View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19380_low_59 (Length: 305)
Name: NF19380_low_59
Description: NF19380
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19380_low_59 |
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Alignment Details
Target: chr4 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 20 - 283
Target Start/End: Complemental strand, 1769652 - 1769389
Alignment:
| Q |
20 |
cttacgccaagtcagaagctcattcaaacaacaaccaacctcaaacacaacaccttcccctctctctccctcgcaacaaagcgaatcctctgttgatatc |
119 |
Q |
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| T |
1769652 |
cttacgccaagtcagaagctcattcaaacaacaaccaacctcaaacacaacaccttcccctctctctccctcgaaacaaagcgaatcctctgttgatatc |
1769553 |
T |
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| Q |
120 |
atgagcaaaatgcaaaacttccgttacaaaaccaccgtacctgattccgatgatctattaactcagaagaagccaatctcgtttcaggatatgtatagta |
219 |
Q |
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||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
1769552 |
atgagcaaaatccaaagcttccgttacaaaaccaccgtacctgattccgatgatctattaactcagaagaagacaatctcgtttcaggatatgtatagta |
1769453 |
T |
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| Q |
220 |
gaatgcataatcgatccaaagattccgctgcgaatattggttcggattcgtcgaaaactaccat |
283 |
Q |
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| T |
1769452 |
gaatgcataatcgatccaaagattccgctgcgaatattggttcggattcgtcgaaaactaccat |
1769389 |
T |
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