View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19380_low_32 (Length: 436)

Name: NF19380_low_32
Description: NF19380
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19380_low_32
NF19380_low_32
[»] chr8 (39 HSPs)
chr8 (232-350)||(4638829-4638947)
chr8 (80-170)||(4639009-4639099)
chr8 (350-433)||(4631558-4631641)
chr8 (399-436)||(16998996-16999033)
chr8 (398-436)||(17856776-17856814)
chr8 (398-436)||(26016568-26016606)
chr8 (396-433)||(13153925-13153962)
chr8 (395-436)||(26016828-26016869)
chr8 (396-433)||(28572043-28572080)
chr8 (396-433)||(28579636-28579673)
chr8 (396-433)||(34568487-34568524)
chr8 (399-436)||(42885054-42885091)
chr8 (396-436)||(23688165-23688205)
chr8 (398-433)||(8251936-8251971)
chr8 (398-433)||(18754143-18754178)
chr8 (398-433)||(32675760-32675795)
chr8 (398-433)||(38781144-38781179)
chr8 (397-436)||(39029436-39029475)
chr8 (397-432)||(44250857-44250892)
chr8 (399-433)||(51098-51132)
chr8 (399-433)||(1774342-1774376)
chr8 (399-433)||(2944275-2944309)
chr8 (399-433)||(8951431-8951465)
chr8 (398-436)||(23487063-23487101)
chr8 (399-433)||(28192178-28192212)
chr8 (402-436)||(28965507-28965541)
chr8 (398-436)||(28965727-28965765)
chr8 (398-432)||(29279460-29279494)
chr8 (399-433)||(39029178-39029212)
chr8 (398-432)||(40530410-40530444)
chr8 (399-432)||(11798869-11798902)
chr8 (399-432)||(13154192-13154225)
chr8 (399-432)||(17856517-17856550)
chr8 (399-432)||(43653943-43653976)
chr8 (399-436)||(44888680-44888717)
chr8 (396-436)||(2944010-2944050)
chr8 (399-431)||(18455720-18455752)
chr8 (396-436)||(35179597-35179637)
chr8 (404-436)||(40785151-40785183)
[»] chr1 (53 HSPs)
chr1 (232-341)||(48512479-48512601)
chr1 (88-165)||(48512355-48512433)
chr1 (340-396)||(48512636-48512692)
chr1 (398-436)||(38920238-38920276)
chr1 (396-433)||(11741394-11741431)
chr1 (396-433)||(37951952-37951989)
chr1 (396-433)||(39497430-39497467)
chr1 (396-432)||(9202242-9202278)
chr1 (394-433)||(943640-943679)
chr1 (394-433)||(1039384-1039423)
chr1 (394-433)||(1046290-1046329)
chr1 (398-433)||(4102717-4102752)
chr1 (397-436)||(17483731-17483770)
chr1 (398-433)||(45039411-45039446)
chr1 (398-433)||(52431177-52431212)
chr1 (398-432)||(1047991-1048025)
chr1 (394-436)||(1767860-1767902)
chr1 (397-435)||(8104289-8104327)
chr1 (398-436)||(9413325-9413363)
chr1 (398-436)||(14171790-14171828)
chr1 (399-433)||(15811235-15811269)
chr1 (399-433)||(23541979-23542013)
chr1 (398-436)||(28885841-28885879)
chr1 (399-433)||(30290265-30290299)
chr1 (399-433)||(36694854-36694888)
chr1 (399-433)||(36710955-36710989)
chr1 (398-432)||(39362933-39362967)
chr1 (399-433)||(39363197-39363231)
chr1 (398-432)||(39750120-39750154)
chr1 (399-433)||(44649629-44649663)
chr1 (399-433)||(46075870-46075904)
chr1 (399-433)||(49907021-49907055)
chr1 (399-436)||(4280126-4280163)
chr1 (396-433)||(7763752-7763789)
chr1 (396-433)||(16576095-16576132)
chr1 (398-435)||(23530541-23530578)
chr1 (399-432)||(23542243-23542276)
chr1 (399-436)||(27037530-27037567)
chr1 (400-433)||(30289865-30289898)
chr1 (399-436)||(36695115-36695152)
chr1 (399-436)||(36711216-36711253)
chr1 (399-436)||(38613736-38613773)
chr1 (399-432)||(39497697-39497730)
chr1 (396-433)||(41855476-41855513)
chr1 (399-436)||(42872334-42872371)
chr1 (399-432)||(44646535-44646568)
chr1 (399-432)||(44649893-44649926)
chr1 (398-431)||(52601990-52602023)
chr1 (396-436)||(6089732-6089772)
chr1 (396-432)||(30289599-30289635)
chr1 (399-435)||(44646271-44646307)
chr1 (396-432)||(47069052-47069088)
chr1 (397-433)||(50246932-50246968)
[»] chr5 (26 HSPs)
chr5 (397-436)||(9020692-9020731)
chr5 (399-436)||(41687112-41687149)
chr5 (397-433)||(16127257-16127293)
chr5 (398-433)||(6673231-6673266)
chr5 (394-433)||(9828388-9828427)
chr5 (399-434)||(10734525-10734560)
chr5 (398-433)||(14913647-14913682)
chr5 (398-433)||(22527691-22527726)
chr5 (398-433)||(26894876-26894911)
chr5 (398-433)||(34662203-34662238)
chr5 (398-433)||(40004412-40004447)
chr5 (398-432)||(186362-186396)
chr5 (399-433)||(1265949-1265983)
chr5 (398-436)||(7940451-7940489)
chr5 (399-433)||(7951562-7951596)
chr5 (398-436)||(26889592-26889630)
chr5 (399-436)||(4976290-4976327)
chr5 (399-432)||(9828657-9828690)
chr5 (396-433)||(16153258-16153295)
chr5 (398-431)||(16440930-16440963)
chr5 (399-435)||(2106831-2106867)
chr5 (396-432)||(3497537-3497573)
chr5 (397-433)||(8949810-8949846)
chr5 (398-434)||(14435829-14435865)
chr5 (396-436)||(24857553-24857593)
chr5 (396-432)||(41383909-41383945)
[»] chr3 (52 HSPs)
chr3 (394-433)||(37728708-37728747)
chr3 (396-433)||(7181347-7181384)
chr3 (396-433)||(22103932-22103969)
chr3 (396-433)||(51284065-51284102)
chr3 (396-436)||(10015789-10015829)
chr3 (397-433)||(12050395-12050431)
chr3 (396-436)||(19897836-19897876)
chr3 (396-432)||(20862461-20862497)
chr3 (397-433)||(25149125-25149161)
chr3 (396-432)||(26806112-26806148)
chr3 (397-433)||(44543780-44543816)
chr3 (396-432)||(50647681-50647717)
chr3 (394-433)||(4759354-4759393)
chr3 (397-432)||(14428873-14428908)
chr3 (398-433)||(35868086-35868121)
chr3 (397-436)||(42801519-42801558)
chr3 (398-433)||(43868102-43868137)
chr3 (399-433)||(4024052-4024086)
chr3 (399-433)||(9499500-9499534)
chr3 (398-436)||(10044841-10044879)
chr3 (399-433)||(10220933-10220967)
chr3 (399-433)||(14428610-14428644)
chr3 (399-433)||(21756486-21756520)
chr3 (399-433)||(26593768-26593802)
chr3 (398-436)||(28875251-28875289)
chr3 (399-433)||(29719713-29719747)
chr3 (398-436)||(32978740-32978778)
chr3 (398-432)||(33868712-33868746)
chr3 (399-433)||(45252773-45252807)
chr3 (399-433)||(46049989-46050023)
chr3 (399-433)||(46878442-46878476)
chr3 (399-433)||(54604591-54604625)
chr3 (399-432)||(4024315-4024348)
chr3 (399-436)||(4759088-4759125)
chr3 (396-433)||(7051723-7051760)
chr3 (399-432)||(9779979-9780012)
chr3 (399-436)||(9780241-9780278)
chr3 (399-436)||(15996773-15996810)
chr3 (399-432)||(16434977-16435010)
chr3 (396-433)||(26306610-26306647)
chr3 (396-433)||(27687983-27688020)
chr3 (399-432)||(31531415-31531448)
chr3 (399-436)||(32978481-32978518)
chr3 (399-436)||(33360885-33360922)
chr3 (399-432)||(36005768-36005801)
chr3 (396-433)||(41392883-41392920)
chr3 (394-435)||(45513638-45513679)
chr3 (395-436)||(48904263-48904304)
chr3 (399-432)||(52058985-52059018)
chr3 (399-436)||(53361594-53361631)
chr3 (396-433)||(53361858-53361895)
chr3 (397-433)||(24087338-24087374)
[»] scaffold0002 (1 HSPs)
scaffold0002 (398-436)||(355331-355369)
[»] chr7 (28 HSPs)
chr7 (396-433)||(32814430-32814467)
chr7 (396-433)||(33858869-33858906)
chr7 (396-433)||(39871616-39871653)
chr7 (398-433)||(29286040-29286075)
chr7 (398-433)||(36698134-36698169)
chr7 (398-433)||(38858297-38858332)
chr7 (397-436)||(45907243-45907282)
chr7 (399-433)||(19920563-19920597)
chr7 (398-432)||(20075111-20075145)
chr7 (399-433)||(21295151-21295185)
chr7 (399-433)||(26255096-26255130)
chr7 (398-436)||(27813495-27813533)
chr7 (398-432)||(28060981-28061015)
chr7 (399-433)||(32872378-32872412)
chr7 (399-433)||(39197718-39197752)
chr7 (399-433)||(40300230-40300264)
chr7 (399-433)||(41003157-41003191)
chr7 (399-433)||(41026099-41026133)
chr7 (399-433)||(41252364-41252398)
chr7 (399-433)||(48521029-48521063)
chr7 (399-436)||(18113166-18113203)
chr7 (399-436)||(32118163-32118200)
chr7 (396-433)||(34012520-34012557)
chr7 (399-436)||(35569651-35569688)
chr7 (399-432)||(38428411-38428444)
chr7 (399-436)||(44510343-44510380)
chr7 (397-433)||(33381576-33381612)
chr7 (397-433)||(36646640-36646676)
[»] chr6 (25 HSPs)
chr6 (399-436)||(9038642-9038679)
chr6 (399-436)||(11847832-11847869)
chr6 (396-436)||(12144038-12144078)
chr6 (396-436)||(13321326-13321366)
chr6 (398-433)||(4844399-4844434)
chr6 (397-436)||(16122514-16122553)
chr6 (398-433)||(30248646-30248681)
chr6 (399-433)||(231108-231142)
chr6 (399-433)||(8743188-8743222)
chr6 (398-436)||(13647867-13647905)
chr6 (399-433)||(13648132-13648166)
chr6 (395-433)||(19097804-19097842)
chr6 (399-433)||(23398142-23398176)
chr6 (399-433)||(34301835-34301869)
chr6 (398-432)||(34741730-34741764)
chr6 (399-432)||(9388529-9388562)
chr6 (397-434)||(16272970-16273007)
chr6 (396-433)||(25045646-25045683)
chr6 (399-436)||(31091445-31091482)
chr6 (396-436)||(1147005-1147045)
chr6 (399-435)||(1730102-1730138)
chr6 (397-433)||(15498627-15498663)
chr6 (396-436)||(15498888-15498928)
chr6 (397-433)||(25197150-25197186)
chr6 (397-433)||(34915546-34915582)
[»] chr4 (41 HSPs)
chr4 (399-436)||(20391437-20391474)
chr4 (399-436)||(35675920-35675957)
chr4 (397-433)||(36391852-36391888)
chr4 (397-433)||(45742809-45742845)
chr4 (396-436)||(52181186-52181226)
chr4 (398-433)||(4035824-4035859)
chr4 (397-432)||(20747434-20747469)
chr4 (398-436)||(1028517-1028555)
chr4 (399-433)||(5375560-5375594)
chr4 (399-433)||(5743662-5743696)
chr4 (399-433)||(9328243-9328277)
chr4 (398-436)||(18872716-18872754)
chr4 (399-433)||(26626005-26626039)
chr4 (399-433)||(30771528-30771562)
chr4 (399-433)||(32032996-32033030)
chr4 (399-433)||(33413518-33413552)
chr4 (399-433)||(34273222-34273256)
chr4 (399-433)||(44294789-44294823)
chr4 (399-433)||(47806860-47806894)
chr4 (399-433)||(52977982-52978016)
chr4 (399-432)||(4036089-4036122)
chr4 (399-432)||(4549629-4549662)
chr4 (399-436)||(7698469-7698506)
chr4 (396-433)||(17610023-17610060)
chr4 (399-436)||(26625743-26625780)
chr4 (399-432)||(29014064-29014097)
chr4 (399-436)||(37776737-37776774)
chr4 (399-436)||(39670986-39671023)
chr4 (396-433)||(52870641-52870678)
chr4 (399-432)||(55631999-55632032)
chr4 (397-433)||(375422-375458)
chr4 (397-433)||(2615948-2615984)
chr4 (397-433)||(6807427-6807463)
chr4 (396-436)||(26889899-26889939)
chr4 (396-436)||(30050084-30050124)
chr4 (397-433)||(45097168-45097204)
chr4 (397-433)||(48030311-48030347)
chr4 (398-434)||(49228720-49228756)
chr4 (397-433)||(49793089-49793125)
chr4 (399-431)||(53277190-53277222)
chr4 (397-433)||(56432516-56432552)
[»] chr2 (39 HSPs)
chr2 (399-436)||(34113786-34113823)
chr2 (397-433)||(11201681-11201717)
chr2 (397-433)||(34883851-34883887)
chr2 (398-433)||(8841660-8841695)
chr2 (397-436)||(12890208-12890247)
chr2 (398-433)||(20252209-20252244)
chr2 (398-433)||(34062668-34062703)
chr2 (398-433)||(40607701-40607736)
chr2 (398-433)||(41450515-41450550)
chr2 (401-436)||(42629373-42629408)
chr2 (399-433)||(2438225-2438259)
chr2 (394-436)||(3095294-3095336)
chr2 (399-433)||(7491844-7491878)
chr2 (399-433)||(8716895-8716929)
chr2 (398-436)||(9701069-9701107)
chr2 (398-436)||(15227889-15227927)
chr2 (398-432)||(16108214-16108248)
chr2 (399-433)||(17408297-17408331)
chr2 (397-431)||(22182929-22182963)
chr2 (399-433)||(23788969-23789003)
chr2 (399-433)||(27560206-27560240)
chr2 (399-433)||(36131031-36131065)
chr2 (398-432)||(39833738-39833772)
chr2 (398-436)||(41422511-41422549)
chr2 (398-436)||(41494622-41494660)
chr2 (399-436)||(2200240-2200277)
chr2 (399-432)||(2438489-2438522)
chr2 (396-433)||(5664635-5664672)
chr2 (399-432)||(7492108-7492141)
chr2 (396-433)||(15228152-15228189)
chr2 (399-436)||(18374704-18374741)
chr2 (399-432)||(22897655-22897688)
chr2 (399-436)||(24345678-24345715)
chr2 (399-436)||(32120944-32120981)
chr2 (399-432)||(45474351-45474384)
chr2 (395-431)||(8841393-8841429)
chr2 (397-433)||(22897389-22897425)
chr2 (397-433)||(25624731-25624767)
chr2 (397-433)||(44573885-44573921)
[»] scaffold0008 (1 HSPs)
scaffold0008 (397-433)||(259125-259161)
[»] scaffold0122 (1 HSPs)
scaffold0122 (398-433)||(12064-12099)
[»] scaffold0029 (1 HSPs)
scaffold0029 (398-433)||(51685-51720)
[»] scaffold0020 (1 HSPs)
scaffold0020 (397-436)||(164212-164251)
[»] scaffold0012 (1 HSPs)
scaffold0012 (398-433)||(47639-47674)
[»] scaffold0604 (2 HSPs)
scaffold0604 (399-433)||(3785-3819)
scaffold0604 (399-436)||(3525-3562)
[»] scaffold0308 (1 HSPs)
scaffold0308 (399-433)||(14351-14385)
[»] scaffold0163 (1 HSPs)
scaffold0163 (397-435)||(1447-1485)
[»] scaffold0368 (1 HSPs)
scaffold0368 (399-436)||(8218-8255)
[»] scaffold0240 (1 HSPs)
scaffold0240 (399-436)||(18756-18793)
[»] scaffold0025 (2 HSPs)
scaffold0025 (399-432)||(65378-65411)
scaffold0025 (397-433)||(65640-65676)
[»] scaffold0237 (1 HSPs)
scaffold0237 (396-432)||(6613-6649)
[»] scaffold0009 (1 HSPs)
scaffold0009 (396-436)||(246453-246493)


Alignment Details
Target: chr8 (Bit Score: 119; Significance: 1e-60; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 232 - 350
Target Start/End: Complemental strand, 4638947 - 4638829
Alignment:
Q  232 catgtgcagactgatacagcttcggtgcttcacgaggctactggttacatgatcaagttcaggttctgtgctctccatgcctgcaaccttgacaagttca 331  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4638947 catgtgcagactgatacagcttcggtgcttcacgaggctactggttacatgatcaagttcaggttctgtgctctccatgcctgcaaccttgacaagttca 4638848  T
Q  332 atttcaaaatattcttcat 350  Q
    |||||||||||||||||||    
T  4638847 atttcaaaatattcttcat 4638829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 80 - 170
Target Start/End: Complemental strand, 4639099 - 4639009
Alignment:
Q  80 gaagctttgtgaacgaattgcagcgttacaacatgtttcaccctttggcaaggtaaattagtagtatattttccagtgttattaaaattat 170  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4639099 gaagcttggtgaacgaattgcagcgttacaacatgtttcaccctttggcaaggtaaattagtagtatattttccagtgttattaaaattat 4639009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 350 - 433
Target Start/End: Complemental strand, 4631641 - 4631558
Alignment:
Q  350 ttattctatgataatgttatttatggtcaaaggatggtcaaatcagtaatactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||| ||||||    
T  4631641 ttattctatgataatgttatttatggtcaaaggatgatcaaatcagtaatactccatccgtccctaattataagaccattttga 4631558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 399 - 436
Target Start/End: Original strand, 16998996 - 16999033
Alignment:
Q  399 tactccctccgtccataattataagacccttttgaaaa 436  Q
    ||||||||||||||||||||||||||||||||||||||    
T  16998996 tactccctccgtccataattataagacccttttgaaaa 16999033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 436
Target Start/End: Complemental strand, 17856814 - 17856776
Alignment:
Q  398 atactccctccgtccataattataagacccttttgaaaa 436  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  17856814 atactccctccgtccctaattataagacccttttgaaaa 17856776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 436
Target Start/End: Original strand, 26016568 - 26016606
Alignment:
Q  398 atactccctccgtccataattataagacccttttgaaaa 436  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  26016568 atactccctccgtccctaattataagacccttttgaaaa 26016606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 396 - 433
Target Start/End: Original strand, 13153925 - 13153962
Alignment:
Q  396 taatactccctccgtccataattataagacccttttga 433  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  13153925 taatactccctccgtccctaattataagacccttttga 13153962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 395 - 436
Target Start/End: Complemental strand, 26016869 - 26016828
Alignment:
Q  395 gtaatactccctccgtccataattataagacccttttgaaaa 436  Q
    |||||||||||||||||| |||||||| ||||||||||||||    
T  26016869 gtaatactccctccgtccctaattataggacccttttgaaaa 26016828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 396 - 433
Target Start/End: Original strand, 28572043 - 28572080
Alignment:
Q  396 taatactccctccgtccataattataagacccttttga 433  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  28572043 taatactccctccgtccctaattataagacccttttga 28572080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 396 - 433
Target Start/End: Original strand, 28579636 - 28579673
Alignment:
Q  396 taatactccctccgtccataattataagacccttttga 433  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  28579636 taatactccctccgtccctaattataagacccttttga 28579673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 396 - 433
Target Start/End: Original strand, 34568487 - 34568524
Alignment:
Q  396 taatactccctccgtccataattataagacccttttga 433  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  34568487 taatactccctccgtccctaattataagacccttttga 34568524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 399 - 436
Target Start/End: Original strand, 42885054 - 42885091
Alignment:
Q  399 tactccctccgtccataattataagacccttttgaaaa 436  Q
    |||||||||||||| |||||||||||||||||||||||    
T  42885054 tactccctccgtccctaattataagacccttttgaaaa 42885091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 396 - 436
Target Start/End: Complemental strand, 23688205 - 23688165
Alignment:
Q  396 taatactccctccgtccataattataagacccttttgaaaa 436  Q
    ||||||| ||||||||| |||||||||||||||||||||||    
T  23688205 taatactacctccgtccctaattataagacccttttgaaaa 23688165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 433
Target Start/End: Complemental strand, 8251971 - 8251936
Alignment:
Q  398 atactccctccgtccataattataagacccttttga 433  Q
    ||||||||||||||| ||||||||||||||||||||    
T  8251971 atactccctccgtccctaattataagacccttttga 8251936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 433
Target Start/End: Original strand, 18754143 - 18754178
Alignment:
Q  398 atactccctccgtccataattataagacccttttga 433  Q
    ||||||||||||||| ||||||||||||||||||||    
T  18754143 atactccctccgtccctaattataagacccttttga 18754178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 433
Target Start/End: Complemental strand, 32675795 - 32675760
Alignment:
Q  398 atactccctccgtccataattataagacccttttga 433  Q
    ||||||||||||||| ||||||||||||||||||||    
T  32675795 atactccctccgtccctaattataagacccttttga 32675760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 433
Target Start/End: Complemental strand, 38781179 - 38781144
Alignment:
Q  398 atactccctccgtccataattataagacccttttga 433  Q
    ||||| ||||||||||||||||||||||||||||||    
T  38781179 atactacctccgtccataattataagacccttttga 38781144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 436
Target Start/End: Complemental strand, 39029475 - 39029436
Alignment:
Q  397 aatactccctccgtccataattataagacccttttgaaaa 436  Q
    |||||||||||||||| |||||||| ||||||||||||||    
T  39029475 aatactccctccgtccctaattataggacccttttgaaaa 39029436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 432
Target Start/End: Original strand, 44250857 - 44250892
Alignment:
Q  397 aatactccctccgtccataattataagacccttttg 432  Q
    |||||||||||||||| |||||||||||||||||||    
T  44250857 aatactccctccgtccctaattataagacccttttg 44250892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Complemental strand, 51132 - 51098
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  51132 tactccctccgtccctaattataagacccttttga 51098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 1774342 - 1774376
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  1774342 tactccctccgtccctaattataagacccttttga 1774376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Complemental strand, 2944309 - 2944275
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  2944309 tactccctccgtccctaattataagacccttttga 2944275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Complemental strand, 8951465 - 8951431
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  8951465 tactccctccgtccctaattataagacccttttga 8951431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 436
Target Start/End: Original strand, 23487063 - 23487101
Alignment:
Q  398 atactccctccgtccataattataagacccttttgaaaa 436  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  23487063 atactacctccgtccctaattataagacccttttgaaaa 23487101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Complemental strand, 28192212 - 28192178
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  28192212 tactccctccgtccctaattataagacccttttga 28192178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 402 - 436
Target Start/End: Original strand, 28965507 - 28965541
Alignment:
Q  402 tccctccgtccataattataagacccttttgaaaa 436  Q
    ||||||||||||||||||||| |||||||||||||    
T  28965507 tccctccgtccataattataaaacccttttgaaaa 28965541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 436
Target Start/End: Complemental strand, 28965765 - 28965727
Alignment:
Q  398 atactccctccgtccataattataagacccttttgaaaa 436  Q
    |||||| |||||||| |||||||||||||||||||||||    
T  28965765 atactctctccgtccctaattataagacccttttgaaaa 28965727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 432
Target Start/End: Complemental strand, 29279494 - 29279460
Alignment:
Q  398 atactccctccgtccataattataagacccttttg 432  Q
    ||||||||||||||| |||||||||||||||||||    
T  29279494 atactccctccgtccctaattataagacccttttg 29279460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 39029178 - 39029212
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  39029178 tactccctccgtccctaattataagacccttttga 39029212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 432
Target Start/End: Complemental strand, 40530444 - 40530410
Alignment:
Q  398 atactccctccgtccataattataagacccttttg 432  Q
    ||||||||||||||| |||||||||||||||||||    
T  40530444 atactccctccgtccctaattataagacccttttg 40530410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 432
Target Start/End: Complemental strand, 11798902 - 11798869
Alignment:
Q  399 tactccctccgtccataattataagacccttttg 432  Q
    |||||||||||||| |||||||||||||||||||    
T  11798902 tactccctccgtccctaattataagacccttttg 11798869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 432
Target Start/End: Complemental strand, 13154225 - 13154192
Alignment:
Q  399 tactccctccgtccataattataagacccttttg 432  Q
    |||||||||||||| |||||||||||||||||||    
T  13154225 tactccctccgtccctaattataagacccttttg 13154192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 432
Target Start/End: Original strand, 17856517 - 17856550
Alignment:
Q  399 tactccctccgtccataattataagacccttttg 432  Q
    |||||||||||||| |||||||||||||||||||    
T  17856517 tactccctccgtccttaattataagacccttttg 17856550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 432
Target Start/End: Original strand, 43653943 - 43653976
Alignment:
Q  399 tactccctccgtccataattataagacccttttg 432  Q
    |||||||||||||| |||||||||||||||||||    
T  43653943 tactccctccgtccctaattataagacccttttg 43653976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Original strand, 44888680 - 44888717
Alignment:
Q  399 tactccctccgtccataattataagacccttttgaaaa 436  Q
    |||| ||||||||| |||||||||||||||||||||||    
T  44888680 tactacctccgtccctaattataagacccttttgaaaa 44888717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 436
Target Start/End: Original strand, 2944010 - 2944050
Alignment:
Q  396 taatactccctccgtccataattataagacccttttgaaaa 436  Q
    ||||||||||||||||| |||||||| ||||||||| ||||    
T  2944010 taatactccctccgtccctaattataggacccttttaaaaa 2944050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 431
Target Start/End: Original strand, 18455720 - 18455752
Alignment:
Q  399 tactccctccgtccataattataagaccctttt 431  Q
    |||||||||||||| ||||||||||||||||||    
T  18455720 tactccctccgtccctaattataagaccctttt 18455752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 436
Target Start/End: Original strand, 35179597 - 35179637
Alignment:
Q  396 taatactccctccgtccataattataagacccttttgaaaa 436  Q
    ||||||| ||||||||| |||||||||||| ||||||||||    
T  35179597 taatactacctccgtccctaattataagactcttttgaaaa 35179637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 404 - 436
Target Start/End: Complemental strand, 40785183 - 40785151
Alignment:
Q  404 cctccgtccataattataagacccttttgaaaa 436  Q
    ||||||||| |||||||||||||||||||||||    
T  40785183 cctccgtccctaattataagacccttttgaaaa 40785151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 1e-29; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 232 - 341
Target Start/End: Original strand, 48512479 - 48512601
Alignment:
Q  232 catgtgcagactgatacagcttcggtgcttcacgaggctactggttac-------------atgatcaagttcaggttctgtgctctccatgcctgcaac 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||             |||||||||||||||||||||||||||||| | ||||||    
T  48512479 catgtgcagactgatacagcttcggtgcttcacgaggctactggttacataagattcttacatgatcaagttcaggttctgtgctctccatacttgcaac 48512578  T
Q  319 cttgacaagttcaatttcaaaat 341  Q
    ||| |||||||||||||||||||    
T  48512579 cttcacaagttcaatttcaaaat 48512601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 88 - 165
Target Start/End: Original strand, 48512355 - 48512433
Alignment:
Q  88 gtgaacgaattgcagcgttacaaca---tgtttcaccctttggcaaggtaaattagtagtatattttccagtgttattaaa 165  Q
    |||||||||||||||||||||||||   ||||||||||||||||||||||||||||   ||||||||||||||||||||||    
T  48512355 gtgaacgaattgcagcgttacaacaacttgtttcaccctttggcaaggtaaattag--atatattttccagtgttattaaa 48512433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 340 - 396
Target Start/End: Original strand, 48512636 - 48512692
Alignment:
Q  340 atattcttcattattctatgataatgttatttatggtcaaaggatggtcaaatcagt 396  Q
    ||||||||| | |||||||| ||||||||||||||||||| ||||||||||||||||    
T  48512636 atattcttcgtaattctatgttaatgttatttatggtcaatggatggtcaaatcagt 48512692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 436
Target Start/End: Original strand, 38920238 - 38920276
Alignment:
Q  398 atactccctccgtccataattataagacccttttgaaaa 436  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  38920238 atactccctccgtccctaattataagacccttttgaaaa 38920276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 396 - 433
Target Start/End: Original strand, 11741394 - 11741431
Alignment:
Q  396 taatactccctccgtccataattataagacccttttga 433  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  11741394 taatactccctccgtccctaattataagacccttttga 11741431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 396 - 433
Target Start/End: Complemental strand, 37951989 - 37951952
Alignment:
Q  396 taatactccctccgtccataattataagacccttttga 433  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  37951989 taatactccctccgtccctaattataagacccttttga 37951952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 396 - 433
Target Start/End: Original strand, 39497430 - 39497467
Alignment:
Q  396 taatactccctccgtccataattataagacccttttga 433  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  39497430 taatactccctccgtccctaattataagacccttttga 39497467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 396 - 432
Target Start/End: Original strand, 9202242 - 9202278
Alignment:
Q  396 taatactccctccgtccataattataagacccttttg 432  Q
    ||||||||||||||||| |||||||||||||||||||    
T  9202242 taatactccctccgtccctaattataagacccttttg 9202278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 433
Target Start/End: Complemental strand, 943679 - 943640
Alignment:
Q  394 agtaatactccctccgtccataattataagacccttttga 433  Q
    |||| |||||||||||||| ||||||||||||||||||||    
T  943679 agtattactccctccgtccctaattataagacccttttga 943640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 433
Target Start/End: Complemental strand, 1039423 - 1039384
Alignment:
Q  394 agtaatactccctccgtccataattataagacccttttga 433  Q
    |||| |||||||||||||| ||||||||||||||||||||    
T  1039423 agtagtactccctccgtccctaattataagacccttttga 1039384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 433
Target Start/End: Complemental strand, 1046329 - 1046290
Alignment:
Q  394 agtaatactccctccgtccataattataagacccttttga 433  Q
    |||| |||||||||||||| ||||||||||||||||||||    
T  1046329 agtagtactccctccgtccctaattataagacccttttga 1046290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 433
Target Start/End: Complemental strand, 4102752 - 4102717
Alignment:
Q  398 atactccctccgtccataattataagacccttttga 433  Q
    ||||||||||||||| ||||||||||||||||||||    
T  4102752 atactccctccgtccctaattataagacccttttga 4102717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 436
Target Start/End: Original strand, 17483731 - 17483770
Alignment:
Q  397 aatactccctccgtccataattataagacccttttgaaaa 436  Q
    |||||| ||||||||| |||||||||||||||||||||||    
T  17483731 aatactacctccgtccctaattataagacccttttgaaaa 17483770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 433
Target Start/End: Original strand, 45039411 - 45039446
Alignment:
Q  398 atactccctccgtccataattataagacccttttga 433  Q
    ||||||||||||||| ||||||||||||||||||||    
T  45039411 atactccctccgtccctaattataagacccttttga 45039446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 433
Target Start/End: Complemental strand, 52431212 - 52431177
Alignment:
Q  398 atactccctccgtccataattataagacccttttga 433  Q
    ||||||||||||||| ||||||||||||||||||||    
T  52431212 atactccctccgtccctaattataagacccttttga 52431177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 432
Target Start/End: Original strand, 1047991 - 1048025
Alignment:
Q  398 atactccctccgtccataattataagacccttttg 432  Q
    ||||||||||||||| |||||||||||||||||||    
T  1047991 atactccctccgtccctaattataagacccttttg 1048025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 394 - 436
Target Start/End: Complemental strand, 1767902 - 1767860
Alignment:
Q  394 agtaatactccctccgtccataattataagacccttttgaaaa 436  Q
    ||||||||| ||| ||||| |||||||||||||||||||||||    
T  1767902 agtaatactaccttcgtccctaattataagacccttttgaaaa 1767860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 435
Target Start/End: Complemental strand, 8104327 - 8104289
Alignment:
Q  397 aatactccctccgtccataattataagacccttttgaaa 435  Q
    |||||||||||||||| |||||||||||||| |||||||    
T  8104327 aatactccctccgtccctaattataagacccctttgaaa 8104289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 436
Target Start/End: Complemental strand, 9413363 - 9413325
Alignment:
Q  398 atactccctccgtccataattataagacccttttgaaaa 436  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  9413363 atactacctccgtccctaattataagacccttttgaaaa 9413325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 436
Target Start/End: Complemental strand, 14171828 - 14171790
Alignment:
Q  398 atactccctccgtccataattataagacccttttgaaaa 436  Q
    ||||||||||||||| |||||||| ||||||||||||||    
T  14171828 atactccctccgtccctaattataggacccttttgaaaa 14171790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Complemental strand, 15811269 - 15811235
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  15811269 tactccctccgtccctaattataagacccttttga 15811235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 23541979 - 23542013
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  23541979 tactccctccgtccctaattataagacccttttga 23542013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 436
Target Start/End: Original strand, 28885841 - 28885879
Alignment:
Q  398 atactccctccgtccataattataagacccttttgaaaa 436  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  28885841 atactacctccgtccctaattataagacccttttgaaaa 28885879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 30290265 - 30290299
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  30290265 tactccctccgtccctaattataagacccttttga 30290299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 36694854 - 36694888
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  36694854 tactccctccgtccctaattataagacccttttga 36694888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 36710955 - 36710989
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  36710955 tactccctccgtccctaattataagacccttttga 36710989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 432
Target Start/End: Original strand, 39362933 - 39362967
Alignment:
Q  398 atactccctccgtccataattataagacccttttg 432  Q
    ||||||||||||||| |||||||||||||||||||    
T  39362933 atactccctccgtccctaattataagacccttttg 39362967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Complemental strand, 39363231 - 39363197
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  39363231 tactccctccgtccctaattataagacccttttga 39363197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 432
Target Start/End: Original strand, 39750120 - 39750154
Alignment:
Q  398 atactccctccgtccataattataagacccttttg 432  Q
    ||||||||||||||| |||||||||||||||||||    
T  39750120 atactccctccgtccctaattataagacccttttg 39750154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 44649629 - 44649663
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  44649629 tactccctccgtccctaattataagacccttttga 44649663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Complemental strand, 46075904 - 46075870
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  46075904 tactccctccgtccctaattataagacccttttga 46075870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 49907021 - 49907055
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  49907021 tactccctccgtccctaattataagacccttttga 49907055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Complemental strand, 4280163 - 4280126
Alignment:
Q  399 tactccctccgtccataattataagacccttttgaaaa 436  Q
    |||| ||||||||| |||||||||||||||||||||||    
T  4280163 tactacctccgtccctaattataagacccttttgaaaa 4280126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 433
Target Start/End: Complemental strand, 7763789 - 7763752
Alignment:
Q  396 taatactccctccgtccataattataagacccttttga 433  Q
    ||||||| ||||||||| ||||||||||||||||||||    
T  7763789 taatactacctccgtccctaattataagacccttttga 7763752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 433
Target Start/End: Complemental strand, 16576132 - 16576095
Alignment:
Q  396 taatactccctccgtccataattataagacccttttga 433  Q
    ||||||||||||||||| |||||||||||| |||||||    
T  16576132 taatactccctccgtccctaattataagactcttttga 16576095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 435
Target Start/End: Original strand, 23530541 - 23530578
Alignment:
Q  398 atactccctccgtccataattataagacccttttgaaa 435  Q
    ||||| ||||||||| ||||||||||||||||||||||    
T  23530541 atactacctccgtccttaattataagacccttttgaaa 23530578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 432
Target Start/End: Complemental strand, 23542276 - 23542243
Alignment:
Q  399 tactccctccgtccataattataagacccttttg 432  Q
    |||||||||||||| |||||||||||||||||||    
T  23542276 tactccctccgtccctaattataagacccttttg 23542243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Complemental strand, 27037567 - 27037530
Alignment:
Q  399 tactccctccgtccataattataagacccttttgaaaa 436  Q
    |||| ||||||||| |||||||||||||||||||||||    
T  27037567 tactacctccgtccctaattataagacccttttgaaaa 27037530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 433
Target Start/End: Complemental strand, 30289898 - 30289865
Alignment:
Q  400 actccctccgtccataattataagacccttttga 433  Q
    ||||||||||||| ||||||||||||||||||||    
T  30289898 actccctccgtccctaattataagacccttttga 30289865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Complemental strand, 36695152 - 36695115
Alignment:
Q  399 tactccctccgtccataattataagacccttttgaaaa 436  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  36695152 tactccctctgtccctaattataagacccttttgaaaa 36695115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Complemental strand, 36711253 - 36711216
Alignment:
Q  399 tactccctccgtccataattataagacccttttgaaaa 436  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  36711253 tactccctctgtccctaattataagacccttttgaaaa 36711216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Complemental strand, 38613773 - 38613736
Alignment:
Q  399 tactccctccgtccataattataagacccttttgaaaa 436  Q
    |||| ||||||||| |||||||||||||||||||||||    
T  38613773 tactacctccgtccctaattataagacccttttgaaaa 38613736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 432
Target Start/End: Complemental strand, 39497730 - 39497697
Alignment:
Q  399 tactccctccgtccataattataagacccttttg 432  Q
    |||||||||||||| |||||||||||||||||||    
T  39497730 tactccctccgtccctaattataagacccttttg 39497697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 433
Target Start/End: Complemental strand, 41855513 - 41855476
Alignment:
Q  396 taatactccctccgtccataattataagacccttttga 433  Q
    ||||||||| ||||||| ||||||||||||||||||||    
T  41855513 taatactccatccgtccctaattataagacccttttga 41855476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Complemental strand, 42872371 - 42872334
Alignment:
Q  399 tactccctccgtccataattataagacccttttgaaaa 436  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  42872371 tactccctccgtccctaattgtaagacccttttgaaaa 42872334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 432
Target Start/End: Complemental strand, 44646568 - 44646535
Alignment:
Q  399 tactccctccgtccataattataagacccttttg 432  Q
    |||||||||||||| |||||||||||||||||||    
T  44646568 tactccctccgtccctaattataagacccttttg 44646535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 432
Target Start/End: Complemental strand, 44649926 - 44649893
Alignment:
Q  399 tactccctccgtccataattataagacccttttg 432  Q
    |||||||||||||| |||||||||||||||||||    
T  44649926 tactccctccgtccctaattataagacccttttg 44649893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 431
Target Start/End: Original strand, 52601990 - 52602023
Alignment:
Q  398 atactccctccgtccataattataagaccctttt 431  Q
    ||||||||||||||| ||||||||||||||||||    
T  52601990 atactccctccgtccctaattataagaccctttt 52602023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 436
Target Start/End: Original strand, 6089732 - 6089772
Alignment:
Q  396 taatactccctccgtccataattataagacccttttgaaaa 436  Q
    ||||||| ||||||||  |||||||||||||||||||||||    
T  6089732 taatactacctccgtctctaattataagacccttttgaaaa 6089772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 432
Target Start/End: Original strand, 30289599 - 30289635
Alignment:
Q  396 taatactccctccgtccataattataagacccttttg 432  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  30289599 taatactccctccgtccctaattataagactcttttg 30289635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 44646271 - 44646307
Alignment:
Q  399 tactccctccgtccataattataagacccttttgaaa 435  Q
    |||||| ||||||| ||||||||||||||||||||||    
T  44646271 tactccttccgtccctaattataagacccttttgaaa 44646307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 432
Target Start/End: Complemental strand, 47069088 - 47069052
Alignment:
Q  396 taatactccctccgtccataattataagacccttttg 432  Q
    ||||||||| ||||||| |||||||||||||||||||    
T  47069088 taatactccatccgtccctaattataagacccttttg 47069052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 433
Target Start/End: Complemental strand, 50246968 - 50246932
Alignment:
Q  397 aatactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||||| ||||||||||| ||||||||    
T  50246968 aatactccctccgtccgtaattataagatccttttga 50246932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000004; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 397 - 436
Target Start/End: Original strand, 9020692 - 9020731
Alignment:
Q  397 aatactccctccgtccataattataagacccttttgaaaa 436  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  9020692 aatactccctccgtccctaattataagacccttttgaaaa 9020731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 399 - 436
Target Start/End: Complemental strand, 41687149 - 41687112
Alignment:
Q  399 tactccctccgtccataattataagacccttttgaaaa 436  Q
    |||| |||||||||||||||||||||||||||||||||    
T  41687149 tactacctccgtccataattataagacccttttgaaaa 41687112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 397 - 433
Target Start/End: Original strand, 16127257 - 16127293
Alignment:
Q  397 aatactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||||| ||||||||||||||||||||    
T  16127257 aatactccctccgtccctaattataagacccttttga 16127293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 433
Target Start/End: Complemental strand, 6673266 - 6673231
Alignment:
Q  398 atactccctccgtccataattataagacccttttga 433  Q
    ||||||||||||||| ||||||||||||||||||||    
T  6673266 atactccctccgtccctaattataagacccttttga 6673231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 433
Target Start/End: Original strand, 9828388 - 9828427
Alignment:
Q  394 agtaatactccctccgtccataattataagacccttttga 433  Q
    |||| |||||||||||||| ||||||||||||||||||||    
T  9828388 agtagtactccctccgtccctaattataagacccttttga 9828427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 434
Target Start/End: Complemental strand, 10734560 - 10734525
Alignment:
Q  399 tactccctccgtccataattataagacccttttgaa 434  Q
    |||||||||||||| |||||||||||||||||||||    
T  10734560 tactccctccgtccctaattataagacccttttgaa 10734525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 433
Target Start/End: Original strand, 14913647 - 14913682
Alignment:
Q  398 atactccctccgtccataattataagacccttttga 433  Q
    ||||||||||||||| ||||||||||||||||||||    
T  14913647 atactccctccgtccctaattataagacccttttga 14913682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 433
Target Start/End: Original strand, 22527691 - 22527726
Alignment:
Q  398 atactccctccgtccataattataagacccttttga 433  Q
    ||||||||||||||| ||||||||||||||||||||    
T  22527691 atactccctccgtccctaattataagacccttttga 22527726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 433
Target Start/End: Complemental strand, 26894911 - 26894876
Alignment:
Q  398 atactccctccgtccataattataagacccttttga 433  Q
    ||||||||||||||| ||||||||||||||||||||    
T  26894911 atactccctccgtccctaattataagacccttttga 26894876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 433
Target Start/End: Original strand, 34662203 - 34662238
Alignment:
Q  398 atactccctccgtccataattataagacccttttga 433  Q
    ||||||||||||||| ||||||||||||||||||||    
T  34662203 atactccctccgtccctaattataagacccttttga 34662238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 433
Target Start/End: Complemental strand, 40004447 - 40004412
Alignment:
Q  398 atactccctccgtccataattataagacccttttga 433  Q
    ||||||||||||||| ||||||||||||||||||||    
T  40004447 atactccctccgtccctaattataagacccttttga 40004412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 432
Target Start/End: Complemental strand, 186396 - 186362
Alignment:
Q  398 atactccctccgtccataattataagacccttttg 432  Q
    ||||||||||||||| |||||||||||||||||||    
T  186396 atactccctccgtccctaattataagacccttttg 186362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 1265949 - 1265983
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  1265949 tactccctccgtccctaattataagacccttttga 1265983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 436
Target Start/End: Original strand, 7940451 - 7940489
Alignment:
Q  398 atactccctccgtccataattataagacccttttgaaaa 436  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  7940451 atactacctccgtccctaattataagacccttttgaaaa 7940489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 7951562 - 7951596
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  7951562 tactccctccgtccctaattataagacccttttga 7951596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 436
Target Start/End: Original strand, 26889592 - 26889630
Alignment:
Q  398 atactccctccgtccataattataagacccttttgaaaa 436  Q
    ||||||||||||||| |||||||| ||||||||||||||    
T  26889592 atactccctccgtccctaattataggacccttttgaaaa 26889630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Complemental strand, 4976327 - 4976290
Alignment:
Q  399 tactccctccgtccataattataagacccttttgaaaa 436  Q
    |||| ||||||||| |||||||||||||||||||||||    
T  4976327 tactacctccgtccctaattataagacccttttgaaaa 4976290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 432
Target Start/End: Complemental strand, 9828690 - 9828657
Alignment:
Q  399 tactccctccgtccataattataagacccttttg 432  Q
    |||||||||||||| |||||||||||||||||||    
T  9828690 tactccctccgtccctaattataagacccttttg 9828657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 433
Target Start/End: Complemental strand, 16153295 - 16153258
Alignment:
Q  396 taatactccctccgtccataattataagacccttttga 433  Q
    ||||||||| ||||||| ||||||||||||||||||||    
T  16153295 taatactccatccgtccctaattataagacccttttga 16153258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 431
Target Start/End: Original strand, 16440930 - 16440963
Alignment:
Q  398 atactccctccgtccataattataagaccctttt 431  Q
    ||||||||||||||| ||||||||||||||||||    
T  16440930 atactccctccgtccctaattataagaccctttt 16440963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Original strand, 2106831 - 2106867
Alignment:
Q  399 tactccctccgtccataattataagacccttttgaaa 435  Q
    ||||||||||||||||||||||||||  |||||||||    
T  2106831 tactccctccgtccataattataagattcttttgaaa 2106867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 432
Target Start/End: Original strand, 3497537 - 3497573
Alignment:
Q  396 taatactccctccgtccataattataagacccttttg 432  Q
    ||||||||| ||||||| |||||||||||||||||||    
T  3497537 taatactccatccgtccctaattataagacccttttg 3497573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 433
Target Start/End: Original strand, 8949810 - 8949846
Alignment:
Q  397 aatactccctccgtccataattataagacccttttga 433  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  8949810 aatactacctccgtccctaattataagacccttttga 8949846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 398 - 434
Target Start/End: Original strand, 14435829 - 14435865
Alignment:
Q  398 atactccctccgtccataattataagacccttttgaa 434  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  14435829 atactacctccgtccctaattataagacccttttgaa 14435865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 436
Target Start/End: Original strand, 24857553 - 24857593
Alignment:
Q  396 taatactccctccgtccataattataagacccttttgaaaa 436  Q
    ||||||| ||||||||| |||||||||||| ||||||||||    
T  24857553 taatactacctccgtccctaattataagactcttttgaaaa 24857593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 432
Target Start/End: Original strand, 41383909 - 41383945
Alignment:
Q  396 taatactccctccgtccataattataagacccttttg 432  Q
    ||||||||||||||||| ||||||||||| |||||||    
T  41383909 taatactccctccgtccctaattataagatccttttg 41383945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000004; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 394 - 433
Target Start/End: Original strand, 37728708 - 37728747
Alignment:
Q  394 agtaatactccctccgtccataattataagacccttttga 433  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  37728708 agtaatactccctccgtccctaattataagacccttttga 37728747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 396 - 433
Target Start/End: Original strand, 7181347 - 7181384
Alignment:
Q  396 taatactccctccgtccataattataagacccttttga 433  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  7181347 taatactccctccgtccctaattataagacccttttga 7181384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 396 - 433
Target Start/End: Complemental strand, 22103969 - 22103932
Alignment:
Q  396 taatactccctccgtccataattataagacccttttga 433  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  22103969 taatactccctccgtccctaattataagacccttttga 22103932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 396 - 433
Target Start/End: Complemental strand, 51284102 - 51284065
Alignment:
Q  396 taatactccctccgtccataattataagacccttttga 433  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  51284102 taatactccctccgtccctaattataagacccttttga 51284065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 396 - 436
Target Start/End: Complemental strand, 10015829 - 10015789
Alignment:
Q  396 taatactccctccgtccataattataagacccttttgaaaa 436  Q
    ||||||| ||||||||| |||||||||||||||||||||||    
T  10015829 taatactacctccgtccctaattataagacccttttgaaaa 10015789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 397 - 433
Target Start/End: Complemental strand, 12050431 - 12050395
Alignment:
Q  397 aatactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||||| ||||||||||||||||||||    
T  12050431 aatactccctccgtccctaattataagacccttttga 12050395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 396 - 436
Target Start/End: Complemental strand, 19897876 - 19897836
Alignment:
Q  396 taatactccctccgtccataattataagacccttttgaaaa 436  Q
    ||||||| ||||||||| |||||||||||||||||||||||    
T  19897876 taatactacctccgtccctaattataagacccttttgaaaa 19897836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 396 - 432
Target Start/End: Complemental strand, 20862497 - 20862461
Alignment:
Q  396 taatactccctccgtccataattataagacccttttg 432  Q
    ||||||||||||||||| |||||||||||||||||||    
T  20862497 taatactccctccgtccctaattataagacccttttg 20862461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 397 - 433
Target Start/End: Complemental strand, 25149161 - 25149125
Alignment:
Q  397 aatactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||||| ||||||||||||||||||||    
T  25149161 aatactccctccgtccctaattataagacccttttga 25149125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 396 - 432
Target Start/End: Original strand, 26806112 - 26806148
Alignment:
Q  396 taatactccctccgtccataattataagacccttttg 432  Q
    ||||||||||||||||| |||||||||||||||||||    
T  26806112 taatactccctccgtccctaattataagacccttttg 26806148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 397 - 433
Target Start/End: Original strand, 44543780 - 44543816
Alignment:
Q  397 aatactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||||| ||||||||||||||||||||    
T  44543780 aatactccctccgtccctaattataagacccttttga 44543816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 396 - 432
Target Start/End: Original strand, 50647681 - 50647717
Alignment:
Q  396 taatactccctccgtccataattataagacccttttg 432  Q
    ||||||||||||||||| |||||||||||||||||||    
T  50647681 taatactccctccgtccctaattataagacccttttg 50647717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 433
Target Start/End: Complemental strand, 4759393 - 4759354
Alignment:
Q  394 agtaatactccctccgtccataattataagacccttttga 433  Q
    ||||||||| ||||||||| ||||||||||||||||||||    
T  4759393 agtaatactacctccgtccctaattataagacccttttga 4759354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 432
Target Start/End: Complemental strand, 14428908 - 14428873
Alignment:
Q  397 aatactccctccgtccataattataagacccttttg 432  Q
    |||||||||||||||| |||||||||||||||||||    
T  14428908 aatactccctccgtccctaattataagacccttttg 14428873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 433
Target Start/End: Complemental strand, 35868121 - 35868086
Alignment:
Q  398 atactccctccgtccataattataagacccttttga 433  Q
    ||||||||||||||| ||||||||||||||||||||    
T  35868121 atactccctccgtccctaattataagacccttttga 35868086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 436
Target Start/End: Original strand, 42801519 - 42801558
Alignment:
Q  397 aatactccctccgtccataattataagacccttttgaaaa 436  Q
    |||||| ||||||||| |||||||||||||||||||||||    
T  42801519 aatactacctccgtccctaattataagacccttttgaaaa 42801558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 433
Target Start/End: Original strand, 43868102 - 43868137
Alignment:
Q  398 atactccctccgtccataattataagacccttttga 433  Q
    ||||||||||||||| ||||||||||||||||||||    
T  43868102 atactccctccgtccctaattataagacccttttga 43868137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 4024052 - 4024086
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  4024052 tactccctccgtccctaattataagacccttttga 4024086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Complemental strand, 9499534 - 9499500
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  9499534 tactccctccgtccctaattataagacccttttga 9499500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 436
Target Start/End: Original strand, 10044841 - 10044879
Alignment:
Q  398 atactccctccgtccataattataagacccttttgaaaa 436  Q
    ||||||||||||||| ||||||||||| |||||||||||    
T  10044841 atactccctccgtccctaattataagatccttttgaaaa 10044879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 10220933 - 10220967
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  10220933 tactccctccgtccctaattataagacccttttga 10220967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 14428610 - 14428644
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  14428610 tactccctccgtccctaattataagacccttttga 14428644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 21756486 - 21756520
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  21756486 tactccctccgtccctaattataagacccttttga 21756520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Complemental strand, 26593802 - 26593768
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  26593802 tactccctccgtccctaattataagacccttttga 26593768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 436
Target Start/End: Complemental strand, 28875289 - 28875251
Alignment:
Q  398 atactccctccgtccataattataagacccttttgaaaa 436  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  28875289 atactacctccgtccctaattataagacccttttgaaaa 28875251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Complemental strand, 29719747 - 29719713
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||| ||||||||||||||||||||||||||||||    
T  29719747 tactacctccgtccataattataagacccttttga 29719713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 436
Target Start/End: Complemental strand, 32978778 - 32978740
Alignment:
Q  398 atactccctccgtccataattataagacccttttgaaaa 436  Q
    ||||||||||||||| |||||||| ||||||||||||||    
T  32978778 atactccctccgtccctaattataggacccttttgaaaa 32978740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 432
Target Start/End: Complemental strand, 33868746 - 33868712
Alignment:
Q  398 atactccctccgtccataattataagacccttttg 432  Q
    ||||||||||||||| |||||||||||||||||||    
T  33868746 atactccctccgtccctaattataagacccttttg 33868712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 45252773 - 45252807
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  45252773 tactccctccgtccctaattataagacccttttga 45252807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Complemental strand, 46050023 - 46049989
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  46050023 tactccctccgtccctaattataagacccttttga 46049989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Complemental strand, 46878476 - 46878442
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  46878476 tactccctccgtccttaattataagacccttttga 46878442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Complemental strand, 54604625 - 54604591
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  54604625 tactccctccgtccttaattataagacccttttga 54604591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 432
Target Start/End: Complemental strand, 4024348 - 4024315
Alignment:
Q  399 tactccctccgtccataattataagacccttttg 432  Q
    |||||||||||||| |||||||||||||||||||    
T  4024348 tactccctccgtccctaattataagacccttttg 4024315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Original strand, 4759088 - 4759125
Alignment:
Q  399 tactccctccgtccataattataagacccttttgaaaa 436  Q
    |||| ||||||||| |||||||||||||||||||||||    
T  4759088 tactacctccgtccctaattataagacccttttgaaaa 4759125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 433
Target Start/End: Complemental strand, 7051760 - 7051723
Alignment:
Q  396 taatactccctccgtccataattataagacccttttga 433  Q
    ||||||||||||||||| ||||||||||| ||||||||    
T  7051760 taatactccctccgtccctaattataagatccttttga 7051723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 432
Target Start/End: Original strand, 9779979 - 9780012
Alignment:
Q  399 tactccctccgtccataattataagacccttttg 432  Q
    |||||||||||||| |||||||||||||||||||    
T  9779979 tactccctccgtccctaattataagacccttttg 9780012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Complemental strand, 9780278 - 9780241
Alignment:
Q  399 tactccctccgtccataattataagacccttttgaaaa 436  Q
    ||||| |||||||| |||||||||||||||||||||||    
T  9780278 tactctctccgtccctaattataagacccttttgaaaa 9780241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Complemental strand, 15996810 - 15996773
Alignment:
Q  399 tactccctccgtccataattataagacccttttgaaaa 436  Q
    |||| ||||||||| |||||||||||||||||||||||    
T  15996810 tactacctccgtccctaattataagacccttttgaaaa 15996773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 432
Target Start/End: Original strand, 16434977 - 16435010
Alignment:
Q  399 tactccctccgtccataattataagacccttttg 432  Q
    |||||||||||||| |||||||||||||||||||    
T  16434977 tactccctccgtccctaattataagacccttttg 16435010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 433
Target Start/End: Complemental strand, 26306647 - 26306610
Alignment:
Q  396 taatactccctccgtccataattataagacccttttga 433  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  26306647 taatactccctccgttcctaattataagacccttttga 26306610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 433
Target Start/End: Original strand, 27687983 - 27688020
Alignment:
Q  396 taatactccctccgtccataattataagacccttttga 433  Q
    ||||||| ||||||||| ||||||||||||||||||||    
T  27687983 taatactacctccgtccttaattataagacccttttga 27688020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 432
Target Start/End: Complemental strand, 31531448 - 31531415
Alignment:
Q  399 tactccctccgtccataattataagacccttttg 432  Q
    |||||||||||||| |||||||||||||||||||    
T  31531448 tactccctccgtccctaattataagacccttttg 31531415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Original strand, 32978481 - 32978518
Alignment:
Q  399 tactccctccgtccataattataagacccttttgaaaa 436  Q
    |||||||||||||| ||||||||||| |||||||||||    
T  32978481 tactccctccgtccctaattataagatccttttgaaaa 32978518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Original strand, 33360885 - 33360922
Alignment:
Q  399 tactccctccgtccataattataagacccttttgaaaa 436  Q
    |||| ||||||||| |||||||||||||||||||||||    
T  33360885 tactacctccgtccttaattataagacccttttgaaaa 33360922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 432
Target Start/End: Complemental strand, 36005801 - 36005768
Alignment:
Q  399 tactccctccgtccataattataagacccttttg 432  Q
    |||||||||||||| |||||||||||||||||||    
T  36005801 tactccctccgtccctaattataagacccttttg 36005768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 433
Target Start/End: Complemental strand, 41392920 - 41392883
Alignment:
Q  396 taatactccctccgtccataattataagacccttttga 433  Q
    ||||||| ||||||||| ||||||||||||||||||||    
T  41392920 taatactacctccgtccctaattataagacccttttga 41392883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 435
Target Start/End: Complemental strand, 45513679 - 45513638
Alignment:
Q  394 agtaatactccctccgtccataattataagacccttttgaaa 435  Q
    |||| |||| ||||||||| ||||||||||||||||||||||    
T  45513679 agtagtactacctccgtccctaattataagacccttttgaaa 45513638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 436
Target Start/End: Complemental strand, 48904304 - 48904263
Alignment:
Q  395 gtaatactccctccgtccataattataagacccttttgaaaa 436  Q
    |||||||| ||||||||| |||||||||||||||||| ||||    
T  48904304 gtaatactacctccgtccctaattataagacccttttaaaaa 48904263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 432
Target Start/End: Original strand, 52058985 - 52059018
Alignment:
Q  399 tactccctccgtccataattataagacccttttg 432  Q
    |||||||||||||| |||||||||||||||||||    
T  52058985 tactccctccgtccctaattataagacccttttg 52059018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Original strand, 53361594 - 53361631
Alignment:
Q  399 tactccctccgtccataattataagacccttttgaaaa 436  Q
    |||||| ||||||| |||||||||||||||||||||||    
T  53361594 tactccatccgtccctaattataagacccttttgaaaa 53361631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 433
Target Start/End: Complemental strand, 53361895 - 53361858
Alignment:
Q  396 taatactccctccgtccataattataagacccttttga 433  Q
    ||||||||||||||||| ||||||||||||| ||||||    
T  53361895 taatactccctccgtccctaattataagaccattttga 53361858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 433
Target Start/End: Complemental strand, 24087374 - 24087338
Alignment:
Q  397 aatactccctccgtccataattataagacccttttga 433  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  24087374 aatactacctccgtccctaattataagacccttttga 24087338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 436
Target Start/End: Complemental strand, 355369 - 355331
Alignment:
Q  398 atactccctccgtccataattataagacccttttgaaaa 436  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  355369 atactccctccgtccctaattataagacccttttgaaaa 355331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000006; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 396 - 433
Target Start/End: Original strand, 32814430 - 32814467
Alignment:
Q  396 taatactccctccgtccataattataagacccttttga 433  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  32814430 taatactccctccgtccctaattataagacccttttga 32814467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 396 - 433
Target Start/End: Complemental strand, 33858906 - 33858869
Alignment:
Q  396 taatactccctccgtccataattataagacccttttga 433  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  33858906 taatactccctccgtccctaattataagacccttttga 33858869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 396 - 433
Target Start/End: Complemental strand, 39871653 - 39871616
Alignment:
Q  396 taatactccctccgtccataattataagacccttttga 433  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  39871653 taatactccctccgtccctaattataagacccttttga 39871616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 433
Target Start/End: Complemental strand, 29286075 - 29286040
Alignment:
Q  398 atactccctccgtccataattataagacccttttga 433  Q
    ||||||||||||||| ||||||||||||||||||||    
T  29286075 atactccctccgtccctaattataagacccttttga 29286040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 433
Target Start/End: Complemental strand, 36698169 - 36698134
Alignment:
Q  398 atactccctccgtccataattataagacccttttga 433  Q
    ||||||||||||||| ||||||||||||||||||||    
T  36698169 atactccctccgtccctaattataagacccttttga 36698134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 433
Target Start/End: Original strand, 38858297 - 38858332
Alignment:
Q  398 atactccctccgtccataattataagacccttttga 433  Q
    ||||||||||||||| ||||||||||||||||||||    
T  38858297 atactccctccgtccctaattataagacccttttga 38858332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 436
Target Start/End: Original strand, 45907243 - 45907282
Alignment:
Q  397 aatactccctccgtccataattataagacccttttgaaaa 436  Q
    |||||||||||||||| ||||||||| |||||||||||||    
T  45907243 aatactccctccgtccctaattataatacccttttgaaaa 45907282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 19920563 - 19920597
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  19920563 tactccctccgtccctaattataagacccttttga 19920597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 432
Target Start/End: Complemental strand, 20075145 - 20075111
Alignment:
Q  398 atactccctccgtccataattataagacccttttg 432  Q
    ||||||||||||||| |||||||||||||||||||    
T  20075145 atactccctccgtccctaattataagacccttttg 20075111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 21295151 - 21295185
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  21295151 tactccctccgtccctaattataagacccttttga 21295185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 26255096 - 26255130
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  26255096 tactccctccgtccctaattataagacccttttga 26255130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 436
Target Start/End: Original strand, 27813495 - 27813533
Alignment:
Q  398 atactccctccgtccataattataagacccttttgaaaa 436  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  27813495 atactacctccgtccctaattataagacccttttgaaaa 27813533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 432
Target Start/End: Complemental strand, 28061015 - 28060981
Alignment:
Q  398 atactccctccgtccataattataagacccttttg 432  Q
    ||||||||||||||| |||||||||||||||||||    
T  28061015 atactccctccgtccctaattataagacccttttg 28060981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Complemental strand, 32872412 - 32872378
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  32872412 tactccctccgtccctaattataagacccttttga 32872378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 39197718 - 39197752
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  39197718 tactccctccgtccctaattataagacccttttga 39197752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 40300230 - 40300264
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  40300230 tactccctccgtccctaattataagacccttttga 40300264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Complemental strand, 41003191 - 41003157
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  41003191 tactccctccgtccttaattataagacccttttga 41003157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Complemental strand, 41026133 - 41026099
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  41026133 tactccctccgtccctaattataagacccttttga 41026099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Complemental strand, 41252398 - 41252364
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  41252398 tactccctccgtccctaattataagacccttttga 41252364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 48521029 - 48521063
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  48521029 tactccctccgtccctaattataagacccttttga 48521063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Complemental strand, 18113203 - 18113166
Alignment:
Q  399 tactccctccgtccataattataagacccttttgaaaa 436  Q
    |||||||||||||  |||||||||||||||||||||||    
T  18113203 tactccctccgtctctaattataagacccttttgaaaa 18113166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Complemental strand, 32118200 - 32118163
Alignment:
Q  399 tactccctccgtccataattataagacccttttgaaaa 436  Q
    |||| ||||||||| |||||||||||||||||||||||    
T  32118200 tactacctccgtccctaattataagacccttttgaaaa 32118163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 433
Target Start/End: Complemental strand, 34012557 - 34012520
Alignment:
Q  396 taatactccctccgtccataattataagacccttttga 433  Q
    ||||||| ||||||||| ||||||||||||||||||||    
T  34012557 taatactacctccgtccctaattataagacccttttga 34012520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Complemental strand, 35569688 - 35569651
Alignment:
Q  399 tactccctccgtccataattataagacccttttgaaaa 436  Q
    |||| ||||||||| |||||||||||||||||||||||    
T  35569688 tactacctccgtccttaattataagacccttttgaaaa 35569651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 432
Target Start/End: Complemental strand, 38428444 - 38428411
Alignment:
Q  399 tactccctccgtccataattataagacccttttg 432  Q
    |||||||||||||| |||||||||||||||||||    
T  38428444 tactccctccgtccctaattataagacccttttg 38428411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Complemental strand, 44510380 - 44510343
Alignment:
Q  399 tactccctccgtccataattataagacccttttgaaaa 436  Q
    |||||||||||||| ||||||||||||| |||||||||    
T  44510380 tactccctccgtccctaattataagaccattttgaaaa 44510343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 433
Target Start/End: Complemental strand, 33381612 - 33381576
Alignment:
Q  397 aatactccctccgtccataattataagacccttttga 433  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  33381612 aatactacctccgtccctaattataagacccttttga 33381576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 433
Target Start/End: Complemental strand, 36646676 - 36646640
Alignment:
Q  397 aatactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||||| |||||| |||||||||||||    
T  36646676 aatactccctccgtccctaattagaagacccttttga 36646640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000006; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 399 - 436
Target Start/End: Original strand, 9038642 - 9038679
Alignment:
Q  399 tactccctccgtccataattataagacccttttgaaaa 436  Q
    |||||||||||||| |||||||||||||||||||||||    
T  9038642 tactccctccgtccctaattataagacccttttgaaaa 9038679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 399 - 436
Target Start/End: Complemental strand, 11847869 - 11847832
Alignment:
Q  399 tactccctccgtccataattataagacccttttgaaaa 436  Q
    |||||||||||||| |||||||||||||||||||||||    
T  11847869 tactccctccgtccctaattataagacccttttgaaaa 11847832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 396 - 436
Target Start/End: Complemental strand, 12144078 - 12144038
Alignment:
Q  396 taatactccctccgtccataattataagacccttttgaaaa 436  Q
    ||||||||||||||||| |||||||||||||||||| ||||    
T  12144078 taatactccctccgtccctaattataagacccttttaaaaa 12144038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 396 - 436
Target Start/End: Complemental strand, 13321366 - 13321326
Alignment:
Q  396 taatactccctccgtccataattataagacccttttgaaaa 436  Q
    ||||||| ||||||||| |||||||||||||||||||||||    
T  13321366 taatactacctccgtccctaattataagacccttttgaaaa 13321326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 433
Target Start/End: Original strand, 4844399 - 4844434
Alignment:
Q  398 atactccctccgtccataattataagacccttttga 433  Q
    ||||||||||||||| ||||||||||||||||||||    
T  4844399 atactccctccgtccctaattataagacccttttga 4844434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 436
Target Start/End: Complemental strand, 16122553 - 16122514
Alignment:
Q  397 aatactccctccgtccataattataagacccttttgaaaa 436  Q
    |||||| ||||||||| |||||||||||||||||||||||    
T  16122553 aatactacctccgtccctaattataagacccttttgaaaa 16122514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 433
Target Start/End: Original strand, 30248646 - 30248681
Alignment:
Q  398 atactccctccgtccataattataagacccttttga 433  Q
    ||||||||||||||| ||||||||||||||||||||    
T  30248646 atactccctccgtccctaattataagacccttttga 30248681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Complemental strand, 231142 - 231108
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  231142 tactccctccgtccctaattataagacccttttga 231108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 8743188 - 8743222
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  8743188 tactccctccgtccctaattataagacccttttga 8743222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 436
Target Start/End: Original strand, 13647867 - 13647905
Alignment:
Q  398 atactccctccgtccataattataagacccttttgaaaa 436  Q
    ||||||||||||||| | |||||||||||||||||||||    
T  13647867 atactccctccgtcccttattataagacccttttgaaaa 13647905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Complemental strand, 13648166 - 13648132
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  13648166 tactccctccgtccttaattataagacccttttga 13648132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 395 - 433
Target Start/End: Complemental strand, 19097842 - 19097804
Alignment:
Q  395 gtaatactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  19097842 gtaatactccctccgtctctaattataagacccttttga 19097804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Complemental strand, 23398176 - 23398142
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  23398176 tactccctccgtccctaattataagacccttttga 23398142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Complemental strand, 34301869 - 34301835
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  34301869 tactccctccgtccctaattataagacccttttga 34301835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 432
Target Start/End: Complemental strand, 34741764 - 34741730
Alignment:
Q  398 atactccctccgtccataattataagacccttttg 432  Q
    ||||||||||||||| |||||||||||||||||||    
T  34741764 atactccctccgtccctaattataagacccttttg 34741730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 432
Target Start/End: Original strand, 9388529 - 9388562
Alignment:
Q  399 tactccctccgtccataattataagacccttttg 432  Q
    |||||||||||||| |||||||||||||||||||    
T  9388529 tactccctccgtccctaattataagacccttttg 9388562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 434
Target Start/End: Complemental strand, 16273007 - 16272970
Alignment:
Q  397 aatactccctccgtccataattataagacccttttgaa 434  Q
    |||||| ||||||||| |||||||||||||||||||||    
T  16273007 aatacttcctccgtccctaattataagacccttttgaa 16272970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 433
Target Start/End: Complemental strand, 25045683 - 25045646
Alignment:
Q  396 taatactccctccgtccataattataagacccttttga 433  Q
    ||||||| ||||||||| ||||||||||||||||||||    
T  25045683 taatactacctccgtccctaattataagacccttttga 25045646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Original strand, 31091445 - 31091482
Alignment:
Q  399 tactccctccgtccataattataagacccttttgaaaa 436  Q
    |||| ||||||||| |||||||||||||||||||||||    
T  31091445 tactacctccgtccctaattataagacccttttgaaaa 31091482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 436
Target Start/End: Original strand, 1147005 - 1147045
Alignment:
Q  396 taatactccctccgtccataattataagacccttttgaaaa 436  Q
    |||||||||||| |||| |||||||| ||||||||||||||    
T  1147005 taatactccctctgtccttaattataggacccttttgaaaa 1147045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 1730138 - 1730102
Alignment:
Q  399 tactccctccgtccataattataagacccttttgaaa 435  Q
    |||||||||||||| ||||||||||| ||||||||||    
T  1730138 tactccctccgtccctaattataagatccttttgaaa 1730102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 433
Target Start/End: Original strand, 15498627 - 15498663
Alignment:
Q  397 aatactccctccgtccataattataagacccttttga 433  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  15498627 aatactacctccgtccctaattataagacccttttga 15498663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 436
Target Start/End: Complemental strand, 15498928 - 15498888
Alignment:
Q  396 taatactccctccgtccataattataagacccttttgaaaa 436  Q
    ||||||| ||||||||| |||||||| ||||||||||||||    
T  15498928 taatactacctccgtccctaattataggacccttttgaaaa 15498888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 433
Target Start/End: Original strand, 25197150 - 25197186
Alignment:
Q  397 aatactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||||| ||||||||||| ||||||||    
T  25197150 aatactccctccgtccctaattataagatccttttga 25197186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 433
Target Start/End: Complemental strand, 34915582 - 34915546
Alignment:
Q  397 aatactccctccgtccataattataagacccttttga 433  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  34915582 aatactacctccgtccctaattataagacccttttga 34915546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000006; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 399 - 436
Target Start/End: Complemental strand, 20391474 - 20391437
Alignment:
Q  399 tactccctccgtccataattataagacccttttgaaaa 436  Q
    |||||||||||||| |||||||||||||||||||||||    
T  20391474 tactccctccgtccctaattataagacccttttgaaaa 20391437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 399 - 436
Target Start/End: Complemental strand, 35675957 - 35675920
Alignment:
Q  399 tactccctccgtccataattataagacccttttgaaaa 436  Q
    |||||||||||||| |||||||||||||||||||||||    
T  35675957 tactccctccgtccctaattataagacccttttgaaaa 35675920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 397 - 433
Target Start/End: Original strand, 36391852 - 36391888
Alignment:
Q  397 aatactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||||| ||||||||||||||||||||    
T  36391852 aatactccctccgtccttaattataagacccttttga 36391888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 397 - 433
Target Start/End: Complemental strand, 45742845 - 45742809
Alignment:
Q  397 aatactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||||| ||||||||||||||||||||    
T  45742845 aatactccctccgtccctaattataagacccttttga 45742809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 396 - 436
Target Start/End: Complemental strand, 52181226 - 52181186
Alignment:
Q  396 taatactccctccgtccataattataagacccttttgaaaa 436  Q
    ||||||| ||||||||||||||||||||||| |||||||||    
T  52181226 taatactacctccgtccataattataagaccattttgaaaa 52181186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 433
Target Start/End: Original strand, 4035824 - 4035859
Alignment:
Q  398 atactccctccgtccataattataagacccttttga 433  Q
    ||||||||||||||| ||||||||||||||||||||    
T  4035824 atactccctccgtccctaattataagacccttttga 4035859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 432
Target Start/End: Complemental strand, 20747469 - 20747434
Alignment:
Q  397 aatactccctccgtccataattataagacccttttg 432  Q
    |||||||||||||||| |||||||||||||||||||    
T  20747469 aatactccctccgtccctaattataagacccttttg 20747434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 436
Target Start/End: Original strand, 1028517 - 1028555
Alignment:
Q  398 atactccctccgtccataattataagacccttttgaaaa 436  Q
    ||||||||||||| | |||||||||||||||||||||||    
T  1028517 atactccctccgttcctaattataagacccttttgaaaa 1028555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Complemental strand, 5375594 - 5375560
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  5375594 tactccctccgtccctaattataagacccttttga 5375560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Complemental strand, 5743696 - 5743662
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  5743696 tactccctccgtccctaattataagacccttttga 5743662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Complemental strand, 9328277 - 9328243
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  9328277 tactccctccgtccctaattataagacccttttga 9328243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 436
Target Start/End: Original strand, 18872716 - 18872754
Alignment:
Q  398 atactccctccgtccataattataagacccttttgaaaa 436  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  18872716 atactacctccgtccctaattataagacccttttgaaaa 18872754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Complemental strand, 26626039 - 26626005
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  26626039 tactccctccgtccctaattataagacccttttga 26626005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 30771528 - 30771562
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  30771528 tactccctccgtccctaattataagacccttttga 30771562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Complemental strand, 32033030 - 32032996
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  32033030 tactccctccgtccctaattataagacccttttga 32032996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 33413518 - 33413552
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  33413518 tactccctccgtccctaattataagacccttttga 33413552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Complemental strand, 34273256 - 34273222
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  34273256 tactccctccgtccctaattataagacccttttga 34273222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 44294789 - 44294823
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  44294789 tactccctccgtccctaattataagacccttttga 44294823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 47806860 - 47806894
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  47806860 tactccctccgtccctaattataagacccttttga 47806894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 52977982 - 52978016
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  52977982 tactccctccgtccctaattataagacccttttga 52978016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 432
Target Start/End: Complemental strand, 4036122 - 4036089
Alignment:
Q  399 tactccctccgtccataattataagacccttttg 432  Q
    |||||||||||||| |||||||||||||||||||    
T  4036122 tactccctccgtccctaattataagacccttttg 4036089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 432
Target Start/End: Original strand, 4549629 - 4549662
Alignment:
Q  399 tactccctccgtccataattataagacccttttg 432  Q
    |||||||||||||| |||||||||||||||||||    
T  4549629 tactccctccgtccctaattataagacccttttg 4549662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Complemental strand, 7698506 - 7698469
Alignment:
Q  399 tactccctccgtccataattataagacccttttgaaaa 436  Q
    |||| ||||||||| |||||||||||||||||||||||    
T  7698506 tactacctccgtccctaattataagacccttttgaaaa 7698469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 433
Target Start/End: Complemental strand, 17610060 - 17610023
Alignment:
Q  396 taatactccctccgtccataattataagacccttttga 433  Q
    ||||||||||||||||| ||||||||||| ||||||||    
T  17610060 taatactccctccgtccctaattataagatccttttga 17610023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Original strand, 26625743 - 26625780
Alignment:
Q  399 tactccctccgtccataattataagacccttttgaaaa 436  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  26625743 tactccctccgtccctaattataggacccttttgaaaa 26625780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 432
Target Start/End: Original strand, 29014064 - 29014097
Alignment:
Q  399 tactccctccgtccataattataagacccttttg 432  Q
    |||||||||||||| |||||||||||||||||||    
T  29014064 tactccctccgtccctaattataagacccttttg 29014097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Complemental strand, 37776774 - 37776737
Alignment:
Q  399 tactccctccgtccataattataagacccttttgaaaa 436  Q
    |||| ||||||||| |||||||||||||||||||||||    
T  37776774 tactacctccgtccttaattataagacccttttgaaaa 37776737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Complemental strand, 39671023 - 39670986
Alignment:
Q  399 tactccctccgtccataattataagacccttttgaaaa 436  Q
    |||| ||||||||| |||||||||||||||||||||||    
T  39671023 tactacctccgtccctaattataagacccttttgaaaa 39670986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 433
Target Start/End: Original strand, 52870641 - 52870678
Alignment:
Q  396 taatactccctccgtccataattataagacccttttga 433  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  52870641 taatactccctccgtctctaattataagacccttttga 52870678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 432
Target Start/End: Original strand, 55631999 - 55632032
Alignment:
Q  399 tactccctccgtccataattataagacccttttg 432  Q
    |||||||||||||| |||||||||||||||||||    
T  55631999 tactccctccgtccctaattataagacccttttg 55632032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 433
Target Start/End: Original strand, 375422 - 375458
Alignment:
Q  397 aatactccctccgtccataattataagacccttttga 433  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  375422 aatactacctccgtccttaattataagacccttttga 375458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 433
Target Start/End: Complemental strand, 2615984 - 2615948
Alignment:
Q  397 aatactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||||| |||| |||||||||||||||    
T  2615984 aatactccctccgtccctaatcataagacccttttga 2615948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 433
Target Start/End: Original strand, 6807427 - 6807463
Alignment:
Q  397 aatactccctccgtccataattataagacccttttga 433  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  6807427 aatactccctctgtccctaattataagacccttttga 6807463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 436
Target Start/End: Complemental strand, 26889939 - 26889899
Alignment:
Q  396 taatactccctccgtccataattataagacccttttgaaaa 436  Q
    ||||||| ||||||||| ||||||||||| |||||||||||    
T  26889939 taatactacctccgtccctaattataagatccttttgaaaa 26889899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 436
Target Start/End: Complemental strand, 30050124 - 30050084
Alignment:
Q  396 taatactccctccgtccataattataagacccttttgaaaa 436  Q
    ||||||| ||||||||| |||||||||||| ||||||||||    
T  30050124 taatactacctccgtccctaattataagactcttttgaaaa 30050084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 433
Target Start/End: Complemental strand, 45097204 - 45097168
Alignment:
Q  397 aatactccctccgtccataattataagacccttttga 433  Q
    |||||||| ||||||| ||||||||||||||||||||    
T  45097204 aatactccatccgtccctaattataagacccttttga 45097168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 433
Target Start/End: Original strand, 48030311 - 48030347
Alignment:
Q  397 aatactccctccgtccataattataagacccttttga 433  Q
    |||||||||||| ||| ||||||||||||||||||||    
T  48030311 aatactccctccatccctaattataagacccttttga 48030347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 398 - 434
Target Start/End: Complemental strand, 49228756 - 49228720
Alignment:
Q  398 atactccctccgtccataattataagacccttttgaa 434  Q
    ||||||||||||||  |||||||||||||||||||||    
T  49228756 atactccctccgtctctaattataagacccttttgaa 49228720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 433
Target Start/End: Original strand, 49793089 - 49793125
Alignment:
Q  397 aatactccctccgtccataattataagacccttttga 433  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  49793089 aatactacctccgtccctaattataagacccttttga 49793125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 431
Target Start/End: Complemental strand, 53277222 - 53277190
Alignment:
Q  399 tactccctccgtccataattataagaccctttt 431  Q
    |||||||||||||| ||||||||||||||||||    
T  53277222 tactccctccgtccctaattataagaccctttt 53277190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 433
Target Start/End: Original strand, 56432516 - 56432552
Alignment:
Q  397 aatactccctccgtccataattataagacccttttga 433  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  56432516 aatactacctccgtccctaattataagacccttttga 56432552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 34; Significance: 0.0000000006; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 399 - 436
Target Start/End: Complemental strand, 34113823 - 34113786
Alignment:
Q  399 tactccctccgtccataattataagacccttttgaaaa 436  Q
    |||||||||||||| |||||||||||||||||||||||    
T  34113823 tactccctccgtccctaattataagacccttttgaaaa 34113786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 397 - 433
Target Start/End: Original strand, 11201681 - 11201717
Alignment:
Q  397 aatactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||||| ||||||||||||||||||||    
T  11201681 aatactccctccgtccctaattataagacccttttga 11201717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 397 - 433
Target Start/End: Complemental strand, 34883887 - 34883851
Alignment:
Q  397 aatactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||||| ||||||||||||||||||||    
T  34883887 aatactccctccgtccctaattataagacccttttga 34883851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 433
Target Start/End: Complemental strand, 8841695 - 8841660
Alignment:
Q  398 atactccctccgtccataattataagacccttttga 433  Q
    ||||||||||||||| ||||||||||||||||||||    
T  8841695 atactccctccgtccttaattataagacccttttga 8841660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 436
Target Start/End: Complemental strand, 12890247 - 12890208
Alignment:
Q  397 aatactccctccgtccataattataagacccttttgaaaa 436  Q
    |||||| ||||||||| |||||||||||||||||||||||    
T  12890247 aatactacctccgtccctaattataagacccttttgaaaa 12890208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 433
Target Start/End: Original strand, 20252209 - 20252244
Alignment:
Q  398 atactccctccgtccataattataagacccttttga 433  Q
    ||||||||||||||| ||||||||||||||||||||    
T  20252209 atactccctccgtccctaattataagacccttttga 20252244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 433
Target Start/End: Complemental strand, 34062703 - 34062668
Alignment:
Q  398 atactccctccgtccataattataagacccttttga 433  Q
    ||||||||||||||| ||||||||||||||||||||    
T  34062703 atactccctccgtccctaattataagacccttttga 34062668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 433
Target Start/End: Original strand, 40607701 - 40607736
Alignment:
Q  398 atactccctccgtccataattataagacccttttga 433  Q
    ||||||||||||||| ||||||||||||||||||||    
T  40607701 atactccctccgtccctaattataagacccttttga 40607736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 433
Target Start/End: Original strand, 41450515 - 41450550
Alignment:
Q  398 atactccctccgtccataattataagacccttttga 433  Q
    ||||||||||||||| ||||||||||||||||||||    
T  41450515 atactccctccgtccctaattataagacccttttga 41450550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 436
Target Start/End: Original strand, 42629373 - 42629408
Alignment:
Q  401 ctccctccgtccataattataagacccttttgaaaa 436  Q
    |||||||||||| |||||||||||||||||||||||    
T  42629373 ctccctccgtccctaattataagacccttttgaaaa 42629408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 2438225 - 2438259
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  2438225 tactccctccgtccctaattataagacccttttga 2438259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 394 - 436
Target Start/End: Original strand, 3095294 - 3095336
Alignment:
Q  394 agtaatactccctccgtccataattataagacccttttgaaaa 436  Q
    |||| |||| ||||||||| |||||||||||||||||||||||    
T  3095294 agtactactacctccgtccctaattataagacccttttgaaaa 3095336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 7491844 - 7491878
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  7491844 tactccctccgtccctaattataagacccttttga 7491878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Complemental strand, 8716929 - 8716895
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  8716929 tactccctccgtccctaattataagacccttttga 8716895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 436
Target Start/End: Original strand, 9701069 - 9701107
Alignment:
Q  398 atactccctccgtccataattataagacccttttgaaaa 436  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  9701069 atactacctccgtccttaattataagacccttttgaaaa 9701107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 436
Target Start/End: Original strand, 15227889 - 15227927
Alignment:
Q  398 atactccctccgtccataattataagacccttttgaaaa 436  Q
    ||||||||||||||| |||||||| ||||||||||||||    
T  15227889 atactccctccgtccctaattataggacccttttgaaaa 15227927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 432
Target Start/End: Original strand, 16108214 - 16108248
Alignment:
Q  398 atactccctccgtccataattataagacccttttg 432  Q
    ||||||||||||||| |||||||||||||||||||    
T  16108214 atactccctccgtccctaattataagacccttttg 16108248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Complemental strand, 17408331 - 17408297
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  17408331 tactccctccgtccctaattataagacccttttga 17408297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 22182963 - 22182929
Alignment:
Q  397 aatactccctccgtccataattataagaccctttt 431  Q
    |||||||||||||||| ||||||||||||||||||    
T  22182963 aatactccctccgtccctaattataagaccctttt 22182929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 23788969 - 23789003
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  23788969 tactccctccgtccttaattataagacccttttga 23789003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 27560206 - 27560240
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  27560206 tactccctccgtccctaattataagacccttttga 27560240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Complemental strand, 36131065 - 36131031
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  36131065 tactccctccgtccctaattataagacccttttga 36131031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 432
Target Start/End: Original strand, 39833738 - 39833772
Alignment:
Q  398 atactccctccgtccataattataagacccttttg 432  Q
    ||||||||||||||| |||||||||||||||||||    
T  39833738 atactccctccgtccctaattataagacccttttg 39833772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 436
Target Start/End: Original strand, 41422511 - 41422549
Alignment:
Q  398 atactccctccgtccataattataagacccttttgaaaa 436  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  41422511 atactacctccgtccctaattataagacccttttgaaaa 41422549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 436
Target Start/End: Complemental strand, 41494660 - 41494622
Alignment:
Q  398 atactccctccgtccataattataagacccttttgaaaa 436  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  41494660 atactacctccgtccctaattataagacccttttgaaaa 41494622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Complemental strand, 2200277 - 2200240
Alignment:
Q  399 tactccctccgtccataattataagacccttttgaaaa 436  Q
    |||| ||||||||| |||||||||||||||||||||||    
T  2200277 tactacctccgtccctaattataagacccttttgaaaa 2200240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 432
Target Start/End: Complemental strand, 2438522 - 2438489
Alignment:
Q  399 tactccctccgtccataattataagacccttttg 432  Q
    |||||||||||||| |||||||||||||||||||    
T  2438522 tactccctccgtccctaattataagacccttttg 2438489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 433
Target Start/End: Original strand, 5664635 - 5664672
Alignment:
Q  396 taatactccctccgtccataattataagacccttttga 433  Q
    ||||||||||||||||| ||||||||||||| ||||||    
T  5664635 taatactccctccgtccctaattataagacctttttga 5664672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 432
Target Start/End: Complemental strand, 7492141 - 7492108
Alignment:
Q  399 tactccctccgtccataattataagacccttttg 432  Q
    |||||||||||||| |||||||||||||||||||    
T  7492141 tactccctccgtccctaattataagacccttttg 7492108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 433
Target Start/End: Complemental strand, 15228189 - 15228152
Alignment:
Q  396 taatactccctccgtccataattataagacccttttga 433  Q
    ||||||||||||||||| ||||||||||| ||||||||    
T  15228189 taatactccctccgtccctaattataagatccttttga 15228152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Complemental strand, 18374741 - 18374704
Alignment:
Q  399 tactccctccgtccataattataagacccttttgaaaa 436  Q
    |||| ||||||||| |||||||||||||||||||||||    
T  18374741 tactacctccgtccctaattataagacccttttgaaaa 18374704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 432
Target Start/End: Complemental strand, 22897688 - 22897655
Alignment:
Q  399 tactccctccgtccataattataagacccttttg 432  Q
    |||||||||||||| |||||||||||||||||||    
T  22897688 tactccctccgtccctaattataagacccttttg 22897655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Complemental strand, 24345715 - 24345678
Alignment:
Q  399 tactccctccgtccataattataagacccttttgaaaa 436  Q
    |||| ||||||||| |||||||||||||||||||||||    
T  24345715 tactacctccgtccctaattataagacccttttgaaaa 24345678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Original strand, 32120944 - 32120981
Alignment:
Q  399 tactccctccgtccataattataagacccttttgaaaa 436  Q
    |||||||||||||| ||||||||||| |||||||||||    
T  32120944 tactccctccgtccctaattataagatccttttgaaaa 32120981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 432
Target Start/End: Original strand, 45474351 - 45474384
Alignment:
Q  399 tactccctccgtccataattataagacccttttg 432  Q
    |||||||||||||| |||||||||||||||||||    
T  45474351 tactccctccgtccctaattataagacccttttg 45474384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 395 - 431
Target Start/End: Original strand, 8841393 - 8841429
Alignment:
Q  395 gtaatactccctccgtccataattataagaccctttt 431  Q
    |||||||||||||||||| |||||||||||| |||||    
T  8841393 gtaatactccctccgtccctaattataagactctttt 8841429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 433
Target Start/End: Original strand, 22897389 - 22897425
Alignment:
Q  397 aatactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||||| ||||||||||| ||||||||    
T  22897389 aatactccctccgtccctaattataagatccttttga 22897425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 433
Target Start/End: Original strand, 25624731 - 25624767
Alignment:
Q  397 aatactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  25624731 aatactccctccgtccctaattataagacctttttga 25624767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 433
Target Start/End: Complemental strand, 44573921 - 44573885
Alignment:
Q  397 aatactccctccgtccataattataagacccttttga 433  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  44573921 aatactacctccgtccttaattataagacccttttga 44573885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 397 - 433
Target Start/End: Complemental strand, 259161 - 259125
Alignment:
Q  397 aatactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||||| ||||||||||||||||||||    
T  259161 aatactccctccgtccctaattataagacccttttga 259125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 433
Target Start/End: Original strand, 12064 - 12099
Alignment:
Q  398 atactccctccgtccataattataagacccttttga 433  Q
    ||||||||||||||| ||||||||||||||||||||    
T  12064 atactccctccgtccctaattataagacccttttga 12099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 433
Target Start/End: Complemental strand, 51720 - 51685
Alignment:
Q  398 atactccctccgtccataattataagacccttttga 433  Q
    ||||||||||||||| ||||||||||||||||||||    
T  51720 atactccctccgtccctaattataagacccttttga 51685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 436
Target Start/End: Original strand, 164212 - 164251
Alignment:
Q  397 aatactccctccgtccataattataagacccttttgaaaa 436  Q
    |||||| ||||||||| |||||||||||||||||||||||    
T  164212 aatactacctccgtccctaattataagacccttttgaaaa 164251  T

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Target: scaffold0012 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 433
Target Start/End: Original strand, 47639 - 47674
Alignment:
Q  398 atactccctccgtccataattataagacccttttga 433  Q
    ||||||||||||||| ||||||||||||||||||||    
T  47639 atactccctccgtccctaattataagacccttttga 47674  T

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Target: scaffold0604 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Complemental strand, 3819 - 3785
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  3819 tactccctccgtccctaattataagacccttttga 3785  T

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Target: scaffold0604; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Original strand, 3525 - 3562
Alignment:
Q  399 tactccctccgtccataattataagacccttttgaaaa 436  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  3525 tactccctccgtccctaattataggacccttttgaaaa 3562  T

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Target: scaffold0308 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Complemental strand, 14385 - 14351
Alignment:
Q  399 tactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||| ||||||||||||||||||||    
T  14385 tactccctccgtccttaattataagacccttttga 14351  T

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Target: scaffold0163 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 435
Target Start/End: Complemental strand, 1485 - 1447
Alignment:
Q  397 aatactccctccgtccataattataagacccttttgaaa 435  Q
    |||||| ||||||||| ||||||||||||||||||||||    
T  1485 aatactacctccgtccctaattataagacccttttgaaa 1447  T

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Target: scaffold0368 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Original strand, 8218 - 8255
Alignment:
Q  399 tactccctccgtccataattataagacccttttgaaaa 436  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  8218 tactccctccgtccctaattgtaagacccttttgaaaa 8255  T

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Target: scaffold0240 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Complemental strand, 18793 - 18756
Alignment:
Q  399 tactccctccgtccataattataagacccttttgaaaa 436  Q
    |||| ||||||||| |||||||||||||||||||||||    
T  18793 tactacctccgtccctaattataagacccttttgaaaa 18756  T

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Target: scaffold0025 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 432
Target Start/End: Original strand, 65378 - 65411
Alignment:
Q  399 tactccctccgtccataattataagacccttttg 432  Q
    |||||||||||||| |||||||||||||||||||    
T  65378 tactccctccgtccctaattataagacccttttg 65411  T

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Target: scaffold0025; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 433
Target Start/End: Complemental strand, 65676 - 65640
Alignment:
Q  397 aatactccctccgtccataattataagacccttttga 433  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  65676 aatactccctccgtccctaattataagacctttttga 65640  T

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Target: scaffold0237 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 432
Target Start/End: Complemental strand, 6649 - 6613
Alignment:
Q  396 taatactccctccgtccataattataagacccttttg 432  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  6649 taatactacctccgtccctaattataagacccttttg 6613  T

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Target: scaffold0009 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 436
Target Start/End: Original strand, 246453 - 246493
Alignment:
Q  396 taatactccctccgtccataattataagacccttttgaaaa 436  Q
    ||||||| ||||||| | |||||||||||||||||||||||    
T  246453 taatactacctccgttcctaattataagacccttttgaaaa 246493  T

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