View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19380_low_62 (Length: 286)
Name: NF19380_low_62
Description: NF19380
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19380_low_62 |
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Alignment Details
Target: chr7 (Bit Score: 211; Significance: 1e-115; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 47290830 - 47291103
Alignment:
| Q |
1 |
tacaaactgaaaaagaaatgtcacgacgagaaggagttaaataaagaagcttgccaatctgtttcctataaggaaattcctctcttggatcttgcggttt |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||| |
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| T |
47290830 |
tacaaactgaaaaagaaatgtcacgacgagaaggagttaaataaagaagcttgccaatcagcttcctgtaaggaaattcctctcttggatcttgcggttt |
47290929 |
T |
|
| Q |
101 |
caaaactcgaaaaatacctgagaacactaaatcttttttaacactgttaagttcagaaagattgttaccataaattaataaatcattcatactaatt--- |
197 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47290930 |
caaaactcgaaaaataactgagaacactaaatcttttttaacactgttaagttcagaaagattgttaccataaattaataaatcattcatactaattaaa |
47291029 |
T |
|
| Q |
198 |
---nnnnnnnncagtgaaagcagcagaagagcttttagtaaataaggaataatcagacttagattagactgctt |
268 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47291030 |
aaaaaaaaaaacagtgaaagcagcagaagagcttttagtaaataaggaataatcagacttagattagactgctt |
47291103 |
T |
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