View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19382_high_33 (Length: 429)
Name: NF19382_high_33
Description: NF19382
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19382_high_33 |
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Alignment Details
Target: chr6 (Bit Score: 292; Significance: 1e-164; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 17 - 420
Target Start/End: Complemental strand, 32212030 - 32211636
Alignment:
| Q |
17 |
aatgaggagtagttttgtacac-aaaagttgaagtagaatgaaggaactattattttctgttctgtcattatgttgttattgttataaacaatgtatagt |
115 |
Q |
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| T |
32212030 |
aatgaggagtagttttgtacaccaaaagttgaagtagaatgaaggaactattattttctgttctgtcattatgttgttattgttataaacaatgtatagt |
32211931 |
T |
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| Q |
116 |
atcatcaatacctatgtcatgcttcaacaattgtccttcaagaaagtnnnnnnnnnnnnnnnnnntcaaaggtgtactaatgtctcttgttttgagactt |
215 |
Q |
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| T |
32211930 |
atcatcaatacctatgtcatgcttcaacaattgtccttcaagaaagtaaaaataaataa------tcaaaggtgtactaatgtctcttgttttgagactt |
32211837 |
T |
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| Q |
216 |
tagatgtttttgagtaacacaatgtataatcaggaattactaatgtcttttatttatgtttgatcatgttgcatctaaaaacaattaggattaattgcac |
315 |
Q |
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|||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
32211836 |
tagatgtttt-gagtaacacaatgtagaatcaggaattactaatgtcttttatttatttttgatcatgttgcatctaaaaacaattaggattaattgcac |
32211738 |
T |
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| Q |
316 |
ttttttggtcttcttattttcaatagttcatggtattggtcttccctttttaaaattcaattttttggtccctcactcatatttttgaacccaaaatgat |
415 |
Q |
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|||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |
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| T |
32211737 |
---tttggtctccttattttcaatagtttatggtattggtcttccctttttaaaattcaattttttggtccctcactcatatttttggacccaaagtgat |
32211641 |
T |
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