View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19381_low_10 (Length: 514)
Name: NF19381_low_10
Description: NF19381
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19381_low_10 |
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Alignment Details
Target: chr2 (Bit Score: 418; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 418; E-Value: 0
Query Start/End: Original strand, 9 - 492
Target Start/End: Original strand, 36603997 - 36604480
Alignment:
| Q |
9 |
atcagagacagtgaagttggacacagagattgagctgactcgaaaatgaggtttatgtgggtccatgacattccaagctatagcgatgatgacagttaaa |
108 |
Q |
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| T |
36603997 |
atcagagacagtgaagttggacacagagattgagctgactcgaaaatgagttttatgtgggtccatgacattccaagctatagcgatgatgacagttaaa |
36604096 |
T |
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| Q |
109 |
gtgagaaagagtaaaatgaatgtccaggtaagtcgacggactacaccgagagtagaggaccccggtgtcctagaagaagcattggtgctggtatgaggag |
208 |
Q |
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| T |
36604097 |
gtgagaaagagtaaaatgaatgtccaggtaagtcgacggactacaccgagagtagaggaccccggtgtcctagaagaagcattggtgctggtatgaggag |
36604196 |
T |
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| Q |
209 |
gctgaggctccatgtaaattttggaatgaagttgggtatgtggtaggagttatgctatagctagtagtataaacaaaattttggaacagagcttttagta |
308 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36604197 |
gctgaggctccatgtaaattttggaatgaagctgggtatgtggtaggagttatgctatagctagtagtataaacaaaattttggaacagagcttttagta |
36604296 |
T |
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| Q |
309 |
ttgtctctctttagcaacatacaatctttaaggggaatgtatattgttaaagacagaaagggaaagtaggacaatgaatatatgtgataattgcaaaagg |
408 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36604297 |
ttgtctctctttagcaacaaacaatctttaaggggaatgtatattgttaaagacagaaagggaaagtaggacaatgaatatatgtgataattgcaaaagg |
36604396 |
T |
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| Q |
409 |
tgaggnnnnnnnnnnnnnnnnnngtagtaactatgaagaggtaggaattctgacgtataaattggtggtatactttaaactaag |
492 |
Q |
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| T |
36604397 |
tgaggtatatatatttatatatagtagtaactatgaagaggtaggaattctgacgtataaattggtggtatactttaaactaag |
36604480 |
T |
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