View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19382_high_46 (Length: 355)
Name: NF19382_high_46
Description: NF19382
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19382_high_46 |
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Alignment Details
Target: chr4 (Bit Score: 311; Significance: 1e-175; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 19 - 345
Target Start/End: Original strand, 41122387 - 41122713
Alignment:
| Q |
19 |
gttgatccacagggaaaaccttaagtgagcaaattattctatgtttttctggccaattggttaagattacgtgtatcattttatttcaaattcaagaatc |
118 |
Q |
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| T |
41122387 |
gttgatccacagggaaaaccttaagtgagcaaattattctatgtttttctggccaattggttaagatcatgtgtatcattttatttcaaattcaagaatc |
41122486 |
T |
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| Q |
119 |
aagattattttaattctttaatggtatctttctttgttttttggtatattcagctgtatctttctctcagtgtatggtgtatattgcgatataagaaatt |
218 |
Q |
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| T |
41122487 |
aagattattttaattctttagtggtatctttctttgttttttggtatattcagctgtatctttctctcagtgtatggtgtatattgcgatataagaaatt |
41122586 |
T |
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| Q |
219 |
aaagggaaaccatttttacatcattataagttgtatagtttagatttggcctctattttgcaatgccaagttacttgcttatagtgcatgcttacaacga |
318 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41122587 |
aaagggaaaccattgttacatcattataagttgtatagtttagatttggcctctattttgcaatgccaagttacttgcttatagtgcatgcttacaacga |
41122686 |
T |
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| Q |
319 |
ataaggttgtatgattgtagtagaatt |
345 |
Q |
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||||||||||||||||||||||||||| |
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| T |
41122687 |
ataaggttgtatgattgtagtagaatt |
41122713 |
T |
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