View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19380_high_2 (Length: 748)

Name: NF19380_high_2
Description: NF19380
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19380_high_2
NF19380_high_2
[»] chr7 (20 HSPs)
chr7 (75-435)||(21612670-21613036)
chr7 (481-735)||(21613032-21613283)
chr7 (569-732)||(48219530-48219693)
chr7 (631-735)||(20377810-20377914)
chr7 (569-735)||(26500968-26501133)
chr7 (569-735)||(26591580-26591745)
chr7 (428-563)||(39476482-39476618)
chr7 (442-563)||(41219372-41219493)
chr7 (450-548)||(37524169-37524267)
chr7 (442-562)||(8260848-8260969)
chr7 (442-566)||(18239401-18239525)
chr7 (473-563)||(21153754-21153844)
chr7 (442-547)||(27874038-27874143)
chr7 (622-718)||(2913148-2913244)
chr7 (622-729)||(8725791-8725898)
chr7 (459-520)||(34354429-34354490)
chr7 (667-718)||(18239269-18239320)
chr7 (473-524)||(29714298-29714349)
chr7 (459-548)||(37449988-37450078)
chr7 (436-489)||(3742437-3742490)
[»] chr4 (31 HSPs)
chr4 (362-729)||(24607985-24608354)
chr4 (473-713)||(40962538-40962781)
chr4 (569-735)||(46815193-46815360)
chr4 (569-735)||(33163083-33163249)
chr4 (442-562)||(49065549-49065669)
chr4 (631-735)||(53267272-53267376)
chr4 (415-563)||(21713162-21713311)
chr4 (616-718)||(13867647-13867749)
chr4 (569-701)||(28797930-28798063)
chr4 (419-574)||(42038959-42039115)
chr4 (670-735)||(36173110-36173175)
chr4 (443-562)||(9242917-9243036)
chr4 (442-564)||(27761126-27761248)
chr4 (622-735)||(49261607-49261720)
chr4 (622-718)||(40221095-40221191)
chr4 (616-718)||(13855925-13856027)
chr4 (622-735)||(372822-372935)
chr4 (470-566)||(31936317-31936413)
chr4 (481-563)||(372703-372785)
chr4 (445-563)||(38131410-38131528)
chr4 (439-523)||(2777940-2778024)
chr4 (622-716)||(18414019-18414113)
chr4 (481-563)||(32935692-32935774)
chr4 (444-519)||(14289680-14289755)
chr4 (481-563)||(16525077-16525160)
chr4 (474-524)||(49261821-49261871)
chr4 (504-563)||(31823039-31823098)
chr4 (632-718)||(31936165-31936251)
chr4 (474-563)||(13856059-13856148)
chr4 (669-714)||(14990155-14990200)
chr4 (444-493)||(31823010-31823059)
[»] chr3 (22 HSPs)
chr3 (358-716)||(14995068-14995430)
chr3 (442-735)||(6755540-6755833)
chr3 (442-734)||(6462964-6463257)
chr3 (419-656)||(7956166-7956403)
chr3 (631-735)||(53825747-53825851)
chr3 (631-735)||(42948915-42949019)
chr3 (631-711)||(2324057-2324137)
chr3 (546-703)||(42384420-42384576)
chr3 (648-718)||(7955515-7955585)
chr3 (442-563)||(39415314-39415435)
chr3 (415-563)||(25574767-25574916)
chr3 (442-563)||(48086811-48086932)
chr3 (622-732)||(25886181-25886291)
chr3 (613-717)||(25744971-25745076)
chr3 (632-718)||(48087001-48087087)
chr3 (453-498)||(37282182-37282227)
chr3 (415-498)||(23029588-23029672)
chr3 (630-718)||(39415502-39415590)
chr3 (667-718)||(25575020-25575071)
chr3 (439-603)||(25745095-25745259)
chr3 (426-498)||(49742161-49742234)
chr3 (481-522)||(50561451-50561492)
[»] chr1 (28 HSPs)
chr1 (363-716)||(47983569-47983915)
chr1 (445-714)||(18843823-18844093)
chr1 (448-735)||(5766647-5766935)
chr1 (569-735)||(45690432-45690599)
chr1 (616-735)||(27034189-27034308)
chr1 (631-735)||(50066978-50067081)
chr1 (622-735)||(5767428-5767540)
chr1 (440-562)||(3660175-3660297)
chr1 (442-563)||(48566726-48566847)
chr1 (640-735)||(47486783-47486878)
chr1 (426-563)||(39222654-39222792)
chr1 (415-551)||(46923718-46923855)
chr1 (622-734)||(23602780-23602892)
chr1 (439-551)||(21482871-21482983)
chr1 (445-563)||(41871704-41871822)
chr1 (442-523)||(5770599-5770680)
chr1 (664-725)||(6086477-6086538)
chr1 (474-551)||(49597193-49597270)
chr1 (504-563)||(46178671-46178730)
chr1 (439-517)||(10308439-10308517)
chr1 (667-717)||(3782094-3782144)
chr1 (476-563)||(9343499-9343586)
chr1 (439-517)||(33686586-33686665)
chr1 (667-718)||(49597385-49597436)
chr1 (442-551)||(20447135-20447244)
chr1 (442-551)||(20532898-20533007)
chr1 (474-524)||(23602993-23603043)
chr1 (667-713)||(41871926-41871972)
[»] chr2 (12 HSPs)
chr2 (569-718)||(16710088-16710236)
chr2 (569-735)||(22494642-22494808)
chr2 (442-563)||(29908471-29908592)
chr2 (428-551)||(12874196-12874320)
chr2 (416-563)||(29132632-29132780)
chr2 (384-520)||(16710243-16710381)
chr2 (442-551)||(6903725-6903833)
chr2 (472-541)||(28266005-28266074)
chr2 (426-551)||(8556189-8556315)
chr2 (667-713)||(20149444-20149490)
chr2 (504-586)||(20149569-20149651)
chr2 (667-718)||(25685895-25685946)
[»] chr8 (9 HSPs)
chr8 (598-735)||(43636462-43636599)
chr8 (622-734)||(1931498-1931610)
chr8 (653-730)||(33775408-33775485)
chr8 (439-563)||(43693562-43693686)
chr8 (442-563)||(34471590-34471710)
chr8 (442-551)||(23542752-23542861)
chr8 (667-718)||(3964187-3964238)
chr8 (622-735)||(43835149-43835262)
chr8 (473-563)||(3964009-3964098)
[»] scaffold1700 (1 HSPs)
scaffold1700 (616-735)||(952-1071)
[»] chr6 (8 HSPs)
chr6 (569-725)||(35054679-35054835)
chr6 (616-691)||(9400164-9400239)
chr6 (444-585)||(23912225-23912366)
chr6 (449-563)||(319200-319314)
chr6 (442-551)||(13312555-13312664)
chr6 (481-523)||(17399041-17399083)
chr6 (463-524)||(9521402-9521463)
chr6 (667-718)||(23912082-23912133)
[»] chr5 (19 HSPs)
chr5 (546-735)||(3460115-3460304)
chr5 (633-735)||(4845485-4845587)
chr5 (631-735)||(40014167-40014270)
chr5 (426-563)||(6427235-6427373)
chr5 (475-702)||(2599801-2600028)
chr5 (427-548)||(7083984-7084106)
chr5 (616-734)||(9883733-9883851)
chr5 (442-563)||(28784767-28784888)
chr5 (439-563)||(1172933-1173057)
chr5 (470-563)||(10532789-10532882)
chr5 (671-735)||(19401724-19401788)
chr5 (443-563)||(41758709-41758829)
chr5 (667-725)||(10399112-10399170)
chr5 (622-718)||(19044036-19044132)
chr5 (443-522)||(11125823-11125901)
chr5 (473-523)||(16100880-16100930)
chr5 (667-718)||(41758554-41758605)
chr5 (439-548)||(1081899-1082009)
chr5 (473-563)||(20202606-20202696)
[»] scaffold0861 (1 HSPs)
scaffold0861 (428-563)||(3722-3858)
[»] scaffold0753 (1 HSPs)
scaffold0753 (457-562)||(3982-4088)
[»] scaffold0217 (1 HSPs)
scaffold0217 (457-562)||(25582-25688)
[»] scaffold0223 (2 HSPs)
scaffold0223 (634-718)||(15922-16006)
scaffold0223 (475-563)||(16079-16168)


Alignment Details
Target: chr7 (Bit Score: 258; Significance: 1e-143; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 75 - 435
Target Start/End: Original strand, 21612670 - 21613036
Alignment:
Q  75 acccaagagaatatcaaaaatcatttcgaaattgatatatttatcatttctcattttcactcgataatttcttttaacaagcaaaatgatttattgaaat 174  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  21612670 acccaagagaatatcaaaaatcatttcgaaattgatatatttatcatttctcattttcactcgataatttcttttaacaagcaaaatgaattattgaaat 21612769  T
Q  175 agaaggagtactctaacccatatataacaagaagagtacacatgaagtgaaaggcaaacaacatattacaatttaaaccgaaaaaacagtagcctacttc 274  Q
    | | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  21612770 acatggattactctaacccatatataacaagaagagtacacatgaagtgaaaggcaaacaacatattacaattcaaatcgaaaaaacagtagcctacttc 21612869  T
Q  275 tatccctccctcaatacaaactgaaccctcttttcctgnnnnnnntgcatcacgcagcacga-----acgcataaagatcatatgagattttagatttct 369  Q
    |||||||||||||||||||||||||||||||||||||        |||||||||||||||||     || ||||||| ||||||||||||||||||||||    
T  21612870 tatccctccctcaatacaaactgaaccctcttttccttaaaaaaatgcatcacgcagcacgaatgttacacataaagctcatatgagattttagatttct 21612969  T
Q  370 tctcttctccctatacttttctctcgcacccagctgaaaa-acattaatgcccctgtgctagttaag 435  Q
     |||||| |||| ||||||||||||||| |||| |||||| |||||||||||| |||||||||||||    
T  21612970 gctcttcgccctgtacttttctctcgcatccagttgaaaagacattaatgcccttgtgctagttaag 21613036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 481 - 735
Target Start/End: Original strand, 21613032 - 21613283
Alignment:
Q  481 ttaagtcacgcaccactggcatgtgcgcgagttaactcacgcagcttgactggtggtcagaactgaagaactcacgttttttgaaccgtgttcaaagcat 580  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||    
T  21613032 ttaagtcacgcaccattggcatgtgcgcgagttaactcacgcagcttgaccggtggtcagaactgaagaactcacgtttttgga-ccgtgttcaaagcat 21613130  T
Q  581 tttaattggttttgtatgtttttgttaaaaaatttcacgtgtttttactatatttatggtagatataacctatgttacaatctccccctataaatacacc 680  Q
    |||||||||||||| | |||||||||||   ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21613131 tttaattggttttgcacgtttttgttaagttatttcacgtttttttactatatttatggtagatataacctatgttacaatctccccctataaatacacc 21613230  T
Q  681 tctaaacttccccatttcctcacaccatctcacattctaactctcttcctcactc 735  Q
    ||||||||||||| ||||  |||||||||||||||||| ||||||||||||||||    
T  21613231 tctaaacttccccttttc--cacaccatctcacattctcactctcttcctcactc 21613283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 569 - 732
Target Start/End: Original strand, 48219530 - 48219693
Alignment:
Q  569 tgttcaaagcattttaattggttttgtatgtttttgttaaaaaatttcacgtgtttttactatatttatggtagatataacctatgttacaatctccccc 668  Q
    ||||||| |||||||||||| ||||  | |||||||||||    || ||||| |||| ||  |||||||||||||||||||||||||||||||||||| |    
T  48219530 tgttcaatgcattttaattgtttttacacgtttttgttaagtttttacacgttttttgaccctatttatggtagatataacctatgttacaatctcccac 48219629  T
Q  669 tataaatacacctctaaacttccccatttcctcacaccatctcacattctaactctcttcctca 732  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||    
T  48219630 tataaatacacctctaaacttccccatttcctcacaccatctcgcattctcactctcctcctca 48219693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 631 - 735
Target Start/End: Original strand, 20377810 - 20377914
Alignment:
Q  631 tatttatggtagatataacctatgttacaatctccccctataaatacacctctaaacttccccatttcctcacaccatctcacattctaactctcttcct 730  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||| ||||    
T  20377810 tatttatggtagatataacctatgttacaatctccccctataaatacacctctaaactttcccatttcttcacaccatctcacattctcactctcctcct 20377909  T
Q  731 cactc 735  Q
    |||||    
T  20377910 cactc 20377914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 569 - 735
Target Start/End: Complemental strand, 26501133 - 26500968
Alignment:
Q  569 tgttcaaagcattttaattggttttgtatgtttttgttaaaaaatttcacgtgtttttactatatttatggtagatataacctatgttacaatctccccc 668  Q
    ||||||| |||||||||||| |||   | |||||||||||    || ||||| |||| ||  ||||||||||||||||||||||||||||||||||||||    
T  26501133 tgttcaatgcattttaattgttttaacacgtttttgttaactttttacacgttttttgaccctatttatggtagatataacctatgttacaatctccccc 26501034  T
Q  669 tataaatacacctctaaacttccccatttcctcacaccatctcacattctaactctcttcctcactc 735  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||| |||||||||    
T  26501033 tataaatacacctctaaacttcccaatttcctcaca-catctcacattctcactctcctcctcactc 26500968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 569 - 735
Target Start/End: Original strand, 26591580 - 26591745
Alignment:
Q  569 tgttcaaagcattttaattggttttgtatgtttttgttaaaaaatttcacgtgtttttactatatttatggtagatataacctatgttacaatctccccc 668  Q
    ||||||| |||||||||||| |||   | |||||||||||    || ||||| |||| ||  ||||||||||||||||||||||||||||||||||||||    
T  26591580 tgttcaatgcattttaattgttttaacacgtttttgttaactttttacacgttttttgaccctatttatggtagatataacctatgttacaatctccccc 26591679  T
Q  669 tataaatacacctctaaacttccccatttcctcacaccatctcacattctaactctcttcctcactc 735  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||| |||||||||    
T  26591680 tataaatacacctctaaacttcccaatttcctcaca-catctcacattctcactctcctcctcactc 26591745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 428 - 563
Target Start/End: Original strand, 39476482 - 39476618
Alignment:
Q  428 tagttaag-catgcagcgtgacttaactagcacaccttataatctttgcgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgcagct 526  Q
    |||||||| |||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||| | || | |||||||||||||||||||| |     
T  39476482 tagttaagtcatgcagcgtgacttaactagcgcaccttataatctatgcgtgacttaagtcacgcaccattagcctatgcgcgagttaactcacgcacca 39476581  T
Q  527 tgactggtggtcagaactgaagaactcacgttttttg 563  Q
    || | |||||||||| |||||||||  ||||||||||    
T  39476582 tggccggtggtcagagctgaagaacaaacgttttttg 39476618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 442 - 563
Target Start/End: Complemental strand, 41219493 - 41219372
Alignment:
Q  442 gcgtgacttaactagcacaccttataatctttgcgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgcagcttgactggtggtcaga 541  Q
    |||||| |||||| || || ||||||| || ||||||| |||||||||||| ||||||| | ||||||||||||||||||||  ||| ||||||||||||    
T  41219493 gcgtgatttaacttgcgcatcttataacctctgcgtgacttaagtcacgcatcactggcctatgcgcgagttaactcacgcacgttggctggtggtcaga 41219394  T
Q  542 actgaagaactcacgttttttg 563  Q
    ||||||||||  ||||||||||    
T  41219393 actgaagaacaaacgttttttg 41219372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 450 - 548
Target Start/End: Complemental strand, 37524267 - 37524169
Alignment:
Q  450 taactagcacaccttataatctttgcgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgcagcttgactggtggtcagaactgaag 548  Q
    |||||| | |||||||||| || ||||||| |||||||||||||||||||| ||||||||||||| ||||||||  ||| |||||||||||||||||||    
T  37524267 taactaacgcaccttataagctctgcgtgacttaagtcacgcaccactggcctgtgcgcgagttacctcacgcacgttggctggtggtcagaactgaag 37524169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 442 - 562
Target Start/End: Original strand, 8260848 - 8260969
Alignment:
Q  442 gcgtgacttaactagcacaccttataatctttgcgtgaattaagtcacgcaccactg-gcatgtgcgcgagttaactcacgcagcttgactggtggtcag 540  Q
    |||||||||||||    ||||||||||||| ||||||| |||||||||||||||||| || | ||||||||||||||||||||  ||| | |||||||||    
T  8260848 gcgtgacttaactcatgcaccttataatctctgcgtgacttaagtcacgcaccactgagcctttgcgcgagttaactcacgcaagttggccggtggtcag 8260947  T
Q  541 aactgaagaactcacgtttttt 562  Q
    |||||| ||||  |||||||||    
T  8260948 aactgatgaacaaacgtttttt 8260969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 442 - 566
Target Start/End: Complemental strand, 18239525 - 18239401
Alignment:
Q  442 gcgtgacttaactagcacaccttataatctttgcgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgcagcttgactggtggtcaga 541  Q
    ||||||||||||| | |||||||||||  | || |||| |||||||||||| || |||| | |||||||||||||| |||||  |||   ||||||||||    
T  18239525 gcgtgacttaacttgtacaccttataacatctgtgtgacttaagtcacgcatcaatggcctatgcgcgagttaactaacgcacgttggtcggtggtcaga 18239426  T
Q  542 actgaagaactcacgttttttgaac 566  Q
    ||||||||||  |||||||||||||    
T  18239425 actgaagaacaaacgttttttgaac 18239401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 473 - 563
Target Start/End: Original strand, 21153754 - 21153844
Alignment:
Q  473 tgcgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgcagcttgactggtggtcagaactgaagaactcacgttttttg 563  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||||||  | | | ||||||| || |||||||||  ||||||||||    
T  21153754 tgcgtgagttaagtcacgcaccactggcatgtgcgtgagttaactcacgcacgtcggccggtggtcggagctgaagaacagacgttttttg 21153844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 442 - 547
Target Start/End: Complemental strand, 27874143 - 27874038
Alignment:
Q  442 gcgtgacttaactagcacaccttataatctttgcgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgcagcttgactggtggtcaga 541  Q
    ||||| ||||||| || |||| ||||| || ||||||| ||||| |||||||||||| | | ||||||||||||||||||||  ||| | ||||||||||    
T  27874143 gcgtggcttaacttgcgcaccatataacctctgcgtgacttaagccacgcaccactgacctatgcgcgagttaactcacgcacgttggccggtggtcaga 27874044  T
Q  542 actgaa 547  Q
    ||||||    
T  27874043 actgaa 27874038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 622 - 718
Target Start/End: Complemental strand, 2913244 - 2913148
Alignment:
Q  622 tttttactatatttatggtagatataacctatgttacaatctccccctataaatacacctctaaacttccccatttcctcacaccatctcacattct 718  Q
    ||||||||| ||||||||||| |||||||||| |||| ||   | ||||||||||  |||| |||||||| ||||| ||||||||||||||||||||    
T  2913244 tttttactacatttatggtagttataacctatattaccattctcacctataaatatccctccaaacttccacattttctcacaccatctcacattct 2913148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 622 - 729
Target Start/End: Original strand, 8725791 - 8725898
Alignment:
Q  622 tttttactatatttatggtagatataacctatgttacaatctccccctataaatacacctctaaacttccccatttcctcacaccatctcacattctaac 721  Q
    |||| |||| |||||| |||| ||||||||||||||  ||  |  ||||||||||| |||| |||||| | ||||||||||||||||||| |||||| ||    
T  8725791 ttttgactacatttattgtagttataacctatgttatcattccaacctataaatacccctccaaactttctcatttcctcacaccatctctcattctcac 8725890  T
Q  722 tctcttcc 729  Q
    ||||||||    
T  8725891 tctcttcc 8725898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 459 - 520
Target Start/End: Complemental strand, 34354490 - 34354429
Alignment:
Q  459 caccttataatctttgcgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcac 520  Q
    |||||||||  || ||||||| |||||||||| ||||||||| | |||||||||||||||||    
T  34354490 caccttatatgctctgcgtgacttaagtcacgtaccactggcctatgcgcgagttaactcac 34354429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 667 - 718
Target Start/End: Complemental strand, 18239320 - 18239269
Alignment:
Q  667 cctataaatacacctctaaacttccccatttcctcacaccatctcacattct 718  Q
    ||||||||||| |||| | ||||||| |||||||||||||||||||| ||||    
T  18239320 cctataaatacccctccatacttccctatttcctcacaccatctcactttct 18239269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 473 - 524
Target Start/End: Original strand, 29714298 - 29714349
Alignment:
Q  473 tgcgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgcag 524  Q
    ||||||| |||||||| ||||||||| | || ||||||||||||||||||||    
T  29714298 tgcgtgacttaagtcatgcaccactgacttgggcgcgagttaactcacgcag 29714349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 459 - 548
Target Start/End: Original strand, 37449988 - 37450078
Alignment:
Q  459 caccttataatctttgcgtgaattaagtcacgcaccactg-gcatgtgcgcgagttaactcacgcagcttgactggtggtcagaactgaag 548  Q
    ||||||||||||||||||||| ||||||| |||| ||||| || | ||| ||||||||||  ||||  ||||| |||||| | ||||||||    
T  37449988 caccttataatctttgcgtgacttaagtcgcgcatcactgagcctatgcacgagttaacttgcgcaagttgaccggtggtaaaaactgaag 37450078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 436 - 489
Target Start/End: Complemental strand, 3742490 - 3742437
Alignment:
Q  436 catgcagcgtgacttaactagcacaccttataatctttgcgtgaattaagtcac 489  Q
    |||||||||||| ||||||||| ||| ||||||||| || |||| |||||||||    
T  3742490 catgcagcgtgatttaactagcgcactttataatctctgtgtgacttaagtcac 3742437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 162; Significance: 5e-86; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 162; E-Value: 5e-86
Query Start/End: Original strand, 362 - 729
Target Start/End: Complemental strand, 24608354 - 24607985
Alignment:
Q  362 agatttcttctcttctccctatacttttctctcgcacccagctgaaaa-acattaatgcccctgtgctagttaagc-atgcagcgtgacttaactagcac 459  Q
    |||||||| |||||| ||||  |||| || || ||||||||||||||| ||| |||||||||||   ||||||||  | |||||| |||||||||||| |    
T  24608354 agatttctcctcttcaccctgcacttatcgctggcacccagctgaaaagacaataatgcccctgcattagttaagttacgcagcgagacttaactagcgc 24608255  T
Q  460 accttataatctttgcgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgcagcttgactggtggtcagaactgaagaactcacgttt 559  Q
    ||||||||||||||| |||| |||||||||||| |||||| |||||||||||||||||||||||  ||| | |||||| ||| || || ||| |||| ||    
T  24608254 accttataatctttgtgtgagttaagtcacgcatcactggtatgtgcgcgagttaactcacgcaagttggccggtggttagagctcaaaaacacacgctt 24608155  T
Q  560 tttgaaccgtgttcaaagcattttaattggttttgtatgtttttgttaaaaaatttcacgtgtttttactatatttatggtagatataacctatgttaca 659  Q
    |||| ||  || |||| |||||||||||||||||| | |||||||||||    |||||||| |||| |||||||||||||||||||||||||||||||||    
T  24608154 tttggactttggtcaatgcattttaattggttttgcacgtttttgttaagttttttcacgttttttgactatatttatggtagatataacctatgttaca 24608055  T
Q  660 atctccccctataaatacacctctaaacttccccatttcctcacaccatctcacattctaactctcttcc 729  Q
    ||||||| |||||||||| |||||||| || |||||||||||||||||||||||||||  ||||||||||    
T  24608054 atctccctctataaatacccctctaaattttcccatttcctcacaccatctcacattcccactctcttcc 24607985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 473 - 713
Target Start/End: Complemental strand, 40962781 - 40962538
Alignment:
Q  473 tgcgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgcagcttgactggt-ggtcagaactgaagaactcacgttttttgaaccgtgt 571  Q
    ||||||| ||||||||| |||||||||||| ||| ||||||||||||||||| ||| | ||| ||||||| || |||||  ||||||||||| ||  ||     
T  40962781 tgcgtgagttaagtcacacaccactggcatttgcacgagttaactcacgcaggttggccggttggtcagagctcaagaatacacgttttttggactttgg 40962682  T
Q  572 tcaaagcattttaattggttttgtatgtttttgttaaaaaattt--cacgtgtttttactatatttatggtagatataacctatgttacaatctccccct 669  Q
    ||||   |||||||||||||||| | |||||| |||     |||  ||| | |||| ||||||||||||||||||||||||||||||||||||||| | |    
T  40962681 tcaagtgattttaattggttttgcacgttttttttactttgttttacacattttttgactatatttatggtagatataacctatgttacaatctcctcat 40962582  T
Q  670 ataaatacacctctaaacttccccatttcctcacaccatctcac 713  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  40962581 ataaatacacctccaaacttccccatttcctcacaccatctcac 40962538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 569 - 735
Target Start/End: Original strand, 46815193 - 46815360
Alignment:
Q  569 tgttcaaagcattttaattggttttgtatgtttttgttaaaaaatttcacgtgtttttactatatttatggtagatataacctatgttacaatctccccc 668  Q
    ||||||| |||||||||||| ||||  | ||||||||||| |  |  ||||| |||| ||  ||||||||||||||||||||||||||||||||||||||    
T  46815193 tgttcaatgcattttaattgtttttacacgtttttgttaagatttaacacgttttttgaccctatttatggtagatataacctatgttacaatctccccc 46815292  T
Q  669 tataaatacacctct-aaacttccccatttcctcacaccatctcacattctaactctcttcctcactc 735  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||| |||||||||    
T  46815293 tataaatacacctctaaaacttccccatttcctcacaccaactcacattctcactctcctcctcactc 46815360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 569 - 735
Target Start/End: Original strand, 33163083 - 33163249
Alignment:
Q  569 tgttcaaagcattttaattggttttgtatgtttttgttaaaaaatttcacgtgtttttactatatttatggtagatataacctatgttacaatctccccc 668  Q
    ||||||| |||||||||||| ||||  | ||||||||||| |  |  ||||| |||| ||  || |||||||||||||||||||||||||||||||||||    
T  33163083 tgttcaatgcattttaattgtttttacacgtttttgttaagatttaacacgttttttgaccctacttatggtagatataacctatgttacaatctccccc 33163182  T
Q  669 tataaatacacctctaaacttccccatttcctcacaccatctcacattctaactctcttcctcactc 735  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| | |||||| |||||||||    
T  33163183 tataaatacacctctaaacttccccatttcctcacaccaactcacattttcactctcctcctcactc 33163249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 442 - 562
Target Start/End: Complemental strand, 49065669 - 49065549
Alignment:
Q  442 gcgtgacttaactagcacaccttataatctttgcgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgcagcttgactggtggtcaga 541  Q
    |||||||||||||||| |||||||||| || ||||||| |||||||||||||||||||| | |||||||||||||||||||| |||| | ||||||||||    
T  49065669 gcgtgacttaactagcgcaccttataaactatgcgtgacttaagtcacgcaccactggcctatgcgcgagttaactcacgcaccttggccggtggtcaga 49065570  T
Q  542 actgaagaactcacgtttttt 562  Q
     |||||||||  |||||||||    
T  49065569 gctgaagaacaaacgtttttt 49065549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 631 - 735
Target Start/End: Original strand, 53267272 - 53267376
Alignment:
Q  631 tatttatggtagatataacctatgttacaatctccccctataaatacacctctaaacttccccatttcctcacaccatctcacattctaactctcttcct 730  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| || ||| ||||||||| |||||| ||||    
T  53267272 tatttgtggtagatataacctatgttacaatctccccctataaatacacctctaaacttcttcatttcctcgcagcatttcacattctcactctcctcct 53267371  T
Q  731 cactc 735  Q
    |||||    
T  53267372 cactc 53267376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 415 - 563
Target Start/End: Complemental strand, 21713311 - 21713162
Alignment:
Q  415 aatgcccctgtgctagttaag-catgcagcgtgacttaactagcacaccttataatctttgcgtgaattaagtcacgcaccactggcatgtgcgcgagtt 513  Q
    ||||||| || |||||||||| || ||||||||| ||||||||| ||||||||||||| ||||||  ||||||||||||||| |||| | ||| ||||||    
T  21713311 aatgcccttgcgctagttaagtcacgcagcgtgatttaactagcgcaccttataatctatgcgtggcttaagtcacgcaccaatggcctatgcacgagtt 21713212  T
Q  514 aactcacgcagcttgactggtggtcagaactgaagaactcacgttttttg 563  Q
    |||||||||| | || | |||||||||| |||||||||  ||||||||||    
T  21713211 aactcacgcaacatggccggtggtcagagctgaagaacaaacgttttttg 21713162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 616 - 718
Target Start/End: Complemental strand, 13867749 - 13867647
Alignment:
Q  616 cacgtgtttttactatatttatggtagatataacctatgttacaatctccccctataaatacacctctaaacttccccatttcctcacaccatctcacat 715  Q
    ||||| |||| ||||||||||| |||| ||||||||||||||| ||  || ||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  13867749 cacgttttttgactatatttattgtagttataacctatgttaccattcccacctataaatactcctccaaacttccccatttcctcacaccatctcacat 13867650  T
Q  716 tct 718  Q
    |||    
T  13867649 tct 13867647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 569 - 701
Target Start/End: Original strand, 28797930 - 28798063
Alignment:
Q  569 tgttcaaagcattttaattggttttgtatgtttttgttaaaaaattt-cacgtgtttttactatatttatggtagatataacctatgttacaatctcccc 667  Q
    ||||||| |||||||||||| ||||  | |||||||||||| | ||  ||| | |||| ||  ||||||||||||||| |||||||||||||||||||||    
T  28797930 tgttcaatgcattttaattgtttttacacgtttttgttaaagatttaacacattttttgaccctatttatggtagatacaacctatgttacaatctcccc 28798029  T
Q  668 ctataaatacacctctaaacttccccatttcctc 701  Q
     |||||| ||||||||||||||||||||||||||    
T  28798030 ttataaaaacacctctaaacttccccatttcctc 28798063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 419 - 574
Target Start/End: Original strand, 42038959 - 42039115
Alignment:
Q  419 cccctgtgctagttaag-catgcagcgtgacttaactagcacaccttataatctttgcgtgaattaagtcacgcaccactggcatgtgcgcgagttaact 517  Q
    |||||| | |||||||| || |||||||||| |||| ||||||||||||||    ||||    ||| |||||||||||||||| ||||||||||||||||    
T  42038959 cccctgcgttagttaagtcacgcagcgtgacctaaccagcacaccttataacaactgcgcaccttatgtcacgcaccactggcctgtgcgcgagttaact 42039058  T
Q  518 cacgcagcttgactggtggtcagaactgaagaactcacgttttttgaaccgtgttca 574  Q
    ||||||  ||| | ||||||||||||||||||||  |||||||||| || |||||||    
T  42039059 cacgcacgttggccggtggtcagaactgaagaacagacgttttttggacggtgttca 42039115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 670 - 735
Target Start/End: Complemental strand, 36173175 - 36173110
Alignment:
Q  670 ataaatacacctctaaacttccccatttcctcacaccatctcacattctaactctcttcctcactc 735  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||    
T  36173175 ataaatacacctctaaacttccccatttcctcacaccatctcacattcccactctcctcctcactc 36173110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 443 - 562
Target Start/End: Complemental strand, 9243036 - 9242917
Alignment:
Q  443 cgtgacttaactagcacaccttataatctttgcgtgaattaagtcacgcaccactg-gcatgtgcgcgagttaactcacgcagcttgactggtggtcaga 541  Q
    ||||||||||||  ||||||||||||||| ||||||| |||||||||||||||||| || | | ||||||||||||||||||  ||| | ||| ||||||    
T  9243036 cgtgacttaactcacacaccttataatctctgcgtgacttaagtcacgcaccactgagcct-tccgcgagttaactcacgcaagttggccggtagtcaga 9242938  T
Q  542 actgaagaactcacgtttttt 562  Q
    ||||||||||  |||||||||    
T  9242937 actgaagaacaaacgtttttt 9242917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 442 - 564
Target Start/End: Complemental strand, 27761248 - 27761126
Alignment:
Q  442 gcgtgacttaactagcacaccttataatctttgcgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgcagcttgactggtggtcaga 541  Q
    |||||| |||| | || ||||||||||||| ||||||| ||||||||||||||||| || | ||||||||||||||||| ||  ||| | ||| ||||||    
T  27761248 gcgtgatttaatttgcgcaccttataatctctgcgtgacttaagtcacgcaccactagcctatgcgcgagttaactcacacacgttggccggtagtcaga 27761149  T
Q  542 actgaagaactcacgttttttga 564  Q
    ||| ||||||  |||||||||||    
T  27761148 actcaagaacaaacgttttttga 27761126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 622 - 735
Target Start/End: Complemental strand, 49261720 - 49261607
Alignment:
Q  622 tttttactatatttatggtagatataacctatgttacaatctccccctataaatacacctctaaacttccccatttcctcacaccatctcacattctaac 721  Q
    ||||||||| |||||| ||||  ||||| |||||||| ||  || ||||||||||  |||| |||||||| |||||||||||| ||||||||||||| ||    
T  49261720 tttttactacatttattgtagtcataacatatgttactattcccacctataaatatccctccaaacttcctcatttcctcacatcatctcacattctcac 49261621  T
Q  722 tctcttcctcactc 735  Q
    |||| |||||||||    
T  49261620 tctcctcctcactc 49261607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 622 - 718
Target Start/End: Original strand, 40221095 - 40221191
Alignment:
Q  622 tttttactatatttatggtagatataacctatgttacaatctccccctataaatacacctctaaacttccccatttcctcacaccatctcacattct 718  Q
    ||||||||| ||||||||||  ||||||||||||||| ||  || ||| ||||| | |||| |||||||| ||||||||||||||||||||||||||    
T  40221095 tttttactacatttatggtatttataacctatgttaccattcccacctgtaaatgcccctccaaacttcctcatttcctcacaccatctcacattct 40221191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 616 - 718
Target Start/End: Complemental strand, 13856027 - 13855925
Alignment:
Q  616 cacgtgtttttactatatttatggtagatataacctatgttacaatctccccctataaatacacctctaaacttccccatttcctcacaccatctcacat 715  Q
    ||||| |||| |||||||| || |||| ||||||||||||||| ||  || ||||||||||  |||| ||| |||| |||||||||||||||||||||||    
T  13856027 cacgttttttgactatattaattgtagttataacctatgttaccattcccacctataaatatccctccaaaattcctcatttcctcacaccatctcacat 13855928  T
Q  716 tct 718  Q
    |||    
T  13855927 tct 13855925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 622 - 735
Target Start/End: Original strand, 372822 - 372935
Alignment:
Q  622 tttttactatatttatggtagatataacctatgttacaatctccccctataaatacacctctaaacttccccatttcctcacaccatctcacattctaac 721  Q
    ||||||||  |||||| |||| |||||| |||||||| ||  || ||||||||| | |||| |||||||||||||| |||||||||||||||||| | |     
T  372822 tttttactgcatttattgtagttataacatatgttaccattcccacctataaattcccctccaaacttccccattttctcacaccatctcacattttcat 372921  T
Q  722 tctcttcctcactc 735  Q
    || |||||||||||    
T  372922 tcacttcctcactc 372935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 470 - 566
Target Start/End: Complemental strand, 31936413 - 31936317
Alignment:
Q  470 ctttgcgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgcagcttgactggtggtcagaactgaagaactcacgttttttgaac 566  Q
    ||||| |||| |||||||||||||||||||| || |||||||||||||||||||| ||| | | ||||| || || || ||| ||||||||||||||    
T  31936413 ctttgtgtgacttaagtcacgcaccactggcctgggcgcgagttaactcacgcaggttggccgatggtctgagctcaaaaacacacgttttttgaac 31936317  T

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Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 481 - 563
Target Start/End: Original strand, 372703 - 372785
Alignment:
Q  481 ttaagtcacgcaccactggcatgtgcgcgagttaactcacgcagcttgactggtggtcagaactgaagaactcacgttttttg 563  Q
    ||||||||||||||||||||||||||| |||||||  ||||||| ||| | ||||||| || || |||||| |||||||||||    
T  372703 ttaagtcacgcaccactggcatgtgcgtgagttaatccacgcaggttggccggtggtctgagctcaagaacacacgttttttg 372785  T

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Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 445 - 563
Target Start/End: Original strand, 38131410 - 38131528
Alignment:
Q  445 tgacttaactagcacaccttataatctttgcgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgcagcttgactggtggtcagaact 544  Q
    |||||||||| || |||||| ||| || || |||| |||||||||||||||| ||| | ||| ||||||||||||||||  ||  | |||||||| ||||    
T  38131410 tgacttaacttgcgcaccttctaacctctgtgtgacttaagtcacgcaccacgggcctatgcacgagttaactcacgcacgttagccggtggtcacaact 38131509  T
Q  545 gaagaactcacgttttttg 563  Q
    |||||||  ||||||||||    
T  38131510 gaagaacaaacgttttttg 38131528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 439 - 523
Target Start/End: Original strand, 2777940 - 2778024
Alignment:
Q  439 gcagcgtgacttaactagcacaccttataatctttgcgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgca 523  Q
    ||||||||||||||||  | ||||||||||  | ||||| | ||||||||| | |||||||| ||||||||||||||||||||||    
T  2777940 gcagcgtgacttaactcacgcaccttataagttctgcgtaacttaagtcacacgccactggcctgtgcgcgagttaactcacgca 2778024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 622 - 716
Target Start/End: Complemental strand, 18414113 - 18414019
Alignment:
Q  622 tttttactatatttatggtagatataacctatgttacaatctccccctataaatacacctctaaacttccccatttcctcacaccatctcacatt 716  Q
    ||||||||| ||||||||||| ||||||||||||||  ||  || |||||| |||| |||| |||||||| ||||| |||||| ||| |||||||    
T  18414113 tttttactacatttatggtagttataacctatgttatcattcccacctatatatactcctccaaacttcctcattttctcacatcatttcacatt 18414019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 481 - 563
Target Start/End: Original strand, 32935692 - 32935774
Alignment:
Q  481 ttaagtcacgcaccactggcatgtgcgcgagttaactcacgcagcttgactggtggtcagaactgaagaactcacgttttttg 563  Q
    ||||||||||||||||| || | ||||||||||||||||||||  ||| | ||||| |||| |||||||||  ||||||||||    
T  32935692 ttaagtcacgcaccacttgcctatgcgcgagttaactcacgcacgttggccggtggccagagctgaagaacaaacgttttttg 32935774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 444 - 519
Target Start/End: Original strand, 14289680 - 14289755
Alignment:
Q  444 gtgacttaactagcacaccttataatctttgcgtgaattaagtcacgcaccactggcatgtgcgcgagttaactca 519  Q
    |||||||||||||| ||||||||||| | || |||| ||||||||| ||||||||   | ||||||||||||||||    
T  14289680 gtgacttaactagcgcaccttataatatatgtgtgacttaagtcacacaccactgatctatgcgcgagttaactca 14289755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 481 - 563
Target Start/End: Complemental strand, 16525160 - 16525077
Alignment:
Q  481 ttaagtcacgcaccactggcatgtgcgcgagttaactcacgcagcttgactgg-tggtcagaactgaagaactcacgttttttg 563  Q
    |||| |||||||||| ||||||| | |||||||||||||||||| ||||| || |||||||| || || ||| |||||||||||    
T  16525160 ttaactcacgcaccattggcatgggtgcgagttaactcacgcaggttgacgggttggtcagagctcaaaaacacacgttttttg 16525077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 474 - 524
Target Start/End: Complemental strand, 49261871 - 49261821
Alignment:
Q  474 gcgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgcag 524  Q
    |||||| |||||||||||||||||| ||||||||| ||||||| |||||||    
T  49261871 gcgtgacttaagtcacgcaccactgacatgtgcgcaagttaacccacgcag 49261821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 504 - 563
Target Start/End: Original strand, 31823039 - 31823098
Alignment:
Q  504 tgcgcgagttaactcacgcagcttgactggtggtcagaactgaagaactcacgttttttg 563  Q
    |||| |||||||||||||||  ||| | ||||||||||||||||||||  ||||||||||    
T  31823039 tgcgtgagttaactcacgcacgttggccggtggtcagaactgaagaacaaacgttttttg 31823098  T

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Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 632 - 718
Target Start/End: Complemental strand, 31936251 - 31936165
Alignment:
Q  632 atttatggtagatataacctatgttacaatctccccctataaatacacctctaaacttccccatttcctcacaccatctcacattct 718  Q
    ||||||||||| |||||||||| |||| ||   | ||||||||||| |||| | ||||||| ||||||||||| ||| |||| ||||    
T  31936251 atttatggtagttataacctatattaccattctcacctataaatacccctccatacttccctatttcctcacagcatatcactttct 31936165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 474 - 563
Target Start/End: Complemental strand, 13856148 - 13856059
Alignment:
Q  474 gcgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgcagcttgactggtggtcagaactgaagaactcacgttttttg 563  Q
    |||||| |||||||||||| |||||||   ||| | ||||||||||||||| ||| | ||||||| || || |||||| || ||||||||    
T  13856148 gcgtgacttaagtcacgcatcactggccgatgcacaagttaactcacgcaggttggccggtggtctgagctcaagaacacaggttttttg 13856059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 669 - 714
Target Start/End: Complemental strand, 14990200 - 14990155
Alignment:
Q  669 tataaatacacctctaaacttccccatttcctcacaccatctcaca 714  Q
    ||||||||| |||| |||||||||||||| | ||||||||||||||    
T  14990200 tataaatacccctccaaacttccccattttcccacaccatctcaca 14990155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 444 - 493
Target Start/End: Original strand, 31823010 - 31823059
Alignment:
Q  444 gtgacttaactagcacaccttataatctttgcgtgaattaagtcacgcac 493  Q
    ||||||||||| || |||||||||| |||||||||| |||| ||||||||    
T  31823010 gtgacttaacttgcgcaccttataagctttgcgtgagttaactcacgcac 31823059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 159; Significance: 3e-84; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 358 - 716
Target Start/End: Original strand, 14995068 - 14995430
Alignment:
Q  358 ttttagatttcttctcttctccctatacttttctctcgcacccagctgaaaa-acattaatgcccctgtgctagttaag-catgcagcgtgacttaacta 455  Q
    |||||||||| | |||||| ||||  |||||||  ||||||||||||||||| |||||||| |||||  |||||||||| || |||||||||||||||||    
T  14995068 ttttagatttttgctcttcgccctgcacttttcattcgcacccagctgaaaagacattaatacccctacgctagttaagtcacgcagcgtgacttaacta 14995167  T
Q  456 gcacaccttataatctttgcgtgaattaagtcacgcaccactggcatgt-gcgcgagttaactcacgcagcttgactggtggtcagaactgaagaactca 554  Q
     |||||||||||||||||| |||| ||||||||| |||||||| ||| | |||||||||||||||||||  ||| |  || | |||||||||||||| ||    
T  14995168 acacaccttataatctttgtgtgagttaagtcacacaccactgacattttgcgcgagttaactcacgcacattggccagtagccagaactgaagaacaca 14995267  T
Q  555 cgttttttgaaccgtgttcaaagcattttaattggttttgtatgtttttgttaaaaaatttcacgtgttttt-actatatttatggtagatataacctat 653  Q
     |||||||| || |||||||| |||||||||||||||||| | ||||||||||     |||||||| ||||| ||||||||||||||||||| |||||||    
T  14995268 tgttttttggacggtgttcaatgcattttaattggttttgcacgtttttgttatgttttttcacgtttttttgactatatttatggtagatacaacctat 14995367  T
Q  654 gttacaatctccccctataaatacacctctaaacttccccatttcctcacaccatctcacatt 716  Q
    |||||||||||| ||||||||||||||| |||| || ||||||| ||||||||||||||||||    
T  14995368 gttacaatctcctcctataaatacacctataaaatttcccattttctcacaccatctcacatt 14995430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 442 - 735
Target Start/End: Complemental strand, 6755833 - 6755540
Alignment:
Q  442 gcgtgacttaactagcacaccttataatctttgcgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgcagcttgactggtggtcaga 541  Q
    |||||||||||||  | |||||||||| ||||| |||| ||||||||| |||||||||||||||||||||||||||||||||  ||| | |||||| |||    
T  6755833 gcgtgacttaactcacgcaccttataagctttgtgtgacttaagtcacacaccactggcatgtgcgcgagttaactcacgcaagttggccggtggttaga 6755734  T
Q  542 actgaagaactcacgttttttgaaccgtgttcaaagcattttaattggttttgtatgtttttgttaaaaaatttcacgtgtttttactatatttatggta 641  Q
     || |||||| ||||||||||| ||  ||||||| |||||||||||| ||||| | ||||||||| |    |||||||| |||| |||||||||||||||    
T  6755733 gctcaagaacacacgttttttggactttgttcaatgcattttaattgattttgcacgtttttgtttagttttttcacgttttttgactatatttatggta 6755634  T
Q  642 gatataacctatgttacaatctccccctataaatacacctctaaacttccccatttcctcacaccatctcacattctaactctcttcctcactc 735  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||| |||||| |||||||||    
T  6755633 gatataacctatgttacaatctccccctataaatacatctctaaactttcccatttcctcacaccatctcatattctcactctcatcctcactc 6755540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 442 - 734
Target Start/End: Original strand, 6462964 - 6463257
Alignment:
Q  442 gcgtgacttaactagcacaccttataatctttgcgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgcagcttgactggtggtcaga 541  Q
    |||||||||||||  | |||||||||| ||||| |||| ||||||||||||||||||||||||| | |||||||||||||||  ||| | |||||| | |    
T  6462964 gcgtgacttaactcacgcaccttataagctttgtgtgacttaagtcacgcaccactggcatgtgtgtgagttaactcacgcaagttggccggtggttaaa 6463063  T
Q  542 actgaagaactcacgttttttgaaccgtgttcaaagcattttaattggttttgtatgtttttgttaaaaaatttcacgtgttttt-actatatttatggt 640  Q
     || ||||||  | |||||||| ||  ||||||| |||||||||||||||||| | |||||||||||    |||||||| ||||| ||||||||||||||    
T  6463064 gctcaagaacaaatgttttttggactttgttcaatgcattttaattggttttgcacgtttttgttaagttttttcacgtttttttgactatatttatggt 6463163  T
Q  641 agatataacctatgttacaatctccccctataaatacacctctaaacttccccatttcctcacaccatctcacattctaactctcttcctcact 734  Q
    ||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  6463164 agatataacctattttacaatctccccttaaaaatacacctctaaacttccccatttcctcacaccatctcacattctcactctcatcctcact 6463257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 419 - 656
Target Start/End: Complemental strand, 7956403 - 7956166
Alignment:
Q  419 cccctgtgctagttaag-catgcagcgtgacttaactagcacaccttataatctttgcgtgaattaagtcacgcaccactggcatgtgcgcgagttaact 517  Q
    |||||| |||||||||| || ||||| ||||||||||||| |||||||||   | ||||||| ||||| ||| |||||||| ||||||||||||||||||    
T  7956403 cccctgcgctagttaagtcacgcagcatgacttaactagcgcaccttatatggtgtgcgtgagttaagacacacaccactgacatgtgcgcgagttaact 7956304  T
Q  518 cacgcagcttgactggtggtcagaactgaagaactcacgttttttgaaccgtgttcaaagcattttaattggttttgtatgtttttgttaaaaaatttca 617  Q
    || |||| |||   || ||||| || |||||||| ||||||||||| || |||||||| |||||||||||||||||| | |||||||||||    |||||    
T  7956303 catgcaggttgttcgggggtcaaaattgaagaacacacgttttttggacggtgttcaatgcattttaattggttttgcacgtttttgttaagtt-tttca 7956205  T
Q  618 cgtgtttttactatatttatggtagatataacctatgtt 656  Q
    ||| |||||||||||||||| ||||||||||||||||||    
T  7956204 cgtttttttactatatttatagtagatataacctatgtt 7956166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 631 - 735
Target Start/End: Original strand, 53825747 - 53825851
Alignment:
Q  631 tatttatggtagatataacctatgttacaatctccccctataaatacacctctaaacttccccatttcctcacaccatctcacattctaactctcttcct 730  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  53825747 tatttatggtagatataacctatgttacaatctccccctataaatacacctctaaacttccccatttcctcacaccatctcacattctcactctcctcct 53825846  T
Q  731 cactc 735  Q
    |||||    
T  53825847 cactc 53825851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 631 - 735
Target Start/End: Original strand, 42948915 - 42949019
Alignment:
Q  631 tatttatggtagatataacctatgttacaatctccccctataaatacacctctaaacttccccatttcctcacaccatctcacattctaactctcttcct 730  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||| ||||    
T  42948915 tatttatggtagatataacctatgctacaatctccccctataaatacacctctaaacttccccatttcctcacaccatctcatattctcaccctcctcct 42949014  T
Q  731 cactc 735  Q
    |||||    
T  42949015 cactc 42949019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 631 - 711
Target Start/End: Complemental strand, 2324137 - 2324057
Alignment:
Q  631 tatttatggtagatataacctatgttacaatctccccctataaatacacctctaaacttccccatttcctcacaccatctc 711  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  2324137 tatttatggtagatataacctatgttataatctccccctatatatacacctctaaactttcccatttcctcacaccatctc 2324057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 546 - 703
Target Start/End: Complemental strand, 42384576 - 42384420
Alignment:
Q  546 aagaactcacgttttttgaaccgtgttcaaagcattttaattggttttgtatgtttttgttaaaaaatttcacgtgtttttactatatttatggtagata 645  Q
    |||||| |||||||||||| |  ||||||| |||||||||||  ||||  |||||| |||||| |  |  ||| | |||| ||  ||||||||||| |||    
T  42384576 aagaacacacgttttttga-ctttgttcaatgcattttaattatttttacatgtttctgttaagatttaacacattttttgaccctatttatggtacata 42384478  T
Q  646 taacctatgttacaatctccccctataaatacacctctaaacttccccatttcctcac 703  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  42384477 taacctatgttacaatctccccctataaatacacctctaaactttcccatttcctcac 42384420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 648 - 718
Target Start/End: Complemental strand, 7955585 - 7955515
Alignment:
Q  648 acctatgttacaatctccccctataaatacacctctaaacttccccatttcctcacaccatctcacattct 718  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  7955585 acctatgttacaatctccccttataaatacacctctaaacttctccatttcctcacaccatctcacattct 7955515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 442 - 563
Target Start/End: Original strand, 39415314 - 39415435
Alignment:
Q  442 gcgtgacttaactagcacaccttataatctttgcgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgcagcttgactggtggtcaga 541  Q
    ||||||||||||| || |||||||||| || ||||||| |||||||||||||||||||| |||||| |||||||||||||||  ||| | | |||| |||    
T  39415314 gcgtgacttaacttgcgcaccttataacctctgcgtgacttaagtcacgcaccactggcctgtgcgtgagttaactcacgcacgttggccgatggttaga 39415413  T
Q  542 actgaagaactcacgttttttg 563  Q
    ||||||||||  ||||||||||    
T  39415414 actgaagaacaaacgttttttg 39415435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 415 - 563
Target Start/End: Original strand, 25574767 - 25574916
Alignment:
Q  415 aatgcccctgtgctagttaag-catgcagcgtgacttaactagcacaccttataatctttgcgtgaattaagtcacgcaccactggcatgtgcgcgagtt 513  Q
    ||||||| || || ||||||| ||||| ||||||||||||| |  |||||| ||| || || |||| |||||||||||||||||||| | ||||||||||    
T  25574767 aatgcccttgcgcaagttaagtcatgccgcgtgacttaacttgtgcaccttgtaacctctgtgtgacttaagtcacgcaccactggcctatgcgcgagtt 25574866  T
Q  514 aactcacgcagcttgactggtggtcagaactgaagaactcacgttttttg 563  Q
    ||||||||||  |||   ||||||||||||||||||||  ||||||||||    
T  25574867 aactcacgcacgttggtcggtggtcagaactgaagaacaaacgttttttg 25574916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 442 - 563
Target Start/End: Original strand, 48086811 - 48086932
Alignment:
Q  442 gcgtgacttaactagcacaccttataatctttgcgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgcagcttgactggtggtcaga 541  Q
    ||||||||||||| || |||||||||| || ||| ||| |||||||||||||||||||| | ||||||||||||||||||||  ||| | ||||||||||    
T  48086811 gcgtgacttaacttgcgcaccttataacctctgcatgacttaagtcacgcaccactggcctatgcgcgagttaactcacgcacgttggccggtggtcaga 48086910  T
Q  542 actgaagaactcacgttttttg 563  Q
    |||||  |||  ||||||||||    
T  48086911 actgactaacaaacgttttttg 48086932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 622 - 732
Target Start/End: Original strand, 25886181 - 25886291
Alignment:
Q  622 tttttactatatttatggtagatataacctatgttacaatctccccctataaatacacctctaaacttccccatttcctcacaccatctcacattctaac 721  Q
    |||| |||| ||||||||||| |||||||||| |||  ||  || ||||||||||  |||| ||||||| ||||||||||||||||||||||| ||| ||    
T  25886181 ttttgactacatttatggtagttataacctatcttatcattcccacctataaatatccctccaaacttctccatttcctcacaccatctcacactctcac 25886280  T
Q  722 tctcttcctca 732  Q
    |||| ||||||    
T  25886281 tctcctcctca 25886291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 613 - 717
Target Start/End: Complemental strand, 25745076 - 25744971
Alignment:
Q  613 tttcacgtgtttttactatatttatggtagatataacctatgttacaatctccccctataaatacacctctaaactt-ccccatttcctcacaccatctc 711  Q
    |||||||| |||| |||||||||||||||| |||||||||| |||  ||  || | ||||||||| ||||  ||||| |||||||| || ||||||||||    
T  25745076 tttcacgttttttgactatatttatggtagttataacctattttattattcccacttataaatacccctcctaacttcccccattttcttacaccatctc 25744977  T
Q  712 acattc 717  Q
    ||||||    
T  25744976 acattc 25744971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 632 - 718
Target Start/End: Original strand, 48087001 - 48087087
Alignment:
Q  632 atttatggtagatataacctatgttacaatctccccctataaatacacctctaaacttccccatttcctcacaccatctcacattct 718  Q
    ||||||||| |||||||||||   ||| ||  || ||||||||||| |||| | ||||||| |||||||||||||||||||| ||||    
T  48087001 atttatggtggatataacctacactaccattcccacctataaatacccctccatacttccctatttcctcacaccatctcactttct 48087087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 453 - 498
Target Start/End: Complemental strand, 37282227 - 37282182
Alignment:
Q  453 ctagcacaccttataatctttgcgtgaattaagtcacgcaccactg 498  Q
    ||||| |||||||||| |||||||||| ||||||||||||||||||    
T  37282227 ctagcgcaccttataagctttgcgtgacttaagtcacgcaccactg 37282182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 415 - 498
Target Start/End: Original strand, 23029588 - 23029672
Alignment:
Q  415 aatgcccctgtgctagttaag-catgcagcgtgacttaactagcacaccttataatctttgcgtgaattaagtcacgcaccactg 498  Q
    ||||||| || |||||||||| || ||||||||||||||||  | || || |||| |||||||||| |||||||| |||||||||    
T  23029588 aatgcccttgcgctagttaagtcacgcagcgtgacttaactcacgcatctcataagctttgcgtgacttaagtcatgcaccactg 23029672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 630 - 718
Target Start/End: Original strand, 39415502 - 39415590
Alignment:
Q  630 atatttatggtagatataacctatgttacaatctccccctataaatacacctctaaacttccccatttcctcacaccatctcacattct 718  Q
    ||||||||||| | |||||||||   ||| ||  || ||||||||||| |||| | ||||||| |||||||||||||||||||| ||||    
T  39415502 atatttatggtggttataacctacactaccattcccacctataaatacccctccatacttccctatttcctcacaccatctcactttct 39415590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 667 - 718
Target Start/End: Original strand, 25575020 - 25575071
Alignment:
Q  667 cctataaatacacctctaaacttccccatttcctcacaccatctcacattct 718  Q
    ||||||||||| |||| | ||||||| |||||||||||||||||||| ||||    
T  25575020 cctataaatactcctccatacttccctatttcctcacaccatctcactttct 25575071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 439 - 603
Target Start/End: Complemental strand, 25745259 - 25745095
Alignment:
Q  439 gcagcgtgacttaactagcacaccttataatctttgcgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgcagcttgactg-gtggt 537  Q
    ||||| ||||||||||  |||||||||||  || ||||||| ||||||||||| ||  ||||   ||| ||||||||||||||||| ||| | |  ||||    
T  25745259 gcagcatgacttaactcacacaccttatag-ctctgcgtgacttaagtcacgctcctttggccgctgcacgagttaactcacgcaggttggccgattggt 25745161  T
Q  538 cagaactgaagaactcacgttttttgaaccgtgttcaaagcattttaattggttttgtatgttttt 603  Q
    |||| || |||||| |||| |||||| ||  || |||| |||||||||| | ||||  ||||||||    
T  25745160 cagagctcaagaacacacggtttttggactttggtcaatgcattttaatggtttttacatgttttt 25745095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 426 - 498
Target Start/End: Complemental strand, 49742234 - 49742161
Alignment:
Q  426 gctagttaag-catgcagcgtgacttaactagcacaccttataatctttgcgtgaattaagtcacgcaccactg 498  Q
    |||||||||| || ||||||||||||||||  | ||||| | || || ||||||| ||||||||||||||||||    
T  49742234 gctagttaagtcacgcagcgtgacttaactcacgcacctcacaagctctgcgtgacttaagtcacgcaccactg 49742161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 481 - 522
Target Start/End: Original strand, 50561451 - 50561492
Alignment:
Q  481 ttaagtcacgcaccactggcatgtgcgcgagttaactcacgc 522  Q
    |||||||| |||||||| || |||||||||||||||||||||    
T  50561451 ttaagtcatgcaccacttgcctgtgcgcgagttaactcacgc 50561492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 138; Significance: 1e-71; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 363 - 716
Target Start/End: Original strand, 47983569 - 47983915
Alignment:
Q  363 gatttcttctcttctccctatacttttctctcgcacccagctgaaaa-acattaatgcccctgtgctagttaag-catgcagcgtgacttaactagcaca 460  Q
    ||||||| |||||| ||||  ||||||| ||| ||| |||||||||| ||  ||||||||||||| || ||||| || ||||||||||||||||| | ||    
T  47983569 gatttctgctcttccccctgcacttttcgctcccactcagctgaaaagaccataatgcccctgtgttatttaagtcacgcagcgtgacttaactaacgca 47983668  T
Q  461 ccttataatctttgcgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgcagcttgactggtggtcagaactgaagaactcacgtttt 560  Q
    |||||||   | ||||||| |||||||||  |||||||||||||||||||||||||| |||||  ||| | ||||||||||||| |||||| ||||||||    
T  47983669 ccttatatgttctgcgtgagttaagtcacttaccactggcatgtgcgcgagttaactgacgcacgttggccggtggtcagaactaaagaacacacgtttt 47983768  T
Q  561 ttgaaccgtg-ttcaaagcattttaattggttttgtatgtttttgttaaaaaatttcacgtgtttttactatatttatggtagatataacctatgttaca 659  Q
    ||| || ||| ||||| |||||||||||||||||| | |||||||||||          || |||| ||||||||||||||| |||||||||||||||||    
T  47983769 ttggacggtgtttcaatgcattttaattggttttgcacgtttttgttaa----------gttttttgactatatttatggtaaatataacctatgttaca 47983858  T
Q  660 atctccccctataaatacacctctaaacttccccatttcctcacaccatctcacatt 716  Q
    |||||||| ||||||||||||||||||||||||  |||||||||| |||||||||||    
T  47983859 atctccccttataaatacacctctaaacttcccattttcctcacatcatctcacatt 47983915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 445 - 714
Target Start/End: Complemental strand, 18844093 - 18843823
Alignment:
Q  445 tgacttaactagcacaccttataatctttgcgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgcagcttgactggtggtcagaact 544  Q
    ||||||||||| ||||| |||||   | ||||||| ||||||||| ||||||||| |||||||| ||||||||||||||  ||| | |||| ||||||||    
T  18844093 tgacttaactaacacactttatatgttctgcgtgacttaagtcacacaccactggtatgtgcgcaagttaactcacgcacgttggccggtgatcagaact 18843994  T
Q  545 gaagaactcacgttttttgaaccgtgttcaaagcattttaattggttttgtatgtttttgttaaaaaatttcacgtgttttt-actatatttatggtaga 643  Q
    ||||||| ||||||||||  || |||||||| |||||||||||| ||||||| |||||||||||    || ||||| ||||| |||||||||||||||||    
T  18843993 gaagaacacacgttttttagacggtgttcaatgcattttaattgattttgtacgtttttgttaagttgttgcacgtttttttgactatatttatggtaga 18843894  T
Q  644 tataacctatgttacaatctccccctataaatacacctctaaacttccccatttcctcacaccatctcaca 714  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||    
T  18843893 tataatctatgttacaatctccccctataaatacacctctaaactccctcatttcctcacacaatctcaca 18843823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 448 - 735
Target Start/End: Complemental strand, 5766935 - 5766647
Alignment:
Q  448 cttaactagcacaccttataatctttgcgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgcagcttgactggtggtcagaactgaa 547  Q
    |||||||  |||||||||||| |||||||||  |||||||||||||||||||| ||||||||||||||||||| ||   |||| |||||| ||| || ||    
T  5766935 cttaactcacacaccttataagctttgcgtggcttaagtcacgcaccactggcctgtgcgcgagttaactcacacaaggtgaccggtggttagagcttaa 5766836  T
Q  548 gaactcacgttttttgaaccgtgttcaaagcattttaattggttttgtatgtttttgttaaaaaatttcacgtgttttta-ctatatttatggtagatat 646  Q
     ||| ||| ||||||| ||  || ||||   | |||||||||||||| | ||||||    |    || ||||  |||||  |||| ||||||||||||||    
T  5766835 aaacacactttttttggactttggtcaagtgaatttaattggttttgcacgttttttactatgttttacacgattttttggctatgtttatggtagatat 5766736  T
Q  647 aacctatgttacaatctccccctataaatacacctctaaacttccccatttcctcacaccatctcacattctaactctcttcctcactc 735  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||||| | |||||||||||||||||| |||||| |||||||||    
T  5766735 aacctatgttacaatctccccctataaatacacctccaaactttcccattttcacacaccatctcacattctcactctcctcctcactc 5766647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 569 - 735
Target Start/End: Complemental strand, 45690599 - 45690432
Alignment:
Q  569 tgttcaaagcattttaattggttttgtatgtttttgttaaaaaatttcacgtgtttttactatatttatggtagatataacctatgttacaatctccccc 668  Q
    ||||||| |||||||||||| ||||  | |||||||||||    || ||||| |||| ||  ||||||||||||||||||||||||||||||||||||||    
T  45690599 tgttcaatgcattttaattgtttttacacgtttttgttaagtttttacacgttttttgaccctatttatggtagatataacctatgttacaatctccccc 45690500  T
Q  669 -tataaatacacctctaaacttccccatttcctcacaccatctcacattctaactctcttcctcactc 735  Q
     |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||    
T  45690499 ctataaatacacctctaaacttccccatttcctcacatcatctcacattctcactctcctcctcactc 45690432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 616 - 735
Target Start/End: Original strand, 27034189 - 27034308
Alignment:
Q  616 cacgtgtttttactatatttatggtagatataacctatgttacaatctccccctataaatacacctctaaacttccccatttcctcacaccatctcacat 715  Q
    ||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||    
T  27034189 cacgttttttgactctatttatggtagatataacctatgttacaatctccccctataaatacacctctaaacttctccatttcctcacaccatcttccat 27034288  T
Q  716 tctaactctcttcctcactc 735  Q
    ||  |||||| |||||||||    
T  27034289 tcccactctcctcctcactc 27034308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 631 - 735
Target Start/End: Original strand, 50066978 - 50067081
Alignment:
Q  631 tatttatggtagatataacctatgttacaatctccccctataaatacacctctaaacttccccatttcctcacaccatctcacattctaactctcttcct 730  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  50066978 tattaatggtagatataacctatgttacaatc-ccccctataaatacatctctaaacttccccatttcctcacaccatctcacattctcactctcctcct 50067076  T
Q  731 cactc 735  Q
    |||||    
T  50067077 cactc 50067081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 622 - 735
Target Start/End: Complemental strand, 5767540 - 5767428
Alignment:
Q  622 tttttactatatttatggtagatataacctatgttacaatctccccctataaatacacctctaaacttccccatttcctcacaccatctcacattctaac 721  Q
    |||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||| || |||||||||||||| |||||||||||||||||||| ||    
T  5767540 ttttgactatatttatggtagatataacctatgttacaatctcctc-tataaatacacttccaaacttccccattttctcacaccatctcacattctcac 5767442  T
Q  722 tctcttcctcactc 735  Q
    |||| |||| ||||    
T  5767441 tctcctcctgactc 5767428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 440 - 562
Target Start/End: Complemental strand, 3660297 - 3660175
Alignment:
Q  440 cagcgtgacttaactagcacaccttataatctttgcgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgcagcttgactggtggtca 539  Q
    |||||||||||||||||| |||||||||| || ||||||| ||||||||||||||| |||| | |||||||||||||||||||| |||| | ||||||||    
T  3660297 cagcgtgacttaactagcgcaccttataagctctgcgtgacttaagtcacgcaccattggcctatgcgcgagttaactcacgcaccttggccggtggtca 3660198  T
Q  540 gaactgaagaactcacgtttttt 562  Q
    || |||||||||  |||||||||    
T  3660197 gagctgaagaacaaacgtttttt 3660175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 442 - 563
Target Start/End: Original strand, 48566726 - 48566847
Alignment:
Q  442 gcgtgacttaactagcacaccttataatctttgcgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgcagcttgactggtggtcaga 541  Q
    ||||||||||||| ||| ||||||||| |||||||||| ||||||||||||  |||||| | ||||||||||||||||||||  ||| ||||||||||||    
T  48566726 gcgtgacttaacttgcagaccttataacctttgcgtgacttaagtcacgcattactggcctatgcgcgagttaactcacgcacgttggctggtggtcaga 48566825  T
Q  542 actgaagaactcacgttttttg 563  Q
    ||||||||||  ||||||||||    
T  48566826 actgaagaacaaacgttttttg 48566847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 640 - 735
Target Start/End: Original strand, 47486783 - 47486878
Alignment:
Q  640 tagatataacctatgttacaatctccccctataaatacacctctaaacttccccatttcctcacaccatctcacattctaactctcttcctcactc 735  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||| |||||||||| |||||| |||| ||||    
T  47486783 tagatataacctatgttacaatctccccctataaatacacctctaaacttctccattttctcactccaactcacattctcactctcctcctgactc 47486878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 426 - 563
Target Start/End: Original strand, 39222654 - 39222792
Alignment:
Q  426 gctagttaag-catgcagcgtgacttaactagcacaccttataatctttgcgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgcag 524  Q
    |||||||||| || ||||||||||||||||||| | ||||||||||| ||||||| ||||||||||||||| |||| | ||| ||||||||||||||||     
T  39222654 gctagttaagtcacgcagcgtgacttaactagcgcgccttataatctatgcgtgacttaagtcacgcaccaatggcctatgcacgagttaactcacgcac 39222753  T
Q  525 cttgactggtggtcagaactgaagaactcacgttttttg 563  Q
    | ||   |||||||||| |||||||||  ||||||||||    
T  39222754 catggtcggtggtcagagctgaagaacaaacgttttttg 39222792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 415 - 551
Target Start/End: Original strand, 46923718 - 46923855
Alignment:
Q  415 aatgcccctgtgctagttaag-catgcagcgtgacttaactagcacaccttataatctttgcgtgaattaagtcacgcaccactggcatgtgcgcgagtt 513  Q
    ||||||| || |||||||| | || ||| ||||||||||||||| ||||||||||||| ||||||| ||||||||||||||| |||| | ||||||||||    
T  46923718 aatgcccttgcgctagttacgtcacgcaacgtgacttaactagcgcaccttataatctatgcgtgacttaagtcacgcaccaatggcctatgcgcgagtt 46923817  T
Q  514 aactcacgcagcttgactggtggtcagaactgaagaac 551  Q
    |||||||||| | || | ||||||||||  ||||||||    
T  46923818 aactcacgcaccatgtccggtggtcagagatgaagaac 46923855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 622 - 734
Target Start/End: Complemental strand, 23602892 - 23602780
Alignment:
Q  622 tttttactatatttatggtagatataacctatgttacaatctccccctataaatacacctctaaacttccccatttcctcacaccatctcacattctaac 721  Q
    ||||||||| ||||||||||| ||||||||||||||| ||   | ||||||||||  |||||||||||||||||||||||||||||| ||| ||||| ||    
T  23602892 tttttactagatttatggtagttataacctatgttaccattctcacctataaatatccctctaaacttccccatttcctcacaccatttcatattctcac 23602793  T
Q  722 tctcttcctcact 734  Q
    |||| ||||||||    
T  23602792 tctcctcctcact 23602780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 439 - 551
Target Start/End: Original strand, 21482871 - 21482983
Alignment:
Q  439 gcagcgtgacttaactagcacaccttataatctttgcgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgcagcttgactggtggtc 538  Q
    ||||||||||||||||| |||||||||||| || ||||||| ||||||||||||||||| || | ||| ||||||||||||||||  ||| | | |||||    
T  21482871 gcagcgtgacttaactaacacaccttataagctctgcgtgacttaagtcacgcaccactagcctatgcacgagttaactcacgcacgttggccgatggtc 21482970  T
Q  539 agaactgaagaac 551  Q
    ||| |||||||||    
T  21482971 agagctgaagaac 21482983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 445 - 563
Target Start/End: Original strand, 41871704 - 41871822
Alignment:
Q  445 tgacttaactagcacaccttataatctttgcgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgcagcttgactggtggtcagaact 544  Q
    |||||||||| || |||||||||| || || |||| |||||| ||||||||||||| | ||||||||||||||||||||  ||| | |||||| ||||||    
T  41871704 tgacttaacttgcgcaccttataacctctgtgtgacttaagtaacgcaccactggcctatgcgcgagttaactcacgcacgttggccggtggtaagaact 41871803  T
Q  545 gaagaactcacgttttttg 563  Q
    |||||||  ||||||||||    
T  41871804 gaagaacaaacgttttttg 41871822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 442 - 523
Target Start/End: Complemental strand, 5770680 - 5770599
Alignment:
Q  442 gcgtgacttaactagcacaccttataatctttgcgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgca 523  Q
    |||||||||||||  | |||||||||| |||||||||  |||||||||||||||||||| |||||||||| |||||||||||    
T  5770680 gcgtgacttaactcacgcaccttataagctttgcgtggcttaagtcacgcaccactggcctgtgcgcgagctaactcacgca 5770599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 664 - 725
Target Start/End: Original strand, 6086477 - 6086538
Alignment:
Q  664 ccccctataaatacacctctaaacttccccatttcctcacaccatctcacattctaactctc 725  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||    
T  6086477 ccccctataaatacacctctaaacttcctcatttcctcacaacatctcacattctcactctc 6086538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 474 - 551
Target Start/End: Original strand, 49597193 - 49597270
Alignment:
Q  474 gcgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgcagcttgactggtggtcagaactgaagaac 551  Q
    |||||| |||||||||||||||||||| | ||||||||||||||||||||  |||   ||||||||||||| ||||||    
T  49597193 gcgtgacttaagtcacgcaccactggcctatgcgcgagttaactcacgcacgttggtcggtggtcagaactaaagaac 49597270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 504 - 563
Target Start/End: Original strand, 46178671 - 46178730
Alignment:
Q  504 tgcgcgagttaactcacgcagcttgactggtggtcagaactgaagaactcacgttttttg 563  Q
    ||||||||||||||||||||  ||||| ||||||||||||||||||||  ||||||||||    
T  46178671 tgcgcgagttaactcacgcatgttgaccggtggtcagaactgaagaacaaacgttttttg 46178730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 439 - 517
Target Start/End: Original strand, 10308439 - 10308517
Alignment:
Q  439 gcagcgtgacttaactagcacaccttataatctttgcgtgaattaagtcacgcaccactggcatgtgcgcgagttaact 517  Q
    |||||| |||||||||  | ||||| | || ||||| |||| ||||||||||||||||||||||||||| |||||||||    
T  10308439 gcagcgagacttaactcacgcacctcacaagctttgtgtgacttaagtcacgcaccactggcatgtgcgtgagttaact 10308517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 667 - 717
Target Start/End: Original strand, 3782094 - 3782144
Alignment:
Q  667 cctataaatacacctctaaacttccccatttcctcacaccatctcacattc 717  Q
    ||||||||||| |||| |||||||| ||||| |||||||||||||||||||    
T  3782094 cctataaatacccctccaaacttcctcattttctcacaccatctcacattc 3782144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 476 - 563
Target Start/End: Original strand, 9343499 - 9343586
Alignment:
Q  476 gtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgcagcttgactggtggtcagaactgaagaactcacgttttttg 563  Q
    |||| |||||||| |||| ||||||||| || ||||||||||||||||| || || |||| || || || |||| | |||||||||||    
T  9343499 gtgagttaagtcatgcactactggcatgggcacgagttaactcacgcaggttaaccggtgatccgagctcaagagcacacgttttttg 9343586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 439 - 517
Target Start/End: Complemental strand, 33686665 - 33686586
Alignment:
Q  439 gcagcgtgacttaactagcacaccttataatctttgcgtgaattaagtcacgcaccactg-gcatgtgcgcgagttaact 517  Q
    |||||| |||||||||  | ||||| | || |||||||||| |||||||||||||||||| || | ||||||||||||||    
T  33686665 gcagcgagacttaactcacgcacctcacaagctttgcgtgacttaagtcacgcaccactgagcctatgcgcgagttaact 33686586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 667 - 718
Target Start/End: Original strand, 49597385 - 49597436
Alignment:
Q  667 cctataaatacacctctaaacttccccatttcctcacaccatctcacattct 718  Q
    ||||||||||| |||| | ||||||| |||||||||||||||||||| ||||    
T  49597385 cctataaatacccctccatacttccctatttcctcacaccatctcactttct 49597436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 442 - 551
Target Start/End: Original strand, 20447135 - 20447244
Alignment:
Q  442 gcgtgacttaactagcacaccttataatctttgcgtgaattaagtcacgcaccactg-gcatgtgcgcgagttaactcacgcagcttgactggtggtcag 540  Q
    |||||||||||||  ||||| |||||  |||||||||| |||||| ||||||| ||| || |  ||||||||||||||||||   |||   |||||||||    
T  20447135 gcgtgacttaactcacacacgttatag-ctttgcgtgacttaagttacgcacccctgagccttcgcgcgagttaactcacgctagttggtcggtggtcag 20447233  T
Q  541 aactgaagaac 551  Q
    |||||||||||    
T  20447234 aactgaagaac 20447244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 442 - 551
Target Start/End: Original strand, 20532898 - 20533007
Alignment:
Q  442 gcgtgacttaactagcacaccttataatctttgcgtgaattaagtcacgcaccactg-gcatgtgcgcgagttaactcacgcagcttgactggtggtcag 540  Q
    |||||||||||||  ||||| |||||  |||||||||| |||||| ||||||| ||| || |  ||||||||||||||||||   |||   |||||||||    
T  20532898 gcgtgacttaactcacacacgttatag-ctttgcgtgacttaagttacgcacccctgagccttcgcgcgagttaactcacgctagttggtcggtggtcag 20532996  T
Q  541 aactgaagaac 551  Q
    |||||||||||    
T  20532997 aactgaagaac 20533007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 474 - 524
Target Start/End: Complemental strand, 23603043 - 23602993
Alignment:
Q  474 gcgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgcag 524  Q
    |||||| ||||||||||||| ||| || ||||||||||||||||| |||||    
T  23603043 gcgtgacttaagtcacgcacaactagcttgtgcgcgagttaactcgcgcag 23602993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 667 - 713
Target Start/End: Original strand, 41871926 - 41871972
Alignment:
Q  667 cctataaatacacctctaaacttccccatttcctcacaccatctcac 713  Q
    ||||||||||| |||| | ||||||| ||||||||||||||||||||    
T  41871926 cctataaatacccctccatacttccctatttcctcacaccatctcac 41871972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 102; Significance: 3e-50; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 569 - 718
Target Start/End: Complemental strand, 16710236 - 16710088
Alignment:
Q  569 tgttcaaagcattttaattggttttgtatgtttttgttaaaaaatttcacgtgtttttactatatttatggtagatataacctatgttacaatctccccc 668  Q
    ||||||| |||||||||||||||||| | |||||||||||    |||||||| |||| |||||||||||||||||||||||||| |||||||||||||||    
T  16710236 tgttcaatgcattttaattggttttgcacgtttttgttaagttttttcacgt-ttttgactatatttatggtagatataacctacgttacaatctccccc 16710138  T
Q  669 tataaatacacctctaaacttccccatttcctcacaccatctcacattct 718  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  16710137 tataaatacacctctaaactttcccatttcctcacaccatctcacattct 16710088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 569 - 735
Target Start/End: Complemental strand, 22494808 - 22494642
Alignment:
Q  569 tgttcaaagcattttaattggttttgtatgtttttgttaaaaaatttcacgtgtttttactatatttatggtagatataacctatgttacaatctccccc 668  Q
    ||||||| |||||||||||| ||||  | ||||||||||| |  |  ||||| |||| ||  ||||||||||||||||||||||||| ||||||||| ||    
T  22494808 tgttcaatgcattttaattgtttttacacgtttttgttaagatttaacacgttttttcaccctatttatggtagatataacctatgtcacaatctcctcc 22494709  T
Q  669 tataaatacacctctaaacttccccatttcctcacaccatctcacattctaactctcttcctcactc 735  Q
    ||||||||||||||||||||| | ||||||||||||||| |||||||||| |||||| |||||||||    
T  22494708 tataaatacacctctaaactttcacatttcctcacaccaactcacattctcactctcctcctcactc 22494642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 442 - 563
Target Start/End: Original strand, 29908471 - 29908592
Alignment:
Q  442 gcgtgacttaactagcacaccttataatctttgcgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgcagcttgactggtggtcaga 541  Q
    ||||||||||||| || |||||||||| || ||||||| ||||||||||| |||||||| | |||||||||||||||| |||  ||| | |||||| |||    
T  29908471 gcgtgacttaacttgcgcaccttataacctctgcgtgacttaagtcacgcgccactggcctatgcgcgagttaactcatgcacgttggccggtggttaga 29908570  T
Q  542 actgaagaactcacgttttttg 563  Q
    ||||||||||  ||||||||||    
T  29908571 actgaagaacaaacgttttttg 29908592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 428 - 551
Target Start/End: Original strand, 12874196 - 12874320
Alignment:
Q  428 tagttaag-catgcagcgtgacttaactagcacaccttataatctttgcgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgcagct 526  Q
    |||||||| |||||| ||||||||||| ||| | ||||||||||| | ||||| |||||||||||||||||| | | |||||||||||||||||||| ||    
T  12874196 tagttaagtcatgcaacgtgacttaaccagcgcgccttataatctctacgtgacttaagtcacgcaccactgacctatgcgcgagttaactcacgcaact 12874295  T
Q  527 tgactggtggtcagaactgaagaac 551  Q
    |||  |||||| ||| |||||||||    
T  12874296 tgagcggtggtaagagctgaagaac 12874320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 416 - 563
Target Start/End: Complemental strand, 29132780 - 29132632
Alignment:
Q  416 atgcccctgtgctagttaag-catgcagcgtgacttaactagcacaccttataatctttgcgtgaattaagtcacgcaccactggcatgtgcgcgagtta 514  Q
    ||||||||| | |||||||| || ||| ||||||||||||| | ||||||||||  | | ||||| |||||||||||||||| ||| | |||||||||||    
T  29132780 atgcccctgcgttagttaagtcacgcaacgtgacttaactaacgcaccttataagttctacgtgacttaagtcacgcaccaccggcctatgcgcgagtta 29132681  T
Q  515 actcacgcagcttgactggtggtcagaactgaagaactcacgttttttg 563  Q
    |||||||||  ||| | |||||||||| |||||||||  ||||||||||    
T  29132680 actcacgcacgttggccggtggtcagagctgaagaacaaacgttttttg 29132632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 384 - 520
Target Start/End: Complemental strand, 16710381 - 16710243
Alignment:
Q  384 acttttctctcgcacccagctgaaaa-acattaatgcccctgtgctagttaag-catgcagcgtgacttaactagcacaccttataatctttgcgtgaat 481  Q
    ||||||| ||||||||||  |||||| ||| ||||| || |||| |||||||| || ||||| ||||||||||| | || ||||||   | ||||||| |    
T  16710381 acttttcgctcgcacccaattgaaaagacaataatgtccatgtgttagttaagtcacgcagcatgacttaactaacgcatcttatatgttctgcgtgagt 16710282  T
Q  482 taagtcacgcaccactggcatgtgcgcgagttaactcac 520  Q
    ||||||||||||||||| ||||||| |||||||||||||    
T  16710281 taagtcacgcaccactgacatgtgcacgagttaactcac 16710243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 442 - 551
Target Start/End: Complemental strand, 6903833 - 6903725
Alignment:
Q  442 gcgtgacttaactagcacaccttataatctttgcgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgcagcttgactggtggtcaga 541  Q
    |||||||||||||    |||| |||||||| ||||||  ||||||||||||||||||||  |||||||||||||||||| ||  ||| | ||||||||||    
T  6903833 gcgtgacttaactcatgcaccatataatctatgcgtggcttaagtcacgcaccactggccggtgcgcgagttaactcacaca-tttggccggtggtcaga 6903735  T
Q  542 actgaagaac 551  Q
    ||||||||||    
T  6903734 actgaagaac 6903725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 472 - 541
Target Start/End: Original strand, 28266005 - 28266074
Alignment:
Q  472 ttgcgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgcagcttgactggtggtcaga 541  Q
    |||||||| ||| |||||||||||||| ||||||||||||||||||||||||  ||||  ||||||||||    
T  28266005 ttgcgtgagttaggtcacgcaccactgacatgtgcgcgagttaactcacgcacgttgatcggtggtcaga 28266074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 426 - 551
Target Start/End: Original strand, 8556189 - 8556315
Alignment:
Q  426 gctagttaag-catgcagcgtgacttaactagcacaccttataatctttgcgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgcag 524  Q
    |||||||||| || ||| |||||||||||| || ||||||||||||| || |||| |||||||||||| || || | | ||| |||||| |||||| ||     
T  8556189 gctagttaagtcacgcaacgtgacttaactggcgcaccttataatctatgtgtgacttaagtcacgcatcaatgccctatgcacgagtttactcacacac 8556288  T
Q  525 cttgactggtggtcagaactgaagaac 551  Q
    | || | |||||||||| |||||||||    
T  8556289 catggccggtggtcagagctgaagaac 8556315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 667 - 713
Target Start/End: Complemental strand, 20149490 - 20149444
Alignment:
Q  667 cctataaatacacctctaaacttccccatttcctcacaccatctcac 713  Q
    ||||||||||| |||| ||||||||||||||||||||||| ||||||    
T  20149490 cctataaatacccctccaaacttccccatttcctcacaccttctcac 20149444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 504 - 586
Target Start/End: Complemental strand, 20149651 - 20149569
Alignment:
Q  504 tgcgcgagttaactcacgcagcttgactggtggtcagaactgaagaactcacgttttttgaaccgtgttcaaagcattttaat 586  Q
    ||||||||||||||||||||  ||| |   |||||| |||||||||||  ||||||||||||| ||| |||| ||||||||||    
T  20149651 tgcgcgagttaactcacgcacgttggccaatggtcataactgaagaacaaacgttttttgaacggtggtcaatgcattttaat 20149569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 667 - 718
Target Start/End: Complemental strand, 25685946 - 25685895
Alignment:
Q  667 cctataaatacacctctaaacttccccatttcctcacaccatctcacattct 718  Q
    ||||||||||| |||| | ||||||| |||||||||||||||||||| ||||    
T  25685946 cctataaatacccctccatacttccctatttcctcacaccatctcactttct 25685895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 94; Significance: 2e-45; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 598 - 735
Target Start/End: Original strand, 43636462 - 43636599
Alignment:
Q  598 gtttttgttaaaaaatttcacgtgtttttactatatttatggtagatataacctatgttacaatctccccctataaatacacctctaaacttccccattt 697  Q
    ||||||||||||   || ||||| |||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  43636462 gtttttgttaaatttttacacgttttttgaccctatttatggtagatataacctatgttacaatctccccctataaatacacctctaaacttcccctttt 43636561  T
Q  698 cctcacaccatctcacattctaactctcttcctcactc 735  Q
    ||||||||||||||||||||| |||||| |||||||||    
T  43636562 cctcacaccatctcacattctcactctcctcctcactc 43636599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 622 - 734
Target Start/End: Original strand, 1931498 - 1931610
Alignment:
Q  622 tttttactatatttatggtagatataacctatgttacaatctccccctataaatacacctctaaacttccccatttcctcacaccatctcacattctaac 721  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||| |||||| ||||  | ||||| ||    
T  1931498 tttttactatatttacggtagatataacctatgttacaatctccccctataaatatacctccaaacttccacattttctcacatcatcaaaaattctcac 1931597  T
Q  722 tctcttcctcact 734  Q
    || | ||||||||    
T  1931598 tcccctcctcact 1931610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 653 - 730
Target Start/End: Original strand, 33775408 - 33775485
Alignment:
Q  653 tgttacaatctccccctataaatacacctctaaacttccccatttcctcacaccatctcacattctaactctcttcct 730  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||| ||||    
T  33775408 tgttacaatctccccctataaatacacctctaaacttcctcatttcctcacaccaactcacattctcactctcctcct 33775485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 439 - 563
Target Start/End: Complemental strand, 43693686 - 43693562
Alignment:
Q  439 gcagcgtgacttaactagcacaccttataatctttgcgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgcagcttgactggtggtc 538  Q
    ||||||||||||||||||| ||||||||||||| || |||| |||| |||||||||| |||| | ||||||||| |||||||||| | || | |||||||    
T  43693686 gcagcgtgacttaactagcgcaccttataatctatgtgtgacttaattcacgcaccaatggcttatgcgcgagtaaactcacgcaccatggccggtggtc 43693587  T
Q  539 agaactgaagaactcacgttttttg 563  Q
    ||| |||||||||  ||||||||||    
T  43693586 agagctgaagaacaaacgttttttg 43693562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 442 - 563
Target Start/End: Complemental strand, 34471710 - 34471590
Alignment:
Q  442 gcgtgacttaactagcacaccttataatctttgcgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgcagcttgactggtggtcaga 541  Q
    ||||||||||||| || |||||||||| || ||||||| ||||||||||||||| |||| | ||||||||||||||||||||  ||| | |||||| |||    
T  34471710 gcgtgacttaacttgcgcaccttataaactatgcgtgacttaagtcacgcaccattggc-tatgcgcgagttaactcacgcacgttggccggtggttaga 34471612  T
Q  542 actgaagaactcacgttttttg 563  Q
    ||||||||||  ||||||||||    
T  34471611 actgaagaacaaacgttttttg 34471590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 442 - 551
Target Start/End: Complemental strand, 23542861 - 23542752
Alignment:
Q  442 gcgtgacttaactagcacaccttataatctttgcgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgcagcttgactggtggtcaga 541  Q
    ||||||||||| || |||||| ||||| || ||||||| |||| ||||||||||||||| | |||||||||||||||| |||  |||   ||||||||||    
T  23542861 gcgtgacttaaataacacaccgtataagctctgcgtgacttaattcacgcaccactggcctatgcgcgagttaactcatgcacgttggtcggtggtcaga 23542762  T
Q  542 actgaagaac 551  Q
    ||||||||||    
T  23542761 actgaagaac 23542752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 667 - 718
Target Start/End: Original strand, 3964187 - 3964238
Alignment:
Q  667 cctataaatacacctctaaacttccccatttcctcacaccatctcacattct 718  Q
    ||||||||||| |||| |||||||| ||||||||||||||||||||||||||    
T  3964187 cctataaatacccctccaaacttcctcatttcctcacaccatctcacattct 3964238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 622 - 735
Target Start/End: Complemental strand, 43835262 - 43835149
Alignment:
Q  622 tttttactatatttatggtagatataacctatgttacaatctccccctataaatacacctctaaacttccccatttcctcacaccatctcacattctaac 721  Q
    ||||||||| |||||| |||| || ||| |||||||| ||   | |||||||||||   |  ||||||||||||||| ||||||||||| ||||||| ||    
T  43835262 tttttactacatttattgtagttaaaacatatgttaccattctcacctataaatacctttgcaaacttccccatttcttcacaccatctaacattctcac 43835163  T
Q  722 tctcttcctcactc 735  Q
    |||| |||||||||    
T  43835162 tctcctcctcactc 43835149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 473 - 563
Target Start/End: Original strand, 3964009 - 3964098
Alignment:
Q  473 tgcgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgcagcttgactggtggtcagaactgaagaactcacgttttttg 563  Q
    |||||||||||||||||||| ||||| | ||| ||||||||||||||||||  ||| | |||||| ||| || |||||| || ||||||||    
T  3964009 tgcgtgaattaagtcacgcatcactgtc-tgtccgcgagttaactcacgcaagttggccggtggttagagctcaagaacacatgttttttg 3964098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1700 (Bit Score: 92; Significance: 3e-44; HSPs: 1)
Name: scaffold1700
Description:

Target: scaffold1700; HSP #1
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 616 - 735
Target Start/End: Complemental strand, 1071 - 952
Alignment:
Q  616 cacgtgtttttactatatttatggtagatataacctatgttacaatctccccctataaatacacctctaaacttccccatttcctcacaccatctcacat 715  Q
    ||||| |||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  1071 cacgtttttttaccctatttatggtagatataacctatgttacaatctctccctataaatacacctctaaacttccccatttcctcacaacatctcacat 972  T
Q  716 tctaactctcttcctcactc 735  Q
    ||| |||||| |||||||||    
T  971 tctcactctcctcctcactc 952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 89; Significance: 2e-42; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 569 - 725
Target Start/End: Original strand, 35054679 - 35054835
Alignment:
Q  569 tgttcaaagcattttaattggttttgtatgtttttgttaaaaaatttcacgtgtttttactatatttatggtagatataacctatgttacaatctccccc 668  Q
    ||||||| ||||||| |||| ||||  | ||||||||||| |  |  ||||| |||||||  |||||||||||||||||||||||||||||||||| |||    
T  35054679 tgttcaatgcatttttattgtttttacacgtttttgttaagatttaacacgtttttttaccttatttatggtagatataacctatgttacaatctctccc 35054778  T
Q  669 tataaatacacctctaaacttccccatttcctcacaccatctcacattctaactctc 725  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  35054779 tataaatacacctctaaacttccccatttcctcacaccaactcacattctcactctc 35054835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 616 - 691
Target Start/End: Original strand, 9400164 - 9400239
Alignment:
Q  616 cacgtgtttttactatatttatggtagatataacctatgttacaatctccccctataaatacacctctaaacttcc 691  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  9400164 cacgtttttttagtatatttatggtagatataacctatgttacaatctccccctataaatactcctccaaacttcc 9400239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 444 - 585
Target Start/End: Complemental strand, 23912366 - 23912225
Alignment:
Q  444 gtgacttaactagcacaccttataatctttgcgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgcagcttgactggtggtcagaac 543  Q
    |||||||||||  | |||||||||| || ||||||| |||||||| |||||||||||||||||||||||||| |||||||  ||| | |||||| ||| |    
T  23912366 gtgacttaactcacgcaccttataagctctgcgtgacttaagtcatgcaccactggcatgtgcgcgagttaattcacgcaagttggccggtggttagagc 23912267  T
Q  544 tgaagaactcacgttttttgaaccgtgttcaaagcattttaa 585  Q
    | |||||  ||||||||||| || ||| |||| |||||||||    
T  23912266 tcaagaatacacgttttttggacggtggtcaatgcattttaa 23912225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 449 - 563
Target Start/End: Original strand, 319200 - 319314
Alignment:
Q  449 ttaactagcacaccttataatctttgcgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgcagcttgactggtggtcagaactgaag 548  Q
    |||||| || |||||||||| || || |||| |||||||| ||||||||||  | ||||||||||||||||||||  |||  ||||||||||||||||||    
T  319200 ttaacttgcgcaccttataacctctgtgtgacttaagtcatgcaccactggtctatgcgcgagttaactcacgcacgttgggtggtggtcagaactgaag 319299  T
Q  549 aactcacgttttttg 563  Q
    |||  ||||||||||    
T  319300 aacaaacgttttttg 319314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 442 - 551
Target Start/End: Original strand, 13312555 - 13312664
Alignment:
Q  442 gcgtgacttaactagcacaccttataatctttgcgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgcagcttgactggtggtcaga 541  Q
    |||||||||||||| | |||||||||| || ||||||| |||||||||| ||||||||| || || |||||||||||||| |  ||| | | ||||||||    
T  13312555 gcgtgacttaactaacgcaccttataagctctgcgtgacttaagtcacgaaccactggcctgggcacgagttaactcacgtacgttggccgatggtcaga 13312654  T
Q  542 actgaagaac 551  Q
    ||||||||||    
T  13312655 actgaagaac 13312664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 481 - 523
Target Start/End: Original strand, 17399041 - 17399083
Alignment:
Q  481 ttaagtcacgcaccactggcatgtgcgcgagttaactcacgca 523  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  17399041 ttaagtcacgcaccactggcatgtgtgcgagttaactcacgca 17399083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 463 - 524
Target Start/End: Original strand, 9521402 - 9521463
Alignment:
Q  463 ttataatctttgcgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgcag 524  Q
    |||||| || ||||||| |||||||||||||||||||||||| ||||| ||||||| |||||    
T  9521402 ttataagctctgcgtgacttaagtcacgcaccactggcatgttcgcgacttaactcccgcag 9521463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 667 - 718
Target Start/End: Complemental strand, 23912133 - 23912082
Alignment:
Q  667 cctataaatacacctctaaacttccccatttcctcacaccatctcacattct 718  Q
    ||||||||||| |||| ||||||| | |||||||||||||||||||||||||    
T  23912133 cctataaatacccctccaaacttctcaatttcctcacaccatctcacattct 23912082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 86; Significance: 1e-40; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 546 - 735
Target Start/End: Complemental strand, 3460304 - 3460115
Alignment:
Q  546 aagaactcacgttttttgaaccgtgttcaaagcattttaattggttttgtatgtttttgttaaaaaatttcacgtgtttttactatatttatggtagata 645  Q
    |||||| ||||||||||  ||  ||||||| |||||||||||| ||||  | ||||||||||| |  |  ||||| |||| ||  ||||||||||| |||    
T  3460304 aagaacacacgtttttttgactttgttcaatgcattttaattgtttttacacgtttttgttaagatttaacacgttttttgaccctatttatggtaaata 3460205  T
Q  646 taacctatgttacaatctccccctataaatacacctctaaacttccccatttcctcacaccatctcacattctaactctcttcctcactc 735  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||| |||||    
T  3460204 taacatatgttacaatctcccgctataaatacacctctaaacttccccatttcctcacaccaactcacattctcactctcctccccactc 3460115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 633 - 735
Target Start/End: Complemental strand, 4845587 - 4845485
Alignment:
Q  633 tttatggtagatataacctatgttacaatctccccctataaatacacctctaaacttccccatttcctcacaccatctcacattctaactctcttcctca 732  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||| |||||| ||||||    
T  4845587 tttatggtagatataacctacgttacaatctccccctataaatacacctctaaactttcccatttcctcgcaccaactcacattctcactctcctcctca 4845488  T
Q  733 ctc 735  Q
    |||    
T  4845487 ctc 4845485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 631 - 735
Target Start/End: Complemental strand, 40014270 - 40014167
Alignment:
Q  631 tatttatggtagatataacctatgttacaatctccccctataaatacacctctaaacttccccatttcctcacaccatctcacattctaactctcttcct 730  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||| ||| ||||||||||||| |||||||||| |||||| ||||    
T  40014270 tatttatggtagatataacatatgttacaatc-ccctctataaatacacctctaaactttcccgtttcctcacaccaactcacattctcactctcctcct 40014172  T
Q  731 cactc 735  Q
    |||||    
T  40014171 cactc 40014167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 426 - 563
Target Start/End: Original strand, 6427235 - 6427373
Alignment:
Q  426 gctagttaag-catgcagcgtgacttaactagcacaccttataatctttgcgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgcag 524  Q
    |||||||||| | |||||||||||||||||||| |||||||||| || ||||||| ||||||||||||| |||||| | ||||||||||||||||||||     
T  6427235 gctagttaagtcttgcagcgtgacttaactagcgcaccttataaactatgcgtgacttaagtcacgcacaactggcctatgcgcgagttaactcacgcac 6427334  T
Q  525 cttgactggtggtcagaactgaagaactcacgttttttg 563  Q
    |||| | |||| | ||| |||||||||  ||||||||||    
T  6427335 cttggccggtgattagagctgaagaacaaacgttttttg 6427373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 475 - 702
Target Start/End: Original strand, 2599801 - 2600028
Alignment:
Q  475 cgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgcagcttgactggtggtcagaactgaagaactcacgttttttgaaccgtgttca 574  Q
    ||||| |||||||||||||||||  |  ||||||| |||||||||||||| ||    ||||||| ||||| |||||| ||||||||||| |  |||||||    
T  2599801 cgtgacttaagtcacgcaccactaaccggtgcgcgtgttaactcacgcaggtttgtcggtggtctgaactcaagaacacacgttttttggattgtgttca 2599900  T
Q  575 aagcattttaattggttttgtatgtttttgttaaaaaattt--cacgtgtttttactatatttatggtagatataacctatgttacaatctccccctata 672  Q
    |   |||||||||||||||| |  ||||| |||  |  |||  ||||| |||| ||||||||| |||||||||| || |||||||||||| |||||||||    
T  2599901 agtaattttaattggttttgcacattttt-ttactatgttttacacgttttttgactatatttgtggtagatattacatatgttacaatc-ccccctata 2599998  T
Q  673 aatacacctctaaacttccccatttcctca 702  Q
    |||||||||| |||||||  ||||||||||    
T  2599999 aatacacctccaaacttcaacatttcctca 2600028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 427 - 548
Target Start/End: Complemental strand, 7084106 - 7083984
Alignment:
Q  427 ctagttaag-catgcagcgtgacttaactagcacaccttataatctttgcgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgcagc 525  Q
    ||||||||| || ||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||| | |||| | |||||||||||||||| ||| |    
T  7084106 ctagttaagtcacgcagcgtgacttaactagcgcaccttataatctatgcgtgacttaagtcacgcactaatggcctatgcgcgagttaactcatgcacc 7084007  T
Q  526 ttgactggtggtcagaactgaag 548  Q
    ||| | |||||||||| ||||||    
T  7084006 ttggccggtggtcagagctgaag 7083984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 616 - 734
Target Start/End: Complemental strand, 9883851 - 9883733
Alignment:
Q  616 cacgtgtttttactatatttatggtagatataacctatgttacaatctccccctataaatacacctctaaacttccccatttcctcacaccatctcacat 715  Q
    ||||| |||| |||| ||||||||||  ||||||||||||||| ||     ||||||||||| |||| |||||||||||||| |||||||||||||||||    
T  9883851 cacgttttttgactacatttatggtacttataacctatgttaccattcatacctataaatacccctccaaacttccccattttctcacaccatctcacat 9883752  T
Q  716 tctaactctcttcctcact 734  Q
    ||| |||||| ||||||||    
T  9883751 tctcactctcctcctcact 9883733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 442 - 563
Target Start/End: Complemental strand, 28784888 - 28784767
Alignment:
Q  442 gcgtgacttaactagcacaccttataatctttgcgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgcagcttgactggtggtcaga 541  Q
    |||||||||||| | ||||||||||||| | ||||||| ||||||||| | |||||||| || | |||||||||||||||||  |||   ||||||||||    
T  28784888 gcgtgacttaacaaacacaccttataatttatgcgtgacttaagtcacaccccactggcctgggtgcgagttaactcacgcacgttggtcggtggtcaga 28784789  T
Q  542 actgaagaactcacgttttttg 563  Q
    ||||||||||  ||||||||||    
T  28784788 actgaagaacaaacgttttttg 28784767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 439 - 563
Target Start/End: Complemental strand, 1173057 - 1172933
Alignment:
Q  439 gcagcgtgacttaactagcacaccttataatctttgcgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgcagcttgactggtggtc 538  Q
    ||||||||||||||| ||| |||||||||| || ||||||| |||||| ||||||||||||| | ||||| |||||||||||||| ||||   | ||||     
T  1173057 gcagcgtgacttaacaagcgcaccttataacctctgcgtgacttaagttacgcaccactggcctatgcgccagttaactcacgcaccttggtcgatggtt 1172958  T
Q  539 agaactgaagaactcacgttttttg 563  Q
    ||| |||||||||  ||||||||||    
T  1172957 agagctgaagaacaaacgttttttg 1172933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 470 - 563
Target Start/End: Original strand, 10532789 - 10532882
Alignment:
Q  470 ctttgcgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgcagcttgactggtggtcagaactgaagaactcacgttttttg 563  Q
    ||||| |||| |||||||| ||||||||||| ||||||||||||||||||||||  ||| | |||||||||| |||||||||  ||||||||||    
T  10532789 ctttgtgtgagttaagtcatgcaccactggcttgtgcgcgagttaactcacgcaagttggccggtggtcagagctgaagaacaaacgttttttg 10532882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 671 - 735
Target Start/End: Complemental strand, 19401788 - 19401724
Alignment:
Q  671 taaatacacctctaaacttccccatttcctcacaccatctcacattctaactctcttcctcactc 735  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||| |||||| |||||||||    
T  19401788 taaatacacctctaaaattctccatttcctcacaccatctcacattctcactctcctcctcactc 19401724  T

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Target: chr5; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 443 - 563
Target Start/End: Complemental strand, 41758829 - 41758709
Alignment:
Q  443 cgtgacttaactagcacaccttataatctttgcgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgcagcttgactggtggtcagaa 542  Q
    |||||||||||| || ||  |||||| || ||||||| || |||||||||||| || | | |||||||||||||||| |||  ||| |||||||||||||    
T  41758829 cgtgacttaacttgcgcattttataacctctgcgtgacttgagtcacgcaccattgacctatgcgcgagttaactcatgcacgttggctggtggtcagaa 41758730  T
Q  543 ctgaagaactcacgttttttg 563  Q
    |||||||||  ||||||||||    
T  41758729 ctgaagaacaaacgttttttg 41758709  T

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Target: chr5; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 667 - 725
Target Start/End: Complemental strand, 10399170 - 10399112
Alignment:
Q  667 cctataaatacacctctaaacttccccatttcctcacaccatctcacattctaactctc 725  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||    
T  10399170 cctataaatacccctccaaacttccccatttcctcacaccatctcacattctcactctc 10399112  T

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Target: chr5; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 622 - 718
Target Start/End: Original strand, 19044036 - 19044132
Alignment:
Q  622 tttttactatatttatggtagatataacctatgttacaatctccccctataaatacacctctaaacttccccatttcctcacaccatctcacattct 718  Q
    ||||||| | |||||| |||  ||||||||||||||  ||  || ||||||||||| |||| |||||||||||||| ||||||||||||||||||||    
T  19044036 tttttacaacatttattgtatttataacctatgttatcattcccacctataaatacccctccaaacttccccattttctcacaccatctcacattct 19044132  T

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Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 443 - 522
Target Start/End: Complemental strand, 11125901 - 11125823
Alignment:
Q  443 cgtgacttaactagcacaccttataatctttgcgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgc 522  Q
    ||||||||||||  | |||||||||  || ||||||| |||||||| ||| |||||||||||||||||||||||||||||    
T  11125901 cgtgacttaactcacgcaccttatag-ctctgcgtgacttaagtcatgcatcactggcatgtgcgcgagttaactcacgc 11125823  T

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Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 473 - 523
Target Start/End: Original strand, 16100880 - 16100930
Alignment:
Q  473 tgcgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgca 523  Q
    ||||||| ||||||||||||||| | || ||||||||||||||||||||||    
T  16100880 tgcgtgacttaagtcacgcaccatttgcctgtgcgcgagttaactcacgca 16100930  T

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Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 667 - 718
Target Start/End: Complemental strand, 41758605 - 41758554
Alignment:
Q  667 cctataaatacacctctaaacttccccatttcctcacaccatctcacattct 718  Q
    ||||||||||| |||| | ||||||| |||||||||||||||||||| ||||    
T  41758605 cctataaatacccctccatacttccctatttcctcacaccatctcactttct 41758554  T

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Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 439 - 548
Target Start/End: Complemental strand, 1082009 - 1081899
Alignment:
Q  439 gcagcgtgacttaactagcacaccttataatctttgcgtgaattaagtcacgcaccactg-gcatgtgcgcgagttaactcacgcagcttgactggtggt 537  Q
    |||||| |||||||||  | ||||| | || || ||||||| |||||||||||||||||| || | ||||||||||||||  ||||  ||||| ||||||    
T  1082009 gcagcgagacttaactcacgcacctcacaagctctgcgtgacttaagtcacgcaccactgagcctatgcgcgagttaacttgcgcaagttgaccggtggt 1081910  T
Q  538 cagaactgaag 548  Q
     | ||||||||    
T  1081909 aaaaactgaag 1081899  T

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Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 473 - 563
Target Start/End: Complemental strand, 20202696 - 20202606
Alignment:
Q  473 tgcgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgcagcttgactggtggtcagaactgaagaactcacgttttttg 563  Q
    ||||||| || |||||| |||||||||| || |||||||||||||| ||||| ||| |  |||||| || || |||||| ||| |||||||    
T  20202696 tgcgtgacttgagtcacacaccactggcctgggcgcgagttaactcgcgcaggttggccagtggtctgagctcaagaacacacattttttg 20202606  T

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Target: scaffold0861 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0861
Description:

Target: scaffold0861; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 428 - 563
Target Start/End: Complemental strand, 3858 - 3722
Alignment:
Q  428 tagttaag-catgcagcgtgacttaactagcacaccttataatctttgcgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgcagct 526  Q
    |||||||| |||||| ||||||||| ||| |||||||||||| |||||  ||| ||||||||| |||||||||| | |||||||||||||||||||| ||    
T  3858 tagttaagtcatgcaacgtgacttagctaacacaccttataagctttgtctgacttaagtcacacaccactggcctatgcgcgagttaactcacgcacct 3759  T
Q  527 tgactggtggtcagaactgaagaactcacgttttttg 563  Q
    || | |||||||| | || ||||||  ||||||||||    
T  3758 tggccggtggtcaaagctaaagaacaaacgttttttg 3722  T

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Target: scaffold0753 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0753
Description:

Target: scaffold0753; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 457 - 562
Target Start/End: Original strand, 3982 - 4088
Alignment:
Q  457 cacaccttataatctttgcgtgaattaagtcacgcaccactg-gcatgtgcgcgagttaactcacgcagcttgactggtggtcagaactgaagaactcac 555  Q
    |||| |||||||||| ||||||| |||||||||||||||||| || | | ||||||||||||||||||  ||||| ||||||||||||||||||||  ||    
T  3982 cacatcttataatctctgcgtgacttaagtcacgcaccactgagcctttccgcgagttaactcacgcaagttgaccggtggtcagaactgaagaacaaac 4081  T
Q  556 gtttttt 562  Q
    |||||||    
T  4082 gtttttt 4088  T

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Target: scaffold0217 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 457 - 562
Target Start/End: Original strand, 25582 - 25688
Alignment:
Q  457 cacaccttataatctttgcgtgaattaagtcacgcaccactg-gcatgtgcgcgagttaactcacgcagcttgactggtggtcagaactgaagaactcac 555  Q
    ||||||||||||||| ||||||| ||||| |||| |||||   || | ||||||||||||||||||||  ||| | ||||||||||||||||||||  ||    
T  25582 cacaccttataatctatgcgtgacttaaggcacgtaccacccagcctttgcgcgagttaactcacgcaagttggccggtggtcagaactgaagaacaaac 25681  T
Q  556 gtttttt 562  Q
    |||||||    
T  25682 gtttttt 25688  T

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Target: scaffold0223 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 2)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 634 - 718
Target Start/End: Complemental strand, 16006 - 15922
Alignment:
Q  634 ttatggtagatataacctatgttacaatctccccctataaatacacctctaaacttccccatttcctcacaccatctcacattct 718  Q
    ||||||||| ||||||||||  ||| ||  || ||||||||||| |||  |||||||| ||||||||||||||||||||||||||    
T  16006 ttatggtagttataacctatactaccattcccacctataaataccccttcaaacttcctcatttcctcacaccatctcacattct 15922  T

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Target: scaffold0223; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 475 - 563
Target Start/End: Complemental strand, 16168 - 16079
Alignment:
Q  475 cgtgaattaagtcacgcaccactggcatgtgcgcgagttaactcacgcagcttgactgg-tggtcagaactgaagaactcacgttttttg 563  Q
    ||||| ||||||||||| ||| |||| |||||||| |||||||||||||| ||| | || |||||||| || || ||| |||||||||||    
T  16168 cgtgacttaagtcacgctccagtggcctgtgcgcgtgttaactcacgcaggttggccggttggtcagagctcaaaaacacacgttttttg 16079  T

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