View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19379_low_68 (Length: 292)

Name: NF19379_low_68
Description: NF19379
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19379_low_68
NF19379_low_68
[»] chr7 (17 HSPs)
chr7 (19-281)||(10478212-10478475)
chr7 (18-140)||(18450773-18450895)
chr7 (19-135)||(41239245-41239360)
chr7 (19-108)||(16713294-16713383)
chr7 (19-108)||(17687530-17687619)
chr7 (67-133)||(18174933-18174999)
chr7 (56-109)||(24876425-24876478)
chr7 (59-133)||(11989458-11989533)
chr7 (56-102)||(40342912-40342958)
chr7 (56-111)||(10827855-10827910)
chr7 (56-111)||(11021647-11021702)
chr7 (67-133)||(1978290-1978356)
chr7 (67-133)||(14035939-14036005)
chr7 (67-133)||(14345969-14346035)
chr7 (67-133)||(15758558-15758624)
chr7 (67-133)||(18115295-18115360)
chr7 (67-133)||(18141863-18141928)
[»] chr3 (17 HSPs)
chr3 (23-279)||(13101679-13101935)
chr3 (18-229)||(14345594-14345804)
chr3 (19-226)||(55002384-55002590)
chr3 (19-152)||(14133285-14133416)
chr3 (67-133)||(10139760-10139826)
chr3 (67-128)||(10171132-10171193)
chr3 (67-135)||(1934709-1934777)
chr3 (67-133)||(13299533-13299599)
chr3 (67-133)||(13310191-13310257)
chr3 (67-133)||(14683217-14683283)
chr3 (56-102)||(43135641-43135687)
chr3 (66-122)||(13023884-13023940)
chr3 (66-113)||(132520-132567)
chr3 (66-133)||(12021543-12021610)
chr3 (70-133)||(12491916-12491979)
chr3 (59-128)||(12844631-12844700)
chr3 (57-135)||(13905960-13906040)
[»] chr5 (16 HSPs)
chr5 (18-221)||(19859599-19859801)
chr5 (19-260)||(19212248-19212489)
chr5 (59-133)||(21530303-21530378)
chr5 (67-133)||(21504636-21504702)
chr5 (67-133)||(26274165-26274231)
chr5 (56-133)||(20024511-20024587)
chr5 (67-133)||(20506387-20506453)
chr5 (19-88)||(20249266-20249335)
chr5 (56-131)||(10624306-10624381)
chr5 (56-102)||(18156174-18156220)
chr5 (58-108)||(23656553-23656603)
chr5 (58-108)||(23801967-23802017)
chr5 (55-100)||(16832141-16832186)
chr5 (67-128)||(21982681-21982742)
chr5 (19-135)||(17432676-17432795)
chr5 (169-221)||(19749823-19749875)
[»] chr8 (21 HSPs)
chr8 (19-175)||(22698752-22698907)
chr8 (19-221)||(18846665-18846863)
chr8 (19-175)||(17840057-17840212)
chr8 (63-152)||(16777929-16778017)
chr8 (20-138)||(15911707-15911826)
chr8 (56-133)||(18735370-18735446)
chr8 (19-77)||(17637891-17637949)
chr8 (67-133)||(22352085-22352151)
chr8 (56-113)||(22698159-22698216)
chr8 (66-133)||(29708237-29708304)
chr8 (67-133)||(17426168-17426234)
chr8 (59-133)||(41438908-41438982)
chr8 (57-135)||(23237186-23237266)
chr8 (70-133)||(22064586-22064649)
chr8 (67-133)||(16668026-16668092)
chr8 (57-108)||(22456380-22456433)
chr8 (67-133)||(25389054-25389120)
chr8 (71-116)||(13764589-13764634)
chr8 (56-100)||(15337344-15337388)
chr8 (56-100)||(15426409-15426453)
chr8 (56-100)||(15517713-15517757)
[»] scaffold0058 (1 HSPs)
scaffold0058 (18-202)||(15048-15233)
[»] chr1 (18 HSPs)
chr1 (19-278)||(18530398-18530659)
chr1 (19-152)||(21550504-21550636)
chr1 (59-133)||(23511609-23511683)
chr1 (67-133)||(1528720-1528786)
chr1 (67-133)||(29305217-29305283)
chr1 (67-133)||(31845729-31845795)
chr1 (62-175)||(9165944-9166056)
chr1 (59-133)||(21076559-21076633)
chr1 (59-133)||(21137654-21137728)
chr1 (67-133)||(21310728-21310794)
chr1 (67-113)||(22809134-22809180)
chr1 (67-133)||(27561897-27561963)
chr1 (56-108)||(21168403-21168454)
chr1 (61-122)||(22509060-22509123)
chr1 (19-113)||(4229879-4229974)
chr1 (70-133)||(22086398-22086461)
chr1 (56-102)||(4361700-4361746)
chr1 (59-113)||(50826398-50826451)
[»] chr2 (29 HSPs)
chr2 (19-171)||(25966209-25966360)
chr2 (19-152)||(20442195-20442327)
chr2 (19-152)||(23995683-23995815)
chr2 (23-152)||(30051929-30052057)
chr2 (23-152)||(30142973-30143101)
chr2 (23-116)||(30089944-30090037)
chr2 (23-116)||(30126549-30126642)
chr2 (18-152)||(20524118-20524252)
chr2 (21-135)||(20281173-20281287)
chr2 (55-138)||(21905031-21905114)
chr2 (67-133)||(24896632-24896698)
chr2 (55-113)||(25349334-25349392)
chr2 (59-133)||(16664743-16664817)
chr2 (56-102)||(21256528-21256574)
chr2 (67-133)||(22648572-22648638)
chr2 (67-133)||(23190323-23190389)
chr2 (67-133)||(23203939-23204005)
chr2 (67-133)||(23611578-23611644)
chr2 (67-133)||(24967528-24967594)
chr2 (67-133)||(39227522-39227588)
chr2 (56-113)||(34827685-34827741)
chr2 (55-103)||(10480459-10480507)
chr2 (20-115)||(23769406-23769502)
chr2 (56-103)||(22593770-22593817)
chr2 (67-133)||(22633823-22633889)
chr2 (67-133)||(23615183-23615249)
chr2 (59-133)||(31817914-31817988)
chr2 (66-102)||(23870590-23870626)
chr2 (57-110)||(25118979-25119034)
[»] scaffold0035 (1 HSPs)
scaffold0035 (19-152)||(25774-25906)
[»] scaffold1496 (1 HSPs)
scaffold1496 (19-152)||(1378-1510)
[»] scaffold0171 (1 HSPs)
scaffold0171 (19-123)||(26949-27053)
[»] scaffold0239 (2 HSPs)
scaffold0239 (24-127)||(5547-5650)
scaffold0239 (19-83)||(1-65)
[»] chr6 (19 HSPs)
chr6 (56-171)||(20440693-20440808)
chr6 (56-171)||(20438070-20438185)
chr6 (63-171)||(20443263-20443371)
chr6 (56-171)||(20450689-20450803)
chr6 (59-133)||(23496547-23496622)
chr6 (20-133)||(11794100-11794214)
chr6 (67-133)||(19025458-19025524)
chr6 (67-133)||(19038501-19038567)
chr6 (67-133)||(23431909-23431975)
chr6 (67-133)||(23490949-23491015)
chr6 (67-133)||(30755597-30755663)
chr6 (67-133)||(16209792-16209858)
chr6 (67-133)||(19405854-19405920)
chr6 (59-108)||(17813180-17813229)
chr6 (56-215)||(20434293-20434453)
chr6 (63-171)||(20445818-20445928)
chr6 (20-102)||(26460609-26460692)
chr6 (67-133)||(1557751-1557817)
chr6 (66-104)||(23598141-23598179)
[»] chr4 (11 HSPs)
chr4 (54-152)||(27812386-27812483)
chr4 (20-116)||(50687552-50687649)
chr4 (56-112)||(31079821-31079877)
chr4 (67-133)||(13277290-13277356)
chr4 (67-133)||(18108689-18108755)
chr4 (66-113)||(14022497-14022544)
chr4 (57-135)||(22271926-22272007)
chr4 (67-133)||(13292668-13292734)
chr4 (70-128)||(14714218-14714276)
chr4 (70-128)||(14775898-14775956)
chr4 (55-113)||(49526523-49526581)
[»] scaffold0297 (1 HSPs)
scaffold0297 (20-138)||(8803-8922)
[»] scaffold0504 (1 HSPs)
scaffold0504 (57-134)||(683-760)
[»] scaffold0001 (5 HSPs)
scaffold0001 (67-133)||(25159-25225)
scaffold0001 (67-133)||(28657-28723)
scaffold0001 (67-133)||(115416-115482)
scaffold0001 (67-122)||(390088-390143)
scaffold0001 (67-133)||(129968-130033)
[»] scaffold0021 (2 HSPs)
scaffold0021 (67-128)||(18569-18630)
scaffold0021 (67-128)||(28100-28161)
[»] scaffold0003 (1 HSPs)
scaffold0003 (60-133)||(33401-33474)
[»] scaffold0130 (2 HSPs)
scaffold0130 (67-133)||(29411-29477)
scaffold0130 (67-133)||(39854-39920)
[»] scaffold0126 (1 HSPs)
scaffold0126 (19-133)||(31245-31359)
[»] scaffold0108 (2 HSPs)
scaffold0108 (67-133)||(23022-23088)
scaffold0108 (67-133)||(44198-44264)
[»] scaffold0081 (1 HSPs)
scaffold0081 (67-133)||(44331-44397)
[»] scaffold0060 (1 HSPs)
scaffold0060 (67-133)||(32071-32137)
[»] scaffold0046 (1 HSPs)
scaffold0046 (67-133)||(30585-30651)
[»] scaffold0026 (2 HSPs)
scaffold0026 (67-133)||(118437-118503)
scaffold0026 (67-133)||(142287-142353)
[»] scaffold0023 (5 HSPs)
scaffold0023 (67-133)||(62140-62206)
scaffold0023 (67-133)||(71318-71384)
scaffold0023 (67-133)||(6727-6793)
scaffold0023 (67-133)||(85001-85067)
scaffold0023 (67-128)||(22619-22680)
[»] scaffold0063 (1 HSPs)
scaffold0063 (56-133)||(70634-70711)
[»] scaffold0019 (1 HSPs)
scaffold0019 (59-133)||(151462-151537)
[»] scaffold0770 (1 HSPs)
scaffold0770 (56-122)||(3760-3825)
[»] scaffold0740 (1 HSPs)
scaffold0740 (67-133)||(5627-5693)
[»] scaffold0480 (1 HSPs)
scaffold0480 (20-113)||(3711-3805)
[»] scaffold0358 (1 HSPs)
scaffold0358 (59-128)||(15715-15785)
[»] scaffold0282 (1 HSPs)
scaffold0282 (67-133)||(8829-8895)
[»] scaffold0270 (2 HSPs)
scaffold0270 (67-133)||(8149-8215)
scaffold0270 (67-133)||(15279-15345)
[»] scaffold0241 (1 HSPs)
scaffold0241 (67-133)||(25076-25142)
[»] scaffold0193 (1 HSPs)
scaffold0193 (67-113)||(26847-26893)
[»] scaffold0101 (2 HSPs)
scaffold0101 (67-133)||(46338-46404)
scaffold0101 (67-133)||(50976-51042)
[»] scaffold0080 (1 HSPs)
scaffold0080 (67-133)||(2427-2493)
[»] scaffold0064 (1 HSPs)
scaffold0064 (67-133)||(43189-43255)
[»] scaffold0029 (1 HSPs)
scaffold0029 (56-122)||(102064-102129)
[»] scaffold0022 (1 HSPs)
scaffold0022 (67-133)||(58496-58562)
[»] scaffold0168 (1 HSPs)
scaffold0168 (56-133)||(1464-1541)
[»] scaffold0059 (2 HSPs)
scaffold0059 (60-133)||(68171-68244)
scaffold0059 (60-133)||(76276-76349)
[»] scaffold0016 (1 HSPs)
scaffold0016 (60-113)||(200137-200189)
[»] scaffold0013 (1 HSPs)
scaffold0013 (60-133)||(129157-129230)
[»] scaffold0151 (1 HSPs)
scaffold0151 (56-108)||(14204-14255)
[»] scaffold0509 (2 HSPs)
scaffold0509 (70-133)||(1293-1356)
scaffold0509 (70-133)||(7721-7784)
[»] scaffold0304 (1 HSPs)
scaffold0304 (70-133)||(5853-5916)
[»] scaffold0190 (1 HSPs)
scaffold0190 (56-111)||(7440-7495)
[»] scaffold0216 (1 HSPs)
scaffold0216 (67-133)||(20041-20107)
[»] scaffold0077 (1 HSPs)
scaffold0077 (56-102)||(12351-12397)
[»] scaffold0053 (1 HSPs)
scaffold0053 (67-133)||(45304-45370)
[»] scaffold0040 (1 HSPs)
scaffold0040 (67-133)||(41330-41396)
[»] scaffold0005 (1 HSPs)
scaffold0005 (70-128)||(63774-63832)
[»] scaffold0100 (1 HSPs)
scaffold0100 (56-133)||(8980-9056)


Alignment Details
Target: chr7 (Bit Score: 232; Significance: 1e-128; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 19 - 281
Target Start/End: Original strand, 10478212 - 10478475
Alignment:
19 attcatacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgaga 118  Q
    ||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
10478212 attcatacattttgacttgtaactcgtttctctctaaatgtggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgaga 10478311  T
119 aacttctattaatactagaaaaactacctacacatagaaatttgatactataactgctaataatggttacgaacacctcttcgatttgaaattcaaatgg 218  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
10478312 aacttctattaatactagaaaaactacctacacatagaaatgtgatactataactgttaacaatggttacgaacacctcttcgatttgaaattcaaatgg 10478411  T
219 cattcctt-aaagcatctgttaattgtctttatctgaaaccaacttgtacttcgacatcttctt 281  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
10478412 cattccttgaaagcatctgttaattgtctttatctgaaaccaacttgtacttcgacatcttctt 10478475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 18 - 140
Target Start/End: Complemental strand, 18450895 - 18450773
Alignment:
18 aattcatacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgag 117  Q
    |||||||||||| |||||||| |||||||| | |||||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||| ||| |    
18450895 aattcatacattatgacttgttactcgtttctctctaaatgcgaatagtttaagtgtaagttttctgtatggttgaattgtgacctgtttttcccatggg 18450796  T
118 aaacttctattaatactagaaaa 140  Q
    |||||  |||| |||||||||||    
18450795 aaactaatatttatactagaaaa 18450773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 135
Target Start/End: Original strand, 41239245 - 41239360
Alignment:
19 attcatacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgaga 118  Q
    ||||||||||| |||||||| |||||||| | ||| ||| ||||||||||||| ||||||||| |||||| |||||||||||||| ||||| |||||| |    
41239245 attcatacattgtgacttgttactcgtttctctctgaatccggatagtttgagcgtaagttttatgtatgattgaattgtgaccc-ttttttctatgaaa 41239343  T
119 aacttctattaatacta 135  Q
    ||||  |||| ||||||    
41239344 aactagtatttatacta 41239360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 16713294 - 16713383
Alignment:
19 attcatacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttt 108  Q
    ||||||||||  |||||| | |||||||| | ||| ||||| ||||||||||||||| |||||||||||| |||||||||||||| ||||    
16713294 attcatacatcgtgacttattactcgtttctctctgaatgcagatagtttgagtgtacgttttctgtatgattgaattgtgacccttttt 16713383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 17687530 - 17687619
Alignment:
19 attcatacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttt 108  Q
    ||||||||||  |||||| | |||||||| | ||| ||||| ||||||||||||||| |||||||||||| |||||||||||||| ||||    
17687530 attcatacatcgtgacttattactcgtttctctctgaatgcagatagtttgagtgtacgttttctgtatgattgaattgtgacccttttt 17687619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 18174933 - 18174999
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| |||||||||||||||||||||||| || ||||| ||||| ||||    
18174933 ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac 18174999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 109
Target Start/End: Original strand, 24876425 - 24876478
Alignment:
56 atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgttttt 109  Q
    ||||||||| |||||||||||||||| |||||| |||||||||||||| |||||    
24876425 atgcggataatttgagtgtaagttttttgtatgattgaattgtgaccctttttt 24876478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 59 - 133
Target Start/End: Original strand, 11989458 - 11989533
Alignment:
59 cggatagt-ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||| |||||||||||||||  ||||| |||||||||||||| ||||||||| || ||||| ||||| ||||    
11989458 cggatagtattgagtgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaactactatttatac 11989533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 102
Target Start/End: Original strand, 40342912 - 40342958
Alignment:
56 atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacc 102  Q
    ||||||||| |||||||||||||||| |||||| |||||||||||||    
40342912 atgcggataatttgagtgtaagttttttgtatgattgaattgtgacc 40342958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 111
Target Start/End: Original strand, 10827855 - 10827910
Alignment:
56 atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcc 111  Q
    ||||||||| |||||||||||||||| |||||| ||| | |||||||| |||||||    
10827855 atgcggataatttgagtgtaagttttgtgtatgattggactgtgacccttttttcc 10827910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 111
Target Start/End: Original strand, 11021647 - 11021702
Alignment:
56 atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcc 111  Q
    ||||||||| |||||||||||||||| |||||| ||| | |||||||| |||||||    
11021647 atgcggataatttgagtgtaagttttgtgtatgattggactgtgacccttttttcc 11021702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 1978290 - 1978356
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||| ||||  ||||| ||||||||||||||||||| |||| || ||||| ||||| ||||    
1978290 ttgagtgtaaattttgagtatgattgaattgtgacccgttttccctaagaaaaactactatttatac 1978356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 14035939 - 14036005
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| |||| ||||||||| ||||||||| || ||||| ||||| ||||    
14035939 ttgagtgtaagtttttagtatgattgagttgtgacccttttttcctaagaaaaactactatttatac 14036005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 14345969 - 14346035
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| |||| ||||||||| ||||||||| || ||||| ||||| ||||    
14345969 ttgagtgtaagtttttagtatgattgagttgtgacccttttttcctaagaaaaactactatttatac 14346035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 15758624 - 15758558
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| |||||||||||||  ||||||||| || ||||| ||||| ||||    
15758624 ttgagtgtaagttttgagtatgattgaattgtgacctctttttcctaagaaaaactactatttatac 15758558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 18115295 - 18115360
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| |||||||||||||| ||||||||| || ||||| ||||| ||||    
18115295 ttgagtgtaagtttta-gtatgattgaattgtgacccttttttcctaagaaaaactactatttatac 18115360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 18141863 - 18141928
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| |||||||||||||| ||||||||| || ||||| ||||| ||||    
18141863 ttgagtgtaagtttta-gtatgattgaattgtgacccttttttcctaagaaaaactactatttatac 18141928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 112; Significance: 1e-56; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 23 - 279
Target Start/End: Complemental strand, 13101935 - 13101679
Alignment:
23 atacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaact 122  Q
    |||||||| |||||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
13101935 atacatttcgacttgtaactcgtttctctctaaatgcggatagtttgagtgtatgttttctgtatggttgaactgtgacccgtttttcctatgagaaact 13101836  T
123 tctattaatactagaaaaactacctacacatagaaatttgatactataactgctaataatggttacga-acacctcttcgatttgaaattcaaatggcat 221  Q
     ||||| ||||||| ||||||||||||||||||| |||||| |||||||||||||  || || | ||| |||||||||||||||||| ||| ||  ||||    
13101835 gctatttatactag-aaaactacctacacatagacatttgaaactataactgctacgaacgg-tccgagacacctcttcgatttgaatttcgaa-agcat 13101739  T
222 tcctt-aaagcatctgttaattg-tctttatctgaaaccaacttgtacttcgacatcttc 279  Q
     | || | || ||| |||| |||  ||||||||||||| ||||||| |||||||||||||    
13101738 cctttgatagtatccgttatttgaactttatctgaaactaacttgttcttcgacatcttc 13101679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 18 - 229
Target Start/End: Original strand, 14345594 - 14345804
Alignment:
18 aattcatacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgag 117  Q
    ||||||||||||||||||| |||||||||| | |||||||| ||||||||||||  |||||||||||| | |||||||||||||||||||||||||||||    
14345594 aattcatacattttgacttataactcgtttctctctaaatgtggatagtttgagcataagttttctgtgtagttgaattgtgacccgtttttcctatgag 14345693  T
118 aaacttctattaatactagaaaaactacctacacatagaaatttgatactataactgctaataatggttacgaacacctcttcgatttgaaattcaaatg 217  Q
    ||| || |||| ||||||| |||||||| |||||||||| ||| || ||||||||||||| |||    || |||| |||||| | |||||||||||||||    
14345694 aaatttatatttatactag-aaaactacttacacatagacattagaaactataactgctactaacatctaggaactcctcttggctttgaaattcaaatg 14345792  T
218 gcattccttaaa 229  Q
    |||||| |||||    
14345793 gcattcgttaaa 14345804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 19 - 226
Target Start/End: Original strand, 55002384 - 55002590
Alignment:
19 attcatacattttgacttgtaa-ctcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgag 117  Q
    ||||||||||| |||||||||| ||| | | | ||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||| || ||||    
55002384 attcatacattgtgacttgtaaactcatctgtctctaaatgcggatagtttgcgtgtaagttttttgtatgattgaattgtgacccgttttt-ctttgag 55002482  T
118 aaacttctattaatactagaaaaactacctacacatagaaatttgatactataactgctaataatggttacgaacacctcttcgatttgaaattcaaatg 217  Q
    ||||| ||||| ||||||| |||||||| | ||||||||||||||| ||||||||||| | ||| ||| |  ||||||||||| | || ||||||||||     
55002483 aaactgctatttatactag-aaaactacatgcacatagaaatttgaaactataactgccactaaaggtcagaaacacctcttcaacttaaaattcaaata 55002581  T
218 gcattcctt 226  Q
     ||||||||    
55002582 acattcctt 55002590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 19 - 152
Target Start/End: Complemental strand, 14133416 - 14133285
Alignment:
19 attcatacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgaga 118  Q
    ||||||||||| |||||||| |||||||| | ||| |||||||||||||||||| |||||||| | |||| |||||||||||| |||||||| ||||| |    
14133416 attcatacattgtgacttgttactcgtttctctctgaatgcggatagtttgagtataagtttt-tttatgattgaattgtgactcgtttttcttatgaaa 14133318  T
119 aacttctattaatactagaaaaactacctacaca 152  Q
    ||||  |||| |||||| |  |||||||||||||    
14133317 aactattatttatacta-agtaactacctacaca 14133285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 10139826 - 10139760
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| |||||||||||||||||||||||| || ||||| ||||| ||||    
10139826 ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac 10139760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 128
Target Start/End: Complemental strand, 10171193 - 10171132
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctatt 128  Q
    |||||||||||||||  ||||| |||||||||||||||||||||||| || ||||| |||||    
10171193 ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatt 10171132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 67 - 135
Target Start/End: Original strand, 1934709 - 1934777
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatacta 135  Q
    ||||||||||||||| | |||| |||||||||||||  |||||||||||| ||||| ||||| ||||||    
1934709 ttgagtgtaagttttatatatgattgaattgtgacctatttttcctatgaaaaactactatttatacta 1934777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 13299533 - 13299599
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| |||||||||||||| ||||||||| || ||||| ||||| ||||    
13299533 ttgagtgtaagtttttagtatgattgaattgtgacccctttttcctaagaaaaactactatttatac 13299599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 13310191 - 13310257
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| |||||||||||||| ||||||||| || ||||| ||||| ||||    
13310191 ttgagtgtaagtttttagtatgattgaattgtgacccctttttcctaagaaaaactactatttatac 13310257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 14683217 - 14683283
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| |||||||||||||| ||||||||| || ||||| ||||| ||||    
14683217 ttgagtgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaactactatttatac 14683283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 102
Target Start/End: Original strand, 43135641 - 43135687
Alignment:
56 atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacc 102  Q
    ||||||||| |||||||||||||||| |||||| |||||||||||||    
43135641 atgcggataatttgagtgtaagttttttgtatgattgaattgtgacc 43135687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 122
Target Start/End: Complemental strand, 13023940 - 13023884
Alignment:
66 tttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaact 122  Q
    ||||||||||||||||  ||||| |||||||||||||| ||||||||| || |||||    
13023940 tttgagtgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaact 13023884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 113
Target Start/End: Original strand, 132520 - 132567
Alignment:
66 tttgagtgtaagttttctgtatggttgaattgtgacccgtttttccta 113  Q
    |||| ||||||||||| |||||| |||||||||||||| |||||||||    
132520 tttgcgtgtaagttttttgtatgattgaattgtgacccttttttccta 132567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 133
Target Start/End: Original strand, 12021543 - 12021610
Alignment:
66 tttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    ||||||||||||||||  ||||| |||||||||||||  ||||||||| || ||||| ||||| ||||    
12021543 tttgagtgtaagtttttagtatgattgaattgtgacctctttttcctaagaaaaactactatttatac 12021610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 133
Target Start/End: Complemental strand, 12491979 - 12491916
Alignment:
70 agtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    ||||||||||||  ||||| |||||||||||||| ||||||||| || ||||| ||||| ||||    
12491979 agtgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaactactatttatac 12491916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 128
Target Start/End: Original strand, 12844631 - 12844700
Alignment:
59 cggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctatt 128  Q
    |||| |||||||| |||||||||  ||||| |||||||||||||| |||| |||| || ||||| |||||    
12844631 cggacagtttgagcgtaagtttttagtatgattgaattgtgacccattttccctaagaaaaactactatt 12844700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 135
Target Start/End: Original strand, 13905960 - 13906040
Alignment:
57 tgcggatagtttgagtgt--aagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatacta 135  Q
    |||||||||||| |||||  ||||||| ||| |   |||||||||||||||||||||||||| |||||  |||| ||||||    
13905960 tgcggatagttttagtgtgtaagttttgtgtgtatgtgaattgtgacccgtttttcctatgaaaaactcttatttatacta 13906040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 104; Significance: 7e-52; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 18 - 221
Target Start/End: Original strand, 19859599 - 19859801
Alignment:
18 aattcatacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgag 117  Q
    ||||||||||||  |||||||||||||||| | | || |||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
19859599 aattcatacattgggacttgtaactcgtttctctttagatgttgatagtttgagtgtaagttttctgtattgttgaattgtgacccgtttttcctatgag 19859698  T
118 aaacttctattaatactagaaaaactacctacacatagaaatttgatactataactgctaataatggttacgaacacctcttcgatttgaaattcaaatg 217  Q
    |||||  |||| ||||||| ||||||| |||||||| || | | || |||||||||||||  ||  |||||||||||| |||||||||||||||||||||    
19859699 aaactgatatttatactag-aaaactagctacacatggacactcgaaactataactgctaccaacagttacgaacaccacttcgatttgaaattcaaatg 19859797  T
218 gcat 221  Q
    ||||    
19859798 gcat 19859801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 19 - 260
Target Start/End: Complemental strand, 19212489 - 19212248
Alignment:
19 attcatacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgaga 118  Q
    |||| ||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||| | |||| ||||||||||||| ||||||||||||| |    
19212489 attcgtacattttgatgtgtaactcgtttatctctaaatgcggatagtttgagtgtaagttttttatatgattgaattgtgacctgtttttcctatgaaa 19212390  T
119 aacttctattaatactagaaaaactacctacacatagaaatttgatactataactgctaataatggttacgaacacctcttcgatttgaaattcaaatgg 218  Q
    ||||  |||| ||  ||| ||||||| ||||||||| | ||| || || |||||||||| ||| || || |||||  | || | |||||||||||||||     
19212389 aactgatatttattatag-aaaactaactacacataaacattcgaaacaataactgctactaacggctatgaacatatgttggctttgaaattcaaatga 19212291  T
219 cattcctt-aaagcatctgttaattgtctttatctgaaaccaa 260  Q
    |||||||| |||||| | |||| ||| ||||||||| ||||||    
19212290 cattccttcaaagcaaccgttatttggctttatctgtaaccaa 19212248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 59 - 133
Target Start/End: Complemental strand, 21530378 - 21530303
Alignment:
59 cggatagt-ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||| |||||||||||||||  ||||| |||||||||||||||||||||||| || ||||||||||| ||||    
21530378 cggatagtattgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaacttctatttatac 21530303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 21504702 - 21504636
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| |||||||||||||||||||||||| || ||||||||||| ||||    
21504702 ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaacttctatttatac 21504636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 26274165 - 26274231
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| |||||||||||||||||||||||| || ||||||||||| ||||    
26274165 ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaacttctatttatac 26274231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 133
Target Start/End: Original strand, 20024511 - 20024587
Alignment:
56 atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    ||||||||| |||||||||||||||| |||||| |||||||||||||| |||| | || |||||||| ||||| ||||    
20024511 atgcggataatttgagtgtaagtttt-tgtatgattgaattgtgaccctttttccttaagagaaactactatttatac 20024587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 20506387 - 20506453
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| ||||||||||||| |||||||||| || ||||| ||||| ||||    
20506387 ttgagtgtaagttttgagtatgattgaattgtgacctgtttttcctaagaaaaactactatttatac 20506453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 20249266 - 20249335
Alignment:
19 attcatacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatg 88  Q
    ||||||||||| |||||||| || ||||| | ||| |||| ||||||||||||| |||||||| ||||||    
20249266 attcatacattgtgacttgttacccgtttctctctgaatgtggatagtttgagtataagttttttgtatg 20249335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 131
Target Start/End: Complemental strand, 10624381 - 10624306
Alignment:
56 atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgttttt-cctatgagaaacttctattaat 131  Q
    ||||||||| |||||||||||||||| |||||| | |||||||||||| ||||| |||| || ||||| ||||||||    
10624381 atgcggataatttgagtgtaagtttt-tgtatgatagaattgtgacccttttttccctaggaaaaactactattaat 10624306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 102
Target Start/End: Complemental strand, 18156220 - 18156174
Alignment:
56 atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacc 102  Q
    ||||||||| |||||||||||||||| |||||| ||| |||||||||    
18156220 atgcggataatttgagtgtaagttttgtgtatgattggattgtgacc 18156174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 23656603 - 23656553
Alignment:
58 gcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttt 108  Q
    |||||| ||||||| ||||||||||  ||||||||||||||||||| ||||    
23656603 gcggattgtttgagcgtaagttttcactatggttgaattgtgacccatttt 23656553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 23801967 - 23802017
Alignment:
58 gcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttt 108  Q
    |||||| ||||||| ||||||||||  ||||||||||||||||||| ||||    
23801967 gcggattgtttgagcgtaagttttcactatggttgaattgtgacccatttt 23802017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 16832186 - 16832141
Alignment:
55 aatgcggatagtttgagtgtaagttttctgtatggttgaattgtga 100  Q
    |||||||||| |||||||||||||||| |||||| ||| |||||||    
16832186 aatgcggataatttgagtgtaagttttgtgtatgattggattgtga 16832141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 128
Target Start/End: Original strand, 21982681 - 21982742
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctatt 128  Q
    |||||||||||||||  ||||| |||||||||||||  ||||||||| || ||||| |||||    
21982681 ttgagtgtaagtttttagtatgattgaattgtgacctatttttcctaagaaaaactactatt 21982742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 135
Target Start/End: Original strand, 17432676 - 17432795
Alignment:
19 attcatacattt-tgacttgtaactcgtttatatctaaatgcggatagtttgagtgt--aagttttctgtatggttgaattgtgacccgtttttcctatg 115  Q
    |||||||||||| | |||||| |||||||| |   | ||||| ||||||||||||||  ||||||| ||| || ||||||||||| ||||||||  ||||    
17432676 attcatacatttgttacttgttactcgtttctccttgaatgcagatagtttgagtgtgtaagttttgtgtgtgattgaattgtgaaccgtttttaatatg 17432775  T
116 agaaacttctattaatacta 135  Q
    | |||||  |||| ||||||    
17432776 aaaaactattatttatacta 17432795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 19749875 - 19749823
Alignment:
169 taactgctaataatggttacgaacacctcttcgatttgaaattcaaatggcat 221  Q
    ||||||||| |||||| ||  ||||||||||| ||||||||||||||| ||||    
19749875 taactgctactaatggctataaacacctcttcaatttgaaattcaaatagcat 19749823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 2e-40; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 22698752 - 22698907
Alignment:
19 attcatacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgaga 118  Q
    ||||||||||||||| ||||||||| ||| | |||| ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
22698752 attcatacattttgatttgtaactcatttctctctacatgcggataatttgagtgtaagttttctgtatggttgaattgtgacccttttttcctatgaga 22698851  T
119 aacttctattaatactagaaaaactacctacacatagaaatttgatactataactgc 175  Q
    ||||  |||| ||||||  ||||||||||| ||||||| ||| || || ||||||||    
22698852 aactgttatttatacta-caaaactacctatacatagacattcgaaaccataactgc 22698907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 18846863 - 18846665
Alignment:
19 attcatacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgaga 118  Q
    ||||||||||| |||||||| |||||||| | |||| || |||||||||| ||||||||||||||||||||||||||| | || ||||||| ||||||||    
18846863 attcatacattctgacttgttactcgtttctctctagatacggatagtttaagtgtaagttttctgtatggttgaattataactcgttttt-ctatgaga 18846765  T
119 aacttctattaatactagaaaaactacctacacatagaaatttgatactataactgctaataatggttacgaacacctcttcgatttgaaattcaaatgg 218  Q
    ||||  |||| ||| ||| ||||||||||||| | ||| ||| || ||  ||||||||| ||| || ||   |||||||||||||||||| || |||| |    
18846764 aactaatatttataatag-aaaactacctacatagagacattcgaaac--taactgctattaacggctatagacacctcttcgatttgaattttaaatag 18846668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 175
Target Start/End: Original strand, 17840057 - 17840212
Alignment:
19 attcatacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgaga 118  Q
    ||||||||||| |||||  |||||||||| | |||| ||| ||||||||| ||||| | |||||| ||||  || |||||||||| ||||| |||||| |    
17840057 attcatacattgtgactgataactcgtttctctctagatgtggatagtttaagtgtgaattttctatatgaatgtattgtgaccctttttttctatgaaa 17840156  T
119 aacttctattaatactagaaaaactacctacacatagaaatttgatactataactgc 175  Q
    || |  |||| |||||| ||||||||||| |||||||| |||||| |||||||||||    
17840157 aattgttatttatacta-aaaaactacctgcacatagacatttgaaactataactgc 17840212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 16778017 - 16777929
Alignment:
63 tagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatactagaaaaactacctacaca 152  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||  |||| |||||| |  |||||||||||||    
16778017 tagtttgagtgtaagttttctgtatgattgaattgtgatccgtttttcctatgaaaaactattatttatacta-agtaactacctacaca 16777929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 138
Target Start/End: Complemental strand, 15911826 - 15911707
Alignment:
20 ttcatacattttgacttgtaactcgtttatatcta-aatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgaga 118  Q
    |||||||||| | |||||| |||||||| | |||  ||||||||||||||||||||||||||| |||||| |||  ||||||||  |||| | ||||| |    
15911826 ttcatacattgtaacttgtgactcgtttctctcttgaatgcggatagtttgagtgtaagttttgtgtatgattggtttgtgacctattttccttatgaaa 15911727  T
119 aacttctattaatactagaa 138  Q
    |||| ||||| |||||||||    
15911726 aactactatttatactagaa 15911707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 56 - 133
Target Start/End: Complemental strand, 18735446 - 18735370
Alignment:
56 atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    ||||||||| |||||||||||||||| |||||| |||||||||||||| |||||| || |||||||| ||||| ||||    
18735446 atgcggataatttgagtgtaagtttt-tgtatgattgaattgtgacccttttttcttaagagaaactactatttatac 18735370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 17637891 - 17637949
Alignment:
19 attcatacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaag 77  Q
    ||||||||||| |||||||| |||||||| | ||| |||||||||||||||||||||||    
17637891 attcatacattgtgacttgttactcgtttctctctgaatgcggatagtttgagtgtaag 17637949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 22352085 - 22352151
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| |||||||||||||||||||||||| || ||||| ||||| ||||    
22352085 ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac 22352151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 22698159 - 22698216
Alignment:
56 atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttccta 113  Q
    ||||||||| |||||||||||||||| |||||| | |||||||||||| |||||||||    
22698159 atgcggataatttgagtgtaagttttttgtatgatagaattgtgacccttttttccta 22698216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 133
Target Start/End: Original strand, 29708237 - 29708304
Alignment:
66 tttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||| |||||||||  ||||| |||||||||||||||||||||||| || ||||| ||||| ||||    
29708237 tttgagcgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac 29708304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 17426168 - 17426234
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| |||||||||||||| ||||||||| || ||||| ||||| ||||    
17426168 ttgagtgtaagtttttagtatgattgaattgtgacccatttttcctaagaaaaactactatttatac 17426234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 133
Target Start/End: Original strand, 41438908 - 41438982
Alignment:
59 cggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||| |||||| |||||||||  ||||| |||||||||||||| ||||||||| || ||||| ||||| ||||    
41438908 cggatattttgagcgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaactactatttatac 41438982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 135
Target Start/End: Complemental strand, 23237266 - 23237186
Alignment:
57 tgcggatagtttgagtgt--aagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatacta 135  Q
    ||||||||||||||||||  ||||||| ||| |  ||||||||||||||||||||| ||||| |||||  |||| ||||||    
23237266 tgcggatagtttgagtgtgtaagttttgtgtgtatttgaattgtgacccgtttttcatatgaaaaactcttatttatacta 23237186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 133
Target Start/End: Complemental strand, 22064649 - 22064586
Alignment:
70 agtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    ||||||||||||  ||||| |||||||||||||| ||||||||| || ||||| ||||| ||||    
22064649 agtgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaactactatttatac 22064586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 16668026 - 16668092
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| |||||||||||||  ||||||||| || ||||| ||||| ||||    
16668026 ttgagtgtaagtttttagtatgattgaattgtgaccactttttcctaagaaaaactactatttatac 16668092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 108
Target Start/End: Original strand, 22456380 - 22456433
Alignment:
57 tgcggatagtttgagtgt--aagttttctgtatggttgaattgtgacccgtttt 108  Q
    ||||||||||||||||||  ||| |||| ||||| |||||||||||||||||||    
22456380 tgcggatagtttgagtgtttaagctttcggtatgtttgaattgtgacccgtttt 22456433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 25389054 - 25389120
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| |||||||||||||  ||||||||| || ||||| ||||| ||||    
25389054 ttgagtgtaagttttgagtatgattgaattgtgaccaatttttcctaagaaaaactactatttatac 25389120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 116
Target Start/End: Original strand, 13764589 - 13764634
Alignment:
71 gtgtaagttttctgtatggttgaattgtgacccgtttttcctatga 116  Q
    ||||||||||| ||| |  |||||||||||||||||||||||||||    
13764589 gtgtaagttttgtgtgtaattgaattgtgacccgtttttcctatga 13764634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 100
Target Start/End: Complemental strand, 15337388 - 15337344
Alignment:
56 atgcggatagtttgagtgtaagttttctgtatggttgaattgtga 100  Q
    ||||||||| |||||||||||||||| |||||| | |||||||||    
15337388 atgcggataatttgagtgtaagttttttgtatgatagaattgtga 15337344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 100
Target Start/End: Complemental strand, 15426453 - 15426409
Alignment:
56 atgcggatagtttgagtgtaagttttctgtatggttgaattgtga 100  Q
    ||||||||| |||||||||||||||| |||||| | |||||||||    
15426453 atgcggataatttgagtgtaagttttttgtatgatagaattgtga 15426409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 100
Target Start/End: Complemental strand, 15517757 - 15517713
Alignment:
56 atgcggatagtttgagtgtaagttttctgtatggttgaattgtga 100  Q
    ||||||||| |||||||||||||||| |||||| | |||||||||    
15517757 atgcggataatttgagtgtaagttttttgtatgatagaattgtga 15517713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 18 - 202
Target Start/End: Original strand, 15048 - 15233
Alignment:
18 aattcatacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcc-tatga 116  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||||| |||||||||||| ||| |||||||||||||||| |||||||| |||||    
15048 aattcatacattttgacttgtaactcgtttatctctagatgcggatagttttagtgtaagttttttgtctggttgaattgtgacctgtttttccttatga 15147  T
117 gaaactt-ctattaatactagaaaaactacctacacatagaaatttgatactataactgctaataatggttacgaacacctcttcga 202  Q
    |||| ||  |||| ||||||| |||||||| |||||||| | ||| || | ||||||| |||  || |||||||| |||||||||||    
15148 gaaaattgatatttatactag-aaaactacatacacataaacattcgaaaatataactactaccaacggttacgagcacctcttcga 15233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 6e-37; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 19 - 278
Target Start/End: Complemental strand, 18530659 - 18530398
Alignment:
19 attcatacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgaga 118  Q
    ||||||| |||||||||||||| || ||| | |||| |||||||||||||||||||||||||| |||||||||||||||||||  |||||||| |||  |    
18530659 attcatatattttgacttgtaaatcatttttttctagatgcggatagtttgagtgtaagttttttgtatggttgaattgtgacttgtttttccaatgtaa 18530560  T
119 aacttctattaatactagaaaaactacctacacatagaaattt-gatactataactgctaataatggttacgaacacctcttcgatttgaaattcaaatg 217  Q
    |||| ||||| ||||||||||||||||||  | | ||| |||| || |||| |||| | | ||| ||| |  ||||||||||||||||||||||||||      
18530559 aactgctatttatactagaaaaactacctttatagagatatttcgaaactacaactaccattaacggtgagaaacacctcttcgatttgaaattcaaa-a 18530461  T
218 gcattcctt-aaagcatctgttaattgtct-ttatctgaaaccaacttgtacttcgacatctt 278  Q
    ||||||||| | || || ||||| ||| || ||||||||||||||  | | ||||||||||||    
18530460 gcattccttgatagtatatgttacttgactcttatctgaaaccaatctttccttcgacatctt 18530398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 152
Target Start/End: Complemental strand, 21550636 - 21550504
Alignment:
19 attcatacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgaga 118  Q
    ||||||||||| |||||||| |||||||| | ||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |    
21550636 attcatacattgtgacttgttactcgtttctctctgaatgcggatagtttgagtgtaagttttctgtatgattgaattgtgatccgtttttcctatgaaa 21550537  T
119 aacttctattaatactagaaaaactacctacaca 152  Q
    |||| ||||| |||||| |  |||||||||||||    
21550536 aactactatttatacta-agtaactacctacaca 21550504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 59 - 133
Target Start/End: Complemental strand, 23511683 - 23511609
Alignment:
59 cggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    ||||||||||||| |||||||||  ||||| |||||||||||||||||||||||| || ||||| ||||| ||||    
23511683 cggatagtttgagcgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac 23511609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 1528720 - 1528786
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| ||||||||||||||||||||| || || ||||||||||| ||||    
1528720 ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcgtaagaaaaacttctatttatac 1528786  T

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Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 29305283 - 29305217
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| |||||||||||||||||||||||| || ||||| ||||| ||||    
29305283 ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac 29305217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 31845729 - 31845795
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| |||||||||||||||||||||||| || ||||| ||||| ||||    
31845729 ttgagtgtaagttttgagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac 31845795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 175
Target Start/End: Complemental strand, 9166056 - 9165944
Alignment:
62 atagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatactagaaaaactacctacacatagaaattt 161  Q
    ||||||||||||||| |||| |||| |||||||||||||||  ||||||| ||||||||   ||||| ||  || |||||||| |||| || ||| ||||    
9166056 atagtttgagtgtaaattttttgtagggttgaattgtgacctttttttcccatgagaaatggctatttattgta-aaaaactatctacgcacagacattt 9165958  T
162 gatactataactgc 175  Q
    || |||||||||||    
9165957 gaaactataactgc 9165944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 133
Target Start/End: Complemental strand, 21076633 - 21076559
Alignment:
59 cggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||| ||||||||||||||||  ||||| |||||||||||||  ||||||||| || ||||| ||||| ||||    
21076633 cggataatttgagtgtaagtttttagtatgattgaattgtgaccattttttcctaagaaaaactactatttatac 21076559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 133
Target Start/End: Complemental strand, 21137728 - 21137654
Alignment:
59 cggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    ||||||||||||| |||||||||  ||||| ||||||||||| | |||||||||| || ||||| ||||| ||||    
21137728 cggatagtttgagcgtaagtttttagtatgattgaattgtgaacagtttttcctaagaaaaactactatttatac 21137654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 21310794 - 21310728
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| |||||||||||||| ||||||||| || ||||| ||||| ||||    
21310794 ttgagtgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaactactatttatac 21310728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 22809134 - 22809180
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttccta 113  Q
    |||||||||||||||  ||||| ||||||||||||||||||||||||    
22809134 ttgagtgtaagtttttagtatgattgaattgtgacccgtttttccta 22809180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 27561963 - 27561897
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    ||||||||||||||| |||||  ||||||||||||| ||||||| || || ||||||||||| ||||    
27561963 ttgagtgtaagttttttgtattattgaattgtgacctgtttttcttaagaaaaacttctatttatac 27561897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 21168403 - 21168454
Alignment:
56 atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttt 108  Q
    ||||||||| |||||||||||||||| |||||| |||||||||||||| ||||    
21168403 atgcggataatttgagtgtaagtttt-tgtatgattgaattgtgacccttttt 21168454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 22509060 - 22509123
Alignment:
61 gatagtttgagtgt--aagttttctgtatggttgaattgtgacccgtttttcctatgagaaact 122  Q
    ||||||||||||||  ||||||| |||||| ||||||||||||| ||||||| ||||| |||||    
22509060 gatagtttgagtgtgtaagttttgtgtatgattgaattgtgacctgtttttcgtatgaaaaact 22509123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 113
Target Start/End: Original strand, 4229879 - 4229974
Alignment:
19 attcatacattttgacttgtaactcgtttatatctaa-atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttccta 113  Q
    |||||||||||   |||||| |||||||||| |||   |||||||||||||||| ||||||| | |||||| | |||||||||||| ||| |||||    
4229879 attcatacattgcaacttgtgactcgtttatctcttccatgcggatagtttgagcgtaagttatttgtatgatagaattgtgacccttttctccta 4229974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 133
Target Start/End: Complemental strand, 22086461 - 22086398
Alignment:
70 agtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    ||||||||||||  ||||| |||||||||||||| ||||||||| || ||||| ||||| ||||    
22086461 agtgtaagtttttagtatgattgaattgtgacccatttttcctaagaaaaactactatttatac 22086398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 102
Target Start/End: Original strand, 4361700 - 4361746
Alignment:
56 atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacc 102  Q
    ||||||||| ||||||| |||||||| |||||| |||||||||||||    
4361700 atgcggataatttgagtataagttttttgtatgattgaattgtgacc 4361746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 113
Target Start/End: Complemental strand, 50826451 - 50826398
Alignment:
59 cggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttccta 113  Q
    |||||| |||||||||||||||| |||||| ||||||||| |||| |||||||||    
50826451 cggataatttgagtgtaagtttt-tgtatgattgaattgtaacccttttttccta 50826398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 9e-36; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 19 - 171
Target Start/End: Original strand, 25966209 - 25966360
Alignment:
19 attcatacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgaga 118  Q
    ||||||||||| |||||| |||||||||| | |||||||| |||||||||||| |||| |||||||||| |||||||| |||||| ||||||| | ||||    
25966209 attcatacattgtgacttttaactcgtttctctctaaatgtggatagtttgagcgtaaattttctgtattgttgaattctgacccctttttccaacgaga 25966308  T
119 aacttctattaatactagaaaaactacctacacatagaaatttgatactataa 171  Q
    ||||  |||| ||||||| ||||||||||||||||||| |||||| |||||||    
25966309 aactgttatttatactag-aaaactacctacacatagatatttgaaactataa 25966360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 19 - 152
Target Start/End: Complemental strand, 20442327 - 20442195
Alignment:
19 attcatacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgaga 118  Q
    ||||||||||| |||||||| |||||||||| ||| |||||||||||||||| ||||||||||||||||| ||||||||||||  | ||||||||||| |    
20442327 attcatacattgtgacttgttactcgtttatctctgaatgcggatagtttgattgtaagttttctgtatgattgaattgtgacatgcttttcctatgaaa 20442228  T
119 aacttctattaatactagaaaaactacctacaca 152  Q
    |||| ||||| |||||| |  |||||||||||||    
20442227 aactactatttatacta-agtaactacctacaca 20442195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 19 - 152
Target Start/End: Original strand, 23995683 - 23995815
Alignment:
19 attcatacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgaga 118  Q
    ||||||||||| |||||||| |||||||| | ||||||||| |||||||||||||||||||||||||||| ||||||||||||  ||||||||||| | |    
23995683 attcatacattgtgacttgttactcgtttctctctaaatgcagatagtttgagtgtaagttttctgtatgattgaattgtgacatgtttttcctataaaa 23995782  T
119 aacttctattaatactagaaaaactacctacaca 152  Q
    |||| ||||| |||||| |  |||||||||||||    
23995783 aactactatttatacta-agtaactacctacaca 23995815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 23 - 152
Target Start/End: Original strand, 30051929 - 30052057
Alignment:
23 atacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaact 122  Q
    ||||||| |||||||| |||||||| | ||| |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| || ||    
30051929 atacattgtgacttgttactcgtttctctctgaatgcggatagtttgagtgtaagttttctgtatgattgaattgtgacccatttttcctatgaaaagct 30052028  T
123 tctattaatactagaaaaactacctacaca 152  Q
     ||||| |||||| |  |||||||||||||    
30052029 actatttatacta-agtaactacctacaca 30052057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 23 - 152
Target Start/End: Original strand, 30142973 - 30143101
Alignment:
23 atacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaact 122  Q
    ||||||| |||||||| |||||||| | ||| |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| || ||    
30142973 atacattgtgacttgttactcgtttctctctgaatgcggatagtttgagtgtaagttttctgtatgattgaattgtgacccatttttcctatgaaaagct 30143072  T
123 tctattaatactagaaaaactacctacaca 152  Q
     ||||| |||||| |  |||||||||||||    
30143073 actatttatacta-agtaactacctacaca 30143101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 30089944 - 30090037
Alignment:
23 atacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatga 116  Q
    ||||||| |||||||| |||| ||| | ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
30089944 atacattgtgacttgttactcatttctctctgaatgcggatagtttgagtgtaagttttctgtatgattgaattgtgacccgtttttcctatga 30090037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 30126549 - 30126642
Alignment:
23 atacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatga 116  Q
    ||||||| |||||||| |||| ||| | ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
30126549 atacattgtgacttgttactcatttctctctgaatgcggatagtttgagtgtaagttttctgtatgattgaattgtgacccgtttttcctatga 30126642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 152
Target Start/End: Complemental strand, 20524252 - 20524118
Alignment:
18 aattcatacattttgacttgtaactcgtttatatct-aaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatga 116  Q
    ||||||||||||   |||||| |||||||| | ||| ||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||    
20524252 aattcatacattgcaacttgtgactcgtttttctcttaaatgcggatagtttgagtgtaagttttctgtatgattgaattgtgacatgtttttcctatga 20524153  T
117 gaaacttctattaatactagaaaaactacctacaca 152  Q
     |||||  |||| |||||| |  |||||||||||||    
20524152 aaaactattatttatacta-agtaactacctacaca 20524118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 135
Target Start/End: Original strand, 20281173 - 20281287
Alignment:
21 tcatacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaa 120  Q
    ||||||||| |||||||| |||||||| | ||| |||||||||||| ||||||||| |||||||||||  |||||||||||| |||||| || ||| |||    
20281173 tcatacattctgacttgttactcgtttctctctgaatgcggatagtatgagtgtaaattttctgtatgactgaattgtgacctgttttttctttgaaaaa 20281272  T
121 cttctattaatacta 135  Q
    || ||||| ||||||    
20281273 ctactatttatacta 20281287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 138
Target Start/End: Original strand, 21905031 - 21905114
Alignment:
55 aatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatactagaa 138  Q
    |||| |||||||||||||||||||||| |||||| |||  |||||||| ||||| ||||||| |||||  |||| |||||||||    
21905031 aatgtggatagtttgagtgtaagttttttgtatgattggtttgtgacctgttttccctatgaaaaactattatttatactagaa 21905114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 24896698 - 24896632
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| |||||||||||||||||||||||| || ||||| ||||| ||||    
24896698 ttgagtgtaagttttgagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac 24896632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 25349334 - 25349392
Alignment:
55 aatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttccta 113  Q
    ||||||||||||||||||||||||||| |||||| ||  ||||||||||||||| ||||    
25349334 aatgcggatagtttgagtgtaagttttgtgtatgatttgattgtgacccgttttcccta 25349392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 133
Target Start/End: Original strand, 16664743 - 16664817
Alignment:
59 cggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    ||||||||||||| |||||||||  ||||| |||||||||||||| ||||| ||| || ||||| ||||| ||||    
16664743 cggatagtttgagcgtaagtttttagtatgattgaattgtgaccctttttttctaagaaaaactactatttatac 16664817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 102
Target Start/End: Original strand, 21256528 - 21256574
Alignment:
56 atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacc 102  Q
    ||||||||| |||||||||||||||| |||||| |||||||||||||    
21256528 atgcggataatttgagtgtaagttttttgtatgattgaattgtgacc 21256574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 22648638 - 22648572
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| ||||||||||||| |||||||||| || ||||| ||||| ||||    
22648638 ttgagtgtaagtttttagtatgattgaattgtgacctgtttttcctaagaaaaactactatttatac 22648572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 23190323 - 23190389
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||| | |||||||||||||||||||||||| || ||||| ||||| ||||    
23190323 ttgagtgtaagtttttagtacgattgaattgtgacccgtttttcctaagaaaaactactatttatac 23190389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 23203939 - 23204005
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||| | |||||||||||||||||||||||| || ||||| ||||| ||||    
23203939 ttgagtgtaagtttttagtacgattgaattgtgacccgtttttcctaagaaaaactactatttatac 23204005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 23611578 - 23611644
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||| | |||||||||||||||||||||||| || ||||| ||||| ||||    
23611578 ttgagtgtaagtttttagtacgattgaattgtgacccgtttttcctaagaaaaactactatttatac 23611644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 24967594 - 24967528
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| |||||||||||||| ||||||||| || ||||| ||||| ||||    
24967594 ttgagtgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaactactatttatac 24967528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 39227522 - 39227588
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| |||||||||||||| ||||||||| || ||||| ||||| ||||    
39227522 ttgagtgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaactactatttatac 39227588  T

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Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 34827685 - 34827741
Alignment:
56 atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttccta 113  Q
    |||| |||| |||||||||||||||| |||||| |||||||||||||| |||||||||    
34827685 atgcagataatttgagtgtaagttttttgtatgattgaattgtgaccc-tttttccta 34827741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 103
Target Start/End: Original strand, 10480459 - 10480507
Alignment:
55 aatgcggatagtttgagtgtaagttttctgtatggttgaattgtgaccc 103  Q
    ||||||||||||| ||||||||||||| |||||| ||| ||||||||||    
10480459 aatgcggatagttcgagtgtaagttttgtgtatgattggattgtgaccc 10480507  T

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Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 115
Target Start/End: Original strand, 23769406 - 23769502
Alignment:
20 ttcatacattttgacttgtaactcgtttatatcta-aatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatg 115  Q
    |||||||||| | |||||| |||||||| | |||  |||||||||| ||||||||||| |||| |||||| ||   || ||||||||||||||||||    
23769406 ttcatacattgtaacttgtgactcgtttctctcttgaatgcggataatttgagtgtaaattttgtgtatgattagtttatgacccgtttttcctatg 23769502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 103
Target Start/End: Complemental strand, 22593817 - 22593770
Alignment:
56 atgcggatagtttgagtgtaagttttctgtatggttgaattgtgaccc 103  Q
    ||||| ||| |||||||||||||||| |||||| ||||||||||||||    
22593817 atgcgcataatttgagtgtaagttttttgtatgattgaattgtgaccc 22593770  T

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Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 22633889 - 22633823
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| ||||||||||||| |||||||| | || ||||| ||||| ||||    
22633889 ttgagtgtaagtttttagtatgattgaattgtgacctgtttttccaaagaaaaactactatttatac 22633823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 23615183 - 23615249
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| |||||||||||||  ||||||||| || ||||| ||||| ||||    
23615183 ttgagtgtaagtttttagtatgattgaattgtgacctatttttcctaagaaaaactactatttatac 23615249  T

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Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 133
Target Start/End: Complemental strand, 31817988 - 31817914
Alignment:
59 cggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    ||||||||||||| |||| ||||  ||| | ||||||||||||||||||||| || || ||||| ||||| ||||    
31817988 cggatagtttgagcgtaaatttttagtacgattgaattgtgacccgtttttcataagaaaaactactatttatac 31817914  T

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Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 102
Target Start/End: Original strand, 23870590 - 23870626
Alignment:
66 tttgagtgtaagttttctgtatggttgaattgtgacc 102  Q
    |||||||||||||||| |||||| |||||||||||||    
23870590 tttgagtgtaagttttttgtatgattgaattgtgacc 23870626  T

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Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 110
Target Start/End: Original strand, 25118979 - 25119034
Alignment:
57 tgcggatagtttgag--tgtaagttttctgtatggttgaattgtgacccgtttttc 110  Q
    |||||||||||||||  |||||| |||| ||||| |||||||||||||| ||||||    
25118979 tgcggatagtttgagcgtgtaagctttcggtatgtttgaattgtgacccatttttc 25119034  T

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Target: scaffold0035 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 19 - 152
Target Start/End: Original strand, 25774 - 25906
Alignment:
19 attcatacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgaga 118  Q
    ||||||||||| |||||||| |||| ||| | |||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||| |    
25774 attcatacattgtgacttgttactcatttctctctaaatgcggataatttaagtgtaagttttctgtatgattgaattgtgacccgtttttcctatgaaa 25873  T
119 aacttctattaatactagaaaaactacctacaca 152  Q
    |||| ||||| |||||| |  |||||||||||||    
25874 aactactatttatacta-agtaactacctacaca 25906  T

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Target: scaffold1496 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold1496
Description:

Target: scaffold1496; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 19 - 152
Target Start/End: Complemental strand, 1510 - 1378
Alignment:
19 attcatacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgaga 118  Q
    ||||||||||| |||||||| |||||||| | ||  ||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||| |    
1510 attcatacattctgacttgttactcgtttctctccgaatgcagatagtttgagtgtaagttttccgtatgattgaattgtgacccgtttttcttatgaaa 1411  T
119 aacttctattaatactagaaaaactacctacaca 152  Q
    |||| ||||| |||||| |  |||||||||||||    
1410 aactactatttatacta-agtaactacctacaca 1378  T

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Target: scaffold0171 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 26949 - 27053
Alignment:
19 attcatacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgaga 118  Q
    ||||||||| | ||||||||||||||||| | ||||||||| |||||||||| |||||||||| |||||||||||||||  ||| |||||||||||||||    
26949 attcatacagtgtgacttgtaactcgtttctctctaaatgcagatagtttgattgtaagttttttgtatggttgaattgcaacctgtttttcctatgaga 27048  T
119 aactt 123  Q
    |||||    
27049 aactt 27053  T

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Target: scaffold0239 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 5650 - 5547
Alignment:
24 tacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaactt 123  Q
    |||||| |||||||| |||| ||| | ||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||| |||||     
5650 tacattgtgacttgttactcatttctctctgaatgcggatagtttgagtgtaagttttctatatgattgaattgtgacccgtttttcatatgaaaaacta 5551  T
124 ctat 127  Q
    ||||    
5550 ctat 5547  T

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Target: scaffold0239; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 65 - 1
Alignment:
19 attcatacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttct 83  Q
    |||| |||||| |||||||| |||| ||| | ||| |||||||||||||||||||||||||||||    
65 attcctacattgtgacttgttactcatttctctctgaatgcggatagtttgagtgtaagttttct 1  T

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Target: chr6 (Bit Score: 60; Significance: 1e-25; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 56 - 171
Target Start/End: Complemental strand, 20440808 - 20440693
Alignment:
56 atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatactagaaaaactacctacacatag 155  Q
    |||||||||||||||||||||||||||| ||||  || |||||||||  |||| |||||||||||||  |||| |||||| |||||||||||||||| ||    
20440808 atgcggatagtttgagtgtaagttttctatatgaatgtattgtgacctcttttccctatgagaaactgttatttatactaaaaaaactacctacacacag 20440709  T
156 aaatttgatactataa 171  Q
    | |||||| |||||||    
20440708 acatttgaaactataa 20440693  T

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Target: chr6; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 56 - 171
Target Start/End: Complemental strand, 20438185 - 20438070
Alignment:
56 atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatactagaaaaactacctacacatag 155  Q
    |||||| ||||||||||||||||||||| ||||  || |||||||||  |||| |||||||||||||  |||| |||||| |||||||||||||||| ||    
20438185 atgcgggtagtttgagtgtaagttttctatatgaatgtattgtgacctcttttccctatgagaaactgttatttatactaaaaaaactacctacacacag 20438086  T
156 aaatttgatactataa 171  Q
    | |||||| |||||||    
20438085 acatttgaaactataa 20438070  T

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Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 63 - 171
Target Start/End: Complemental strand, 20443371 - 20443263
Alignment:
63 tagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatactagaaaaactacctacacatagaaatttg 162  Q
    ||||||||||||||||||||| ||||  || | |||||||  |||| ||||||| |||||  |||| ||| || |||||||||||||||| ||| |||||    
20443371 tagtttgagtgtaagttttctatatgaatgtactgtgacctcttttccctatgaaaaactgttatttataataaaaaaactacctacacacagacatttg 20443272  T
163 atactataa 171  Q
    | |||||||    
20443271 aaactataa 20443263  T

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Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 56 - 171
Target Start/End: Complemental strand, 20450803 - 20450689
Alignment:
56 atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatactagaaaaactacctacacatag 155  Q
    |||||| ||||||||||||||||||||| | ||  || |||||||||  |||| ||||||| |||||  |||| ||| || |||||||||||||||| ||    
20450803 atgcggctagtttgagtgtaagttttctatttgaatgtattgtgacctcttttccctatgaaaaactgttatttataata-aaaaactacctacacacag 20450705  T
156 aaatttgatactataa 171  Q
    | |||||| |||||||    
20450704 acatttgaaactataa 20450689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 59 - 133
Target Start/End: Complemental strand, 23496622 - 23496547
Alignment:
59 cggatagt-ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||| |||||||||||||||  ||||| |||||||||||||||||||||||| || ||||| ||||| ||||    
23496622 cggatagtattgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac 23496547  T

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Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 133
Target Start/End: Complemental strand, 11794214 - 11794100
Alignment:
20 ttcatacattttgacttgtaactcgtttatatctaa-atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgaga 118  Q
    ||||||||||   |||||| | ||||||||||||   ||||||||| ||||||||||| |||| |||||  |||||||||||||| |||||||||||  |    
11794214 ttcatacattgcaacttgtgattcgtttatatcttccatgcggataatttgagtgtaaattttttgtataattgaattgtgacccttttttcctatggaa 11794115  T
119 aacttctattaatac 133  Q
    |||| ||||| ||||    
11794114 aactactatttatac 11794100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 19025458 - 19025524
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| ||||||||||||||||||||| || || ||||||||||| ||||    
19025458 ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcttaagaaaaacttctatttatac 19025524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 19038501 - 19038567
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| ||||||||||||||||||||| || || ||||||||||| ||||    
19038501 ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcttaagaaaaacttctatttatac 19038567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 23431975 - 23431909
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| |||||||||||||||||||||||| || ||||| ||||| ||||    
23431975 ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac 23431909  T

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Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 23491015 - 23490949
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| |||||||||||||||||||||||| || ||||| ||||| ||||    
23491015 ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac 23490949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 30755597 - 30755663
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| |||||||||||||||||||||||| || ||||| ||||| ||||    
30755597 ttgagtgtaagttttgagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac 30755663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 16209858 - 16209792
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| ||||| |||||||||||||||||| || ||||| ||||| ||||    
16209858 ttgagtgtaagtttttagtatgattgaactgtgacccgtttttcctaagaaaaactactatttatac 16209792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 19405854 - 19405920
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| |||||||||||||| ||||||||| || ||||| ||||| ||||    
19405854 ttgagtgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaactactatttatac 19405920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 108
Target Start/End: Original strand, 17813180 - 17813229
Alignment:
59 cggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttt 108  Q
    ||||| ||||||| |||||||||| ||||||||||||||||||| |||||    
17813180 cggattgtttgagcgtaagttttcagtatggttgaattgtgacctgtttt 17813229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 215
Target Start/End: Complemental strand, 20434453 - 20434293
Alignment:
56 atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatactagaaaaactacctacacatag 155  Q
    |||| |||||||||||| |||||||||| ||||  ||  ||||||||  |||| ||||||| |||||  |||| ||||   ||||| |||||||||| ||    
20434453 atgctgatagtttgagtataagttttctatatgaatgtgttgtgacctcttttccctatgaaaaactgttatttatacggaaaaaattacctacacacag 20434354  T
156 aaatttgatactataactgctaataatgg-ttacgaacacctcttcgatttgaaattcaaa 215  Q
    | |||||| ||||||| ||  | ||| ||  ||| |||| |||||||||||||| ||||||    
20434353 acatttgaaactataattgtcactaacggcctacaaacatctcttcgatttgaatttcaaa 20434293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 171
Target Start/End: Complemental strand, 20445928 - 20445818
Alignment:
63 tagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatact--agaaaaactacctacacatagaaatt 160  Q
    ||||||||||||||||||||| ||||  || | |||||||  |||| ||||||| |||||  |||| ||| |  | |||||||||||||||| ||| |||    
20445928 tagtttgagtgtaagttttctatatgaatgtactgtgacctcttttccctatgaaaaactgttatttataataaaaaaaaactacctacacacagacatt 20445829  T
161 tgatactataa 171  Q
    ||| |||||||    
20445828 tgaaactataa 20445818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 26460609 - 26460692
Alignment:
20 ttcatacattttgacttgtaactcgtttatatctaa-atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacc 102  Q
    ||||||||||   |||||| |||||||||| |||   ||||||||| |||||||||||||||| |||||| ||| |||||||||    
26460609 ttcatacattgcaacttgtgactcgtttatctcttccatgcggataatttgagtgtaagttttgtgtatgattggattgtgacc 26460692  T

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Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 1557751 - 1557817
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| |||||||||||||  ||||||||| || ||||| ||||| ||||    
1557751 ttgagtgtaagttttgagtatgattgaattgtgacctctttttcctaagaaaaactactatttatac 1557817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 23598141 - 23598179
Alignment:
66 tttgagtgtaagttttctgtatggttgaattgtgacccg 104  Q
    |||||| |||||||||| |||||||||||||||||||||    
23598141 tttgagcgtaagttttcagtatggttgaattgtgacccg 23598179  T

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Target: chr4 (Bit Score: 51; Significance: 3e-20; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 152
Target Start/End: Original strand, 27812386 - 27812483
Alignment:
54 aaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatactagaaaaactacctacaca 152  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| | ||| |||||  |||| |||||| |  |||||||||||||    
27812386 aaatgcggataatttgagtgtaagttttctgtatgattgaattgtgacccgtttttcatgtgaaaaactattatttatacta-agcaactacctacaca 27812483  T

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Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 50687649 - 50687552
Alignment:
20 ttcatacattttgacttgtaactcgtttatatcta-aatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatga 116  Q
    |||||||||| | |||||| |||||||| | |||  |||||||||||  |||||||||||||| |||||| |||  ||||||||||||||||||||||    
50687649 ttcatacattataacttgtgactcgtttgtctcttgaatgcggatagcctgagtgtaagttttgtgtatgattggtttgtgacccgtttttcctatga 50687552  T

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Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 56 - 112
Target Start/End: Original strand, 31079821 - 31079877
Alignment:
56 atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcct 112  Q
    ||||||||| |||||||||||||||| |||||| |||||||||||||| ||||||||    
31079821 atgcggataatttgagtgtaagttttttgtatgattgaattgtgacccctttttcct 31079877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 13277290 - 13277356
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| ||||||||||||| |||||||||| || ||||| ||||| ||||    
13277290 ttgagtgtaagtttttagtatgattgaattgtgacctgtttttcctaagaaaaactactatttatac 13277356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 18108755 - 18108689
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| |||||||||||||| ||||||||| || ||||| ||||| ||||    
18108755 ttgagtgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaactactatttatac 18108689  T

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Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 113
Target Start/End: Original strand, 14022497 - 14022544
Alignment:
66 tttgagtgtaagttttctgtatggttgaattgtgacccgtttttccta 113  Q
    ||||||||||||||||  ||||| |||||||||||||| |||||||||    
14022497 tttgagtgtaagtttttagtatgattgaattgtgacccttttttccta 14022544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 57 - 135
Target Start/End: Original strand, 22271926 - 22272007
Alignment:
57 tgcggatagtttga---gtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatacta 135  Q
    ||||||||||||||   ||||||||||| ||| |   |||||||||||||||||||||||||| |||||  |||| ||||||    
22271926 tgcggatagtttgaagtgtgtaagttttatgtgtatgtgaattgtgacccgtttttcctatgaaaaactcttatttatacta 22272007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 13292668 - 13292734
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| ||||||||||||  |||||||||| || ||||| ||||| ||||    
13292668 ttgagtgtaagtttttagtatgattgaattgtgacatgtttttcctaagaaaaactactatttatac 13292734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 14714218 - 14714276
Alignment:
70 agtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctatt 128  Q
    ||||||| ||||  ||||| |||||||||||||||||||||||| || ||||| |||||    
14714218 agtgtaaatttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatt 14714276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 14775898 - 14775956
Alignment:
70 agtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctatt 128  Q
    ||||||| ||||  ||||| |||||||||||||||||||||||| || ||||| |||||    
14775898 agtgtaaatttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatt 14775956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 49526523 - 49526581
Alignment:
55 aatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttccta 113  Q
    |||||||||||||||| |||||||||| |||||| ||| ||||| |||| |||| ||||    
49526523 aatgcggatagtttgattgtaagttttgtgtatgattggattgtcaccctttttcccta 49526581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 138
Target Start/End: Original strand, 8803 - 8922
Alignment:
20 ttcatacattttgacttgtaactcgtttatatcta-aatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgaga 118  Q
    |||||||||| | |||||| |||||||| | |||  |||| |||||||||||||||||||||| |||||| ||| ||||||||||||||| | ||||  |    
8803 ttcatacattgtaacttgtgactcgtttctctcttgaatgtggatagtttgagtgtaagttttgtgtatgattggattgtgacccgttttccttatggaa 8902  T
119 aacttctattaatactagaa 138  Q
    |||| ||||| |||||||||    
8903 aactactatttatactagaa 8922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 57 - 134
Target Start/End: Original strand, 683 - 760
Alignment:
57 tgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatact 134  Q
    ||||||||||||||||||||||||| ||||||  |||||||||||| ||||| ||||||| ||||| ||||| |||||    
683 tgcggatagtttgagtgtaagttttttgtatgactgaattgtgacctgttttccctatgaaaaactactatttatact 760  T

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Target: scaffold0001 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 5)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 25159 - 25225
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| |||||||||||||||||||||||| || ||||||||||| ||||    
25159 ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaacttctatttatac 25225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 28657 - 28723
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| |||||||||||||||||||||||| || ||||||||||| ||||    
28657 ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaacttctatttatac 28723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 115416 - 115482
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| |||||||||||||||||||||||| || ||||||||||| ||||    
115416 ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaacttctatttatac 115482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 122
Target Start/End: Complemental strand, 390143 - 390088
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaact 122  Q
    |||||||||||||||  ||||| |||||||||||||||||||||||| || |||||    
390143 ttgagtgtaagttttgagtatgattgaattgtgacccgtttttcctaagaaaaact 390088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 129968 - 130033
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| ||||||||||| | |||||||||| || ||||||||||| ||||    
129968 ttgagtgtaagtttttagtatgattgaattgtga-ctgtttttcctaagaaaaacttctatttatac 130033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 67 - 128
Target Start/End: Original strand, 18569 - 18630
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctatt 128  Q
    |||||||||||||||  ||||| |||||||||||||||||||||||| || |||||||||||    
18569 ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaacttctatt 18630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 67 - 128
Target Start/End: Original strand, 28100 - 28161
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctatt 128  Q
    |||||||||||||||  ||||| |||||||||||||||||||||||| || |||||||||||    
28100 ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaacttctatt 28161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 60 - 133
Target Start/End: Original strand, 33401 - 33474
Alignment:
60 ggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||| |||||||||  ||||| |||||||||||||||||||||||| || ||||| ||||| ||||    
33401 ggatagtttgagcgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac 33474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 29411 - 29477
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| |||||||||||||||||||||||| || ||||| ||||| ||||    
29411 ttgagtgtaagttttgagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac 29477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 39920 - 39854
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    ||||||||||||||| |||||| ||||||||||||| |||||||||| || ||||| ||||| ||||    
39920 ttgagtgtaagttttttgtatgattgaattgtgacctgtttttcctaagaaaaactactatttatac 39854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 31245 - 31359
Alignment:
19 attcatacattttgacttgtaactcgtttatatctaaatgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgaga 118  Q
    ||||||||||| ||| |||| || ||||| | | | |||| ||||||||||||||| ||||||||||||| ||||| | ||||  |||||||||| || |    
31245 attcatacattgtgatttgttacgcgtttctctttgaatgtggatagtttgagtgttagttttctgtatgattgaactctgacatgtttttcctaagaaa 31344  T
119 aacttctattaatac 133  Q
    |||| ||||| ||||    
31345 aactactatttatac 31359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 23088 - 23022
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| |||||||||||||||||||||||| || ||||| ||||| ||||    
23088 ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac 23022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 44264 - 44198
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| |||||||||||||||||||||||| || ||||| ||||| ||||    
44264 ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac 44198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 44331 - 44397
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    ||||||||||||||| |||||| ||||||||||||| |||||||||| || ||||| ||||| ||||    
44331 ttgagtgtaagttttttgtatgattgaattgtgacctgtttttcctaagaaaaactcctatttatac 44397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 32137 - 32071
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| |||||||||||||||||||||||| || ||||| ||||| ||||    
32137 ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac 32071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 30651 - 30585
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| |||||||||||||||||||||||| || ||||| ||||| ||||    
30651 ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac 30585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 118437 - 118503
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| |||||||||||||||||||||||| || ||||| ||||| ||||    
118437 ttgagtgtaagttttgcgtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac 118503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 142287 - 142353
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||   |||| |||||||||||||||||||||||| || ||||| ||||| ||||    
142287 ttgagtgtaagttttgaatatgattgaattgtgacccgtttttcctaagaaaaactactatttatac 142353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 5)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 62206 - 62140
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| |||||||||||||||||||||||| || ||||| ||||| ||||    
62206 ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac 62140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 71384 - 71318
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| |||||||||||||||||||||||| || ||||| ||||| ||||    
71384 ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac 71318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 6727 - 6793
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    ||||||||||||||| |||||| ||||||||||| || ||||||||| || ||||| ||||| ||||    
6727 ttgagtgtaagttttttgtatgattgaattgtgatccctttttcctaagaaaaactactatttatac 6793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 85067 - 85001
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    ||||||||||||| |  ||||| |||||||||||||||||||||||| || ||||| ||||| ||||    
85067 ttgagtgtaagttcttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac 85001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 128
Target Start/End: Complemental strand, 22680 - 22619
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctatt 128  Q
    |||||||||||||||  ||||| | ||||| |||||||||||||||| || ||||| |||||    
22680 ttgagtgtaagtttttagtatgatcgaattatgacccgtttttcctaagaaaaactactatt 22619  T

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Target: scaffold0063 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 133
Target Start/End: Complemental strand, 70711 - 70634
Alignment:
56 atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    ||||||||| ||||||||||||| || |||||| ||||||||||| ||||||| ||||||  ||||| ||||| ||||    
70711 atgcggataatttgagtgtaagtattttgtatgattgaattgtgatccgttttccctatggaaaactactatttatac 70634  T

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Target: scaffold0019 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 59 - 133
Target Start/End: Original strand, 151462 - 151537
Alignment:
59 cggatagt-ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||| |||||||||||||||  ||||| |||||||||||||| ||||||||| || ||||| ||||| ||||    
151462 cggatagtattgagtgtaagtttttagtatgattgaattgtgacccctttttcctaagaaaaactactatttatac 151537  T

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Target: scaffold0770 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0770
Description:

Target: scaffold0770; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 122
Target Start/End: Original strand, 3760 - 3825
Alignment:
56 atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaact 122  Q
    ||||||||| |||||||||||||||| |||||| |||||||||||||| |||| | || ||||||||    
3760 atgcggataatttgagtgtaagtttt-tgtatgattgaattgtgaccctttttacttaagagaaact 3825  T

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Target: scaffold0740 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 5693 - 5627
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| |||||||||||||| ||||||||| || ||||| ||||| ||||    
5693 ttgagtgtaagtttttagtatgattgaattgtgacccatttttcctaagaaaaactactatttatac 5627  T

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Target: scaffold0480 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 3805 - 3711
Alignment:
20 ttcatacattttgacttgtaactcgtttatatctaa-atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttccta 113  Q
    |||||||||||  |||||| |||||||| | |||   ||||||||| |||||||||||||||| |||||| | |||||||||||| |||| ||||    
3805 ttcatacatttcaacttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgatagaattgtgacccattttcccta 3711  T

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Target: scaffold0358 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 128
Target Start/End: Complemental strand, 15785 - 15715
Alignment:
59 cggatagt-ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctatt 128  Q
    |||||||| |||||||||||||||  ||||| |||| ||||||||||||||||||| || ||||| |||||    
15785 cggatagtattgagtgtaagttttgagtatgattgatttgtgacccgtttttcctaagaaaaactactatt 15715  T

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Target: scaffold0282 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 8829 - 8895
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| ||||||||||||| |||||||||| || ||||| ||||| ||||    
8829 ttgagtgtaagtttttagtatgattgaattgtgacctgtttttcctaagaaaaactactatttatac 8895  T

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Target: scaffold0270 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 8149 - 8215
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| |||||||||||||||||||| ||| || ||||| ||||| ||||    
8149 ttgagtgtaagtttttagtatgattgaattgtgacccgttttttctaagaaaaactactatttatac 8215  T

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Target: scaffold0270; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 15279 - 15345
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| |||||||||||||||||||| ||| || ||||| ||||| ||||    
15279 ttgagtgtaagtttttagtatgattgaattgtgacccgttttttctaagaaaaactactatttatac 15345  T

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Target: scaffold0241 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 25142 - 25076
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| |||||||||||||| ||||||||| || ||||| ||||| ||||    
25142 ttgagtgtaagtttttagtatgattgaattgtgacccatttttcctaagaaaaactactatttatac 25076  T

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Target: scaffold0193 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 26847 - 26893
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttccta 113  Q
    |||||||||||||||  ||||| ||||||||||||||||||||||||    
26847 ttgagtgtaagtttttagtatgattgaattgtgacccgtttttccta 26893  T

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Target: scaffold0101 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 46338 - 46404
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| |||||||||||||| ||||||||| || ||||| ||||| ||||    
46338 ttgagtgtaagtttttagtatgattgaattgtgacccatttttcctaagaaaaactactatttatac 46404  T

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Target: scaffold0101; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 50976 - 51042
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| |||||||||||||| ||||||||| || ||||| ||||| ||||    
50976 ttgagtgtaagtttttagtatgattgaattgtgacccatttttcctaagaaaaactactatttatac 51042  T

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Target: scaffold0080 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 2493 - 2427
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    ||||| |||||||||  ||||| ||||||||||||||||||||| || || ||||||||||| ||||    
2493 ttgagggtaagtttttggtatgattgaattgtgacccgtttttcttaagaaaaacttctatttatac 2427  T

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Target: scaffold0064 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 43189 - 43255
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||| ||  ||||| |||||||||||||||||||||||| || ||||| ||||| ||||    
43189 ttgagtgtaagtgtttagtatgattgaattgtgacccgtttttcctaagaaaaactactatttatac 43255  T

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Target: scaffold0029 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 122
Target Start/End: Original strand, 102064 - 102129
Alignment:
56 atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaact 122  Q
    ||||||||| |||||||||||||||| |||||| |||||||||||||| |||| | || ||||||||    
102064 atgcggataatttgagtgtaagtttt-tgtatgattgaattgtgaccctttttccttaagagaaact 102129  T

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Target: scaffold0022 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 58562 - 58496
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| ||||||||||||| |||||||||| || ||||| ||||| ||||    
58562 ttgagtgtaagtttttagtatgattgaattgtgacctgtttttcctaagaaaaactactatttatac 58496  T

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Target: scaffold0168 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 133
Target Start/End: Original strand, 1464 - 1541
Alignment:
56 atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    ||||||||| |||||||||||||||| |||||| |||| ||||||||| |||| | || || ||||| ||||| ||||    
1464 atgcggataatttgagtgtaagttttttgtatgattgacttgtgaccctttttccttaggaaaaactactatttatac 1541  T

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Target: scaffold0059 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 133
Target Start/End: Original strand, 68171 - 68244
Alignment:
60 ggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||| |||||||||  ||||| |||||||||||| | ||||||||| || ||||| ||||| ||||    
68171 ggatagtttgagcgtaagtttttagtatgattgaattgtgactcttttttcctaagaaaaactactatttatac 68244  T

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Target: scaffold0059; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 133
Target Start/End: Original strand, 76276 - 76349
Alignment:
60 ggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||| |||||||||  ||||| |||||||||||| | ||||||||| || ||||| ||||| ||||    
76276 ggatagtttgagcgtaagtttttagtatgattgaattgtgactcttttttcctaagaaaaactactatttatac 76349  T

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Target: scaffold0016 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 113
Target Start/End: Complemental strand, 200189 - 200137
Alignment:
60 ggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttccta 113  Q
    ||||| |||||||||||||||| |||||| |||||||||||||| |||||||||    
200189 ggataatttgagtgtaagtttt-tgtatgattgaattgtgacccttttttccta 200137  T

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Target: scaffold0013 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 133
Target Start/End: Complemental strand, 129230 - 129157
Alignment:
60 ggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||| |||| ||||  ||||| |||||||||||||| ||||||||| || ||||| ||||| ||||    
129230 ggatagtttgagcgtaaatttttagtatgattgaattgtgacccttttttcctaagaaaaactactatttatac 129157  T

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Target: scaffold0151 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 14204 - 14255
Alignment:
56 atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttt 108  Q
    ||||||||| |||||||||||||||| |||||| |||||||||||||| ||||    
14204 atgcggataatttgagtgtaagtttt-tgtatgattgaattgtgacccttttt 14255  T

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Target: scaffold0509 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 133
Target Start/End: Original strand, 1293 - 1356
Alignment:
70 agtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    ||||||||||||  ||||| ||||||||||||| |||||||||| || ||||| ||||| ||||    
1293 agtgtaagtttttagtatgattgaattgtgacctgtttttcctaagaaaaactactatttatac 1356  T

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Target: scaffold0509; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 133
Target Start/End: Original strand, 7721 - 7784
Alignment:
70 agtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    ||||||||||||  ||||| ||||||||||||| |||||||||| || ||||| ||||| ||||    
7721 agtgtaagtttttagtatgattgaattgtgacctgtttttcctaagaaaaactactatttatac 7784  T

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Target: scaffold0304 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0304
Description:

Target: scaffold0304; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 133
Target Start/End: Original strand, 5853 - 5916
Alignment:
70 agtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    ||||||||||||  ||||| |||||||||||||| ||||||||| || ||||| ||||| ||||    
5853 agtgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaactactatttatac 5916  T

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Target: scaffold0190 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 111
Target Start/End: Complemental strand, 7495 - 7440
Alignment:
56 atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcc 111  Q
    ||||||||| |||||||||| ||||| |||||| |||||||||||| | |||||||    
7495 atgcggataatttgagtgtatgttttttgtatgattgaattgtgactcttttttcc 7440  T

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Target: scaffold0216 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 20041 - 20107
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    ||||| |||||||||  ||||| |||||||||||||| ||||||||| || ||||| ||||| ||||    
20041 ttgagcgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaactactatttatac 20107  T

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Target: scaffold0077 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 102
Target Start/End: Complemental strand, 12397 - 12351
Alignment:
56 atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacc 102  Q
    ||||||||| |||||||||||||||| |||||| |||| ||||||||    
12397 atgcggataatttgagtgtaagttttttgtatgattgatttgtgacc 12351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 45304 - 45370
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    ||||| |||||||||  ||||| |||||||||||||| ||||||||| || ||||| ||||| ||||    
45304 ttgagcgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaactactatttatac 45370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 41396 - 41330
Alignment:
67 ttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    |||||||||||||||  ||||| || |||||||||| |||||||||| || ||||| ||||| ||||    
41396 ttgagtgtaagtttttagtatgattaaattgtgacctgtttttcctaagaaaaactactatttatac 41330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 63832 - 63774
Alignment:
70 agtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctatt 128  Q
    ||||||| ||||  ||||| |||||||||||||||||||||||| || ||||| |||||    
63832 agtgtaaatttttagtatgattgaattgtgacccgtttttcctaagaaaaactactatt 63774  T

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Target: scaffold0100 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 133
Target Start/End: Complemental strand, 9056 - 8980
Alignment:
56 atgcggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttcctatgagaaacttctattaatac 133  Q
    ||||||||| ||||| |||||||||| |||||| |||||||||||| | |||| | || |||||||| ||||| ||||    
9056 atgcggataatttgaatgtaagtttt-tgtatgattgaattgtgactctttttccttaagagaaactactatttatac 8980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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