
16664817 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 102
Target Start/End: Original strand, 21256528 - 21256574
Alignment:
| Q |
56 |
atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacc |
102 |
Q |
| |
|
||||||||| |||||||||||||||| |||||| ||||||||||||| |
|
|
| T |
21256528 |
atgcggataatttgagtgtaagttttttgtatgattgaattgtgacc |
21256574 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 22648638 - 22648572
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||| |||||||||| || ||||| ||||| |||| |
|
|
| T |
22648638 |
ttgagtgtaagtttttagtatgattgaattgtgacctgtttttcctaagaaaaactactatttatac |
22648572 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 23190323 - 23190389
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||| | |||||||||||||||||||||||| || ||||| ||||| |||| |
|
|
| T |
23190323 |
ttgagtgtaagtttttagtacgattgaattgtgacccgtttttcctaagaaaaactactatttatac |
23190389 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 23203939 - 23204005
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||| | |||||||||||||||||||||||| || ||||| ||||| |||| |
|
|
| T |
23203939 |
ttgagtgtaagtttttagtacgattgaattgtgacccgtttttcctaagaaaaactactatttatac |
23204005 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 23611578 - 23611644
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||| | |||||||||||||||||||||||| || ||||| ||||| |||| |
|
|
| T |
23611578 |
ttgagtgtaagtttttagtacgattgaattgtgacccgtttttcctaagaaaaactactatttatac |
23611644 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 24967594 - 24967528
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||| ||||||||| || ||||| ||||| |||| |
|
|
| T |
24967594 |
ttgagtgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaactactatttatac |
24967528 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 39227522 - 39227588
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||| ||||||||| || ||||| ||||| |||| |
|
|
| T |
39227522 |
ttgagtgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaactactatttatac |
39227588 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 34827685 - 34827741
Alignment:
| Q |
56 |
atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttccta |
113 |
Q |
| |
|
|||| |||| |||||||||||||||| |||||| |||||||||||||| ||||||||| |
|
|
| T |
34827685 |
atgcagataatttgagtgtaagttttttgtatgattgaattgtgaccc-tttttccta |
34827741 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 103
Target Start/End: Original strand, 10480459 - 10480507
Alignment:
| Q |
55 |
aatgcggatagtttgagtgtaagttttctgtatggttgaattgtgaccc |
103 |
Q |
| |
|
||||||||||||| ||||||||||||| |||||| ||| |||||||||| |
|
|
| T |
10480459 |
aatgcggatagttcgagtgtaagttttgtgtatgattggattgtgaccc |
10480507 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 115
Target Start/End: Original strand, 23769406 - 23769502
Alignment:
| Q |
20 |
ttcatacattttgacttgtaactcgtttatatcta-aatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatg |
115 |
Q |
| |
|
|||||||||| | |||||| |||||||| | ||| |||||||||| ||||||||||| |||| |||||| || || |||||||||||||||||| |
|
|
| T |
23769406 |
ttcatacattgtaacttgtgactcgtttctctcttgaatgcggataatttgagtgtaaattttgtgtatgattagtttatgacccgtttttcctatg |
23769502 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 103
Target Start/End: Complemental strand, 22593817 - 22593770
Alignment:
| Q |
56 |
atgcggatagtttgagtgtaagttttctgtatggttgaattgtgaccc |
103 |
Q |
| |
|
||||| ||| |||||||||||||||| |||||| |||||||||||||| |
|
|
| T |
22593817 |
atgcgcataatttgagtgtaagttttttgtatgattgaattgtgaccc |
22593770 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 22633889 - 22633823
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||| |||||||| | || ||||| ||||| |||| |
|
|
| T |
22633889 |
ttgagtgtaagtttttagtatgattgaattgtgacctgtttttccaaagaaaaactactatttatac |
22633823 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 23615183 - 23615249
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||| ||||||||| || ||||| ||||| |||| |
|
|
| T |
23615183 |
ttgagtgtaagtttttagtatgattgaattgtgacctatttttcctaagaaaaactactatttatac |
23615249 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 133
Target Start/End: Complemental strand, 31817988 - 31817914
Alignment:
| Q |
59 |
cggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||| |||| |||| ||| | ||||||||||||||||||||| || || ||||| ||||| |||| |
|
|
| T |
31817988 |
cggatagtttgagcgtaaatttttagtacgattgaattgtgacccgtttttcataagaaaaactactatttatac |
31817914 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 102
Target Start/End: Original strand, 23870590 - 23870626
Alignment:
| Q |
66 |
tttgagtgtaagttttctgtatggttgaattgtgacc |
102 |
Q |
| |
|
|||||||||||||||| |||||| ||||||||||||| |
|
|
| T |
23870590 |
tttgagtgtaagttttttgtatgattgaattgtgacc |
23870626 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 110
Target Start/End: Original strand, 25118979 - 25119034
Alignment:
| Q |
57 |
tgcggatagtttgag--tgtaagttttctgtatggttgaattgtgacccgtttttc |
110 |
Q |
| |
|
||||||||||||||| |||||| |||| ||||| |||||||||||||| |||||| |
|
|
| T |
25118979 |
tgcggatagtttgagcgtgtaagctttcggtatgtttgaattgtgacccatttttc |
25119034 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0035 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0035
Description:
Target: scaffold0035; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 19 - 152
Target Start/End: Original strand, 25774 - 25906
Alignment:
| Q |
19 |
attcatacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgaga |
118 |
Q |
| |
|
||||||||||| |||||||| |||| ||| | |||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||| | |
|
|
| T |
25774 |
attcatacattgtgacttgttactcatttctctctaaatgcggataatttaagtgtaagttttctgtatgattgaattgtgacccgtttttcctatgaaa |
25873 |
T |
 |
| Q |
119 |
aacttctattaatactagaaaaactacctacaca |
152 |
Q |
| |
|
|||| ||||| |||||| | ||||||||||||| |
|
|
| T |
25874 |
aactactatttatacta-agtaactacctacaca |
25906 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1496 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold1496
Description:
Target: scaffold1496; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 19 - 152
Target Start/End: Complemental strand, 1510 - 1378
Alignment:
| Q |
19 |
attcatacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgaga |
118 |
Q |
| |
|
||||||||||| |||||||| |||||||| | || ||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||| | |
|
|
| T |
1510 |
attcatacattctgacttgttactcgtttctctccgaatgcagatagtttgagtgtaagttttccgtatgattgaattgtgacccgtttttcttatgaaa |
1411 |
T |
 |
| Q |
119 |
aacttctattaatactagaaaaactacctacaca |
152 |
Q |
| |
|
|||| ||||| |||||| | ||||||||||||| |
|
|
| T |
1410 |
aactactatttatacta-agtaactacctacaca |
1378 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0171 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0171
Description:
Target: scaffold0171; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 26949 - 27053
Alignment:
| Q |
19 |
attcatacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgaga |
118 |
Q |
| |
|
||||||||| | ||||||||||||||||| | ||||||||| |||||||||| |||||||||| ||||||||||||||| ||| ||||||||||||||| |
|
|
| T |
26949 |
attcatacagtgtgacttgtaactcgtttctctctaaatgcagatagtttgattgtaagttttttgtatggttgaattgcaacctgtttttcctatgaga |
27048 |
T |
 |
| Q |
119 |
aactt |
123 |
Q |
| |
|
||||| |
|
|
| T |
27049 |
aactt |
27053 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0239 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0239
Description:
Target: scaffold0239; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 5650 - 5547
Alignment:
| Q |
24 |
tacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaactt |
123 |
Q |
| |
|
|||||| |||||||| |||| ||| | ||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||| ||||| |
|
|
| T |
5650 |
tacattgtgacttgttactcatttctctctgaatgcggatagtttgagtgtaagttttctatatgattgaattgtgacccgtttttcatatgaaaaacta |
5551 |
T |
 |
| Q |
124 |
ctat |
127 |
Q |
| |
|
|||| |
|
|
| T |
5550 |
ctat |
5547 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0239; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 65 - 1
Alignment:
| Q |
19 |
attcatacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttct |
83 |
Q |
| |
|
|||| |||||| |||||||| |||| ||| | ||| ||||||||||||||||||||||||||||| |
|
|
| T |
65 |
attcctacattgtgacttgttactcatttctctctgaatgcggatagtttgagtgtaagttttct |
1 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 60; Significance: 1e-25; HSPs: 19)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 56 - 171
Target Start/End: Complemental strand, 20440808 - 20440693
Alignment:
| Q |
56 |
atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatactagaaaaactacctacacatag |
155 |
Q |
| |
|
|||||||||||||||||||||||||||| |||| || ||||||||| |||| ||||||||||||| |||| |||||| |||||||||||||||| || |
|
|
| T |
20440808 |
atgcggatagtttgagtgtaagttttctatatgaatgtattgtgacctcttttccctatgagaaactgttatttatactaaaaaaactacctacacacag |
20440709 |
T |
 |
| Q |
156 |
aaatttgatactataa |
171 |
Q |
| |
|
| |||||| ||||||| |
|
|
| T |
20440708 |
acatttgaaactataa |
20440693 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 56 - 171
Target Start/End: Complemental strand, 20438185 - 20438070
Alignment:
| Q |
56 |
atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatactagaaaaactacctacacatag |
155 |
Q |
| |
|
|||||| ||||||||||||||||||||| |||| || ||||||||| |||| ||||||||||||| |||| |||||| |||||||||||||||| || |
|
|
| T |
20438185 |
atgcgggtagtttgagtgtaagttttctatatgaatgtattgtgacctcttttccctatgagaaactgttatttatactaaaaaaactacctacacacag |
20438086 |
T |
 |
| Q |
156 |
aaatttgatactataa |
171 |
Q |
| |
|
| |||||| ||||||| |
|
|
| T |
20438085 |
acatttgaaactataa |
20438070 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 63 - 171
Target Start/End: Complemental strand, 20443371 - 20443263
Alignment:
| Q |
63 |
tagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatactagaaaaactacctacacatagaaatttg |
162 |
Q |
| |
|
||||||||||||||||||||| |||| || | ||||||| |||| ||||||| ||||| |||| ||| || |||||||||||||||| ||| ||||| |
|
|
| T |
20443371 |
tagtttgagtgtaagttttctatatgaatgtactgtgacctcttttccctatgaaaaactgttatttataataaaaaaactacctacacacagacatttg |
20443272 |
T |
 |
| Q |
163 |
atactataa |
171 |
Q |
| |
|
| ||||||| |
|
|
| T |
20443271 |
aaactataa |
20443263 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 56 - 171
Target Start/End: Complemental strand, 20450803 - 20450689
Alignment:
| Q |
56 |
atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatactagaaaaactacctacacatag |
155 |
Q |
| |
|
|||||| ||||||||||||||||||||| | || || ||||||||| |||| ||||||| ||||| |||| ||| || |||||||||||||||| || |
|
|
| T |
20450803 |
atgcggctagtttgagtgtaagttttctatttgaatgtattgtgacctcttttccctatgaaaaactgttatttataata-aaaaactacctacacacag |
20450705 |
T |
 |
| Q |
156 |
aaatttgatactataa |
171 |
Q |
| |
|
| |||||| ||||||| |
|
|
| T |
20450704 |
acatttgaaactataa |
20450689 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 59 - 133
Target Start/End: Complemental strand, 23496622 - 23496547
Alignment:
| Q |
59 |
cggatagt-ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
|||||||| ||||||||||||||| ||||| |||||||||||||||||||||||| || ||||| ||||| |||| |
|
|
| T |
23496622 |
cggatagtattgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac |
23496547 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 133
Target Start/End: Complemental strand, 11794214 - 11794100
Alignment:
| Q |
20 |
ttcatacattttgacttgtaactcgtttatatctaa-atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgaga |
118 |
Q |
| |
|
|||||||||| |||||| | |||||||||||| ||||||||| ||||||||||| |||| ||||| |||||||||||||| ||||||||||| | |
|
|
| T |
11794214 |
ttcatacattgcaacttgtgattcgtttatatcttccatgcggataatttgagtgtaaattttttgtataattgaattgtgacccttttttcctatggaa |
11794115 |
T |
 |
| Q |
119 |
aacttctattaatac |
133 |
Q |
| |
|
|||| ||||| |||| |
|
|
| T |
11794114 |
aactactatttatac |
11794100 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 19025458 - 19025524
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||| || || ||||||||||| |||| |
|
|
| T |
19025458 |
ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcttaagaaaaacttctatttatac |
19025524 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 19038501 - 19038567
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||| || || ||||||||||| |||| |
|
|
| T |
19038501 |
ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcttaagaaaaacttctatttatac |
19038567 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 23431975 - 23431909
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||||||||||| || ||||| ||||| |||| |
|
|
| T |
23431975 |
ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac |
23431909 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 23491015 - 23490949
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||||||||||| || ||||| ||||| |||| |
|
|
| T |
23491015 |
ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac |
23490949 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 30755597 - 30755663
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||||||||||| || ||||| ||||| |||| |
|
|
| T |
30755597 |
ttgagtgtaagttttgagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac |
30755663 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 16209858 - 16209792
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| ||||| |||||||||||||||||| || ||||| ||||| |||| |
|
|
| T |
16209858 |
ttgagtgtaagtttttagtatgattgaactgtgacccgtttttcctaagaaaaactactatttatac |
16209792 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 19405854 - 19405920
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||| ||||||||| || ||||| ||||| |||| |
|
|
| T |
19405854 |
ttgagtgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaactactatttatac |
19405920 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 108
Target Start/End: Original strand, 17813180 - 17813229
Alignment:
| Q |
59 |
cggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttt |
108 |
Q |
| |
|
||||| ||||||| |||||||||| ||||||||||||||||||| ||||| |
|
|
| T |
17813180 |
cggattgtttgagcgtaagttttcagtatggttgaattgtgacctgtttt |
17813229 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 215
Target Start/End: Complemental strand, 20434453 - 20434293
Alignment:
| Q |
56 |
atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatactagaaaaactacctacacatag |
155 |
Q |
| |
|
|||| |||||||||||| |||||||||| |||| || |||||||| |||| ||||||| ||||| |||| |||| ||||| |||||||||| || |
|
|
| T |
20434453 |
atgctgatagtttgagtataagttttctatatgaatgtgttgtgacctcttttccctatgaaaaactgttatttatacggaaaaaattacctacacacag |
20434354 |
T |
 |
| Q |
156 |
aaatttgatactataactgctaataatgg-ttacgaacacctcttcgatttgaaattcaaa |
215 |
Q |
| |
|
| |||||| ||||||| || | ||| || ||| |||| |||||||||||||| |||||| |
|
|
| T |
20434353 |
acatttgaaactataattgtcactaacggcctacaaacatctcttcgatttgaatttcaaa |
20434293 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 171
Target Start/End: Complemental strand, 20445928 - 20445818
Alignment:
| Q |
63 |
tagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatact--agaaaaactacctacacatagaaatt |
160 |
Q |
| |
|
||||||||||||||||||||| |||| || | ||||||| |||| ||||||| ||||| |||| ||| | | |||||||||||||||| ||| ||| |
|
|
| T |
20445928 |
tagtttgagtgtaagttttctatatgaatgtactgtgacctcttttccctatgaaaaactgttatttataataaaaaaaaactacctacacacagacatt |
20445829 |
T |
 |
| Q |
161 |
tgatactataa |
171 |
Q |
| |
|
||| ||||||| |
|
|
| T |
20445828 |
tgaaactataa |
20445818 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 26460609 - 26460692
Alignment:
| Q |
20 |
ttcatacattttgacttgtaactcgtttatatctaa-atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacc |
102 |
Q |
| |
|
|||||||||| |||||| |||||||||| ||| ||||||||| |||||||||||||||| |||||| ||| ||||||||| |
|
|
| T |
26460609 |
ttcatacattgcaacttgtgactcgtttatctcttccatgcggataatttgagtgtaagttttgtgtatgattggattgtgacc |
26460692 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 1557751 - 1557817
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||| ||||||||| || ||||| ||||| |||| |
|
|
| T |
1557751 |
ttgagtgtaagttttgagtatgattgaattgtgacctctttttcctaagaaaaactactatttatac |
1557817 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 23598141 - 23598179
Alignment:
| Q |
66 |
tttgagtgtaagttttctgtatggttgaattgtgacccg |
104 |
Q |
| |
|
|||||| |||||||||| ||||||||||||||||||||| |
|
|
| T |
23598141 |
tttgagcgtaagttttcagtatggttgaattgtgacccg |
23598179 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 51; Significance: 3e-20; HSPs: 11)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 152
Target Start/End: Original strand, 27812386 - 27812483
Alignment:
| Q |
54 |
aaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatactagaaaaactacctacaca |
152 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| | ||| ||||| |||| |||||| | ||||||||||||| |
|
|
| T |
27812386 |
aaatgcggataatttgagtgtaagttttctgtatgattgaattgtgacccgtttttcatgtgaaaaactattatttatacta-agcaactacctacaca |
27812483 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 50687649 - 50687552
Alignment:
| Q |
20 |
ttcatacattttgacttgtaactcgtttatatcta-aatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatga |
116 |
Q |
| |
|
|||||||||| | |||||| |||||||| | ||| ||||||||||| |||||||||||||| |||||| ||| |||||||||||||||||||||| |
|
|
| T |
50687649 |
ttcatacattataacttgtgactcgtttgtctcttgaatgcggatagcctgagtgtaagttttgtgtatgattggtttgtgacccgtttttcctatga |
50687552 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 56 - 112
Target Start/End: Original strand, 31079821 - 31079877
Alignment:
| Q |
56 |
atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcct |
112 |
Q |
| |
|
||||||||| |||||||||||||||| |||||| |||||||||||||| |||||||| |
|
|
| T |
31079821 |
atgcggataatttgagtgtaagttttttgtatgattgaattgtgacccctttttcct |
31079877 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 13277290 - 13277356
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||| |||||||||| || ||||| ||||| |||| |
|
|
| T |
13277290 |
ttgagtgtaagtttttagtatgattgaattgtgacctgtttttcctaagaaaaactactatttatac |
13277356 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 18108755 - 18108689
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||| ||||||||| || ||||| ||||| |||| |
|
|
| T |
18108755 |
ttgagtgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaactactatttatac |
18108689 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 113
Target Start/End: Original strand, 14022497 - 14022544
Alignment:
| Q |
66 |
tttgagtgtaagttttctgtatggttgaattgtgacccgtttttccta |
113 |
Q |
| |
|
|||||||||||||||| ||||| |||||||||||||| ||||||||| |
|
|
| T |
14022497 |
tttgagtgtaagtttttagtatgattgaattgtgacccttttttccta |
14022544 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 57 - 135
Target Start/End: Original strand, 22271926 - 22272007
Alignment:
| Q |
57 |
tgcggatagtttga---gtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatacta |
135 |
Q |
| |
|
|||||||||||||| ||||||||||| ||| | |||||||||||||||||||||||||| ||||| |||| |||||| |
|
|
| T |
22271926 |
tgcggatagtttgaagtgtgtaagttttatgtgtatgtgaattgtgacccgtttttcctatgaaaaactcttatttatacta |
22272007 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 13292668 - 13292734
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||| |||||||||| || ||||| ||||| |||| |
|
|
| T |
13292668 |
ttgagtgtaagtttttagtatgattgaattgtgacatgtttttcctaagaaaaactactatttatac |
13292734 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 14714218 - 14714276
Alignment:
| Q |
70 |
agtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctatt |
128 |
Q |
| |
|
||||||| |||| ||||| |||||||||||||||||||||||| || ||||| ||||| |
|
|
| T |
14714218 |
agtgtaaatttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatt |
14714276 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 14775898 - 14775956
Alignment:
| Q |
70 |
agtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctatt |
128 |
Q |
| |
|
||||||| |||| ||||| |||||||||||||||||||||||| || ||||| ||||| |
|
|
| T |
14775898 |
agtgtaaatttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatt |
14775956 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 49526523 - 49526581
Alignment:
| Q |
55 |
aatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttccta |
113 |
Q |
| |
|
|||||||||||||||| |||||||||| |||||| ||| ||||| |||| |||| |||| |
|
|
| T |
49526523 |
aatgcggatagtttgattgtaagttttgtgtatgattggattgtcaccctttttcccta |
49526581 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0297 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0297
Description:
Target: scaffold0297; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 138
Target Start/End: Original strand, 8803 - 8922
Alignment:
| Q |
20 |
ttcatacattttgacttgtaactcgtttatatcta-aatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgaga |
118 |
Q |
| |
|
|||||||||| | |||||| |||||||| | ||| |||| |||||||||||||||||||||| |||||| ||| ||||||||||||||| | |||| | |
|
|
| T |
8803 |
ttcatacattgtaacttgtgactcgtttctctcttgaatgtggatagtttgagtgtaagttttgtgtatgattggattgtgacccgttttccttatggaa |
8902 |
T |
 |
| Q |
119 |
aacttctattaatactagaa |
138 |
Q |
| |
|
|||| ||||| ||||||||| |
|
|
| T |
8903 |
aactactatttatactagaa |
8922 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0504 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0504
Description:
Target: scaffold0504; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 57 - 134
Target Start/End: Original strand, 683 - 760
Alignment:
| Q |
57 |
tgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatact |
134 |
Q |
| |
|
||||||||||||||||||||||||| |||||| |||||||||||| ||||| ||||||| ||||| ||||| ||||| |
|
|
| T |
683 |
tgcggatagtttgagtgtaagttttttgtatgactgaattgtgacctgttttccctatgaaaaactactatttatact |
760 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 5)
Name: scaffold0001
Description:
Target: scaffold0001; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 25159 - 25225
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||||||||||| || ||||||||||| |||| |
|
|
| T |
25159 |
ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaacttctatttatac |
25225 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 28657 - 28723
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||||||||||| || ||||||||||| |||| |
|
|
| T |
28657 |
ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaacttctatttatac |
28723 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 115416 - 115482
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||||||||||| || ||||||||||| |||| |
|
|
| T |
115416 |
ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaacttctatttatac |
115482 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 122
Target Start/End: Complemental strand, 390143 - 390088
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaact |
122 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||||||||||| || ||||| |
|
|
| T |
390143 |
ttgagtgtaagttttgagtatgattgaattgtgacccgtttttcctaagaaaaact |
390088 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 129968 - 130033
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||| | |||||||||| || ||||||||||| |||| |
|
|
| T |
129968 |
ttgagtgtaagtttttagtatgattgaattgtga-ctgtttttcctaagaaaaacttctatttatac |
130033 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0021 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 2)
Name: scaffold0021
Description:
Target: scaffold0021; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 67 - 128
Target Start/End: Original strand, 18569 - 18630
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctatt |
128 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||||||||||| || ||||||||||| |
|
|
| T |
18569 |
ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaacttctatt |
18630 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0021; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 67 - 128
Target Start/End: Original strand, 28100 - 28161
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctatt |
128 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||||||||||| || ||||||||||| |
|
|
| T |
28100 |
ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaacttctatt |
28161 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 60 - 133
Target Start/End: Original strand, 33401 - 33474
Alignment:
| Q |
60 |
ggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
|||||||||||| ||||||||| ||||| |||||||||||||||||||||||| || ||||| ||||| |||| |
|
|
| T |
33401 |
ggatagtttgagcgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac |
33474 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0130 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0130
Description:
Target: scaffold0130; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 29411 - 29477
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||||||||||| || ||||| ||||| |||| |
|
|
| T |
29411 |
ttgagtgtaagttttgagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac |
29477 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0130; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 39920 - 39854
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| |||||| ||||||||||||| |||||||||| || ||||| ||||| |||| |
|
|
| T |
39920 |
ttgagtgtaagttttttgtatgattgaattgtgacctgtttttcctaagaaaaactactatttatac |
39854 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0126 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0126
Description:
Target: scaffold0126; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 31245 - 31359
Alignment:
| Q |
19 |
attcatacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgaga |
118 |
Q |
| |
|
||||||||||| ||| |||| || ||||| | | | |||| ||||||||||||||| ||||||||||||| ||||| | |||| |||||||||| || | |
|
|
| T |
31245 |
attcatacattgtgatttgttacgcgtttctctttgaatgtggatagtttgagtgttagttttctgtatgattgaactctgacatgtttttcctaagaaa |
31344 |
T |
 |
| Q |
119 |
aacttctattaatac |
133 |
Q |
| |
|
|||| ||||| |||| |
|
|
| T |
31345 |
aactactatttatac |
31359 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0108 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0108
Description:
Target: scaffold0108; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 23088 - 23022
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||||||||||| || ||||| ||||| |||| |
|
|
| T |
23088 |
ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac |
23022 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0108; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 44264 - 44198
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||||||||||| || ||||| ||||| |||| |
|
|
| T |
44264 |
ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac |
44198 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0081 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0081
Description:
Target: scaffold0081; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 44331 - 44397
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| |||||| ||||||||||||| |||||||||| || ||||| ||||| |||| |
|
|
| T |
44331 |
ttgagtgtaagttttttgtatgattgaattgtgacctgtttttcctaagaaaaactcctatttatac |
44397 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0060 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0060
Description:
Target: scaffold0060; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 32137 - 32071
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||||||||||| || ||||| ||||| |||| |
|
|
| T |
32137 |
ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac |
32071 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0046 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0046
Description:
Target: scaffold0046; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 30651 - 30585
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||||||||||| || ||||| ||||| |||| |
|
|
| T |
30651 |
ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac |
30585 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0026 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0026
Description:
Target: scaffold0026; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 118437 - 118503
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||||||||||| || ||||| ||||| |||| |
|
|
| T |
118437 |
ttgagtgtaagttttgcgtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac |
118503 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0026; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 142287 - 142353
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| |||| |||||||||||||||||||||||| || ||||| ||||| |||| |
|
|
| T |
142287 |
ttgagtgtaagttttgaatatgattgaattgtgacccgtttttcctaagaaaaactactatttatac |
142353 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 5)
Name: scaffold0023
Description:
Target: scaffold0023; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 62206 - 62140
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||||||||||| || ||||| ||||| |||| |
|
|
| T |
62206 |
ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac |
62140 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 71384 - 71318
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||||||||||| || ||||| ||||| |||| |
|
|
| T |
71384 |
ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac |
71318 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 6727 - 6793
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| |||||| ||||||||||| || ||||||||| || ||||| ||||| |||| |
|
|
| T |
6727 |
ttgagtgtaagttttttgtatgattgaattgtgatccctttttcctaagaaaaactactatttatac |
6793 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 85067 - 85001
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||| | ||||| |||||||||||||||||||||||| || ||||| ||||| |||| |
|
|
| T |
85067 |
ttgagtgtaagttcttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac |
85001 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 128
Target Start/End: Complemental strand, 22680 - 22619
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctatt |
128 |
Q |
| |
|
||||||||||||||| ||||| | ||||| |||||||||||||||| || ||||| ||||| |
|
|
| T |
22680 |
ttgagtgtaagtttttagtatgatcgaattatgacccgtttttcctaagaaaaactactatt |
22619 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0063 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0063
Description:
Target: scaffold0063; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 133
Target Start/End: Complemental strand, 70711 - 70634
Alignment:
| Q |
56 |
atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||| ||||||||||||| || |||||| ||||||||||| ||||||| |||||| ||||| ||||| |||| |
|
|
| T |
70711 |
atgcggataatttgagtgtaagtattttgtatgattgaattgtgatccgttttccctatggaaaactactatttatac |
70634 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0019 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0019
Description:
Target: scaffold0019; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 59 - 133
Target Start/End: Original strand, 151462 - 151537
Alignment:
| Q |
59 |
cggatagt-ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
|||||||| ||||||||||||||| ||||| |||||||||||||| ||||||||| || ||||| ||||| |||| |
|
|
| T |
151462 |
cggatagtattgagtgtaagtttttagtatgattgaattgtgacccctttttcctaagaaaaactactatttatac |
151537 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0770 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0770
Description:
Target: scaffold0770; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 122
Target Start/End: Original strand, 3760 - 3825
Alignment:
| Q |
56 |
atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaact |
122 |
Q |
| |
|
||||||||| |||||||||||||||| |||||| |||||||||||||| |||| | || |||||||| |
|
|
| T |
3760 |
atgcggataatttgagtgtaagtttt-tgtatgattgaattgtgaccctttttacttaagagaaact |
3825 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0740 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0740
Description:
Target: scaffold0740; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 5693 - 5627
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||| ||||||||| || ||||| ||||| |||| |
|
|
| T |
5693 |
ttgagtgtaagtttttagtatgattgaattgtgacccatttttcctaagaaaaactactatttatac |
5627 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0480 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0480
Description:
Target: scaffold0480; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 3805 - 3711
Alignment:
| Q |
20 |
ttcatacattttgacttgtaactcgtttatatctaa-atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttccta |
113 |
Q |
| |
|
||||||||||| |||||| |||||||| | ||| ||||||||| |||||||||||||||| |||||| | |||||||||||| |||| |||| |
|
|
| T |
3805 |
ttcatacatttcaacttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgatagaattgtgacccattttcccta |
3711 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0358 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0358
Description:
Target: scaffold0358; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 128
Target Start/End: Complemental strand, 15785 - 15715
Alignment:
| Q |
59 |
cggatagt-ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctatt |
128 |
Q |
| |
|
|||||||| ||||||||||||||| ||||| |||| ||||||||||||||||||| || ||||| ||||| |
|
|
| T |
15785 |
cggatagtattgagtgtaagttttgagtatgattgatttgtgacccgtttttcctaagaaaaactactatt |
15715 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0282 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0282
Description:
Target: scaffold0282; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 8829 - 8895
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||| |||||||||| || ||||| ||||| |||| |
|
|
| T |
8829 |
ttgagtgtaagtttttagtatgattgaattgtgacctgtttttcctaagaaaaactactatttatac |
8895 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0270 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0270
Description:
Target: scaffold0270; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 8149 - 8215
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||||||| ||| || ||||| ||||| |||| |
|
|
| T |
8149 |
ttgagtgtaagtttttagtatgattgaattgtgacccgttttttctaagaaaaactactatttatac |
8215 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0270; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 15279 - 15345
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||||||| ||| || ||||| ||||| |||| |
|
|
| T |
15279 |
ttgagtgtaagtttttagtatgattgaattgtgacccgttttttctaagaaaaactactatttatac |
15345 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0241 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0241
Description:
Target: scaffold0241; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 25142 - 25076
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||| ||||||||| || ||||| ||||| |||| |
|
|
| T |
25142 |
ttgagtgtaagtttttagtatgattgaattgtgacccatttttcctaagaaaaactactatttatac |
25076 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0193 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0193
Description:
Target: scaffold0193; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 26847 - 26893
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttccta |
113 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
26847 |
ttgagtgtaagtttttagtatgattgaattgtgacccgtttttccta |
26893 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0101 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0101
Description:
Target: scaffold0101; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 46338 - 46404
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||| ||||||||| || ||||| ||||| |||| |
|
|
| T |
46338 |
ttgagtgtaagtttttagtatgattgaattgtgacccatttttcctaagaaaaactactatttatac |
46404 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0101; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 50976 - 51042
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||| ||||||||| || ||||| ||||| |||| |
|
|
| T |
50976 |
ttgagtgtaagtttttagtatgattgaattgtgacccatttttcctaagaaaaactactatttatac |
51042 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0080 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0080
Description:
Target: scaffold0080; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 2493 - 2427
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||| ||||||||| ||||| ||||||||||||||||||||| || || ||||||||||| |||| |
|
|
| T |
2493 |
ttgagggtaagtttttggtatgattgaattgtgacccgtttttcttaagaaaaacttctatttatac |
2427 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0064 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0064
Description:
Target: scaffold0064; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 43189 - 43255
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
|||||||||||| || ||||| |||||||||||||||||||||||| || ||||| ||||| |||| |
|
|
| T |
43189 |
ttgagtgtaagtgtttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac |
43255 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0029 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0029
Description:
Target: scaffold0029; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 122
Target Start/End: Original strand, 102064 - 102129
Alignment:
| Q |
56 |
atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaact |
122 |
Q |
| |
|
||||||||| |||||||||||||||| |||||| |||||||||||||| |||| | || |||||||| |
|
|
| T |
102064 |
atgcggataatttgagtgtaagtttt-tgtatgattgaattgtgaccctttttccttaagagaaact |
102129 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0022 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0022
Description:
Target: scaffold0022; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 58562 - 58496
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||| |||||||||| || ||||| ||||| |||| |
|
|
| T |
58562 |
ttgagtgtaagtttttagtatgattgaattgtgacctgtttttcctaagaaaaactactatttatac |
58496 |
T |
 |
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Target: scaffold0168 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0168
Description:
Target: scaffold0168; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 133
Target Start/End: Original strand, 1464 - 1541
Alignment:
| Q |
56 |
atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||| |||||||||||||||| |||||| |||| ||||||||| |||| | || || ||||| ||||| |||| |
|
|
| T |
1464 |
atgcggataatttgagtgtaagttttttgtatgattgacttgtgaccctttttccttaggaaaaactactatttatac |
1541 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0059 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0059
Description:
Target: scaffold0059; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 133
Target Start/End: Original strand, 68171 - 68244
Alignment:
| Q |
60 |
ggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
|||||||||||| ||||||||| ||||| |||||||||||| | ||||||||| || ||||| ||||| |||| |
|
|
| T |
68171 |
ggatagtttgagcgtaagtttttagtatgattgaattgtgactcttttttcctaagaaaaactactatttatac |
68244 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0059; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 133
Target Start/End: Original strand, 76276 - 76349
Alignment:
| Q |
60 |
ggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
|||||||||||| ||||||||| ||||| |||||||||||| | ||||||||| || ||||| ||||| |||| |
|
|
| T |
76276 |
ggatagtttgagcgtaagtttttagtatgattgaattgtgactcttttttcctaagaaaaactactatttatac |
76349 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0016 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0016
Description:
Target: scaffold0016; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 113
Target Start/End: Complemental strand, 200189 - 200137
Alignment:
| Q |
60 |
ggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttccta |
113 |
Q |
| |
|
||||| |||||||||||||||| |||||| |||||||||||||| ||||||||| |
|
|
| T |
200189 |
ggataatttgagtgtaagtttt-tgtatgattgaattgtgacccttttttccta |
200137 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0013
Description:
Target: scaffold0013; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 133
Target Start/End: Complemental strand, 129230 - 129157
Alignment:
| Q |
60 |
ggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
|||||||||||| |||| |||| ||||| |||||||||||||| ||||||||| || ||||| ||||| |||| |
|
|
| T |
129230 |
ggatagtttgagcgtaaatttttagtatgattgaattgtgacccttttttcctaagaaaaactactatttatac |
129157 |
T |
 |
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Target: scaffold0151 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0151
Description:
Target: scaffold0151; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 14204 - 14255
Alignment:
| Q |
56 |
atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttt |
108 |
Q |
| |
|
||||||||| |||||||||||||||| |||||| |||||||||||||| |||| |
|
|
| T |
14204 |
atgcggataatttgagtgtaagtttt-tgtatgattgaattgtgacccttttt |
14255 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0509 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0509
Description:
Target: scaffold0509; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 133
Target Start/End: Original strand, 1293 - 1356
Alignment:
| Q |
70 |
agtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
|||||||||||| ||||| ||||||||||||| |||||||||| || ||||| ||||| |||| |
|
|
| T |
1293 |
agtgtaagtttttagtatgattgaattgtgacctgtttttcctaagaaaaactactatttatac |
1356 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0509; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 133
Target Start/End: Original strand, 7721 - 7784
Alignment:
| Q |
70 |
agtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
|||||||||||| ||||| ||||||||||||| |||||||||| || ||||| ||||| |||| |
|
|
| T |
7721 |
agtgtaagtttttagtatgattgaattgtgacctgtttttcctaagaaaaactactatttatac |
7784 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0304 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0304
Description:
Target: scaffold0304; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 133
Target Start/End: Original strand, 5853 - 5916
Alignment:
| Q |
70 |
agtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
|||||||||||| ||||| |||||||||||||| ||||||||| || ||||| ||||| |||| |
|
|
| T |
5853 |
agtgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaactactatttatac |
5916 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0190 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0190
Description:
Target: scaffold0190; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 111
Target Start/End: Complemental strand, 7495 - 7440
Alignment:
| Q |
56 |
atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcc |
111 |
Q |
| |
|
||||||||| |||||||||| ||||| |||||| |||||||||||| | ||||||| |
|
|
| T |
7495 |
atgcggataatttgagtgtatgttttttgtatgattgaattgtgactcttttttcc |
7440 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0216 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0216
Description:
Target: scaffold0216; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 20041 - 20107
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||| ||||||||| ||||| |||||||||||||| ||||||||| || ||||| ||||| |||| |
|
|
| T |
20041 |
ttgagcgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaactactatttatac |
20107 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0077 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0077
Description:
Target: scaffold0077; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 102
Target Start/End: Complemental strand, 12397 - 12351
Alignment:
| Q |
56 |
atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacc |
102 |
Q |
| |
|
||||||||| |||||||||||||||| |||||| |||| |||||||| |
|
|
| T |
12397 |
atgcggataatttgagtgtaagttttttgtatgattgatttgtgacc |
12351 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0053 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0053
Description:
Target: scaffold0053; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 45304 - 45370
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||| ||||||||| ||||| |||||||||||||| ||||||||| || ||||| ||||| |||| |
|
|
| T |
45304 |
ttgagcgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaactactatttatac |
45370 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0040 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0040
Description:
Target: scaffold0040; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 41396 - 41330
Alignment:
| Q |
67 |
ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||||||||| ||||| || |||||||||| |||||||||| || ||||| ||||| |||| |
|
|
| T |
41396 |
ttgagtgtaagtttttagtatgattaaattgtgacctgtttttcctaagaaaaactactatttatac |
41330 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0005 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0005
Description:
Target: scaffold0005; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 63832 - 63774
Alignment:
| Q |
70 |
agtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctatt |
128 |
Q |
| |
|
||||||| |||| ||||| |||||||||||||||||||||||| || ||||| ||||| |
|
|
| T |
63832 |
agtgtaaatttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatt |
63774 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0100 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0100
Description:
Target: scaffold0100; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 133
Target Start/End: Complemental strand, 9056 - 8980
Alignment:
| Q |
56 |
atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac |
133 |
Q |
| |
|
||||||||| ||||| |||||||||| |||||| |||||||||||| | |||| | || |||||||| ||||| |||| |
|
|
| T |
9056 |
atgcggataatttgaatgtaagtttt-tgtatgattgaattgtgactctttttccttaagagaaactactatttatac |
8980 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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