View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19380_high_27 (Length: 450)
Name: NF19380_high_27
Description: NF19380
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19380_high_27 |
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Alignment Details
Target: chr4 (Bit Score: 137; Significance: 2e-71; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 15 - 196
Target Start/End: Original strand, 17027618 - 17027795
Alignment:
| Q |
15 |
tatataagggctttcccactacctatgacaatgtacgtatggtatcgaactacatgcataaacacaaagcttattgtagttgtcaatctccttcggagat |
114 |
Q |
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| T |
17027618 |
tatataagggctttcccgctacctacgacagtgta----tggtatcgaactacatgcataaacacaaagcttattgtagttgtcaatctccttcggagat |
17027713 |
T |
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| Q |
115 |
aatcgctcatacgcgaatacaaactccatcagttggtgaccaaagatgtatttacaccaataaaggggaaattaagggacct |
196 |
Q |
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| T |
17027714 |
aatcgctcatacgcgaatacaaactccatcatttggtgaccaaagatgtattcacaccaaaaaaggggaaattaaggaacct |
17027795 |
T |
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