View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19380_high_47 (Length: 373)

Name: NF19380_high_47
Description: NF19380
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19380_high_47
NF19380_high_47
[»] chr5 (48 HSPs)
chr5 (87-241)||(15992169-15992321)
chr5 (13-89)||(15992020-15992096)
chr5 (105-177)||(39131451-39131524)
chr5 (308-355)||(1429010-1429057)
chr5 (308-355)||(5830172-5830219)
chr5 (308-355)||(15992388-15992435)
chr5 (308-355)||(22019903-22019950)
chr5 (308-355)||(22973930-22973977)
chr5 (308-355)||(24886367-24886414)
chr5 (308-355)||(27330584-27330631)
chr5 (308-355)||(35826334-35826381)
chr5 (308-355)||(38528085-38528132)
chr5 (308-355)||(39573091-39573138)
chr5 (308-354)||(31705460-31705506)
chr5 (15-89)||(39131697-39131771)
chr5 (310-355)||(699430-699475)
chr5 (311-355)||(12910635-12910679)
chr5 (308-352)||(13956210-13956254)
chr5 (308-355)||(2888293-2888340)
chr5 (308-355)||(8437245-8437292)
chr5 (308-355)||(8467006-8467053)
chr5 (308-355)||(21088614-21088661)
chr5 (308-355)||(22255462-22255509)
chr5 (308-355)||(25889650-25889697)
chr5 (308-355)||(43308508-43308555)
chr5 (308-354)||(9200505-9200551)
chr5 (308-354)||(17157879-17157925)
chr5 (308-354)||(28416399-28416445)
chr5 (308-353)||(5837837-5837882)
chr5 (308-353)||(19120141-19120186)
chr5 (310-355)||(35504645-35504690)
chr5 (312-355)||(7693501-7693544)
chr5 (308-355)||(14409189-14409236)
chr5 (308-355)||(15724768-15724815)
chr5 (308-355)||(22981073-22981120)
chr5 (308-355)||(25669856-25669903)
chr5 (312-355)||(31786498-31786541)
chr5 (308-355)||(33908513-33908559)
chr5 (308-355)||(35511330-35511377)
chr5 (308-355)||(35934176-35934223)
chr5 (308-355)||(36860704-36860751)
chr5 (308-355)||(40133665-40133712)
chr5 (308-355)||(42343001-42343048)
chr5 (308-355)||(7208712-7208759)
chr5 (308-355)||(8741733-8741780)
chr5 (308-355)||(25500774-25500821)
chr5 (308-355)||(36867042-36867089)
chr5 (308-336)||(43254154-43254182)
[»] chr8 (36 HSPs)
chr8 (105-205)||(26057638-26057738)
chr8 (308-355)||(1149496-1149543)
chr8 (308-355)||(4132550-4132597)
chr8 (308-355)||(6098377-6098424)
chr8 (308-355)||(16446739-16446786)
chr8 (308-355)||(23854295-23854342)
chr8 (308-355)||(33906491-33906538)
chr8 (308-355)||(38644257-38644304)
chr8 (308-355)||(43643459-43643506)
chr8 (308-355)||(466111-466158)
chr8 (308-355)||(1149784-1149831)
chr8 (308-355)||(1205206-1205253)
chr8 (308-355)||(5299810-5299857)
chr8 (308-355)||(11727303-11727350)
chr8 (308-355)||(16223142-16223189)
chr8 (312-355)||(24823262-24823305)
chr8 (308-355)||(37970383-37970430)
chr8 (308-355)||(39098983-39099030)
chr8 (313-355)||(40862698-40862740)
chr8 (308-354)||(44869777-44869823)
chr8 (315-355)||(27082709-27082749)
chr8 (308-355)||(7890821-7890868)
chr8 (308-355)||(12587861-12587908)
chr8 (308-355)||(34895241-34895288)
chr8 (308-355)||(35459575-35459622)
chr8 (15-81)||(26057884-26057950)
chr8 (308-355)||(8803680-8803728)
chr8 (308-355)||(1953852-1953899)
chr8 (308-355)||(12876389-12876436)
chr8 (308-355)||(18259358-18259405)
chr8 (308-355)||(33198081-33198128)
chr8 (308-355)||(35859213-35859260)
chr8 (308-355)||(36694830-36694877)
chr8 (317-355)||(10555077-10555115)
chr8 (315-355)||(9864427-9864467)
chr8 (308-355)||(30654446-30654494)
[»] chr4 (44 HSPs)
chr4 (308-355)||(33341678-33341725)
chr4 (308-355)||(17272244-17272291)
chr4 (308-355)||(19089337-19089384)
chr4 (308-355)||(19440532-19440579)
chr4 (308-355)||(25184393-25184440)
chr4 (308-355)||(29584084-29584131)
chr4 (308-355)||(35025450-35025497)
chr4 (308-355)||(37663625-37663672)
chr4 (308-355)||(50697522-50697569)
chr4 (308-355)||(879432-879479)
chr4 (308-355)||(6864315-6864362)
chr4 (308-355)||(9139509-9139556)
chr4 (308-355)||(23431835-23431882)
chr4 (308-355)||(32579726-32579773)
chr4 (308-355)||(33816400-33816447)
chr4 (308-355)||(37775938-37775985)
chr4 (308-355)||(50765000-50765047)
chr4 (308-354)||(23761352-23761398)
chr4 (308-354)||(27396897-27396943)
chr4 (308-354)||(30002525-30002571)
chr4 (309-355)||(34947980-34948026)
chr4 (308-354)||(55477775-55477821)
chr4 (308-353)||(47254022-47254067)
chr4 (308-355)||(32912463-32912511)
chr4 (311-355)||(37288008-37288052)
chr4 (308-355)||(4205264-4205311)
chr4 (308-355)||(7152088-7152135)
chr4 (308-355)||(7703789-7703836)
chr4 (308-355)||(28002870-28002917)
chr4 (308-354)||(34361375-34361422)
chr4 (308-355)||(46888042-46888089)
chr4 (308-355)||(49376247-49376294)
chr4 (309-355)||(32592364-32592410)
chr4 (308-354)||(39400289-39400335)
chr4 (310-355)||(3042899-3042944)
chr4 (308-345)||(46883998-46884035)
chr4 (308-355)||(1815581-1815628)
chr4 (308-355)||(17167993-17168040)
chr4 (308-355)||(17173570-17173617)
chr4 (308-355)||(36493573-36493620)
chr4 (320-355)||(42200010-42200045)
chr4 (308-355)||(55240989-55241036)
chr4 (308-350)||(4598267-4598309)
chr4 (314-355)||(35020925-35020966)
[»] scaffold0291 (1 HSPs)
scaffold0291 (308-355)||(8167-8214)
[»] scaffold0002 (3 HSPs)
scaffold0002 (308-355)||(408287-408334)
scaffold0002 (308-355)||(93958-94005)
scaffold0002 (308-356)||(407-455)
[»] chr7 (39 HSPs)
chr7 (308-355)||(18797582-18797629)
chr7 (308-355)||(27283999-27284046)
chr7 (308-355)||(29173777-29173824)
chr7 (308-355)||(30055782-30055829)
chr7 (308-355)||(31578923-31578970)
chr7 (308-355)||(37110129-37110176)
chr7 (308-355)||(5657340-5657387)
chr7 (308-355)||(9355685-9355732)
chr7 (308-355)||(11071458-11071505)
chr7 (308-355)||(12165998-12166045)
chr7 (308-355)||(15672618-15672665)
chr7 (308-355)||(17842443-17842490)
chr7 (308-355)||(22687486-22687533)
chr7 (308-355)||(26587951-26587998)
chr7 (308-355)||(31520600-31520647)
chr7 (308-355)||(33688121-33688168)
chr7 (308-355)||(37703357-37703404)
chr7 (308-355)||(37704437-37704484)
chr7 (308-355)||(48928156-48928203)
chr7 (309-355)||(10481860-10481906)
chr7 (308-354)||(35353364-35353410)
chr7 (311-355)||(44411402-44411446)
chr7 (308-355)||(7335048-7335095)
chr7 (308-355)||(12390508-12390555)
chr7 (308-354)||(24211997-24212044)
chr7 (308-355)||(32820912-32820959)
chr7 (308-355)||(37347276-37347323)
chr7 (308-351)||(43925354-43925397)
chr7 (308-355)||(46480988-46481035)
chr7 (308-355)||(4583174-4583221)
chr7 (308-355)||(6546774-6546821)
chr7 (308-355)||(8861540-8861587)
chr7 (308-355)||(10359073-10359120)
chr7 (308-355)||(15612618-15612665)
chr7 (308-347)||(23111455-23111494)
chr7 (308-355)||(25691403-25691450)
chr7 (308-355)||(32432707-32432754)
chr7 (308-355)||(34362037-34362084)
chr7 (308-355)||(41764937-41764984)
[»] chr6 (13 HSPs)
chr6 (308-355)||(3879796-3879843)
chr6 (308-355)||(6091039-6091086)
chr6 (308-353)||(4318679-4318724)
chr6 (308-355)||(7234892-7234939)
chr6 (308-355)||(20768362-20768409)
chr6 (308-355)||(33619110-33619157)
chr6 (308-356)||(6089182-6089230)
chr6 (308-355)||(8513508-8513555)
chr6 (308-355)||(33892869-33892916)
chr6 (308-355)||(5627671-5627719)
chr6 (308-356)||(21016975-21017023)
chr6 (308-355)||(1946114-1946162)
chr6 (308-355)||(7054629-7054677)
[»] chr3 (44 HSPs)
chr3 (308-355)||(4015730-4015777)
chr3 (308-355)||(11357239-11357286)
chr3 (308-355)||(22622576-22622623)
chr3 (308-355)||(26941118-26941165)
chr3 (308-355)||(42505933-42505980)
chr3 (308-355)||(46297620-46297667)
chr3 (308-355)||(51212629-51212676)
chr3 (311-355)||(45174777-45174821)
chr3 (308-355)||(22451239-22451286)
chr3 (308-355)||(46994519-46994566)
chr3 (308-355)||(50475082-50475129)
chr3 (308-355)||(54828559-54828606)
chr3 (308-354)||(29099618-29099664)
chr3 (310-355)||(40552119-40552164)
chr3 (315-355)||(34133206-34133246)
chr3 (308-355)||(2008203-2008250)
chr3 (308-355)||(7327340-7327387)
chr3 (308-355)||(14586538-14586585)
chr3 (308-355)||(29164080-29164127)
chr3 (308-355)||(32373741-32373788)
chr3 (308-355)||(33378643-33378690)
chr3 (308-355)||(43975750-43975797)
chr3 (308-355)||(48355212-48355259)
chr3 (308-355)||(53229010-53229057)
chr3 (308-350)||(1089969-1090011)
chr3 (308-354)||(36012411-36012457)
chr3 (308-354)||(44186375-44186421)
chr3 (308-353)||(3362528-3362573)
chr3 (308-353)||(40936246-40936291)
chr3 (308-353)||(44891770-44891815)
chr3 (311-355)||(11835494-11835538)
chr3 (308-355)||(21009659-21009707)
chr3 (308-356)||(24488820-24488868)
chr3 (308-355)||(47481793-47481841)
chr3 (310-354)||(3655060-3655106)
chr3 (308-347)||(25580018-25580057)
chr3 (308-355)||(33698424-33698471)
chr3 (308-355)||(37157979-37158026)
chr3 (308-355)||(39282923-39282970)
chr3 (308-355)||(52040780-52040827)
chr3 (308-354)||(54506079-54506126)
chr3 (308-354)||(22445923-22445969)
chr3 (313-355)||(53811597-53811639)
chr3 (310-355)||(21193878-21193923)
[»] chr2 (31 HSPs)
chr2 (308-355)||(18494157-18494204)
chr2 (308-355)||(41961120-41961167)
chr2 (308-354)||(26357858-26357904)
chr2 (308-355)||(4478645-4478692)
chr2 (308-355)||(5881809-5881856)
chr2 (308-355)||(7006814-7006861)
chr2 (308-355)||(19289199-19289246)
chr2 (308-355)||(27349824-27349871)
chr2 (308-355)||(33709108-33709155)
chr2 (308-351)||(35959176-35959219)
chr2 (308-354)||(19314128-19314174)
chr2 (310-355)||(2325256-2325301)
chr2 (308-353)||(19424518-19424563)
chr2 (308-355)||(11366256-11366304)
chr2 (308-348)||(19500791-19500831)
chr2 (308-355)||(4167202-4167249)
chr2 (308-355)||(4763911-4763958)
chr2 (308-355)||(31862132-31862179)
chr2 (308-355)||(33660253-33660300)
chr2 (308-355)||(37905990-37906037)
chr2 (308-355)||(41465781-41465828)
chr2 (308-355)||(43648121-43648168)
chr2 (308-354)||(43770724-43770770)
chr2 (308-355)||(3177219-3177266)
chr2 (308-355)||(13711739-13711786)
chr2 (308-347)||(31570610-31570649)
chr2 (310-353)||(33550865-33550908)
chr2 (308-355)||(41051176-41051223)
chr2 (308-355)||(44286229-44286276)
chr2 (308-354)||(4263952-4263998)
chr2 (308-354)||(41463466-41463512)
[»] chr1 (45 HSPs)
chr1 (308-355)||(2960024-2960071)
chr1 (308-355)||(11742221-11742268)
chr1 (308-355)||(14758308-14758355)
chr1 (308-355)||(27227338-27227385)
chr1 (308-355)||(27532834-27532881)
chr1 (308-355)||(51129135-51129182)
chr1 (308-354)||(3535200-3535246)
chr1 (308-354)||(30326805-30326851)
chr1 (310-355)||(30254699-30254744)
chr1 (308-355)||(238366-238413)
chr1 (308-355)||(1547547-1547594)
chr1 (308-355)||(3309429-3309476)
chr1 (308-355)||(10923003-10923050)
chr1 (308-355)||(16415922-16415969)
chr1 (308-355)||(18422927-18422974)
chr1 (308-355)||(25160908-25160955)
chr1 (308-355)||(28564636-28564683)
chr1 (308-355)||(32216331-32216378)
chr1 (308-355)||(37451561-37451608)
chr1 (308-355)||(40885089-40885136)
chr1 (310-355)||(15383209-15383254)
chr1 (310-355)||(27267055-27267100)
chr1 (308-356)||(9902907-9902955)
chr1 (311-355)||(10181863-10181907)
chr1 (308-355)||(19899621-19899669)
chr1 (308-355)||(23999623-23999671)
chr1 (311-351)||(32267314-32267354)
chr1 (311-355)||(37618757-37618801)
chr1 (308-355)||(4330557-4330604)
chr1 (308-355)||(8222404-8222450)
chr1 (308-355)||(15168372-15168419)
chr1 (308-355)||(27563758-27563805)
chr1 (308-355)||(28769929-28769976)
chr1 (308-355)||(34012235-34012282)
chr1 (308-355)||(38823490-38823537)
chr1 (308-355)||(39393660-39393707)
chr1 (308-355)||(47279465-47279512)
chr1 (308-355)||(47682347-47682394)
chr1 (308-355)||(48353818-48353865)
chr1 (308-354)||(21289877-21289923)
chr1 (308-355)||(46931685-46931733)
chr1 (308-355)||(7078916-7078963)
chr1 (308-355)||(41926433-41926479)
chr1 (308-355)||(42721312-42721359)
chr1 (308-355)||(27763163-27763211)
[»] scaffold0318 (1 HSPs)
scaffold0318 (308-355)||(12189-12236)
[»] scaffold0061 (1 HSPs)
scaffold0061 (308-355)||(44236-44283)
[»] scaffold0017 (1 HSPs)
scaffold0017 (308-355)||(154504-154551)
[»] scaffold0022 (1 HSPs)
scaffold0022 (308-355)||(145873-145921)
[»] scaffold0009 (1 HSPs)
scaffold0009 (315-355)||(100995-101035)


Alignment Details
Target: chr5 (Bit Score: 111; Significance: 6e-56; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 87 - 241
Target Start/End: Original strand, 15992169 - 15992321
Alignment:
Q  87 caatgcgagaaaatatgctttgtctaacagcttcactaatttccctacactctctttgtcctgtaaaaggaaaatccaatttagaatttcatatgaacat 186  Q
    |||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  15992169 caatgccagaaaatatgctt-gtctaacagcttcaataatttccctacactctctttgtcctgtaaaaggaaaatccaatttagaatttcaaatgaacat 15992267  T
Q  187 ttgatacgaacaaatgaaagaagagagcttctaccggtgcagtcatgaaactgac 241  Q
    |||||||||| ||||||||||||||| ||| |  |||||||||||||||||||||    
T  15992268 ttgatacgaagaaatgaaagaagagaactt-tttcggtgcagtcatgaaactgac 15992321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 15992020 - 15992096
Alignment:
Q  13 aatataagcattcaaagaaagaatctattcagattacaagtgcaaaaagataaatctactatgcaattgatgagcaa 89  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  15992020 aatataagcattcaaagaaagaatctattcagattacaagtgcaaaaagataaatctactatccaattgatgagcaa 15992096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 105 - 177
Target Start/End: Complemental strand, 39131524 - 39131451
Alignment:
Q  105 tttgtctaacagcttcactaatttccctacactctctttgtcctgtaaaaggaaaatccaa-tttagaatttca 177  Q
    |||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  39131524 tttgtctatcagcttcaccaaattccctacactctctttgtcctgtaaaaggaaaatccaacttaagaatttca 39131451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 1429010 - 1429057
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  1429010 tgatcaatagtaattcatctagtaatgcttgcaacatcttggacttac 1429057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 5830219 - 5830172
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  5830219 tgatcaatagtaattcatctagtaatgcttgcaacatcttggacttac 5830172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 15992388 - 15992435
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  15992388 tgatcaatagtaattcatctagtaatgcttgcaacatcttggacttac 15992435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 22019950 - 22019903
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||    
T  22019950 tgatcaatagtaattcatctagtaatgcttacaacatcttagacttac 22019903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 22973930 - 22973977
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  22973930 tgatcaatagtaattcatctagtaatgcttgcaacatcttggacttac 22973977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 24886414 - 24886367
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  24886414 tgatcaatagtaattcatctagtaatgcttgcaacatcttggacttac 24886367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 27330631 - 27330584
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  27330631 tgatcaatagtaattcatctagtaatgcttgcaacatcttggacttac 27330584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 35826334 - 35826381
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  35826334 tgatcaatagtaattcatctagtaatgcttgcaacatcttggacttac 35826381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 38528085 - 38528132
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  38528085 tgatcaatagtaattcatctagtaatgcttgcaacatcttggacttac 38528132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 39573138 - 39573091
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  39573138 tgatcaatagtaattcatctagtaatgcttgcaacatcttggacttac 39573091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 308 - 354
Target Start/End: Original strand, 31705460 - 31705506
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggactta 354  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||    
T  31705460 tgatcaatagtaattcatctagtaatgcttgcaacatcttggactta 31705506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 39131771 - 39131697
Alignment:
Q  15 tataagcattcaaagaaagaatctattcagattacaagtgcaaaaagataaatctactatgcaattgatgagcaa 89  Q
    |||||||||||||||||||| |||||||||||| |||||| | || | ||||||||| ||| |||||||||||||    
T  39131771 tataagcattcaaagaaagagtctattcagattccaagtgtagaatggtaaatctacaatgaaattgatgagcaa 39131697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 310 - 355
Target Start/End: Complemental strand, 699475 - 699430
Alignment:
Q  310 atcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  699475 atcaatagtaattcatctagtaatgcttgcaacatcttggacttac 699430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 311 - 355
Target Start/End: Complemental strand, 12910679 - 12910635
Alignment:
Q  311 tcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  12910679 tcaatagtaattcatctagtaatgcttgcaacatcttggacttac 12910635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 308 - 352
Target Start/End: Original strand, 13956210 - 13956254
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggact 352  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  13956210 tgatcaatagtaattcatctagtaatgcttgcaacatcttggact 13956254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 2888293 - 2888340
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||    
T  2888293 tgatcaatagtaattcatctagtaatgcttgtaacatcttggacttac 2888340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 8437292 - 8437245
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||    
T  8437292 tgatcaatagtaattcatctagtaatgttttcaacatcttggacttac 8437245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 8467053 - 8467006
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||    
T  8467053 tgatcaatagtaattcatctagtaatgcttgcaacattttggacttac 8467006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 21088614 - 21088661
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||    
T  21088614 tgattaatagtaattcatctagtaatgcttacaacatcttggatttac 21088661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 22255509 - 22255462
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||    
T  22255509 tgatcaatagtaattcatctagtaaggcttgcaacatcttggacttac 22255462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 25889697 - 25889650
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||    
T  25889697 tgatcaatagtaattcatctagtaatgctttcaacatcttggatttac 25889650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 43308508 - 43308555
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||    
T  43308508 tgatcaatagtaattcatctagtaatgcttgcaacatcttcgacttac 43308555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 308 - 354
Target Start/End: Complemental strand, 9200551 - 9200505
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggactta 354  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||    
T  9200551 tgatcaatagtaattcatctagtaatgcttgcaacatcttagactta 9200505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 308 - 354
Target Start/End: Original strand, 17157879 - 17157925
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggactta 354  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||    
T  17157879 tgatcaataataattcatctagtaatgcttgcaacatcttggactta 17157925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 308 - 354
Target Start/End: Original strand, 28416399 - 28416445
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggactta 354  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||    
T  28416399 tgatcaatagtaattcatcaagtaatgcttgcaacatcttggactta 28416445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 308 - 353
Target Start/End: Complemental strand, 5837882 - 5837837
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggactt 353  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||    
T  5837882 tgatcaacagtaattcatctagtaatgcttgcaacatcttggactt 5837837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 308 - 353
Target Start/End: Complemental strand, 19120186 - 19120141
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggactt 353  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||    
T  19120186 tgatcaatagtaattcatctagtaatgcttgcaacatcttagactt 19120141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 310 - 355
Target Start/End: Complemental strand, 35504690 - 35504645
Alignment:
Q  310 atcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||    
T  35504690 atcaatagtaattcatctagtaatacttgcaacatcttggacttac 35504645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 312 - 355
Target Start/End: Complemental strand, 7693544 - 7693501
Alignment:
Q  312 caatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||| ||||||||| |||||||    
T  7693544 caatagtaattcatctagtaatgcttgcaacatcttagacttac 7693501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 14409189 - 14409236
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||| |||||||| || |||||||||||||||||    
T  14409189 tgatcaatagtaattcatttagtaatgtttgcaacatcttggacttac 14409236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 15724815 - 15724768
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||| ||||||||||||||||||||||||||||| || ||||||||||    
T  15724815 tgattaatagtaattcatctagtaatgcttacaatattttggacttac 15724768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 22981120 - 22981073
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||| ||||||||||||||||| || |||||||||||||||||    
T  22981120 tgatcaataataattcatctagtaatgattgcaacatcttggacttac 22981073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 25669903 - 25669856
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||| || |||||||    
T  25669903 tgatcaatagtaattcatctagtaatgcttgcaacattttagacttac 25669856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 312 - 355
Target Start/End: Original strand, 31786498 - 31786541
Alignment:
Q  312 caatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  31786498 caatagtaattcatctagtaatgcttgcaacatcttggatttac 31786541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 33908559 - 33908513
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||    
T  33908559 tgatcaatagtaatt-atctagtaatgcttgcaacatcttggacttac 33908513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 35511330 - 35511377
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||| ||||||||||| |||||||||| ||||||    
T  35511330 tgatcaatagtaattcatatagtaatgcttgcaacatcttgaacttac 35511377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 35934223 - 35934176
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||| ||||||| |||||||||||| |||||||||||||||||    
T  35934223 tgatcaataataattcaactagtaatgcttgcaacatcttggacttac 35934176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 36860751 - 36860704
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||| ||||||||||||| ||||||||||| |||||||||||||||||    
T  36860751 tgattaatagtaattcatttagtaatgcttgcaacatcttggacttac 36860704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 40133712 - 40133665
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||| |||||||||||||| |||||||||| |||||||||||||||||    
T  40133712 tgattaatagtaattcatccagtaatgcttgcaacatcttggacttac 40133665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 42343048 - 42343001
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||| ||||||||||||||||||||| ||||||||| |||||||    
T  42343048 tgatcaatggtaattcatctagtaatgcttgcaacatcttagacttac 42343001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 7208712 - 7208759
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||| |||||||||||||||| ||| |||||||||| ||||||    
T  7208712 tgatcaataataattcatctagtaatacttgcaacatcttgaacttac 7208759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 8741733 - 8741780
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||| |||||||||| |||||| |||||| ||||||||||    
T  8741733 tgatcaatagtatttcatctagtgatgcttgcaacattttggacttac 8741780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 25500774 - 25500821
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||| |||| ||||||||||||||||| ||||||||| |||||||    
T  25500774 tgatcaacagtatttcatctagtaatgcttgcaacatcttagacttac 25500821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 36867089 - 36867042
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||| |||||||||||||| ||||||| || |||||||||||||||||    
T  36867089 tgattaatagtaattcatccagtaatgtttgcaacatcttggacttac 36867042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 336
Target Start/End: Complemental strand, 43254182 - 43254154
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgct 336  Q
    |||||||||||||||||||||||||||||    
T  43254182 tgatcaatagtaattcatctagtaatgct 43254154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 69; Significance: 7e-31; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 105 - 205
Target Start/End: Complemental strand, 26057738 - 26057638
Alignment:
Q  105 tttgtctaacagcttcactaatttccctacactctctttgtcctgtaaaaggaaaatccaatttagaatttcatatgaacatttgatacgaacaaatgaa 204  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||   ||||||||||||||||||||| |||    
T  26057738 tttgtctatcagcttcactaaattccctacactctctttgtcctgtaaaaggataatccaacttagaatttctactgaacatttgatacgaacaaaagaa 26057639  T
Q  205 a 205  Q
    |    
T  26057638 a 26057638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 1149496 - 1149543
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  1149496 tgatcaatagtaattcatctagtaatgcttgcaacatcttggacttac 1149543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 4132550 - 4132597
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  4132550 tgatcaatagtaattcatctagtaatgcttgcaacatcttggacttac 4132597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 6098377 - 6098424
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  6098377 tgatcaatagtaattcatctagtaatgcttgcaacatcttggacttac 6098424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 16446739 - 16446786
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  16446739 tgatcaatagtaattcatctagtaatgcttgcaacatcttggacttac 16446786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 23854295 - 23854342
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  23854295 tgatcaatagtaattcatctagtaatgcttgcaacatcttggacttac 23854342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 33906538 - 33906491
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  33906538 tgatcaatagtaattcatctagtaatgcttgcaacatcttggacttac 33906491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 38644304 - 38644257
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  38644304 tgatcaatagtaattcatctagtaatgcttgcaacatcttggacttac 38644257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 43643459 - 43643506
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  43643459 tgatcaatagtaattcatctagtaatgcttgcaacatcttggacttac 43643506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 466158 - 466111
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||    
T  466158 tgatcaatagtaattcatctagtaatgcttgcaacatcttagacttac 466111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 1149784 - 1149831
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||    
T  1149784 tgatcaatagtaattcatctagtaatgcttgcaacatcttagacttac 1149831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 1205253 - 1205206
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||    
T  1205253 tgatcaatagtaattcatctagtaatacttgcaacatcttggacttac 1205206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 5299810 - 5299857
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||    
T  5299810 tgattaatagtaattcatctagtaatgcttgcaacatcttggacttac 5299857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 11727350 - 11727303
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||    
T  11727350 tgatcaatagtaattcatctagtaatgcttgcaacatcttagacttac 11727303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 16223189 - 16223142
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||    
T  16223189 tgatcaatagtaattcatctagtaatgcttgcaacatcttagacttac 16223142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 312 - 355
Target Start/End: Original strand, 24823262 - 24823305
Alignment:
Q  312 caatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  24823262 caatagtaattcatctagtaatgcttgcaacatcttggacttac 24823305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 37970383 - 37970430
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||    
T  37970383 tgatcaacagtaattcatctagtaatgcttgcaacatcttggacttac 37970430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 39098983 - 39099030
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||    
T  39098983 tgatcaatagtaattcatctagtaatgcttgcaacattttggacttac 39099030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 313 - 355
Target Start/End: Complemental strand, 40862740 - 40862698
Alignment:
Q  313 aatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  40862740 aatagtaattcatctagtaatgcttgcaacatcttggacttac 40862698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 308 - 354
Target Start/End: Complemental strand, 44869823 - 44869777
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggactta 354  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||||    
T  44869823 tgatcaatagtaattcatctagtaatgcttgcaatatcttggactta 44869777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 315 - 355
Target Start/End: Original strand, 27082709 - 27082749
Alignment:
Q  315 tagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  27082709 tagtaattcatctagtaatgcttgcaacatcttggacttac 27082749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 7890821 - 7890868
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||| || |||||||    
T  7890821 tgatcaatagtaattcatctagtaatgcttgcaacattttagacttac 7890868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 12587908 - 12587861
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| ||| ||||| |||||||    
T  12587908 tgatcaatagtaattcatctagtaatgcttgcaaaatctttgacttac 12587861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 34895288 - 34895241
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||| ||||||||||| |||||||||| ||||||    
T  34895288 tgatcaatagtaattcatatagtaatgcttgcaacatcttgaacttac 34895241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 35459575 - 35459622
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||||||||||||||||| || |||||| ||||||||||    
T  35459575 tgatcaatagtaattcatctagtaatgtttgcaacattttggacttac 35459622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 26057950 - 26057884
Alignment:
Q  15 tataagcattcaaagaaagaatctattcagattacaagtgcaaaaagataaatctactatgcaattg 81  Q
    |||||| |||||||||||||| |||||||||||||||||||| |  | ||| |||| ||||||||||    
T  26057950 tataagaattcaaagaaagaacctattcagattacaagtgcagattggtaattctattatgcaattg 26057884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 8803680 - 8803728
Alignment:
Q  308 tgatcaatagta-attcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||| |||||||| ||||||||| |||||||||||||||||    
T  8803680 tgatcaatagtatattcatctggtaatgcttgcaacatcttggacttac 8803728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 1953852 - 1953899
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||||||||||| |||||||| ||| |||||||| ||||    
T  1953852 tgatcaatagtaattcatctaataatgcttgcaaaatcttggatttac 1953899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 12876436 - 12876389
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||| ||||||||||||||||||||||| |  ||||||||||||||||    
T  12876436 tgataaatagtaattcatctagtaatgcctgtaacatcttggacttac 12876389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 18259405 - 18259358
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||| | |||||||||||||||||||| ||||||||| |||||||    
T  18259405 tgatcaacaataattcatctagtaatgcttgcaacatcttagacttac 18259358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 33198128 - 33198081
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||||||||||||| |||||| |||||| || |||||||    
T  33198128 tgatcaatagtaattcatctagtgatgcttgcaacattttagacttac 33198081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 35859260 - 35859213
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||| |||||||||||||||||||| |||||||| | ||||||    
T  35859260 tgatcaatattaattcatctagtaatgcttgcaacatctcgaacttac 35859213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 36694830 - 36694877
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||| |||||||||||||||||| |||||| |||||||||||| ||||    
T  36694830 tgataaatagtaattcatctagtgatgcttgcaacatcttggatttac 36694877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 355
Target Start/End: Original strand, 10555077 - 10555115
Alignment:
Q  317 gtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||||||||||| ||| |||||||||||||    
T  10555077 gtaattcatctagtaatgcttgcaatatcttggacttac 10555115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 355
Target Start/End: Complemental strand, 9864467 - 9864427
Alignment:
Q  315 tagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||| |||||||||||||||||| |||||||||| ||||||    
T  9864467 tagttattcatctagtaatgcttgcaacatcttgaacttac 9864427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 30654446 - 30654494
Alignment:
Q  308 tgatcaatagta-attcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||| || |||||| ||||||||||| |||||||||||||||||    
T  30654446 tgatcaataatatattcatttagtaatgcttgcaacatcttggacttac 30654494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 2e-18; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 33341725 - 33341678
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  33341725 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 33341678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 17272291 - 17272244
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  17272291 tgatcaatagtaattcatctagtaatgcttgcaacatcttggacttac 17272244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 19089337 - 19089384
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  19089337 tgatcaatagtaattcatctagtaatgcttgcaacatcttggacttac 19089384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 19440532 - 19440579
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  19440532 tgatcaatagtaattcatctagtaatgcttgcaacatcttggacttac 19440579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 25184440 - 25184393
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  25184440 tgatcaatagtaattcatctagtaatgcttgcaacatcttggacttac 25184393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 29584084 - 29584131
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  29584084 tgatcaatagtaattcatctagtaatgcttgcaacatcttggacttac 29584131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 35025450 - 35025497
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  35025450 tgatcaatagtaattcatctagtaatgcttgcaacatcttggacttac 35025497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 37663625 - 37663672
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  37663625 tgatcaatagtaattcatctagtaatgcttgcaacatcttggacttac 37663672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 50697569 - 50697522
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  50697569 tgatcaatagtaattcatctagtaatgcttacaacatcttggaattac 50697522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 879432 - 879479
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||    
T  879432 tgatcaataataattcatctagtaatgcttgcaacatcttggacttac 879479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 6864362 - 6864315
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||    
T  6864362 tgatcaatagtaattcatctagtaatgcttgcaacatcttgaacttac 6864315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 9139556 - 9139509
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||    
T  9139556 tgatcaatagtaattcgtctagtaatgcttgcaacatcttggacttac 9139509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 23431882 - 23431835
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||    
T  23431882 tgatcaatagtaattcatctactaatgcttgcaacatcttggacttac 23431835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 32579773 - 32579726
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||    
T  32579773 tgatcaatagtaattcatctagtaatgtttgcaacatcttggacttac 32579726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 33816400 - 33816447
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||    
T  33816400 tgatcaatagtaattcatctagtaatgtttgcaacatcttggacttac 33816447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 37775985 - 37775938
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||    
T  37775985 tgatcaatagtaattcatctagtaatgcttgcaacatcttagacttac 37775938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 50765047 - 50765000
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||    
T  50765047 tgatcaatagtaattcatctagtaatgcttgcaacatcttagacttac 50765000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 308 - 354
Target Start/End: Complemental strand, 23761398 - 23761352
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggactta 354  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||    
T  23761398 tgatcaataataattcatctagtaatgcttgcaacatcttggactta 23761352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 308 - 354
Target Start/End: Complemental strand, 27396943 - 27396897
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggactta 354  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||    
T  27396943 tgatcaatagtaattcatctagtaatgcttgcaacattttggactta 27396897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 308 - 354
Target Start/End: Original strand, 30002525 - 30002571
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggactta 354  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||    
T  30002525 tgatcaatagtaattcatctagtaatgcttgcaacatcttagactta 30002571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 309 - 355
Target Start/End: Original strand, 34947980 - 34948026
Alignment:
Q  309 gatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||    
T  34947980 gatcaatagtatttcatctagtaatgcttgcaacatcttggacttac 34948026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 308 - 354
Target Start/End: Original strand, 55477775 - 55477821
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggactta 354  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||    
T  55477775 tgattaatagtaattcatctagtaatgcttgcaacatcttggactta 55477821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 308 - 353
Target Start/End: Complemental strand, 47254067 - 47254022
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggactt 353  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||    
T  47254067 tgatcaatagtaattcatctagtaatgcttgcaacatcttagactt 47254022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 32912463 - 32912511
Alignment:
Q  308 tgatcaatagta-attcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||||    
T  32912463 tgatcaatagtatattcatctagtaatgcttgcaacatcttggacttac 32912511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 311 - 355
Target Start/End: Complemental strand, 37288052 - 37288008
Alignment:
Q  311 tcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||| |||||||| |||||||||||||||||    
T  37288052 tcaatagtaattcatctaataatgcttgcaacatcttggacttac 37288008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 4205311 - 4205264
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||| |||||||||||||||||| |||||| |||||||||||||||||    
T  4205311 tgataaatagtaattcatctagtgatgcttgcaacatcttggacttac 4205264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 7152088 - 7152135
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||||||||||| |||||||| ||| |||||||||||||    
T  7152088 tgatcaatagtaattcatctaataatgcttgcaaaatcttggacttac 7152135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 7703836 - 7703789
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||| ||||||||||||||||||||||||| ||||||||| |||||||    
T  7703836 tgataaatagtaattcatctagtaatgcttgcaacatcttcgacttac 7703789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 28002870 - 28002917
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||||||||||||||||| |  |||||||||||||||||    
T  28002870 tgatcaatagtaattcatctagtaatgttagcaacatcttggacttac 28002917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 354
Target Start/End: Original strand, 34361375 - 34361422
Alignment:
Q  308 tgatcaatagta-attcatctagtaatgcttacaacatcttggactta 354  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||    
T  34361375 tgatcaatagtatattcatctagtaatgcttgcaacatcttggactta 34361422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 46888042 - 46888089
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||||||||||||||||||||  ||||||||||| ||||    
T  46888042 tgatcaatagtaattcatctagtaatgcttgtaacatcttggatttac 46888089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 49376294 - 49376247
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||| ||||||||||| |||| ||||||||||||    
T  49376294 tgatcaatagtaattcatttagtaatgctttcaacttcttggacttac 49376247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 309 - 355
Target Start/End: Complemental strand, 32592410 - 32592364
Alignment:
Q  309 gatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||||||| ||||||||||| |||||||||| ||||||    
T  32592410 gatcaatagtaattcatttagtaatgctttcaacatcttgaacttac 32592364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 308 - 354
Target Start/End: Complemental strand, 39400335 - 39400289
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggactta 354  Q
    ||||||||||| |||||||||||||||||| |||||||||| |||||    
T  39400335 tgatcaatagtcattcatctagtaatgcttgcaacatcttgaactta 39400289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 310 - 355
Target Start/End: Complemental strand, 3042944 - 3042899
Alignment:
Q  310 atcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||| |||||||||||||||||||| |||||| ||||||||||    
T  3042944 atcaatactaattcatctagtaatgcttgcaacatgttggacttac 3042899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 308 - 345
Target Start/End: Original strand, 46883998 - 46884035
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatc 345  Q
    |||||||||||||||||||||||||||||| |||||||    
T  46883998 tgatcaatagtaattcatctagtaatgcttgcaacatc 46884035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 1815628 - 1815581
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||| |||||||||||||||||| || |||||||||||| ||||    
T  1815628 tgatcaattgtaattcatctagtaatgtttgcaacatcttggatttac 1815581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 17168040 - 17167993
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||| |||||||||||||||||| |||||| ||||||||| |||||||    
T  17168040 tgataaatagtaattcatctagtgatgcttgcaacatcttagacttac 17167993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 17173617 - 17173570
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||| |||||||||||||||||| |||||| ||||||||| |||||||    
T  17173617 tgataaatagtaattcatctagtgatgcttgcaacatcttagacttac 17173570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 36493573 - 36493620
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||||||||| |||||||||| ||| ||||| |||||||    
T  36493573 tgatcaatagtaattcatcgagtaatgcttgcaatatcttagacttac 36493620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 320 - 355
Target Start/End: Complemental strand, 42200045 - 42200010
Alignment:
Q  320 attcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||| |||||||||||||||||    
T  42200045 attcatctagtaatgcttgcaacatcttggacttac 42200010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 55240989 - 55241036
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||| |||||||||| ||||||||||| || |||||||||||||||||    
T  55240989 tgattaatagtaatttatctagtaatgtttgcaacatcttggacttac 55241036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 350
Target Start/End: Complemental strand, 4598309 - 4598267
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttgga 350  Q
    ||||||||||||||| ||||| |||||||| ||||||||||||    
T  4598309 tgatcaatagtaattaatctaataatgcttgcaacatcttgga 4598267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 314 - 355
Target Start/End: Original strand, 35020925 - 35020966
Alignment:
Q  314 atagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  35020925 atagtaattcatctagtaatgtttgcaatatcttggacttac 35020966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 8214 - 8167
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  8214 tgatcaatagtaattcatctagtaatgcttgcaacatcttggacttac 8167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 44; Significance: 6e-16; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 408287 - 408334
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  408287 tgatcaatagtaattcatctagtaatgcttgcaacatcttggacttac 408334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 93958 - 94005
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||    
T  93958 tgatcaatagcaattcatctagtaatgcttgcaacatcttggacttac 94005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 455 - 407
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttact 356  Q
    |||| ||||||||||||||||||||||||| ||||||||||||| ||||    
T  455 tgattaatagtaattcatctagtaatgcttgcaacatcttggacgtact 407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 6e-16; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 18797629 - 18797582
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  18797629 tgatcaatagtaattcatctagtaatgcttgcaacatcttggacttac 18797582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 27284046 - 27283999
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  27284046 tgatcaatagtaattcatctagtaatgcttgcaacatcttggacttac 27283999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 29173824 - 29173777
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  29173824 tgatcaatagtaattcatctagtaatgcttgcaacatcttggacttac 29173777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 30055829 - 30055782
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  30055829 tgatcaatagtaattcatctagtaatgcttgcaacatcttggacttac 30055782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 31578923 - 31578970
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  31578923 tgatcaatagtaattcatctagtaatgcttgcaacatcttggacttac 31578970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 37110176 - 37110129
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  37110176 tgatcaatagtaattcatctagtaatgcttgcaacatcttggacttac 37110129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 5657340 - 5657387
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||    
T  5657340 tgatcaatagtaattcatctagtaatgcttgcaacatcttagacttac 5657387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 9355685 - 9355732
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||    
T  9355685 tgatcaatagcaattcatctagtaatgcttgcaacatcttggacttac 9355732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 11071505 - 11071458
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||    
T  11071505 tgatcaatagtaattcatctagtaatgtttgcaacatcttggacttac 11071458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 12166045 - 12165998
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||    
T  12166045 tgatcaatagtaattcatctagtaatgcttgcaacatcttagacttac 12165998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 15672618 - 15672665
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||    
T  15672618 tgatcaatagtaattcatctagtaatgcttgcaacattttggacttac 15672665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 17842443 - 17842490
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||    
T  17842443 tgatcaatagtaattcatctaataatgcttgcaacatcttggacttac 17842490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 22687533 - 22687486
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||    
T  22687533 tgatcaatagtaattcatctattaatgcttgcaacatcttggacttac 22687486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 26587951 - 26587998
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||    
T  26587951 tgatcaatagtaattcatctagtaatgcctgcaacatcttggacttac 26587998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 31520600 - 31520647
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||    
T  31520600 tgatcaatagtaattcatcgagtaatgcttgcaacatcttggacttac 31520647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 33688121 - 33688168
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||    
T  33688121 tgatcaatagcaattcatctagtaatgcttgcaacatcttggacttac 33688168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 37703357 - 37703404
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||    
T  37703357 tgatcaatagtaattcatctagtaatgtttgcaacatcttggacttac 37703404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 37704484 - 37704437
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||    
T  37704484 tgatcaatagtaattcatctggtaatgcttgcaacatcttggacttac 37704437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 48928156 - 48928203
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||    
T  48928156 tgatcaatagtaattcatctagtaatgtttgcaacatcttggacttac 48928203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 309 - 355
Target Start/End: Complemental strand, 10481906 - 10481860
Alignment:
Q  309 gatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||    
T  10481906 gatcaatagtaattcatctagtaatacttgcaacatcttggacttac 10481860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 308 - 354
Target Start/End: Complemental strand, 35353410 - 35353364
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggactta 354  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||    
T  35353410 tgatcaatagtgattcatctagtaatgcttgcaacatcttggactta 35353364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 311 - 355
Target Start/End: Original strand, 44411402 - 44411446
Alignment:
Q  311 tcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||| |||||||||||||||||||| |||||||||||||||||    
T  44411402 tcaatattaattcatctagtaatgcttgcaacatcttggacttac 44411446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 7335095 - 7335048
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||| ||||||||||||||||||||||||| |||||||||||| ||||    
T  7335095 tgattaatagtaattcatctagtaatgcttgcaacatcttggatttac 7335048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 12390508 - 12390555
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||| |||||||||||||||||||||| || |||||||||||||||||    
T  12390508 tgataaatagtaattcatctagtaatggttgcaacatcttggacttac 12390555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 354
Target Start/End: Complemental strand, 24212044 - 24211997
Alignment:
Q  308 tgatcaatagta-attcatctagtaatgcttacaacatcttggactta 354  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||    
T  24212044 tgatcaatagtatattcatctagtaatgcttgcaacatcttggactta 24211997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 32820912 - 32820959
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||| ||||||||||||||||||||||||| ||||||||| |||||||    
T  32820912 tgattaatagtaattcatctagtaatgcttgcaacatcttagacttac 32820959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 37347323 - 37347276
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||||||||| |||||||||| ||| |||||||||||||    
T  37347323 tgatcaatagtaattcatcgagtaatgcttgcaatatcttggacttac 37347276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 351
Target Start/End: Complemental strand, 43925397 - 43925354
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggac 351  Q
    |||| ||||||||||||||||||||||||| |||||||||||||    
T  43925397 tgattaatagtaattcatctagtaatgcttgcaacatcttggac 43925354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 46480988 - 46481035
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||||||||||||||||| || ||||||||| |||||||    
T  46480988 tgatcaatagtaattcatctagtaatgtttgcaacatcttagacttac 46481035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 4583221 - 4583174
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||| |||||||||||||| |||||||||| |||||||||| ||||||    
T  4583221 tgattaatagtaattcatccagtaatgcttgcaacatcttgaacttac 4583174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 6546821 - 6546774
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |  |||||| |||||||    
T  6546821 tgatcaatagtaattcatctagtaatgcttgcctcatcttagacttac 6546774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 8861587 - 8861540
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||| ||||||||||||||| | ||||||||| |||||||    
T  8861587 tgatcaatagtatttcatctagtaatgcatgcaacatcttagacttac 8861540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 10359073 - 10359120
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||| |||| ||||||||||| ||| |||||||||||||    
T  10359073 tgatcaatagtaaatcatttagtaatgcttgcaaaatcttggacttac 10359120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 15612618 - 15612665
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||| | |||||||||||||||||||| ||||||||| |||||||    
T  15612618 tgatcaacaataattcatctagtaatgcttgcaacatcttagacttac 15612665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 347
Target Start/End: Complemental strand, 23111494 - 23111455
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatctt 347  Q
    |||||||||||||||| ||||||||||||| |||||||||    
T  23111494 tgatcaatagtaattcttctagtaatgctttcaacatctt 23111455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 25691403 - 25691450
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||||||||||||||||| || |||||| ||| ||||||    
T  25691403 tgatcaatagtaattcatctagtaatgtttgcaacattttgaacttac 25691450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 32432754 - 32432707
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||| |||| |||||||||||||||||||| ||||| |||||||||||    
T  32432754 tgattaataataattcatctagtaatgcttgcaacaccttggacttac 32432707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 34362037 - 34362084
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||| ||||||||||||||||||| || ||| |||||||||||||    
T  34362037 tgatcaaaagtaattcatctagtaatgtttgcaatatcttggacttac 34362084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 41764937 - 41764984
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||| ||||||||| |||||||||| ||| |||||||||||||    
T  41764937 tgatcaataataattcatccagtaatgcttgcaaaatcttggacttac 41764984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 6e-16; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 3879796 - 3879843
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  3879796 tgatcaatagtaattcatctagtaatgcttgcaacatcttggacttac 3879843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 6091039 - 6091086
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  6091039 tgatcaatagtaattcatctagtaatgcttgcaacatcttggacttac 6091086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 308 - 353
Target Start/End: Original strand, 4318679 - 4318724
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggactt 353  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    
T  4318679 tgatcaatagtaattcatctagtaatgcttgcaacatcttggactt 4318724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 7234892 - 7234939
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||    
T  7234892 tgatcaatagtaattcatctagtaatgtttgcaacatcttggacttac 7234939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 20768409 - 20768362
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||    
T  20768409 tgatcaatagtaattcatctagtaatgcttgcaacaccttggacttac 20768362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 33619157 - 33619110
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||    
T  33619157 tgatcaatagtaattcatctagtaatgcttgcaacatattggacttac 33619110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 6089230 - 6089182
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttact 356  Q
    |||||||||||||||||| ||||||||||| |||||| |||||||||||    
T  6089230 tgatcaatagtaattcatatagtaatgcttgcaacattttggacttact 6089182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 8513555 - 8513508
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| ||| || ||||||||||    
T  8513555 tgatcaatagtaattcatctagtaatgcttgcaagattttggacttac 8513508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 33892869 - 33892916
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||| |||||||| || |||||||||||||||||    
T  33892869 tgatcaatagtaattcatttagtaatgtttgcaacatcttggacttac 33892916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 5627719 - 5627671
Alignment:
Q  308 tgatcaatagta-attcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||| ||||| |||||||||||| |||||||||||||||||    
T  5627719 tgatcaatagtatattcacctagtaatgcttgcaacatcttggacttac 5627671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 21016975 - 21017023
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttact 356  Q
    |||| ||||||||||||||||||||||||| ||||||||| ||| ||||    
T  21016975 tgattaatagtaattcatctagtaatgcttgcaacatcttagacgtact 21017023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 1946162 - 1946114
Alignment:
Q  308 tgatcaatagta-attcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||| ||||||||| ||||||||  ||||||||||||||||    
T  1946162 tgatcaatagtatattcatctaataatgcttgtaacatcttggacttac 1946114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 7054629 - 7054677
Alignment:
Q  308 tgatcaatagta-attcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||| |||||| |||||||| || |||||||||||||||||    
T  7054629 tgatcaatagtatattcatttagtaatgtttgcaacatcttggacttac 7054677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 6e-16; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 4015777 - 4015730
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  4015777 tgatcaatagtaattcatctagtaatgcttgcaacatcttggacttac 4015730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 11357239 - 11357286
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  11357239 tgatcaatagtaattcatctagtaatgcttgcaacatcttggacttac 11357286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 22622576 - 22622623
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  22622576 tgatcaatagtaattcatctagtaatgcttgcaacatcttggacttac 22622623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 26941118 - 26941165
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  26941118 tgatcaatagtaattcatctagtaatgcttgcaacatcttggacttac 26941165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 42505933 - 42505980
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  42505933 tgatcaatagtaattcatctagtaatgcttgcaacatcttggacttac 42505980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 46297620 - 46297667
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  46297620 tgatcaatagtaattcatctagtaatgcttgcaacatcttggacttac 46297667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 51212629 - 51212676
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  51212629 tgatcaatagtaattcatctagtaatgcttgcaacatcttggacttac 51212676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 311 - 355
Target Start/End: Complemental strand, 45174821 - 45174777
Alignment:
Q  311 tcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  45174821 tcaatagtaattcatctagtaatgcttgcaacatcttggacttac 45174777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 22451286 - 22451239
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||    
T  22451286 tgatcaataataattcatctagtaatgcttgcaacatcttggacttac 22451239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 46994519 - 46994566
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||    
T  46994519 tgatcaatagtaattcatctagtaatgcttgcaatatcttggacttac 46994566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 50475129 - 50475082
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||    
T  50475129 tgatcaatactaattcatctagtaatgcttgcaacatcttggacttac 50475082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 54828559 - 54828606
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||    
T  54828559 tgatcaatagtaatttatctagtaatgcttgcaacatcttggacttac 54828606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 308 - 354
Target Start/End: Complemental strand, 29099664 - 29099618
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggactta 354  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||    
T  29099664 tgatcaatggtaattcatctagtaatgcttgcaacatcttggactta 29099618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 310 - 355
Target Start/End: Original strand, 40552119 - 40552164
Alignment:
Q  310 atcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||    
T  40552119 atcaatagtaattcatctagtaatgcttgcaacatcatggacttac 40552164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 315 - 355
Target Start/End: Complemental strand, 34133246 - 34133206
Alignment:
Q  315 tagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  34133246 tagtaattcatctagtaatgcttgcaacatcttggacttac 34133206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 2008250 - 2008203
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||| || ||||||||||||||||| |||||||||||||||||    
T  2008250 tgatcaatattatttcatctagtaatgcttgcaacatcttggacttac 2008203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 7327340 - 7327387
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||| ||||||||||||||||||||||||| ||||||||| |||||||    
T  7327340 tgattaatagtaattcatctagtaatgcttgcaacatcttagacttac 7327387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 14586538 - 14586585
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||| |||||||| |||||||||||||| |||||||||||||||||    
T  14586538 tgatcagtagtaatttatctagtaatgcttgcaacatcttggacttac 14586585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 29164127 - 29164080
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||||||||||||||||||||  |||||||| |||||||    
T  29164127 tgatcaatagtaattcatctagtaatgcttgtaacatcttagacttac 29164080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 32373788 - 32373741
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||| ||||||||||||||||||| ||||||||| |||||||    
T  32373788 tgatcaatagaaattcatctagtaatgcttgcaacatcttagacttac 32373741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 33378643 - 33378690
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||||||||||||||||| || |||||||||| ||||||    
T  33378643 tgatcaatagtaattcatctagtaatgtttgcaacatcttgaacttac 33378690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 43975750 - 43975797
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||| |||||||||||||||||||| ||| |||||||||||||    
T  43975750 tgatcaatattaattcatctagtaatgcttgcaaaatcttggacttac 43975797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 48355259 - 48355212
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||| |||||||||||||||| ||| |||||||||||||||||    
T  48355259 tgatcaataataattcatctagtaatacttgcaacatcttggacttac 48355212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 53229010 - 53229057
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||| |||||||||||||||||||| |||||||||| ||||||    
T  53229010 tgatcaatactaattcatctagtaatgcttgcaacatcttgaacttac 53229057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 308 - 350
Target Start/End: Complemental strand, 1090011 - 1089969
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttgga 350  Q
    |||||||||||||||||||||||||||||| ||| ||||||||    
T  1090011 tgatcaatagtaattcatctagtaatgcttgcaaaatcttgga 1089969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 308 - 354
Target Start/End: Complemental strand, 36012457 - 36012411
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggactta 354  Q
    |||||||||||||||||||||||||||||| || ||| |||||||||    
T  36012457 tgatcaatagtaattcatctagtaatgcttgcagcattttggactta 36012411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 308 - 354
Target Start/End: Original strand, 44186375 - 44186421
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggactta 354  Q
    ||||||||||||||| |||||||||||||| ||||||||| ||||||    
T  44186375 tgatcaatagtaatttatctagtaatgcttgcaacatcttagactta 44186421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 308 - 353
Target Start/End: Complemental strand, 3362573 - 3362528
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggactt 353  Q
    ||||||||||||||||||| |||||||||| |||||| ||||||||    
T  3362573 tgatcaatagtaattcatccagtaatgcttgcaacatattggactt 3362528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 308 - 353
Target Start/End: Complemental strand, 40936291 - 40936246
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggactt 353  Q
    ||||||||||||||| |||||||||||||| ||||||||| |||||    
T  40936291 tgatcaatagtaatttatctagtaatgcttgcaacatcttagactt 40936246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 308 - 353
Target Start/End: Complemental strand, 44891815 - 44891770
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggactt 353  Q
    ||||||| |||||||||||||||||||||| ||||||||| |||||    
T  44891815 tgatcaacagtaattcatctagtaatgcttgcaacatcttagactt 44891770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 355
Target Start/End: Original strand, 11835494 - 11835538
Alignment:
Q  311 tcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||||| |||||||| || |||||||||||||||||    
T  11835494 tcaatagtaattcatttagtaatgtttgcaacatcttggacttac 11835538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 21009659 - 21009707
Alignment:
Q  308 tgatcaatagta-attcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||| |||||||||||||||||| ||||||||| |||||||    
T  21009659 tgatcaatagtatattcatctagtaatgcttgcaacatcttagacttac 21009707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 24488820 - 24488868
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttact 356  Q
    |||| ||||||||| ||||||||||||||| |||||||||| |||||||    
T  24488820 tgattaatagtaatgcatctagtaatgcttgcaacatcttgaacttact 24488868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 47481841 - 47481793
Alignment:
Q  308 tgatcaatagta-attcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||| |||||||||||||||||| |||||||||| ||||||    
T  47481841 tgatcaatagtatattcatctagtaatgcttgcaacatcttgaacttac 47481793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 310 - 354
Target Start/End: Original strand, 3655060 - 3655106
Alignment:
Q  310 atcaatagtaattcat--ctagtaatgcttacaacatcttggactta 354  Q
    ||||||||||||||||  |||||||||||| ||||||||||||||||    
T  3655060 atcaatagtaattcatatctagtaatgcttgcaacatcttggactta 3655106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 347
Target Start/End: Complemental strand, 25580057 - 25580018
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatctt 347  Q
    |||||||||||||||||||||||||||||| ||| |||||    
T  25580057 tgatcaatagtaattcatctagtaatgcttgcaatatctt 25580018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 33698471 - 33698424
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||| |||||||||||||||||||| ||| ||||| |||||||    
T  33698471 tgatcaatattaattcatctagtaatgcttgcaatatcttagacttac 33698424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 37158026 - 37157979
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||| ||||||||||||||||||||| | |||| ||||||||||    
T  37158026 tgatcaatggtaattcatctagtaatgcttgcgacatattggacttac 37157979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 39282970 - 39282923
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||| ||||||||||||||||||||||||| |||||| ||||| ||||    
T  39282970 tgattaatagtaattcatctagtaatgcttgcaacattttggatttac 39282923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 52040780 - 52040827
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||| | ||||||||||||||| || |||||||||||||||||    
T  52040780 tgatcaataatcattcatctagtaatgtttgcaacatcttggacttac 52040827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 354
Target Start/End: Complemental strand, 54506126 - 54506079
Alignment:
Q  308 tgatcaatagta-attcatctagtaatgcttacaacatcttggactta 354  Q
    |||||||||||| |||||||||||||||||| |||||| |||||||||    
T  54506126 tgatcaatagtatattcatctagtaatgcttgcaacattttggactta 54506079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 354
Target Start/End: Original strand, 22445923 - 22445969
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggactta 354  Q
    ||||||||||||||||||| |||||| ||| |||||| |||||||||    
T  22445923 tgatcaatagtaattcatccagtaatacttgcaacattttggactta 22445969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 313 - 355
Target Start/End: Original strand, 53811597 - 53811639
Alignment:
Q  313 aatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||||||| ||||| | |||||||||||||||||    
T  53811597 aatagtaattcatctaggaatgcctgcaacatcttggacttac 53811639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 310 - 355
Target Start/End: Complemental strand, 21193923 - 21193878
Alignment:
Q  310 atcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||| |||||||| || |||||||||| ||||||    
T  21193923 atcaatagtaattcatttagtaatggttgcaacatcttgaacttac 21193878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 6e-16; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 18494157 - 18494204
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||    
T  18494157 tgatcaatagcaattcatctagtaatgcttacaacatcttggacttac 18494204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 41961167 - 41961120
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  41961167 tgatcaatagtaattcatctagtaatgcttgcaacatcttggacttac 41961120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 308 - 354
Target Start/End: Complemental strand, 26357904 - 26357858
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggactta 354  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||    
T  26357904 tgatcaatagtaattcatctagtaatgcttgcaacatcttggactta 26357858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 4478692 - 4478645
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||    
T  4478692 tgatcaatagcaattcatctagtaatgcttgcaacatcttggacttac 4478645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 5881856 - 5881809
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||    
T  5881856 tgatcaatagtaattcatctagtaatgcttgcaacatcttagacttac 5881809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 7006814 - 7006861
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||    
T  7006814 tgatcaatagaaattcatctagtaatgcttgcaacatcttggacttac 7006861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 19289199 - 19289246
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||    
T  19289199 tgatcaatagtaattcatctagtaatgcttgcaatatcttggacttac 19289246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 27349824 - 27349871
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||    
T  27349824 tgatcaatagtaattcatctagtaatgcttgcaacatcttagacttac 27349871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 33709108 - 33709155
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||    
T  33709108 tgatcaatagtaattcatctagtaatgcttgcaacatcttggatttac 33709155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 351
Target Start/End: Complemental strand, 35959219 - 35959176
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggac 351  Q
    |||||||||||||||||||||||||||||| |||||||||||||    
T  35959219 tgatcaatagtaattcatctagtaatgcttgcaacatcttggac 35959176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 308 - 354
Target Start/End: Complemental strand, 19314174 - 19314128
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggactta 354  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||    
T  19314174 tgatcaatagtaattcatctagtaatgcttgcaacatcttagactta 19314128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 310 - 355
Target Start/End: Original strand, 2325256 - 2325301
Alignment:
Q  310 atcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||    
T  2325256 atcaatagtaattcatctagtaatgcttgcaacatcttggatttac 2325301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 308 - 353
Target Start/End: Original strand, 19424518 - 19424563
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggactt 353  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||    
T  19424518 tgatcaatagtaattcatctagtaatgcttgcaacatcttagactt 19424563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 11366256 - 11366304
Alignment:
Q  308 tgatcaatagta-attcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||||    
T  11366256 tgatcaatagtatattcatctagtaatgcttgcaacatcttggacttac 11366304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 308 - 348
Target Start/End: Original strand, 19500791 - 19500831
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttg 348  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  19500791 tgatcaatagtaattcatctagtaatgcttgcaacatcttg 19500831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 4167249 - 4167202
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||| |||||||||||||| |||||||||| |||||||||||||||||    
T  4167249 tgattaatagtaattcatccagtaatgcttgcaacatcttggacttac 4167202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 4763958 - 4763911
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||||||| |||||||||||| ||| |||||||||||||    
T  4763958 tgatcaatagtaattcaactagtaatgcttgcaatatcttggacttac 4763911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 31862179 - 31862132
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||  ||||| |||||||||||||    
T  31862179 tgatcaatagtaattcatctagtaatgtctacaatatcttggacttac 31862132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 33660253 - 33660300
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| ||||||||  |||||||    
T  33660253 tgatcaatagtaattcatctagtaatgcttgcaacatctcagacttac 33660300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 37906037 - 37905990
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||||||||| |||||| ||| |||||||||||||||||    
T  37906037 tgatcaatagtaattcatccagtaattcttgcaacatcttggacttac 37905990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 41465828 - 41465781
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||| |||||||| || |||||||||||||||||    
T  41465828 tgatcaatagtaattcatatagtaatgtttgcaacatcttggacttac 41465781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 43648121 - 43648168
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||||||||||||||||| || | |||||||||||||||    
T  43648121 tgatcaatagtaattcatctagtaatgtttgcgacatcttggacttac 43648168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 308 - 354
Target Start/End: Original strand, 43770724 - 43770770
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggactta 354  Q
    |||||||||| ||||||||||||||||||| |||||||||| |||||    
T  43770724 tgatcaatagaaattcatctagtaatgcttgcaacatcttgaactta 43770770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 3177266 - 3177219
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||| |||||||||||||||||||||||||  || |||||||||||||    
T  3177266 tgataaatagtaattcatctagtaatgcttgtaatatcttggacttac 3177219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 13711786 - 13711739
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||| || || ||||||||| |||||||    
T  13711786 tgatcaatagtaattcatctagtattgtttgcaacatcttagacttac 13711739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 347
Target Start/End: Original strand, 31570610 - 31570649
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatctt 347  Q
    |||||||||||||||||||||| ||||||| |||||||||    
T  31570610 tgatcaatagtaattcatctagcaatgcttgcaacatctt 31570649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 310 - 353
Target Start/End: Original strand, 33550865 - 33550908
Alignment:
Q  310 atcaatagtaattcatctagtaatgcttacaacatcttggactt 353  Q
    ||||||||| |||||||||||||||||| |||||| ||||||||    
T  33550865 atcaatagttattcatctagtaatgcttgcaacatattggactt 33550908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 41051176 - 41051223
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||  ||||||||||| |||||||||||||||||| ||||||    
T  41051176 tgatcaataacaattcatctagcaatgcttacaacatcttgaacttac 41051223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 44286276 - 44286229
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||  ||||||| ||||||||| |||||||    
T  44286276 tgatcaatagtaattcatctaacaatgcttgcaacatcttagacttac 44286229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 354
Target Start/End: Original strand, 4263952 - 4263998
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggactta 354  Q
    ||||||||| || ||||||||||||||||| |||||||||| |||||    
T  4263952 tgatcaatattatttcatctagtaatgcttgcaacatcttgaactta 4263998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 354
Target Start/End: Original strand, 41463466 - 41463512
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggactta 354  Q
    ||||||||||||||| ||||| ||||| |||||||||||| ||||||    
T  41463466 tgatcaatagtaatttatctattaatgtttacaacatcttagactta 41463512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 6e-16; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 2960071 - 2960024
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  2960071 tgatcaatagtaattcatctagtaatgcttgcaacatcttggacttac 2960024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 11742221 - 11742268
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  11742221 tgatcaatagtaattcatctagtaatgcttgcaacatcttggacttac 11742268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 14758355 - 14758308
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  14758355 tgatcaatagtaattcatctagtaatgcttgcaacatcttggacttac 14758308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 27227338 - 27227385
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  27227338 tgatcaatagtaattcatctagtaatgcttgcaacatcttggacttac 27227385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 27532834 - 27532881
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  27532834 tgatcaatagtaattcatctagtaatgcttgcaacatcttggacttac 27532881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 51129182 - 51129135
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  51129182 tgatcaatagtaattcatctagtaatgcttgcaacatcttggacttac 51129135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 308 - 354
Target Start/End: Complemental strand, 3535246 - 3535200
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggactta 354  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||    
T  3535246 tgatcaatagtaattcatctagtaatgcttgcaacatcttggactta 3535200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 308 - 354
Target Start/End: Original strand, 30326805 - 30326851
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggactta 354  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||    
T  30326805 tgatcaatagtaattcatctagtaatgcttgcaacatcttggactta 30326851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 310 - 355
Target Start/End: Complemental strand, 30254744 - 30254699
Alignment:
Q  310 atcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  30254744 atcaatagtaattcatctagtaatgcttgcaacatcttggacttac 30254699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 238366 - 238413
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||    
T  238366 tgattaatagtaattcatctagtaatgcttgcaacatcttggacttac 238413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 1547594 - 1547547
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||    
T  1547594 tgatcaatggtaattcatctagtaatgcttgcaacatcttggacttac 1547547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 3309476 - 3309429
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||    
T  3309476 tgatcaatagtaattcatctagtaatgcttgcaatatcttggacttac 3309429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 10923050 - 10923003
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||    
T  10923050 tgatcaatagtaattcatctagtaatgcttgcaacattttggacttac 10923003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 16415969 - 16415922
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||    
T  16415969 tgatcaatagtaattcatctaataatgcttgcaacatcttggacttac 16415922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 18422974 - 18422927
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||    
T  18422974 tgatcaatagtaattcatctagcaatgcttgcaacatcttggacttac 18422927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 25160955 - 25160908
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||    
T  25160955 tgatcaatagtaattcatatagtaatgcttgcaacatcttggacttac 25160908  T

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Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 28564636 - 28564683
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||    
T  28564636 tgatcaatagtaattcatctagtaatgtttgcaacatcttggacttac 28564683  T

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Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 32216378 - 32216331
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||    
T  32216378 tgatcaatagtaattcatctaataatgcttgcaacatcttggacttac 32216331  T

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Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 37451608 - 37451561
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||    
T  37451608 tgatcaatagtaattcatctagtaatgtttgcaacatcttggacttac 37451561  T

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Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 40885136 - 40885089
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||    
T  40885136 tgatcaatagtaattcatctagtaatgtttgcaacatcttggacttac 40885089  T

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Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 310 - 355
Target Start/End: Complemental strand, 15383254 - 15383209
Alignment:
Q  310 atcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||    
T  15383254 atcaatagtaattcatctagtaatgcttgcaacatcttggatttac 15383209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 310 - 355
Target Start/End: Original strand, 27267055 - 27267100
Alignment:
Q  310 atcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||    
T  27267055 atcaatagtaattcatctagtaatgcttgcaacatcttagacttac 27267100  T

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Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 308 - 356
Target Start/End: Original strand, 9902907 - 9902955
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttact 356  Q
    |||||||||||||||||||||||| ||||| || |||||||||||||||    
T  9902907 tgatcaatagtaattcatctagtagtgcttgcagcatcttggacttact 9902955  T

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Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 311 - 355
Target Start/End: Original strand, 10181863 - 10181907
Alignment:
Q  311 tcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||    
T  10181863 tcaatagtaattcatctagtaatgcttgcaacattttggacttac 10181907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 19899621 - 19899669
Alignment:
Q  308 tgatcaatagta-attcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||||    
T  19899621 tgatcaatagtatattcatctagtaatgcttgcaacatcttggacttac 19899669  T

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Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 23999671 - 23999623
Alignment:
Q  308 tgatcaatagta-attcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||||    
T  23999671 tgatcaatagtatattcatctagtaatgcttgcaacatcttggacttac 23999623  T

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Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 311 - 351
Target Start/End: Complemental strand, 32267354 - 32267314
Alignment:
Q  311 tcaatagtaattcatctagtaatgcttacaacatcttggac 351  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  32267354 tcaatagtaattcatctagtaatgcttgcaacatcttggac 32267314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 311 - 355
Target Start/End: Original strand, 37618757 - 37618801
Alignment:
Q  311 tcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||| |||||||||||||||||||| |||||||||||||||||    
T  37618757 tcaatactaattcatctagtaatgcttgcaacatcttggacttac 37618801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 4330604 - 4330557
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||| ||||||||||||||||||||| |||||| ||||||||||    
T  4330604 tgatcaattgtaattcatctagtaatgcttgcaacatattggacttac 4330557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 8222450 - 8222404
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||    
T  8222450 tgatcaata-taattcatctagtaatgcttgcaacatcttggacttac 8222404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 15168419 - 15168372
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||||||||||| |||||||| |||||||||| ||||||    
T  15168419 tgatcaatagtaattcatctaataatgcttgcaacatcttgtacttac 15168372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 27563758 - 27563805
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||| |||||||||||||||| ||| |||||||||||||||||    
T  27563758 tgatcaatattaattcatctagtaatacttgcaacatcttggacttac 27563805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 28769976 - 28769929
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||| |||| || |||||||||||||||||    
T  28769976 tgatcaatagtaattcatctagcaatgtttgcaacatcttggacttac 28769929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 34012235 - 34012282
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||| ||||||||||| |||||||||| ||||||    
T  34012235 tgatcaatagtaattcatatagtaatgcttgcaacatcttgaacttac 34012282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 38823537 - 38823490
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| |||||| || |||||||    
T  38823537 tgatcaatagtaattcatctagtaatgcttgcaacattttagacttac 38823490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 39393707 - 39393660
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||||||||||||||||| || |||||||||||| ||||    
T  39393707 tgatcaatagtaattcatctagtaatgtttgcaacatcttggatttac 39393660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 47279512 - 47279465
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||||||||||| ||||| || |||||||||||||||||    
T  47279512 tgatcaatagtaattcatctaataatgtttgcaacatcttggacttac 47279465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 47682347 - 47682394
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||| ||||||||||| |||||||||||| ||||    
T  47682347 tgatcaatagtaattcatttagtaatgcttgcaacatcttggatttac 47682394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 48353865 - 48353818
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||| |||||||||||||||||||| ||| |||||||||||||    
T  48353865 tgatcaataataattcatctagtaatgcttgcaatatcttggacttac 48353818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 308 - 354
Target Start/End: Complemental strand, 21289923 - 21289877
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggactta 354  Q
    ||||||||| ||||||||||||||||| || ||||||||||||||||    
T  21289923 tgatcaataataattcatctagtaatgtttgcaacatcttggactta 21289877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 46931733 - 46931685
Alignment:
Q  308 tgatcaatagta-attcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||| || |||||||||||||||||| |||||||||||||||||    
T  46931733 tgatcaataatatattcatctagtaatgcttgcaacatcttggacttac 46931685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 7078916 - 7078963
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||||||||||||||||| || ||| ||||| |||||||    
T  7078916 tgatcaatagtaattcatctagtaatgtttgcaatatcttagacttac 7078963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 41926479 - 41926433
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||||||||||||||||||||  || |||||||||||||    
T  41926479 tgatcaatagtaattcatctagtaatgctt-gaatatcttggacttac 41926433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 42721359 - 42721312
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||||| ||||||||||  || |||||||||||||||||    
T  42721359 tgatcaatagtaattaatctagtaataattgcaacatcttggacttac 42721312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 27763163 - 27763211
Alignment:
Q  308 tgatcaatagta-attcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||| ||| |||||||||||||| |||||||||| ||||||    
T  27763163 tgatcaatagtatatttatctagtaatgcttgcaacatcttgaacttac 27763211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 12236 - 12189
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||    
T  12236 tgatcaatagtaattcatctagtaatgcttgcaacatcttagacttac 12189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 355
Target Start/End: Complemental strand, 44283 - 44236
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||||||||  |||||||||| ||||| |||||||||||    
T  44283 tgatcaatagtaattcattcagtaatgcttgcaacaacttggacttac 44236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 154504 - 154551
Alignment:
Q  308 tgatcaatagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||||||||||||||  |||||||||| ||||| |||||||||||    
T  154504 tgatcaatagtaattcattcagtaatgcttgcaacaacttggacttac 154551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 355
Target Start/End: Original strand, 145873 - 145921
Alignment:
Q  308 tgatcaatagta-attcatctagtaatgcttacaacatcttggacttac 355  Q
    |||||||| ||| |||||| ||||||||||| |||||||||||||||||    
T  145873 tgatcaattgtatattcatttagtaatgcttgcaacatcttggacttac 145921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 355
Target Start/End: Complemental strand, 101035 - 100995
Alignment:
Q  315 tagtaattcatctagtaatgcttacaacatcttggacttac 355  Q
    ||||||| ||| ||||||||||| |||||||||||||||||    
T  101035 tagtaatgcatttagtaatgcttgcaacatcttggacttac 100995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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