View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19381_high_44 (Length: 205)
Name: NF19381_high_44
Description: NF19381
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19381_high_44 |
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Alignment Details
Target: chr2 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 16 - 191
Target Start/End: Original strand, 28249180 - 28249354
Alignment:
| Q |
16 |
gaaaatcctctcaaatttgactaatctcaatctttaatagtcaacatgagtttgcacataggatattatttcaatcccaataatctcaatcattcacaac |
115 |
Q |
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| T |
28249180 |
gaaaatcctctcaaatttgactaatgtcaatctttaataatcaacatgagtttgcacataggatattatttcaatctcaataatctcaatcattcacaac |
28249279 |
T |
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| Q |
116 |
ttatcttcctaattcctccgaagtcacttagcaaatttcggagaaaaaattgcacagacattacacacagtattat |
191 |
Q |
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| T |
28249280 |
ttatcttcctaattcctccgaagtcac-tagcaaatttcggggaaaaaattgtaaagacattacacacattattat |
28249354 |
T |
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