View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19382_high_64 (Length: 284)
Name: NF19382_high_64
Description: NF19382
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19382_high_64 |
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Alignment Details
Target: chr1 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 12 - 265
Target Start/End: Complemental strand, 51426738 - 51426485
Alignment:
| Q |
12 |
aagaacatacaaacatggtcaaagtggtggtaattttaataatgtttaaaaatggtggttctcgcaaatgtttgtcgaagtggtgatcagtggtggttgg |
111 |
Q |
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| T |
51426738 |
aagaacatacaaacatggtcaaagtggtggtaattttaataatgtttgaaaatggtggttctcgcaaatgtttgtcgaagtggtgatcagtggtggttgg |
51426639 |
T |
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| Q |
112 |
cgatcaccgcagtggttggtaatgtggtagttggtggtgatggatggcagacagagtgagtaatagtcaatgtggtgaatggtggtgatttttggtggtc |
211 |
Q |
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| T |
51426638 |
cggtcgccgcagtggttggtaatgtggtagttggtggtgatggatggcagacagagtgagtagtagtcaatgtggtgaatggtggtgatttttggtggtc |
51426539 |
T |
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| Q |
212 |
ggagtagtggctagagtggtggtaggattgttaattgcaggtggatgaagtggt |
265 |
Q |
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| T |
51426538 |
ggagtagtggctagagtggtggtaggattgttgattgcaggtggatgaagtggt |
51426485 |
T |
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