View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1937_low_1 (Length: 586)

Name: NF1937_low_1
Description: NF1937
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1937_low_1
NF1937_low_1
[»] chr2 (27 HSPs)
chr2 (10-435)||(10460365-10460785)
chr2 (443-568)||(10459872-10460002)
chr2 (95-285)||(10470270-10470459)
chr2 (92-303)||(10515231-10515441)
chr2 (95-307)||(10486353-10486561)
chr2 (119-286)||(10542380-10542544)
chr2 (116-297)||(10504871-10505054)
chr2 (108-259)||(10490893-10491040)
chr2 (448-547)||(7463785-7463884)
chr2 (93-303)||(10858024-10858227)
chr2 (91-307)||(27965107-27965319)
chr2 (441-568)||(10503864-10503989)
chr2 (453-568)||(10514668-10514782)
chr2 (92-307)||(9077795-9078006)
chr2 (131-307)||(28106881-28107053)
chr2 (472-568)||(10485802-10485898)
chr2 (99-259)||(7483622-7483770)
chr2 (198-307)||(9083142-9083251)
chr2 (442-568)||(10541535-10541656)
chr2 (370-426)||(7463371-7463427)
chr2 (252-307)||(10504451-10504506)
chr2 (531-568)||(9083526-9083563)
chr2 (471-518)||(10469861-10469908)
chr2 (369-427)||(10504743-10504801)
chr2 (530-568)||(10541787-10541825)
chr2 (178-239)||(10846604-10846664)
chr2 (483-556)||(10893679-10893752)


Alignment Details
Target: chr2 (Bit Score: 334; Significance: 0; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 334; E-Value: 0
Query Start/End: Original strand, 10 - 435
Target Start/End: Complemental strand, 10460785 - 10460365
Alignment:
Q  10 ataatactattgtagattctgtaaattttgccagtagctctataaattagtcttgataaacaaatcccccaatctttgctattatgcaccacatgatagc 109  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  10460785 ataatactattgtagattctgtaaattctgccagtagctctataaattagtcttgataaacaaatcccccaatctttgctattatgcaccacataatagc 10460686  T
Q  110 aaagaccacactgttccaccaaatcttgataaacatggtgtttttgtgctattttttaacctactaataaagaatattatttggctatttttaacagcaa 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  10460685 aaagaccacactgttccaccaaatcttgataaacatggtgtttttgtgctattttttaacctactaataaaaaatattatttggctatttttaacagcaa 10460586  T
Q  210 acacttgtggcattggctttcacattgaagaggaagtatgacctaataacatatataaggtaccgtaacctttacatgttgttaaatcttatttcaaann 309  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     ||||||||||||||||||||||||      
T  10460585 acacttctggcattggctttcacattgaagaggaagtatgacctaataacatatataaggtaccgtaac-----catgttgttaaatcttatttcaaatt 10460491  T
Q  310 nnnnnngttttgtcttatacacactctacctctggtcattattataagcnnnnnnnntttgcttcaaatttgggtcaatattgtaagtaaaatttcacaa 409  Q
          |||||||||||||||||||||||||||||||||||| ||||||        |||||||||||||||||||||||||||||||||||||||||||    
T  10460490 ttttttgttttgtcttatacacactctacctctggtcattataataagcaaaaaaaatttgcttcaaatttgggtcaatattgtaagtaaaatttcacaa 10460391  T
Q  410 cttttacactatttaatgttgttatt 435  Q
    |||||||||||||||||| |||||||    
T  10460390 cttttacactatttaatgctgttatt 10460365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 443 - 568
Target Start/End: Complemental strand, 10460002 - 10459872
Alignment:
Q  443 aagaagatgtgatggaatgtcatatca-----gtttaaagatctttgaattttcataggtttgatctacttaacgagaattttcaatccaacagttggat 537  Q
    |||||||||||||||||||||||||||     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10460002 aagaagatgtgatggaatgtcatatcatatcagtttaaagatctttgaattttcataggtttgatctacttaacgagaattttcaatccaacagttggat 10459903  T
Q  538 tgatttaattcgccttctaccaagagatatt 568  Q
    |||||||||||||||||||||||||||||||    
T  10459902 tgatttaattcgccttctaccaagagatatt 10459872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 95 - 285
Target Start/End: Complemental strand, 10470459 - 10470270
Alignment:
Q  95 gcaccacatgatagcaaagaccacactgttccaccaaatcttgataaacatggtgtttttgtgctattttttaacctactaataaagaatattatttggc 194  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||| | |||| |||||||||||||||||    
T  10470459 gcaccacataatagcaaagaccacactgttccaacaaatcttgataaacatggtggtgttgtgctattttttaacatgctaaaaaagaatattatttggc 10470360  T
Q  195 tatttttaacagcaaacacttgtggcattggctttcacattgaagaggaagtatgacctaataacatatataaggtaccgtaacctttaca 285  Q
    || |||||||||   |||||||||||  |||||||||| || ||||| |||||||| ||| |||||||| |||||||||||||||||||||    
T  10470359 ta-ttttaacagggtacacttgtggcgctggctttcactttaaagagaaagtatgatctactaacatatctaaggtaccgtaacctttaca 10470270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 92 - 303
Target Start/End: Complemental strand, 10515441 - 10515231
Alignment:
Q  92 tatgcaccacatgatagcaaagaccacactgttccaccaaatcttgataaacatggtgtttttgtgctattttttaac-ctactaataaagaatattatt 190  Q
    |||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||| || || |||||||| |  || |||| |||||||||||||    
T  10515441 tatgcatcacataatagcaaagaccacactgttccaccaaaacttgataaacatggtgttgttatgttatttttttatactgctaaaaaagaatattatt 10515342  T
Q  191 tggctatttttaacagcaaacacttgtggcattggctttcacattgaagaggaagtatgacctaataacatatataaggtaccgtaacctttacatgttg 290  Q
     ||||||||| ||||| | |||||||||||||||||||||||||||||||||||||| ||   |||||||||| ||||||||||||||||||| |||| |    
T  10515341 -ggctatttt-aacaggatacacttgtggcattggctttcacattgaagaggaagtacgatgcaataacatatttaaggtaccgtaacctttatatgtgg 10515244  T
Q  291 ttaaatcttattt 303  Q
    ||||||| |||||    
T  10515243 ttaaatcctattt 10515231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 95 - 307
Target Start/End: Complemental strand, 10486561 - 10486353
Alignment:
Q  95 gcaccacatgatagcaaagaccacactgttccaccaaatcttgataaacatggtgtttttgtgctattttttaacctactaataaagaatattatttggc 194  Q
    ||||| ||| ||||||||||||||||||||| || || |||||||||||||||||||   ||||||||||||||| |||||| |||||||||||| ||||    
T  10486561 gcacctcataatagcaaagaccacactgttcaactaactcttgataaacatggtgtt---gtgctattttttaacatactaaaaaagaatattatctggc 10486465  T
Q  195 tatttttaacagcaaacacttgtggcattggctttcacattgaagaggaagtatgacctaataacatatataaggtaccgtaacctttacatgttgttaa 294  Q
    |||||| ||||| | |||||||||||||||||||||||| | | ||| ||||||||  ||||||| ||| |||||||| || |||||| |||||  ||||    
T  10486464 tatttt-aacaggatacacttgtggcattggctttcacactaaggagaaagtatgatgtaataacttatctaaggtacggtgacctttgcatgtgattaa 10486366  T
Q  295 atcttatttcaaa 307  Q
    ||| |||||||||    
T  10486365 atcctatttcaaa 10486353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 119 - 286
Target Start/End: Complemental strand, 10542544 - 10542380
Alignment:
Q  119 actgttccaccaaatcttgataaacatggtgtttttgtgctattttttaacctactaataaagaatattatttggctatttttaacagcaaacacttgtg 218  Q
    |||||||||| || ||||||||||||||||  | || ||||||||||||| ||||||| |||||| |||||||||||||||| ||||||| |||||||||    
T  10542544 actgttccacaaagtcttgataaacatggt--tattatgctattttttaatctactaaaaaagaacattatttggctatttt-aacagcatacacttgtg 10542448  T
Q  219 gcattggctttcacattgaagaggaagtatgacctaataacatatataaggtaccgtaacctttacat 286  Q
    | ||||||||| ||||||||||| |||||||  |||||||||||| |||||||| |||||||||||||    
T  10542447 gtattggcttttacattgaagagaaagtatggtctaataacatatctaaggtactgtaacctttacat 10542380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 116 - 297
Target Start/End: Complemental strand, 10505054 - 10504871
Alignment:
Q  116 cacactgttccaccaaatcttgataaacatggtgtttttgtgctattttttaacctactaataaagaata---ttatttggctatttttaacagcaaaca 212  Q
    ||||||||||||||||||||||||||||||| |||| | ||||||| || |||||||||  |||| | ||   ||||||||| ||||| ||||| | |||    
T  10505054 cacactgttccaccaaatcttgataaacatgatgttgtggtgctatattctaacctactggtaaaaactaatgttatttggcgatttt-aacaggataca 10504956  T
Q  213 cttgtggcattggctttcacattgaagaggaagtatgacctaataacatatataaggtaccgtaacctttacatgttgttaaatc 297  Q
    ||||||||||||||||||||||||||||| ||||||||  | ||||||||| |||||||| || |||||||||||| ||||||||    
T  10504955 cttgtggcattggctttcacattgaagagaaagtatgatgtcataacatatctaaggtacagtgacctttacatgtggttaaatc 10504871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 108 - 259
Target Start/End: Complemental strand, 10491040 - 10490893
Alignment:
Q  108 gcaaagaccacactgttccaccaaatcttgataaacatggtgtttttgtgctattttttaacctactaataaagaatattatttggctatttttaacagc 207  Q
    |||| ||| ||||||||||||||| |||||||||||||||||||   |||||||||||||| |||||   ||||||||||||||||||| |||||||||     
T  10491040 gcaaggactacactgttccaccaactcttgataaacatggtgtt---gtgctattttttaatctactgtaaaagaatattatttggcta-ttttaacagg 10490945  T
Q  208 aaacacttgtggcattggctttcacattgaagaggaagtatgacctaataac 259  Q
    | ||||||||||||||| |||||||| | | ||| ||||||||  |||||||    
T  10490944 atacacttgtggcattgactttcacactaaggagaaagtatgatgtaataac 10490893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 448 - 547
Target Start/End: Original strand, 7463785 - 7463884
Alignment:
Q  448 gatgtgatggaatgtcatatcagtttaaagatctttgaattttcataggtttgatctacttaacgagaattttcaatccaacagttggattgatttaatt 547  Q
    ||||||||||||| ||| ||||| |||||||||| |||| ||| ||||||||||||||||||||||||||||||||  |||||||||| |||||||||||    
T  7463785 gatgtgatggaatatcacatcagcttaaagatctatgaacttttataggtttgatctacttaacgagaattttcaactcaacagttgggttgatttaatt 7463884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 93 - 303
Target Start/End: Complemental strand, 10858227 - 10858024
Alignment:
Q  93 atgcaccacatgatagcaaagaccacactgttccaccaaatcttgataaacatggtgtttttgtgctattttttaacctactaataaagaatattatttg 192  Q
    ||||||||||  ||| ||||| || ||||||||||| |||||||||||||||||||  | || |||| | |||||| |||||||    |||||||||| |    
T  10858227 atgcaccacaacataacaaaggccgcactgttccacaaaatcttgataaacatggt--tgttatgctgtcttttaatctactaa----gaatattattgg 10858134  T
Q  193 gctatttttaacagcaaacacttgtggcattggctttcacattgaagaggaagtatgacctaataacatatataaggtaccgtaacctttacatgttgtt 292  Q
    |||||||| ||||| | | ||||||||||||||||||||||||||||  || |  ||  | |||||||||| ||||||||| ||||||||| |||| |||    
T  10858133 gctatttt-aacaggatatacttgtggcattggctttcacattgaaggagagggttggtcaaataacatatctaaggtaccttaacctttaaatgtggtt 10858035  T
Q  293 aaatcttattt 303  Q
    ||||| |||||    
T  10858034 aaatcctattt 10858024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 91 - 307
Target Start/End: Complemental strand, 27965319 - 27965107
Alignment:
Q  91 ttatgcaccacatgatagcaaagaccacactgttccaccaaatcttgataaacatggtgtttttgtgctattttttaacctactaataaagaatattatt 190  Q
    ||||||||||||  |||||||| ||  || |||||| |  ||||||||||||||||||  | || |||||| |||||| ||||||| |||||||||||||    
T  27965319 ttatgcaccacaatatagcaaatactgcagtgttccgcataatcttgataaacatggt--tgttatgctatcttttaatctactaa-aaagaatattatt 27965223  T
Q  191 tggctatttttaacagcaaacacttgtggcattggctttcacattgaagaggaagtatgacctaataacatatataaggtaccgtaacctttacatgttg 290  Q
     ||||||||| ||||||| || |||||||||||| || ||||| |||||||| ||||||  | | |||||||| ||||||||| |  |||||| || | |    
T  27965222 gggctatttt-aacagcatacccttgtggcattgtctatcacaatgaagagggagtatggtcaagtaacatatctaaggtaccctggcctttaaatatgg 27965124  T
Q  291 ttaaatcttatttcaaa 307  Q
    |||||||||| ||||||    
T  27965123 ttaaatcttacttcaaa 27965107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 441 - 568
Target Start/End: Complemental strand, 10503989 - 10503864
Alignment:
Q  441 gtaagaagatgtgatggaatgtcatatcagtttaaagatctttgaattttcataggtttgatctacttaacgagaattttcaatccaacagttggattga 540  Q
    |||||| ||||||||||||| ||||||||| |||||||||| |||| ||| ||||||||||||||||||| ||||||||||||  | || |  || ||||    
T  10503989 gtaagatgatgtgatggaatatcatatcagcttaaagatctatgaacttttataggtttgatctacttaatgagaattttcaa--ctacgggagggttga 10503892  T
Q  541 tttaattcgccttctaccaagagatatt 568  Q
    ||||||||||||||||| || |||||||    
T  10503891 tttaattcgccttctacaaaaagatatt 10503864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 453 - 568
Target Start/End: Complemental strand, 10514782 - 10514668
Alignment:
Q  453 gatggaatgtcatatcagtttaaagatctttgaattttcataggtttgatctacttaacgagaattttcaatccaacagttggattgatttaattcgcct 552  Q
    |||||||| ||||||| |||||||||| | |||||||| ||| |||||||||||| ||| | || ||||||| |||  |||||||||||||||||| |||    
T  10514782 gatggaatatcatatcggtttaaagatatatgaatttt-atatgtttgatctactgaacaaaaaatttcaattcaaaggttggattgatttaattcacct 10514684  T
Q  553 tctaccaagagatatt 568  Q
     |||| ||||||||||    
T  10514683 cctacaaagagatatt 10514668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 92 - 307
Target Start/End: Original strand, 9077795 - 9078006
Alignment:
Q  92 tatgcaccacatgatagcaaagaccacactgttccaccaaatcttgataaacatggtgtttttgtgctattttttaacctactaataaagaatattattt 191  Q
    |||||||| ||  |||||||||||  ||||||||||   |||||||||||| |||||  || ||   |||||||||| ||||||| |||||||| | ||     
T  9077795 tatgcacctcagaatagcaaagactgcactgttccatagaatcttgataaatatggttgttatgctatattttttaatctactaacaaagaatactgttg 9077894  T
Q  192 ggctatttttaacagcaaacacttgtggcattggctttcacattgaagaggaagtatgacctaataacatatataaggtaccgtaacctttacatgttgt 291  Q
    ||||||||| |||||||    ||||||||||||||||||| ||||||   ||||  ||  |  | ||||||| |||||||||  ||||||||||||| ||    
T  9077895 ggctatttt-aacagcatcaccttgtggcattggctttcaaattgaa---gaagcgtggtcgtaaaacatatctaaggtaccacaacctttacatgtggt 9077990  T
Q  292 taaatcttatttcaaa 307  Q
    |||||| |||||||||    
T  9077991 taaatcctatttcaaa 9078006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 131 - 307
Target Start/End: Original strand, 28106881 - 28107053
Alignment:
Q  131 aatcttgataaacatggtgtttttgtgctattttttaacctactaataaagaatattatttggctatttttaacagcaaacacttgtggcattggctttc 230  Q
    ||||||||||||||||||  | || |||||| |||| | ||||||| ||||||||||||| ||||||||| ||||| | || |||||||||||| || ||    
T  28106881 aatcttgataaacatggt--tcttatgctatcttttgatctactaa-aaagaatattattgggctatttt-aacagtatacccttgtggcattgtctatc 28106976  T
Q  231 acattgaagaggaagtatgacctaataacatatataaggtaccgtaacctttacatgttgttaaatcttatttcaaa 307  Q
    ||| |||||||| ||||||  | | |||||||| ||||||||| |  |||| | || | ||||||||||| ||||||    
T  28106977 acaatgaagagggagtatggtcaagtaacatatctaaggtaccctggccttcaaatatggttaaatcttacttcaaa 28107053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 472 - 568
Target Start/End: Complemental strand, 10485898 - 10485802
Alignment:
Q  472 ttaaagatctttgaattttcataggtttgatctacttaacgagaattttcaatccaacagttggattgatttaattcgccttctaccaagagatatt 568  Q
    |||||||||| |||||||| |||||||| || ||||| | ||||||||||||| | || |||  |||||||||||| ||||||||| ||||||||||    
T  10485898 ttaaagatctatgaatttttataggtttaatgtacttcatgagaattttcaattccacggttttattgatttaattagccttctacaaagagatatt 10485802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 99 - 259
Target Start/End: Original strand, 7483622 - 7483770
Alignment:
Q  99 cacatgatagcaaagaccacactgttccaccaaatcttgataaacatggtgtttttgtgctattttttaacctactaataaagaatattatttggctatt 198  Q
    ||||| ||||||||||||||||| ||||||||| |||||||| |||||      |||||||||| |||||||     | ||| |||||||||| |||| |    
T  7483622 cacataatagcaaagaccacactattccaccaactcttgatagacatg------ttgtgctattctttaacc-----aaaaacaatattattttgcta-t 7483709  T
Q  199 tttaacagcaaacacttgtggcattggctttcacattgaagaggaagtatgacctaataac 259  Q
    |||||||| | ||||||||||||||| |||||||| | | ||| ||||||||  |||||||    
T  7483710 tttaacaggatacacttgtggcattgactttcacactaaggagaaagtatgatgtaataac 7483770  T

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Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 198 - 307
Target Start/End: Original strand, 9083142 - 9083251
Alignment:
Q  198 ttttaacagcaaacacttgtggcattggctttcacattgaagaggaagtatgacctaataacatatataaggtaccgtaacctttacatgttgttaaatc 297  Q
    ||||| ||||| ||||||||||||| ||||||||||||||||| | |   ||  |  || |||||| |||||||||| ||||||||||||  ||||||||    
T  9083142 ttttaccagcacacacttgtggcatcggctttcacattgaagaagtatagtggtcatatgacatatctaaggtaccgcaacctttacatgcggttaaatc 9083241  T
Q  298 ttatttcaaa 307  Q
     |||||||||    
T  9083242 ctatttcaaa 9083251  T

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Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 442 - 568
Target Start/End: Complemental strand, 10541656 - 10541535
Alignment:
Q  442 taagaagatgtgatggaatgtcatatcagtttaaagatctttgaattttcataggtttgatctacttaacgagaattttcaatccaacagttggattgat 541  Q
    ||||| || |||||||||| | |||||| |||||||||||  || |||| ||||||||||| |||||||| |||| |||||||    | ||||||||| |    
T  10541656 taagatgacgtgatggaatattatatcattttaaagatct--gagtttttataggtttgatatacttaacaagaactttcaat---tcggttggattggt 10541562  T
Q  542 ttaattcgccttctaccaagagatatt 568  Q
    |||||||||||| ||| ||| ||||||    
T  10541561 ttaattcgccttttacaaagtgatatt 10541535  T

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Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 426
Target Start/End: Original strand, 7463371 - 7463427
Alignment:
Q  370 gcttcaaatttgggtcaatattgtaagtaaaatttcacaacttttacactatttaat 426  Q
    ||||||||||| ||||||| || |||||||||||| || ||||||||||||||||||    
T  7463371 gcttcaaattttggtcaatgttataagtaaaatttaactacttttacactatttaat 7463427  T

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Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 252 - 307
Target Start/End: Complemental strand, 10504506 - 10504451
Alignment:
Q  252 ctaataacatatataaggtaccgtaacctttacatgttgttaaatcttatttcaaa 307  Q
    |||||||||||| ||||||||| | |||||||||||| |||||||| |||||||||    
T  10504506 ctaataacatatctaaggtaccatgacctttacatgtggttaaatcctatttcaaa 10504451  T

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Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 531 - 568
Target Start/End: Original strand, 9083526 - 9083563
Alignment:
Q  531 gttggattgatttaattcgccttctaccaagagatatt 568  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  9083526 gttggattgatttaattcgccttctacaaagagatatt 9083563  T

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Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 471 - 518
Target Start/End: Complemental strand, 10469908 - 10469861
Alignment:
Q  471 tttaaagatctttgaattttcataggtttgatctacttaacgagaatt 518  Q
    ||||||||||| |||||||| |||||||  ||||||||||||||||||    
T  10469908 tttaaagatctatgaatttttataggttatatctacttaacgagaatt 10469861  T

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Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 369 - 427
Target Start/End: Complemental strand, 10504801 - 10504743
Alignment:
Q  369 tgcttcaaatttgggtcaatattgtaagtaaaatttcacaacttttacactatttaatg 427  Q
    ||||| |||||  ||||| | |||||||||||||||||| ||| |||||||||||||||    
T  10504801 tgcttgaaattgtggtcattgttgtaagtaaaatttcactactgttacactatttaatg 10504743  T

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Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 530 - 568
Target Start/End: Original strand, 10541787 - 10541825
Alignment:
Q  530 agttggattgatttaattcgccttctaccaagagatatt 568  Q
    |||||||||||||||||||||||||||| ||||| ||||    
T  10541787 agttggattgatttaattcgccttctacaaagagttatt 10541825  T

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Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 239
Target Start/End: Complemental strand, 10846664 - 10846604
Alignment:
Q  178 aaagaatattatttggctatttttaacagcaaacacttgtggcattggctttcacattgaag 239  Q
    ||||| ||||||| ||||||||| ||||||  || |||||||||| ||||||||||||||||    
T  10846664 aaagagtattattgggctatttt-aacagcgtacgcttgtggcatcggctttcacattgaag 10846604  T

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Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 483 - 556
Target Start/End: Original strand, 10893679 - 10893752
Alignment:
Q  483 tgaattttcataggtttgatctacttaacgagaattttcaatccaacagttggattgatttaattcgccttcta 556  Q
    |||||||| |||||||  ||| |||||| | |||||||||||||| | |||||||| ||||| || ||||||||    
T  10893679 tgaatttttataggttcaatccacttaatgtgaattttcaatccagcggttggattaatttagtttgccttcta 10893752  T

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