View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19381_low_27 (Length: 311)
Name: NF19381_low_27
Description: NF19381
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19381_low_27 |
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Alignment Details
Target: chr7 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 16 - 287
Target Start/End: Complemental strand, 47125511 - 47125238
Alignment:
| Q |
16 |
attgattatttactagagaggattaactatttggaaaacactatccgtaaaggattctgaccgttggagggttttaaccaaataaatttagacgaggagc |
115 |
Q |
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| T |
47125511 |
attgattatttactagagaggattgactatttggaaaacactatccgtaaaggattctgaccgttggagggttttaaccaaataaatttagacgaggagc |
47125412 |
T |
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| Q |
116 |
accaagtgtagtgtcatgtatcattaagactagaaagtctcacctaaaacacgagacacataatctaatagcaaataacttcttttt--gaaggattttg |
213 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
47125411 |
accaagtgtagtgtcatgtatcattaagactagaaagtctcacctaaaacacgagacacataatctaatagcaaataacttcttttttgaaaggattttg |
47125312 |
T |
|
| Q |
214 |
attttgtgaaatgcagtttacactaaaacaaaccttttacaacttaacaacttcattttcaattgaagatcact |
287 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47125311 |
attttgtgaaatgcagtttacactaaaacaaaccttttacaacttaacaacttcattttcaattgaagatcact |
47125238 |
T |
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