View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19382_high_44 (Length: 358)
Name: NF19382_high_44
Description: NF19382
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19382_high_44 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 338; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 338; E-Value: 0
Query Start/End: Original strand, 1 - 358
Target Start/End: Original strand, 4345979 - 4346336
Alignment:
| Q |
1 |
atgaaatcgaattaacacgccgccttcccgtcatgattacatgaaagtactttgagttggcatcacaatcttgtaaccataataaccgcgactgttgccg |
100 |
Q |
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| T |
4345979 |
atgaaatcgaattaacacgccaccttcccgtcatgactacatgaaagtactttgagttgacatcacaatcttgtaaccataataaccgcgactgttggca |
4346078 |
T |
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| Q |
101 |
agagatactagaggacaaccgagataaagaatgcatatcaagagtattacttcgcaaatcatatagttcctccgctgtcaaagcattttgttccgccttt |
200 |
Q |
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| T |
4346079 |
agagatactagaggacaaccgagataaagaatgcatatcaagagtattacttcgcaaatcatatagttcctccgctgtcaaagcattttgttccgccttt |
4346178 |
T |
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| Q |
201 |
ttatccaacatatgacatgctctttaatggcctgaattctcccaggtaagtttctgacatgagtactgtgcactctttcagatcaaatttaatcttcctt |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4346179 |
ttatccaacatatgacatgctctttaatggcctgaattctcccaggtaagtttctgacatgagtactgtgcactctttcagatcaaatttaatcttcctt |
4346278 |
T |
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| Q |
301 |
aatttttcttgcaagacaaaaccgccccacccttgaaagtccatagccctccactttt |
358 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4346279 |
aatttttcttgcaagacaaaaccgccccacccttgaaagtccatagccctccactttt |
4346336 |
T |
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