View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19382_high_66 (Length: 282)

Name: NF19382_high_66
Description: NF19382
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19382_high_66
NF19382_high_66
[»] chr6 (32 HSPs)
chr6 (1-264)||(23498507-23498770)
chr6 (9-248)||(19958397-19958636)
chr6 (1-248)||(23500227-23500472)
chr6 (4-248)||(31736192-31736435)
chr6 (6-248)||(28946775-28947016)
chr6 (33-248)||(6084080-6084294)
chr6 (21-242)||(25602012-25602233)
chr6 (1-185)||(32261628-32261816)
chr6 (20-242)||(19233848-19234072)
chr6 (1-248)||(17757341-17757587)
chr6 (21-248)||(22555455-22555690)
chr6 (65-207)||(20412392-20412536)
chr6 (9-182)||(21680989-21681163)
chr6 (112-234)||(18981894-18982016)
chr6 (11-248)||(23017690-23017934)
chr6 (53-184)||(18327142-18327271)
chr6 (112-248)||(35055802-35055936)
chr6 (123-238)||(30674731-30674847)
chr6 (6-102)||(18458718-18458814)
chr6 (117-207)||(27127115-27127207)
chr6 (117-248)||(10444687-10444816)
chr6 (194-248)||(18458653-18458707)
chr6 (119-197)||(1642246-1642326)
chr6 (117-248)||(29043796-29043925)
chr6 (184-238)||(31347206-31347260)
chr6 (11-137)||(13763127-13763255)
chr6 (199-248)||(18451635-18451684)
chr6 (121-207)||(19830611-19830699)
chr6 (194-245)||(3008229-3008280)
chr6 (194-248)||(13803130-13803184)
chr6 (180-242)||(22212891-22212956)
chr6 (87-137)||(29417809-29417859)
[»] chr1 (42 HSPs)
chr1 (1-248)||(17904615-17904862)
chr1 (9-248)||(7322268-7322507)
chr1 (1-248)||(13301305-13301552)
chr1 (6-248)||(51322838-51323080)
chr1 (6-248)||(14794026-14794267)
chr1 (57-248)||(21238284-21238474)
chr1 (9-248)||(24721334-24721574)
chr1 (11-248)||(45753961-45754199)
chr1 (11-248)||(42696213-42696452)
chr1 (9-248)||(44890842-44891083)
chr1 (57-248)||(28478185-28478376)
chr1 (4-207)||(1641795-1641997)
chr1 (86-242)||(39051845-39052003)
chr1 (86-248)||(18120021-18120185)
chr1 (65-248)||(24725873-24726060)
chr1 (9-248)||(45473469-45473709)
chr1 (113-238)||(21350833-21350958)
chr1 (1-207)||(24724192-24724399)
chr1 (20-248)||(6832614-6832841)
chr1 (87-248)||(51475400-51475565)
chr1 (11-248)||(12359660-12359900)
chr1 (11-207)||(22348864-22349060)
chr1 (117-207)||(7053702-7053795)
chr1 (113-248)||(35892994-35893127)
chr1 (1-88)||(8647142-8647229)
chr1 (117-207)||(48300196-48300288)
chr1 (117-248)||(12709102-12709231)
chr1 (112-248)||(34391511-34391646)
chr1 (117-175)||(20635345-20635406)
chr1 (194-248)||(20709369-20709423)
chr1 (187-248)||(21190700-21190761)
chr1 (6-62)||(21225139-21225195)
chr1 (117-175)||(42911223-42911284)
chr1 (115-148)||(4597736-4597769)
chr1 (199-248)||(28453148-28453197)
chr1 (180-247)||(41230255-41230326)
chr1 (65-136)||(19762472-19762542)
chr1 (117-207)||(38058241-38058327)
chr1 (163-248)||(12712719-12712804)
chr1 (112-141)||(16080994-16081023)
chr1 (1-58)||(19674872-19674929)
chr1 (191-242)||(22901091-22901143)
[»] scaffold0445 (1 HSPs)
scaffold0445 (1-242)||(3289-3529)
[»] chr7 (66 HSPs)
chr7 (1-248)||(48809781-48810027)
chr7 (1-248)||(19558641-19558888)
chr7 (1-248)||(48218075-48218322)
chr7 (1-248)||(22001562-22001809)
chr7 (1-248)||(4070219-4070466)
chr7 (1-248)||(15138578-15138825)
chr7 (6-248)||(15105463-15105704)
chr7 (1-248)||(16075572-16075819)
chr7 (6-248)||(15623478-15623720)
chr7 (1-248)||(8136405-8136652)
chr7 (1-248)||(17131061-17131308)
chr7 (1-248)||(15280746-15280993)
chr7 (6-248)||(9744707-9744950)
chr7 (1-248)||(11053130-11053378)
chr7 (11-248)||(32997116-32997355)
chr7 (1-248)||(10660572-10660823)
chr7 (6-248)||(13134469-13134712)
chr7 (65-246)||(36706217-36706402)
chr7 (6-248)||(20254156-20254401)
chr7 (9-248)||(43746847-43747087)
chr7 (86-245)||(4692164-4692325)
chr7 (4-248)||(37785855-37786102)
chr7 (57-220)||(14154404-14154567)
chr7 (4-207)||(14220600-14220802)
chr7 (9-213)||(19194544-19194749)
chr7 (65-207)||(13151219-13151363)
chr7 (65-248)||(15120854-15121043)
chr7 (65-248)||(12370583-12370772)
chr7 (112-242)||(24271194-24271324)
chr7 (65-248)||(11065712-11065905)
chr7 (65-248)||(36686803-36686991)
chr7 (65-248)||(44373228-44373417)
chr7 (65-248)||(44382084-44382273)
chr7 (86-248)||(13700259-13700427)
chr7 (112-248)||(33557515-33557649)
chr7 (115-248)||(20618576-20618716)
chr7 (1-158)||(47093428-47093586)
chr7 (112-248)||(9255521-9255655)
chr7 (112-248)||(9314595-9314729)
chr7 (113-248)||(13317263-13317396)
chr7 (116-248)||(18569455-18569585)
chr7 (115-197)||(3286398-3286479)
chr7 (113-248)||(37537855-37537988)
chr7 (115-207)||(15719213-15719307)
chr7 (187-248)||(18985746-18985807)
chr7 (187-248)||(19000374-19000435)
chr7 (115-207)||(20584579-20584673)
chr7 (117-247)||(15172187-15172316)
chr7 (87-137)||(15212715-15212765)
chr7 (67-188)||(32435128-32435250)
chr7 (187-248)||(42567020-42567081)
chr7 (200-248)||(15578275-15578323)
chr7 (117-164)||(19281076-19281126)
chr7 (143-238)||(25940879-25940974)
chr7 (112-248)||(38293933-38294067)
chr7 (194-248)||(10663939-10663993)
chr7 (199-241)||(11314612-11314654)
chr7 (87-137)||(13254542-13254592)
chr7 (87-137)||(14189953-14190003)
chr7 (87-137)||(14192732-14192782)
chr7 (200-248)||(21659974-21660022)
chr7 (112-151)||(30236574-30236614)
chr7 (194-248)||(36302141-36302194)
chr7 (87-137)||(48742478-48742528)
chr7 (199-248)||(8932038-8932087)
chr7 (199-236)||(33059262-33059299)
[»] chr5 (39 HSPs)
chr5 (1-248)||(21619379-21619626)
chr5 (6-242)||(20199043-20199279)
chr5 (9-248)||(20470445-20470684)
chr5 (1-245)||(25251215-25251460)
chr5 (1-245)||(25315000-25315245)
chr5 (9-222)||(18743471-18743683)
chr5 (1-244)||(29913783-29914022)
chr5 (6-248)||(8505217-8505459)
chr5 (6-248)||(12354470-12354710)
chr5 (112-248)||(6552165-6552301)
chr5 (9-248)||(26748448-26748688)
chr5 (26-248)||(8834666-8834889)
chr5 (86-248)||(10952564-10952730)
chr5 (112-242)||(22110349-22110479)
chr5 (20-242)||(16605689-16605913)
chr5 (11-182)||(16226302-16226473)
chr5 (6-248)||(16062035-16062276)
chr5 (1-248)||(26645934-26646181)
chr5 (89-207)||(20564803-20564921)
chr5 (112-207)||(23203429-23203527)
chr5 (65-207)||(26760707-26760851)
chr5 (117-206)||(31621652-31621741)
chr5 (116-248)||(26766154-26766284)
chr5 (113-248)||(14027357-14027490)
chr5 (184-248)||(21419511-21419575)
chr5 (117-207)||(21407218-21407310)
chr5 (87-137)||(22358956-22359006)
chr5 (87-137)||(23537573-23537623)
chr5 (199-248)||(12354052-12354101)
chr5 (187-248)||(30609770-30609830)
chr5 (189-248)||(21402333-21402391)
chr5 (199-246)||(21403302-21403349)
chr5 (11-137)||(22468981-22469109)
chr5 (191-242)||(16256851-16256903)
chr5 (191-242)||(16260445-16260497)
chr5 (191-242)||(22590570-22590622)
chr5 (191-242)||(22594125-22594177)
chr5 (191-242)||(22597680-22597732)
chr5 (180-248)||(33896714-33896781)
[»] chr2 (41 HSPs)
chr2 (1-248)||(18391622-18391869)
chr2 (6-242)||(44070994-44071230)
chr2 (1-248)||(27851067-27851314)
chr2 (7-248)||(25138283-25138525)
chr2 (6-245)||(22258403-22258642)
chr2 (1-248)||(22671026-22671276)
chr2 (1-248)||(3538239-3538486)
chr2 (22-248)||(27859803-27860029)
chr2 (10-248)||(1385375-1385614)
chr2 (1-248)||(10744774-10745022)
chr2 (1-222)||(5984615-5984836)
chr2 (1-248)||(27039549-27039801)
chr2 (65-248)||(25044553-25044740)
chr2 (4-248)||(19357279-19357527)
chr2 (9-248)||(21337260-21337503)
chr2 (117-248)||(44761633-44761764)
chr2 (65-248)||(24782506-24782695)
chr2 (88-248)||(18389812-18389976)
chr2 (36-248)||(10898365-10898582)
chr2 (89-246)||(14692810-14692970)
chr2 (112-248)||(21317270-21317409)
chr2 (65-197)||(25084695-25084829)
chr2 (65-248)||(5032969-5033161)
chr2 (187-248)||(25588132-25588193)
chr2 (116-248)||(36737430-36737560)
chr2 (187-245)||(14181034-14181092)
chr2 (117-248)||(19197060-19197189)
chr2 (22-247)||(22685158-22685382)
chr2 (129-248)||(22678293-22678415)
chr2 (117-197)||(23759890-23759972)
chr2 (117-197)||(24514523-24514605)
chr2 (11-137)||(26895407-26895535)
chr2 (117-175)||(36838462-36838522)
chr2 (116-207)||(17305764-17305857)
chr2 (113-248)||(28346619-28346752)
chr2 (187-240)||(19644416-19644469)
chr2 (11-137)||(21244913-21245041)
chr2 (184-248)||(36733277-36733341)
chr2 (87-137)||(19803277-19803327)
chr2 (87-137)||(22702252-22702302)
chr2 (194-248)||(30212775-30212829)
[»] scaffold0056 (2 HSPs)
scaffold0056 (1-248)||(65484-65731)
scaffold0056 (86-248)||(14890-15054)
[»] chr8 (55 HSPs)
chr8 (6-248)||(22319271-22319513)
chr8 (1-248)||(17908249-17908496)
chr8 (1-248)||(31724533-31724781)
chr8 (1-197)||(22333762-22333957)
chr8 (9-248)||(18820676-18820917)
chr8 (1-248)||(45471764-45472008)
chr8 (11-248)||(23946773-23947011)
chr8 (1-248)||(23888212-23888457)
chr8 (1-248)||(5079380-5079627)
chr8 (9-248)||(6574555-6574795)
chr8 (109-248)||(20025568-20025707)
chr8 (1-248)||(36729336-36729584)
chr8 (1-248)||(19664268-19664516)
chr8 (1-248)||(17217071-17217318)
chr8 (1-248)||(22243889-22244136)
chr8 (1-248)||(12799884-12800131)
chr8 (1-248)||(25849812-25850064)
chr8 (109-248)||(38987828-38987967)
chr8 (109-248)||(39018925-39019064)
chr8 (1-248)||(22585051-22585300)
chr8 (11-248)||(23417839-23418080)
chr8 (9-238)||(17979935-17980165)
chr8 (1-248)||(39696160-39696410)
chr8 (57-242)||(22343497-22343682)
chr8 (57-242)||(22355157-22355342)
chr8 (112-248)||(22480516-22480652)
chr8 (122-247)||(21512823-21512948)
chr8 (1-137)||(6103368-6103504)
chr8 (65-248)||(8694-8875)
chr8 (1-182)||(20453500-20453680)
chr8 (65-248)||(21398483-21398670)
chr8 (65-248)||(21792976-21793163)
chr8 (109-245)||(2718283-2718417)
chr8 (65-248)||(20180102-20180291)
chr8 (11-207)||(42267182-42267378)
chr8 (8-107)||(20047884-20047982)
chr8 (113-248)||(12038519-12038652)
chr8 (112-248)||(21684040-21684174)
chr8 (112-248)||(21688389-21688523)
chr8 (122-248)||(21677669-21677793)
chr8 (117-207)||(18303467-18303560)
chr8 (112-248)||(20518541-20518675)
chr8 (113-248)||(36406828-36406961)
chr8 (113-248)||(36734081-36734213)
chr8 (11-137)||(41682441-41682569)
chr8 (11-144)||(19878576-19878711)
chr8 (112-248)||(20878257-20878391)
chr8 (116-248)||(23885136-23885266)
chr8 (117-207)||(45118642-45118734)
chr8 (87-137)||(19881325-19881375)
chr8 (194-248)||(22709347-22709401)
chr8 (202-248)||(22615871-22615917)
chr8 (87-137)||(24977513-24977563)
chr8 (187-248)||(38050054-38050115)
chr8 (191-242)||(17614099-17614151)
[»] scaffold0002 (2 HSPs)
scaffold0002 (1-248)||(127923-128170)
scaffold0002 (65-248)||(397042-397229)
[»] chr3 (60 HSPs)
chr3 (1-248)||(13178818-13179065)
chr3 (1-248)||(17259485-17259731)
chr3 (1-248)||(16058685-16058932)
chr3 (7-248)||(16043832-16044073)
chr3 (6-248)||(6145419-6145661)
chr3 (15-248)||(16049316-16049549)
chr3 (1-248)||(15024885-15025134)
chr3 (1-248)||(50352501-50352747)
chr3 (1-248)||(17206304-17206552)
chr3 (11-248)||(8492788-8493026)
chr3 (1-248)||(20416606-20416853)
chr3 (20-242)||(45804744-45804965)
chr3 (24-248)||(54331930-54332155)
chr3 (20-248)||(11561426-11561655)
chr3 (1-248)||(35066148-35066400)
chr3 (11-183)||(16727669-16727841)
chr3 (35-248)||(12513452-12513668)
chr3 (65-248)||(22308220-22308409)
chr3 (11-248)||(53647456-53647700)
chr3 (1-248)||(19574169-19574417)
chr3 (65-248)||(42327865-42328054)
chr3 (6-223)||(16180857-16181075)
chr3 (57-238)||(1209333-1209514)
chr3 (145-248)||(12563824-12563927)
chr3 (87-248)||(19569830-19569994)
chr3 (1-248)||(17668584-17668830)
chr3 (1-248)||(12860691-12860918)
chr3 (65-248)||(14440332-14440519)
chr3 (135-248)||(11190968-11191081)
chr3 (11-178)||(9643728-9643895)
chr3 (91-248)||(12507423-12507583)
chr3 (115-248)||(14523711-14523842)
chr3 (112-248)||(48629966-48630100)
chr3 (117-248)||(12918951-12919080)
chr3 (113-248)||(29930914-29931047)
chr3 (113-248)||(29980068-29980201)
chr3 (187-248)||(3161924-3161985)
chr3 (118-248)||(12539806-12539934)
chr3 (115-248)||(14251285-14251425)
chr3 (115-248)||(25200601-25200731)
chr3 (87-158)||(3265752-3265822)
chr3 (52-150)||(12559450-12559547)
chr3 (117-197)||(41174191-41174273)
chr3 (117-197)||(50349658-50349740)
chr3 (87-142)||(36527054-36527109)
chr3 (117-207)||(42355356-42355448)
chr3 (87-137)||(16326270-16326320)
chr3 (187-248)||(50756894-50756955)
chr3 (116-207)||(10561978-10562068)
chr3 (117-207)||(45533260-45533352)
chr3 (194-248)||(19165307-19165361)
chr3 (187-248)||(3528772-3528833)
chr3 (9-73)||(11189695-11189760)
chr3 (1-57)||(19573129-19573185)
chr3 (121-175)||(44268777-44268834)
chr3 (87-137)||(1990220-1990270)
chr3 (194-247)||(6001897-6001950)
chr3 (112-141)||(17684222-17684251)
chr3 (112-141)||(22643948-22643977)
chr3 (117-164)||(14154309-14154359)
[»] scaffold0113 (1 HSPs)
scaffold0113 (1-218)||(31049-31265)
[»] scaffold1212 (1 HSPs)
scaffold1212 (6-248)||(264-505)
[»] scaffold0227 (1 HSPs)
scaffold0227 (7-248)||(27302-27542)
[»] scaffold0063 (2 HSPs)
scaffold0063 (14-246)||(72589-72820)
scaffold0063 (20-247)||(61029-61258)
[»] scaffold0037 (1 HSPs)
scaffold0037 (1-248)||(113952-114199)
[»] scaffold0004 (5 HSPs)
scaffold0004 (1-248)||(108697-108944)
scaffold0004 (187-248)||(64667-64728)
scaffold0004 (112-248)||(74044-74178)
scaffold0004 (199-248)||(72176-72225)
scaffold0004 (1-58)||(330284-330341)
[»] scaffold0017 (2 HSPs)
scaffold0017 (1-248)||(24882-25129)
scaffold0017 (187-248)||(22404-22465)
[»] chr4 (42 HSPs)
chr4 (6-248)||(26923043-26923285)
chr4 (1-248)||(44025050-44025297)
chr4 (1-161)||(16027674-16027834)
chr4 (1-248)||(46225904-46226153)
chr4 (1-248)||(21061013-21061259)
chr4 (11-248)||(32467561-32467800)
chr4 (20-243)||(35658954-35659176)
chr4 (65-248)||(10357973-10358162)
chr4 (9-248)||(46739453-46739692)
chr4 (112-248)||(14628779-14628915)
chr4 (112-248)||(55581810-55581946)
chr4 (117-248)||(20123-20256)
chr4 (11-244)||(14184173-14184405)
chr4 (1-248)||(15607775-15608027)
chr4 (20-248)||(25505971-25506200)
chr4 (33-140)||(14187733-14187841)
chr4 (9-192)||(30139093-30139277)
chr4 (22-171)||(42876461-42876611)
chr4 (115-248)||(45315673-45315804)
chr4 (112-248)||(10282636-10282770)
chr4 (112-248)||(13163652-13163786)
chr4 (112-248)||(10271914-10272048)
chr4 (4-142)||(19733695-19733832)
chr4 (189-248)||(12621865-12621924)
chr4 (117-207)||(37017877-37017966)
chr4 (180-247)||(15364588-15364657)
chr4 (117-197)||(25089920-25090002)
chr4 (189-248)||(14476369-14476428)
chr4 (117-207)||(16295872-16295964)
chr4 (87-137)||(4829202-4829252)
chr4 (87-137)||(4832497-4832547)
chr4 (87-137)||(4835792-4835842)
chr4 (9-73)||(17957753-17957818)
chr4 (187-248)||(19567442-19567503)
chr4 (117-151)||(40228863-40228897)
chr4 (115-175)||(16996793-16996856)
chr4 (87-144)||(33185081-33185138)
chr4 (184-248)||(9621164-9621227)
chr4 (192-245)||(14157392-14157446)
chr4 (192-245)||(14164097-14164151)
chr4 (87-137)||(15989067-15989117)
chr4 (187-248)||(17957929-17957990)
[»] scaffold0859 (1 HSPs)
scaffold0859 (1-248)||(3184-3429)
[»] scaffold0371 (1 HSPs)
scaffold0371 (6-236)||(14054-14283)
[»] scaffold0261 (1 HSPs)
scaffold0261 (14-248)||(7766-8000)
[»] scaffold0028 (1 HSPs)
scaffold0028 (23-248)||(4347-4571)
[»] scaffold0010 (1 HSPs)
scaffold0010 (1-248)||(127738-127986)
[»] scaffold0042 (2 HSPs)
scaffold0042 (65-248)||(27828-28012)
scaffold0042 (11-179)||(48143-48311)
[»] scaffold0505 (1 HSPs)
scaffold0505 (1-248)||(3163-3410)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-248)||(94755-95003)
[»] scaffold0054 (1 HSPs)
scaffold0054 (9-250)||(66669-66911)
[»] scaffold0439 (1 HSPs)
scaffold0439 (58-248)||(2803-2992)
[»] scaffold0090 (1 HSPs)
scaffold0090 (86-248)||(16855-17017)
[»] scaffold0321 (1 HSPs)
scaffold0321 (65-248)||(1314-1501)
[»] scaffold0178 (1 HSPs)
scaffold0178 (6-182)||(666-843)
[»] scaffold0453 (1 HSPs)
scaffold0453 (1-248)||(6246-6494)
[»] scaffold0589 (1 HSPs)
scaffold0589 (21-248)||(2844-3072)
[»] scaffold0520 (1 HSPs)
scaffold0520 (6-248)||(756-998)
[»] scaffold0401 (1 HSPs)
scaffold0401 (55-248)||(7267-7460)
[»] scaffold0220 (1 HSPs)
scaffold0220 (1-248)||(16920-17169)
[»] scaffold0108 (1 HSPs)
scaffold0108 (9-248)||(8479-8719)
[»] scaffold0213 (1 HSPs)
scaffold0213 (109-248)||(17572-17711)
[»] scaffold0083 (2 HSPs)
scaffold0083 (65-248)||(7547-7732)
scaffold0083 (144-181)||(25324-25361)
[»] scaffold0742 (1 HSPs)
scaffold0742 (109-242)||(2470-2603)
[»] scaffold0112 (1 HSPs)
scaffold0112 (113-242)||(1376-1505)
[»] scaffold0011 (1 HSPs)
scaffold0011 (123-248)||(39186-39311)
[»] scaffold0645 (1 HSPs)
scaffold0645 (20-248)||(1040-1269)
[»] scaffold0048 (1 HSPs)
scaffold0048 (121-248)||(55449-55576)
[»] scaffold0231 (1 HSPs)
scaffold0231 (9-248)||(19379-19617)
[»] scaffold0059 (1 HSPs)
scaffold0059 (112-242)||(48669-48799)
[»] scaffold1256 (2 HSPs)
scaffold1256 (112-248)||(929-1065)
scaffold1256 (6-47)||(1120-1161)
[»] scaffold0005 (1 HSPs)
scaffold0005 (112-248)||(188468-188604)
[»] scaffold0075 (2 HSPs)
scaffold0075 (117-248)||(59822-59955)
scaffold0075 (11-197)||(3932-4121)
[»] scaffold0241 (2 HSPs)
scaffold0241 (4-248)||(704-951)
scaffold0241 (65-207)||(4273-4415)
[»] scaffold1243 (1 HSPs)
scaffold1243 (86-248)||(776-942)
[»] scaffold0462 (1 HSPs)
scaffold0462 (65-248)||(5194-5383)
[»] scaffold0382 (1 HSPs)
scaffold0382 (65-248)||(15892-16081)
[»] scaffold0100 (2 HSPs)
scaffold0100 (113-241)||(27984-28112)
scaffold0100 (116-242)||(10545-10671)
[»] scaffold0007 (3 HSPs)
scaffold0007 (9-238)||(17675-17906)
scaffold0007 (119-234)||(19275-19390)
scaffold0007 (187-248)||(83330-83391)
[»] scaffold0328 (1 HSPs)
scaffold0328 (1-178)||(17498-17675)
[»] scaffold0036 (1 HSPs)
scaffold0036 (65-248)||(78934-79123)
[»] scaffold0628 (1 HSPs)
scaffold0628 (7-248)||(5106-5339)
[»] scaffold0509 (1 HSPs)
scaffold0509 (65-188)||(10413-10538)
[»] scaffold0285 (1 HSPs)
scaffold0285 (130-242)||(18360-18472)
[»] scaffold0174 (3 HSPs)
scaffold0174 (113-248)||(3464-3599)
scaffold0174 (113-248)||(9586-9721)
scaffold0174 (113-248)||(14565-14698)
[»] scaffold0001 (4 HSPs)
scaffold0001 (65-248)||(31280-31469)
scaffold0001 (65-248)||(36587-36776)
scaffold0001 (115-247)||(443201-443332)
scaffold0001 (88-137)||(391301-391350)
[»] scaffold0125 (2 HSPs)
scaffold0125 (1-248)||(24003-24248)
scaffold0125 (194-248)||(43907-43961)
[»] scaffold0375 (1 HSPs)
scaffold0375 (65-248)||(9957-10146)
[»] scaffold0123 (1 HSPs)
scaffold0123 (117-248)||(15381-15509)
[»] scaffold0230 (2 HSPs)
scaffold0230 (53-184)||(17084-17213)
scaffold0230 (180-245)||(8277-8342)
[»] scaffold0529 (1 HSPs)
scaffold0529 (65-196)||(6714-6845)
[»] scaffold0117 (2 HSPs)
scaffold0117 (83-207)||(41894-42015)
scaffold0117 (112-248)||(22844-22980)
[»] scaffold0577 (1 HSPs)
scaffold0577 (11-158)||(6851-6999)
[»] scaffold0394 (1 HSPs)
scaffold0394 (112-248)||(8660-8795)
[»] scaffold0035 (2 HSPs)
scaffold0035 (112-245)||(44922-45053)
scaffold0035 (112-248)||(40339-40473)
[»] scaffold0420 (1 HSPs)
scaffold0420 (117-207)||(15116-15205)
[»] scaffold0148 (1 HSPs)
scaffold0148 (113-248)||(7623-7756)
[»] scaffold1815 (1 HSPs)
scaffold1815 (117-207)||(292-385)
[»] scaffold0205 (1 HSPs)
scaffold0205 (116-248)||(6960-7090)
[»] scaffold0121 (1 HSPs)
scaffold0121 (187-248)||(18772-18833)
[»] scaffold0092 (1 HSPs)
scaffold0092 (194-248)||(39022-39076)
[»] scaffold0058 (1 HSPs)
scaffold0058 (187-248)||(60979-61040)
[»] scaffold0065 (1 HSPs)
scaffold0065 (155-248)||(53915-54010)
[»] scaffold0066 (1 HSPs)
scaffold0066 (87-137)||(47448-47498)
[»] scaffold0217 (1 HSPs)
scaffold0217 (187-248)||(27468-27529)
[»] scaffold0301 (2 HSPs)
scaffold0301 (117-164)||(10172-10222)
scaffold0301 (117-175)||(9662-9723)
[»] scaffold0630 (2 HSPs)
scaffold0630 (117-195)||(1013-1094)
scaffold0630 (117-195)||(7179-7260)
[»] scaffold1716 (1 HSPs)
scaffold1716 (113-248)||(1111-1246)
[»] scaffold0379 (2 HSPs)
scaffold0379 (187-248)||(9135-9196)
scaffold0379 (187-248)||(16327-16388)
[»] scaffold0051 (1 HSPs)
scaffold0051 (65-127)||(69270-69331)
[»] scaffold0116 (1 HSPs)
scaffold0116 (112-141)||(33718-33747)
[»] scaffold0021 (1 HSPs)
scaffold0021 (109-137)||(145316-145344)
[»] scaffold0016 (1 HSPs)
scaffold0016 (11-55)||(171295-171339)


Alignment Details
Target: chr6 (Bit Score: 256; Significance: 1e-142; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 23498770 - 23498507
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23498770 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgga 23498671  T
Q  101 aaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcg 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  23498670 aaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaactcacttcaacagctattcttggttacctgcgcg 23498571  T
Q  201 ttacccacgtagaggcaacattccaccagaaggggtgagatttcacataaacaacataaacaac 264  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  23498570 ttacccacgtagaggcaacattccaccaaaaggggtgagatttcacataaacaacataaacaac 23498507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 9 - 248
Target Start/End: Complemental strand, 19958636 - 19958397
Alignment:
Q  9 aatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaagt 108  Q
    |||||||||| |||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  19958636 aatggcacaacggcctcaacataaacaacttattaaactccattctagatggttcatcaacataaaatcatagcaattacgtaacacatggaaaacaagt 19958537  T
Q  109 aagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccac 208  Q
    |||||  ||||||||||| |||||||||||||||||||| |||||||||||||||||| ||||||||||| ||| ||  ||||| ||||  |||||||||    
T  19958536 aagatatccatcccgttatgtatcagagcgaccctaagatgacgcgtgagagagtcaactcacttcaacaactaatccaggttatctgcatgttacccac 19958437  T
Q  209 gtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  19958436 gtagaggcaacattcaaacagaaggggtgagatttcacat 19958397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 23500227 - 23500472
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgga 100  Q
    |||| ||||||||||||| |||||||||||| ||||||||||||| |||| | ||| |||| ||||||||||||||||||  ||| ||||||||||||||    
T  23500227 aacaacgtaatggcacaacggcctcaacataaacaacttattaaactccattataggtggtccatcaacataaaatcataggaat-acgtaacacatgga 23500325  T
Q  101 aaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcg 200  Q
    ||||||| ||| |||  ||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||| |||| ||    
T  23500326 aaacaagcaagttccttatcccgt-acgtatcagagcgaccctaagacgacacgtgagagagtcaactcacttcaacagctattcctggttatctgcacg 23500424  T
Q  201 ttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||    
T  23500425 ttacccacgtagaggcaacattcaaacagaaggggtgagatttcacat 23500472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 4 - 248
Target Start/End: Complemental strand, 31736435 - 31736192
Alignment:
Q  4 atcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaa 103  Q
    ||||||||| ||||| ||||||||| || ||||||||||||||| || |||||     || |  ||||||||||||| ||||||||||||||||||||||    
T  31736435 atcgtaatgacacaacggcctcaacttaaacaacttattaaaattcagtctaggcaaatctttgacataaaatcataacaattacgtaacacatggaaaa 31736336  T
Q  104 caagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgtta 203  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||| |||| |||||||| |||| |||||    
T  31736335 caagtaaggtccccatcccgttacgtatcagtgcgaccctaagacgacgcgtgagagagtc-actcacttcaacacctatccttggttatctgcacgtta 31736237  T
Q  204 cccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||||||||||||||||| | ||||||||||||||||||||||    
T  31736236 cccacgtagaggcaacattcaaacagaaggggtgagatttcacat 31736192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 6 - 248
Target Start/End: Original strand, 28946775 - 28947016
Alignment:
Q  6 cgtaatggcacaatggcctcaacatagacaacttattaaaat-ccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaac 104  Q
    |||| ||||||||  ||||||||||| ||||||||||||||| ||| ||||   ||||||||||||||||||||||  ||| ||||||||||||||||||    
T  28946775 cgtagtggcacaacagcctcaacata-acaacttattaaaattccattctaaggggttcatcaacataaaatcatagaaat-acgtaacacatggaaaac 28946872  T
Q  105 aagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttac 204  Q
    ||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||| |||||  || ||| |||| | ||||    
T  28946873 aagcaagatccccatcccgttacgtatcagagcgactctaagacgacgtgtgagagagtcaactcacttcaacaactattactgattatctgcaccttac 28946972  T
Q  205 ccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||||||||| | ||||||||||||||||||||||    
T  28946973 ccacgtagaggcaacattcaaacagaaggggtgagatttcacat 28947016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 33 - 248
Target Start/End: Complemental strand, 6084294 - 6084080
Alignment:
Q  33 acaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaa-gtaagatccccatcccgttacgtat 131  Q
    ||||||||||||| |||||||||   |||||||||||||||| |||||  ||| |||||||||||||||||||| | ||||||| ||||| |||||||||    
T  6084294 acaacttattaaattccaatctaaggggttcatcaacataaa-tcatagaaat-acgtaacacatggaaaacaaagcaagatcctcatcctgttacgtat 6084197  T
Q  132 cagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagaggcaacattccaccagaa 231  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| |  |||||| |||| ||||||||||||||||||||||||| | |||||    
T  6084196 cagagcgaccctaagacgacgcgtgagagagtcaactcacttcaacagctaattctggttatctgcacgttacccacgtagaggcaacattcaaacagaa 6084097  T
Q  232 ggggtgagatttcacat 248  Q
    |||||||||||||||||    
T  6084096 ggggtgagatttcacat 6084080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 21 - 242
Target Start/End: Complemental strand, 25602233 - 25602012
Alignment:
Q  21 gcctcaacatagacaacttattaaaat-ccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaa-gtaagatcccca 118  Q
    ||||||||||| ||||||||||||||| ||| ||||| ||||||||||||||||| |||||  ||| |||||||||||||||||||| | ||||||||||    
T  25602233 gcctcaacataaacaacttattaaaattccattctaggtggttcatcaacataaa-tcataagaat-acgtaacacatggaaaacaaagcaagatcccca 25602136  T
Q  119 tcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagaggcaa 218  Q
    || ||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||| || |||||| |||| ||||||||| ||||||||||    
T  25602135 tctcgttatgtatcagagcgaccctaagacgacgcgtgagagagtcaactcgcttcaacagctaatcctggttatctgcacgttacccatgtagaggcaa 25602036  T
Q  219 cattccaccagaaggggtgagatt 242  Q
    ||||| | || |||||||||||||    
T  25602035 cattcaaacataaggggtgagatt 25602012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 32261816 - 32261628
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaat----ccaatctagatggttcatcaacataaaatcatatcaattacgtaacaca 96  Q
    |||| ||||||||||||| | |||||||||| |||||||||||||||     |||||||| || |||||||||||||||||||| ||||||| |||||||    
T  32261816 aacaacgtaatggcacaacgacctcaacataaacaacttattaaaattcaatcaatctaggtgattcatcaacataaaatcatagcaattacataacaca 32261717  T
Q  97 tggaaaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattc 185  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||   ||||||||| ||||||    
T  32261716 tggaaaacaagtaagatctccatcctgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaaccgacttcaacatctattc 32261628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 20 - 242
Target Start/End: Original strand, 19233848 - 19234072
Alignment:
Q  20 ggcctcaacatagacaacttattaaaa--tccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaa--gtaagatcc 115  Q
    |||||||||||| ||||||| ||||||  |||| | || |||||||||||||||||  |||||  ||| |||||||| ||| |||||||  | || ||||    
T  19233848 ggcctcaacataaacaacttcttaaaaattccattttaaatggttcatcaacataat-tcataataat-acgtaacaaatgaaaaacaatagaaatatcc 19233945  T
Q  116 ccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagagg 215  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||| || |||||| |||| |||||||||||||||||    
T  19233946 ccatcctgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaactcacatcagcagctaatcctggttatctgcacgttacccacgtagagg 19234045  T
Q  216 caacattccaccagaaggggtgagatt 242  Q
    |||||||||| ||||| ||||||||||    
T  19234046 caacattccaacagaatgggtgagatt 19234072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 17757587 - 17757341
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaat-tacgtaacacatgg 99  Q
    ||||| ||||||||| |||||||||||| | ||||||||||||||||||| ||||| |   || |||||||||||||||| |||  ||| ||| ||||||    
T  17757587 aacattgtaatggcataatggcctcaacttcgacaacttattaaaatccagtctaggtaaatcttcaacataaaatcataacaaaatacataagacatgg 17757488  T
Q  100 aaaacaagtaagatccccatcccgttacgtatcagagcgac-cctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcg 198  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||||| || |   || |||| |||| ||| | | || || | |||| ||||     
T  17757487 aaaacaagtaagatccccatcctgttacgtatcagagcgactcctaagacgacacgag---gaatcaactcacatcagcggttactcctagttatctgca 17757391  T
Q  199 cgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||||||||||||||| | ||||||||||||||||| ||||    
T  17757390 cgttacccacgtagaggcaacattcaaacagaaggggtgagattttacat 17757341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 21 - 248
Target Start/End: Original strand, 22555455 - 22555690
Alignment:
Q  21 gcctcaacatagacaacttattaaaatccaat-ctagatggttcatcaacataaaatcatatcaat-tacgtaacacatggaaaacaa---------gta 109  Q
    |||| |||||| ||||||||||||||| |||| |||| ||||||||||||||||  |||||  ||| ||||||||| |||||||||||         | |    
T  22555455 gccttaacataaacaacttattaaaattcaattctaggtggttcatcaacataat-tcata--aatatacgtaacaaatggaaaacaatgcaaagatgaa 22555551  T
Q  110 agatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacg 209  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||| |  || ||| ||||  ||||||||||    
T  22555552 agatccccatcccgttacgtatcagagcgaccctaagacgacgcatgagagagtcaactcacatcaacagctaattctgattatctgcatgttacccacg 22555651  T
Q  210 tagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||||||||||| | ||||||||||||||||||||||    
T  22555652 tagaggcaacattcaaacagaaggggtgagatttcacat 22555690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 65 - 207
Target Start/End: Complemental strand, 20412536 - 20412392
Alignment:
Q  65 tcaacataaaatcatatcaattacgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacg---cgtgagaga 161  Q
    |||||||||||||||  ||| ||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||   |||||||||    
T  20412536 tcaacataaaatcatgacaaatacgtaagacatggaaaacaagcaa-atccccatcccgttacgtatcagagcgaccctaagacgacgacacgtgagaga 20412438  T
Q  162 gtcaattcacttcaacagctattcttggttacctgcgcgttaccca 207  Q
    ||||  ||||||||||| ||||||||| || |||||  ||||||||    
T  20412437 gtcatctcacttcaacaactattcttgatttcctgcaagttaccca 20412392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 9 - 182
Target Start/End: Complemental strand, 21681163 - 21680989
Alignment:
Q  9 aatggcacaatggcctcaacatagacaacttattaaaat-ccaatctagatggttcatcaacataaaatcatatcaat-tacgtaacacatggaaaacaa 106  Q
    |||||||| | |||||||||||| ||||||||||||||| ||| ||||| ||||||||||||||||  |||||  ||| ||||||||| |||||||||||    
T  21681163 aatggcactacggcctcaacataaacaacttattaaaattccattctaggtggttcatcaacataat-tcata--aatatacgtaacaaatggaaaacaa 21681067  T
Q  107 gt--aagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagcta 182  Q
        |||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||| |||| ||||||||||    
T  21681066 tgcaaagatccccatccccttacgtatcagagagaccctaagacgacgtgtgagagagtcaactcacatcaacagcta 21680989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 112 - 234
Target Start/End: Original strand, 18981894 - 18982016
Alignment:
Q  112 atccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgta 211  Q
    |||||||||||||||||||||||| ||||| |||||||||| ||||||||||||| |||| ||| || ||| || |||||| |||| | |||||||||||    
T  18981894 atccccatcccgttacgtatcagaacgaccgtaagacgacgtgtgagagagtcaactcacatcagcaactaatcctggttatctgcacattacccacgta 18981993  T
Q  212 gaggcaacattccaccagaaggg 234  Q
    |||||||||||| | ||||||||    
T  18981994 gaggcaacattcaaacagaaggg 18982016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 248
Target Start/End: Complemental strand, 23017934 - 23017690
Alignment:
Q  11 tggcacaatggcctcaacatagacaactta-ttaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaagta 109  Q
    ||||||||||||| |||| || |||||||| |||||||||||| || |     | ||||| |||||||||   || |||||||||||||||||||||| |    
T  23017934 tggcacaatggccgcaacttaaacaacttaattaaaatccaatttaaacaaaacttcaacgtaaaatcatgataaatacgtaacacatggaaaacaagca 23017835  T
Q  110 agatccccatcccgttacgtatcagagcgaccctaagacgacg---cgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttaccc 206  Q
    | ||||||||||| |||| |||||||||| |||||||||||||   |||||||||||||  ||||||||||| ||||||||| ||  ||||  |||||||    
T  23017834 a-atccccatcccattacatatcagagcgtccctaagacgacgacacgtgagagagtcatctcacttcaacaactattcttgattttctgcaagttaccc 23017736  T
Q  207 a--cgtagaggcaacatt--ccaccagaaggggtgagatttcacat 248  Q
    |   ||| ||||||||||  | | ||||||||||||||||||||||    
T  23017735 aattgtaaaggcaacatttccaagcagaaggggtgagatttcacat 23017690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 53 - 184
Target Start/End: Original strand, 18327142 - 18327271
Alignment:
Q  53 ctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaa-gtaagatccccatcccgttacgtatcagagcgaccctaagacgac 151  Q
    |||| ||||||||||||||||  |||||  ||| |||||||||||||||||||| | ||||||| ||||||||||||||||||||| ||| ||||| |||    
T  18327142 ctaggtggttcatcaacataa--tcataaaaat-acgtaacacatggaaaacaaagcaagatcctcatcccgttacgtatcagagcaaccttaagatgac 18327238  T
Q  152 gcgtgagagagtcaattcacttcaacagctatt 184  Q
    ||||||||||||||| |||| ||  ||||||||    
T  18327239 gcgtgagagagtcaactcacatccgcagctatt 18327271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 112 - 248
Target Start/End: Original strand, 35055802 - 35055936
Alignment:
Q  112 atccccatcccgttacgtatcagagcgac-cctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgt 210  Q
    |||| |||||||||||||||||||||||| ||||||||||| || |   || |||| |||| ||| | | || || |||||| |||| ||||||||||||    
T  35055802 atccacatcccgttacgtatcagagcgactcctaagacgacacgag---gaatcaactcacatcagcggttactcctggttatctgcacgttacccacgt 35055898  T
Q  211 agaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||| | ||||||||||||||||||||||    
T  35055899 agaggcaacattcaaacagaaggggtgagatttcacat 35055936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 123 - 238
Target Start/End: Complemental strand, 30674847 - 30674731
Alignment:
Q  123 gttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtaga-ggcaacat 221  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||| | | |||||| || | |||| |||| |||||||||| |||| ||||||||    
T  30674847 gttacgtatcagagcgaccataagacgacgcgtgagagagtcaactcacattagcagctaatcattgttatctgcacgttacccacatagagggcaacat 30674748  T
Q  222 tccaccagaaggggtga 238  Q
    || | ||||| ||||||    
T  30674747 tcaaacagaatgggtga 30674731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 102
Target Start/End: Complemental strand, 18458814 - 18458718
Alignment:
Q  6 cgtaatggcacaatggcctcaacatagacaacttattaaaat-ccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaa 102  Q
    ||||||||||||| ||||| |||||| |||||||||| |||| ||| ||||| |||||||||||||||||||||||  || ||||| |||||||||||    
T  18458814 cgtaatggcacaacggccttaacataaacaacttattgaaattccattctaggtggttcatcaacataaaatcata-gaaatacgtgacacatggaaa 18458718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 117 - 207
Target Start/End: Complemental strand, 27127207 - 27127115
Alignment:
Q  117 catcccgttacgtatcagagcgaccctaagacgacg---cgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttaccca 207  Q
    |||||||||||||||||||| |||||||||||||||   |||||||||||| | ||||||||| ||||| ||||| ||||||||  ||||||||    
T  27127207 catcccgttacgtatcagagtgaccctaagacgacggcacgtgagagagtctactcacttcaa-agctaatcttgattacctgcaagttaccca 27127115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 117 - 248
Target Start/End: Original strand, 10444687 - 10444816
Alignment:
Q  117 catcccgttacgtatcagagcgac-cctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagagg 215  Q
    |||||||||||||||||||||||| ||||| ||||| || |   || |||| |||| ||| | | || |  |||||| |||| |||||||||||||||||    
T  10444687 catcccgttacgtatcagagcgactcctaaaacgacacgag---gaatcaactcacatcagcggttacttatggttatctgcacgttacccacgtagagg 10444783  T
Q  216 caacattccaccagaaggggtgagatttcacat 248  Q
    |||||||| | ||||||||||||||| ||||||    
T  10444784 caacattcaaacagaaggggtgagatctcacat 10444816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 194 - 248
Target Start/End: Complemental strand, 18458707 - 18458653
Alignment:
Q  194 ctgcgcgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||| ||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  18458707 ctgcacgttacccacgtagaggcaacattcaaacagaaggggtgagatttcacat 18458653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 197
Target Start/End: Original strand, 1642246 - 1642326
Alignment:
Q  119 tcccgttacgtatcagagcgaccctaagacgacg---cgtgagagagtcaattcacttcaacagctattcttggttacctgc 197  Q
    ||||||||||||||||||||||||||||||||||   |||||||||||| ||||||| | ||| ||| ||||| ||||||||    
T  1642246 tcccgttacgtatcagagcgaccctaagacgacgacacgtgagagagtcgattcactac-acaactaatcttgattacctgc 1642326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 117 - 248
Target Start/End: Original strand, 29043796 - 29043925
Alignment:
Q  117 catcccgttacgtatcagagcgac-cctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagagg 215  Q
    ||||| |||||||||||||||||| |||||||||||  | |   || ||||||| | ||| | | || || |||||| |||| |||||||||||||||||    
T  29043796 catcctgttacgtatcagagcgactcctaagacgacaagag---gaatcaattcgcatcagcggttactcatggttatctgcacgttacccacgtagagg 29043892  T
Q  216 caacattccaccagaaggggtgagatttcacat 248  Q
    |||||||| | ||||| | ||||||||||||||    
T  29043893 caacattcaaacagaatgagtgagatttcacat 29043925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 31347260 - 31347206
Alignment:
Q  184 tcttggttacctgcgcgttacccacgtagaggcaacattccaccagaaggggtga 238  Q
    ||||||||| |||| ||||||||||||||||||||||||| | ||||||||||||    
T  31347260 tcttggttatctgcacgttacccacgtagaggcaacattcaaacagaaggggtga 31347206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 137
Target Start/End: Original strand, 13763127 - 13763255
Alignment:
Q  11 tggcacaatggcctcaacatagacaacttattaaaa-tccaatctagatggttcatcaacataaaa-tcata-tcaattacgtaacacatggaaaacaag 107  Q
    |||||||| ||||||||| || |||||||| ||||| |||| |||| |  || | ||||||||||| ||||| | ||| |||||||| |||||||||||     
T  13763127 tggcacaacggcctcaacttaaacaacttaataaaaatccagtctaaacagt-cttcaacataaaagtcataataaatcacgtaacatatggaaaacaat 13763225  T
Q  108 taagatccccatcccgttacgtatcagagc 137  Q
     ||||||||||||| |||||||||||||||    
T  13763226 aaagatccccatcctgttacgtatcagagc 13763255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 248
Target Start/End: Original strand, 18451635 - 18451684
Alignment:
Q  199 cgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||||||||||||||| | |||||||| |||||||||||||    
T  18451635 cgttacccacgtagaggcaacattcaaacagaagggctgagatttcacat 18451684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 121 - 207
Target Start/End: Complemental strand, 19830699 - 19830611
Alignment:
Q  121 ccgttacgtatcagagcgaccctaa---gacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttaccca 207  Q
    |||||||||||||||||| ||||||   |||||| |||||||||||| | ||||||| ||||||| ||||| ||||||||  ||||||||    
T  19830699 ccgttacgtatcagagcggccctaagatgacgacacgtgagagagtcgactcacttc-acagctaatcttgattacctgcaagttaccca 19830611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 245
Target Start/End: Complemental strand, 3008280 - 3008229
Alignment:
Q  194 ctgcgcgttacccacgtagaggcaacattccaccagaaggggtgagatttca 245  Q
    |||| ||||||||||||||||| ||||||| | ||||| |||||||||||||    
T  3008280 ctgcacgttacccacgtagaggtaacattcaaacagaatgggtgagatttca 3008229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 248
Target Start/End: Complemental strand, 13803184 - 13803130
Alignment:
Q  194 ctgcgcgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||| ||||||| ||||||||| ||||||| | ||||| ||||||||||||||||    
T  13803184 ctgcacgttaccgacgtagaggtaacattcaaacagaaagggtgagatttcacat 13803130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 242
Target Start/End: Complemental strand, 22212956 - 22212891
Alignment:
Q  180 ctattcttggttacctgcgcgttacccac-gtagaggcaacatt--ccaccagaaggggtgagatt 242  Q
    ||||||||||||||||||  ||||||||| ||||||||||||||  | | ||||||||||||||||    
T  22212956 ctattcttggttacctgcaagttacccacggtagaggcaacatttccaagcagaaggggtgagatt 22212891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 29417859 - 29417809
Alignment:
Q  87 acgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagc 137  Q
    |||||||| |||||||||||  ||||| | |||||||||||||||||||||    
T  29417859 acgtaacatatggaaaacaataaagattctcatcccgttacgtatcagagc 29417809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 180; Significance: 3e-97; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 17904862 - 17904615
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgga 100  Q
    |||| ||||||||||||| |||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  17904862 aacaacgtaatggcacaacggcctcaacataaacaacttattaaactccattctagatggttcatcaacataaaatcatagcaattacgtaacacatgga 17904763  T
Q  101 aaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcg 200  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| || |||||| |||| ||    
T  17904762 aaacaagtaagatcttcatcccgttacgtatcagagcgaccctaagacgacgtgtgagagagtcaactcacttcaacagctaatcctggttatctgcacg 17904663  T
Q  201 ttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||||||||||||| | ||||||||||| ||||||||||    
T  17904662 ttacccacgtagaggcaacattcaaacagaaggggtgggatttcacat 17904615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 9 - 248
Target Start/End: Complemental strand, 7322507 - 7322268
Alignment:
Q  9 aatggcacaatggcctcaacatagacaacttattaaaat-ccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaag 107  Q
    |||||||| | |||||||||||| ||||||||||||||| ||| ||||| |||||||||||||||||||||||  ||| | |||||||||||||||||||    
T  7322507 aatggcactacggcctcaacataaacaacttattaaaattccattctaggtggttcatcaacataaaatcatagaaat-aggtaacacatggaaaacaag 7322409  T
Q  108 taagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttaccca 207  Q
     |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| |||||||||||||||||| |||||| |||| |||||||||    
T  7322408 caagatccccatcccgttacgtatcagagtgaccctaagacgtcgcgtgagagagtcaactcacttcaacagctattcctggttatctgcacgttaccca 7322309  T
Q  208 cgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||||||||||||| | ||||||||||||||||||||||    
T  7322308 cgtagaggcaacattcaaacagaaggggtgagatttcacat 7322268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 13301305 - 13301552
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgga 100  Q
    |||| ||||||| ||||| | |||||||||| ||||||||||||| | ||  |||||||||||||||||||||||||||| |||||||||||||||||||    
T  13301305 aacaacgtaatgacacaacgacctcaacataaacaacttattaaacttcatcctagatggttcatcaacataaaatcatagcaattacgtaacacatgga 13301404  T
Q  101 aaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcg 200  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||| |||||| |||| ||    
T  13301405 aaacaagtaagatctccatcccgttacgtatcagagcgaccctaagacgatgcgtgagagagtcaactcacttcaacaactattcctggttatctgcacg 13301504  T
Q  201 ttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
     |||||||||||| | ||||||| | ||||| ||||||||||||||||    
T  13301505 gtacccacgtagatgaaacattcaaacagaatgggtgagatttcacat 13301552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 6 - 248
Target Start/End: Original strand, 51322838 - 51323080
Alignment:
Q  6 cgtaatggcacaatggcctcaacatagacaacttattaaaat-ccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaac 104  Q
    ||||||||||||| |||||||||||| ||||||||||||||| ||| ||||| | ||||||||||||||| ||||   ||| | ||||||||||||||||    
T  51322838 cgtaatggcacaaaggcctcaacataaacaacttattaaaattccattctaggttgttcatcaacataaa-tcatgaaaat-atgtaacacatggaaaac 51322935  T
Q  105 aa-gtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgtta 203  Q
    || | | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| || |||||| |||| |||||    
T  51322936 aaagcatgatccccatcccgttacgtatcagagcgaccctaagacgacgcgtaagagagtcaactcacttcaacagctaatcctggttatctgcacgtta 51323035  T
Q  204 cccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||||||||||||||||| | ||||||||||||||||||||||    
T  51323036 cccacgtagaggcaacattcaaacagaaggggtgagatttcacat 51323080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 6 - 248
Target Start/End: Complemental strand, 14794267 - 14794026
Alignment:
Q  6 cgtaatggcacaatggcctcaacatagacaacttattaaaatc-caatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaac 104  Q
    ||||||||||||| |||||||||||| |||||||||||||||  || ||||| ||||||||||||||||| |||||  ||| ||||||||||||||||||    
T  14794267 cgtaatggcacaacggcctcaacataaacaacttattaaaatttcattctaggtggttcatcaacataaa-tcataaaaat-acgtaacacatggaaaac 14794170  T
Q  105 aagt-aagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgtta 203  Q
    ||   ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||| || |||||| |||| |||||    
T  14794169 aaaacaagatccccatcccgttacatatcagagcgaccctaagacg-cgcgtgagagagtcaactcacttcaacagctaatcctggttatctgcacgtta 14794071  T
Q  204 cccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
     ||||||||||||||||||| | ||||| ||||||||||||||||    
T  14794070 tccacgtagaggcaacattcaaacagaaagggtgagatttcacat 14794026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 57 - 248
Target Start/End: Original strand, 21238284 - 21238474
Alignment:
Q  57 atggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtg 156  Q
    ||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||| ||    
T  21238284 atggttcatcaacataaaatcatagaaat-acgtaacacatggaaaacaagtaagatccccatcctgttacgtgtcaaagcgaccctaagacgacgcatg 21238382  T
Q  157 agagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||||||| |||||||||||||||||| |||||| |||| ||||||||||||||||||||||||| | || ||||| |||||||||||||    
T  21238383 agagagtcaactcacttcaacagctattcctggttatctgcacgttacccacgtagaggcaacattcaaacataagggttgagatttcacat 21238474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 9 - 248
Target Start/End: Complemental strand, 24721574 - 24721334
Alignment:
Q  9 aatggcacaatggcctcaacatagacaacttattaaaatccaat-ctagatggttcatcaacataaaatcatatcaat-tacgtaacacatggaaaacaa 106  Q
    |||||||| | |||||||||||| ||||||||||||||| | || |||| ||||||||||||||||  |||||  ||| ||||||||| |||||||||||    
T  24721574 aatggcactacggcctcaacataaacaacttattaaaattctattctaggtggttcatcaacataat-tcata--aatatacgtaacaaatggaaaacaa 24721478  T
Q  107 gt--aagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttac 204  Q
        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||| |  |||||| |||| ||||||    
T  24721477 tgcaaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaactcacataaacagctaattctggttatctgcacgttac 24721378  T
Q  205 ccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||||||||| | |||||| |||||||||||||||    
T  24721377 ccacgtagaggcaacattcaaacagaagaggtgagatttcacat 24721334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 11 - 248
Target Start/End: Original strand, 45753961 - 45754199
Alignment:
Q  11 tggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaagtaa 110  Q
    |||||||| ||||||||| ||  |||||||||| || ||| | ||||   ||| ||||||||||||||||  || ||||||||||||| |||||||| ||    
T  45753961 tggcacaacggcctcaacttaagcaacttattagaacccagtttagacaattcttcaacataaaatcataataaatacgtaacacatgaaaaacaagcaa 45754060  T
Q  111 gatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggtt-acctgcgcgttacccacg 209  Q
    ||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||| |||| || | |||| |||||||||||    
T  45754061 gatcctcatcctgttacgtatcagagcgaccctaagacgacacgtgagagagtcaactcacttcaacaactatccttgattaatctgcacgttacccacg 45754160  T
Q  210 tagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||||||||||| | | ||||||||| ||||||||||    
T  45754161 tagaggcaacattcaaactgaaggggtgtgatttcacat 45754199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 11 - 248
Target Start/End: Original strand, 42696213 - 42696452
Alignment:
Q  11 tggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaagtaa 110  Q
    |||||||| ||||||||| || |||||||||||||||||| | || |    || ||||||||||||||||  || ||| ||||||||| |||||||  ||    
T  42696213 tggcacaacggcctcaacttaaacaacttattaaaatccagtttaaacaaatcttcaacataaaatcataataaatacataacacatgaaaaacaaacaa 42696312  T
Q  111 gatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgt 210  Q
     ||||||| ||| |||||||||||||||||||||||||||| |||||||||| ||| |||||||||||||||| |||| ||||||||  |||||||||||    
T  42696313 aatccccaccccattacgtatcagagcgaccctaagacgacacgtgagagagacaactcacttcaacagctatccttgattacctgcaagttacccacgt 42696412  T
Q  211 agaggcaacatt--ccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||  | | |||||||||| |||||| ||||    
T  42696413 agaggcaacatttccaagcagaaggggtcagattttacat 42696452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 9 - 248
Target Start/End: Original strand, 44890842 - 44891083
Alignment:
Q  9 aatggcacaatggcctcaacatagacaacttattaaaa--tccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaa 106  Q
    |||||||| | |||||||||||| ||||||| ||||||  |||| |  | |||||||||||| ||||| | |||  ||| |||||||| |||||||||||    
T  44890842 aatggcactacggcctcaacataaacaacttcttaaaaattccatttcaaatggttcatcaatataaa-taataataat-acgtaacaaatggaaaacaa 44890939  T
Q  107 gt--aagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttac 204  Q
        || ||  ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| || |||||| |||| ||||||    
T  44890940 cacaaatatgtccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaactcacatcaacagctaatcctggttatctgcacgttac 44891039  T
Q  205 ccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||||||||| | || ||| |||||||||||||||    
T  44891040 ccacgtagaggcaacattcaaacataagaggtgagatttcacat 44891083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 57 - 248
Target Start/End: Complemental strand, 28478376 - 28478185
Alignment:
Q  57 atggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaagt--aagatccccatcccgttacgtatcagagcgaccctaagacgacgcg 154  Q
    |||||||||||||||||| | |||  ||| |||||||| |||||||||||    |||||| ||||||||||||||||||||| |||||||||||||||||    
T  28478376 atggttcatcaacataaa-taataataat-acgtaacaaatggaaaacaacacaaagatctccatcccgttacgtatcagagtgaccctaagacgacgcg 28478279  T
Q  155 tgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||||||||| |||| |||||||||| |  ||||||  |||  |||||||||||||||||||||||| | ||||||||||||||||||||||    
T  28478278 tgagagagtcaactcacatcaacagctaattctggttatatgcatgttacccacgtagaggcaacattcaaacagaaggggtgagatttcacat 28478185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 4 - 207
Target Start/End: Original strand, 1641795 - 1641997
Alignment:
Q  4 atcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaa 103  Q
    ||||||||||||||| ||| | ||| || |||||||||||||||||| ||||||    || |||||||||| |||||  ||  |||||||||||||||||    
T  1641795 atcgtaatggcacaacggcattaacttaaacaacttattaaaatccagtctagacaaatcttcaacataaattcataataaacacgtaacacatggaaaa 1641894  T
Q  104 caagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgtta 203  Q
    |||  |||||||||||||||||||||||||||| |||||||||||||| ||||| |||||| | |||||||||||||||  |||| ||||||||  ||||    
T  1641895 caaacaagatccccatcccgttacgtatcagagtgaccctaagacgacacgtgaaagagtc-actcacttcaacagctaaccttgattacctgcaagtta 1641993  T
Q  204 ccca 207  Q
    ||||    
T  1641994 ccca 1641997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 86 - 242
Target Start/End: Original strand, 39051845 - 39052003
Alignment:
Q  86 tacgtaacacatggaaaacaagt--aagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctat 183  Q
    ||||||||| |||||||||||    || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||| ||||||     
T  39051845 tacgtaacaaatggaaaacaatacaaatatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagggagtcaactcacatcagcagctaa 39051944  T
Q  184 tcttggttacctgcgcgttacccacgtagaggcaacattccaccagaaggggtgagatt 242  Q
    || ||||||  ||| ||||||||||||||||||||||||| | ||||||||||||||||    
T  39051945 tcctggttatttgcacgttacccacgtagaggcaacattcaaacagaaggggtgagatt 39052003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 86 - 248
Target Start/End: Original strand, 18120021 - 18120185
Alignment:
Q  86 tacgtaacacatggaaaacaagt--aagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctat 183  Q
    ||||||||| |||||||||||    || |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| |  ||| ||||||     
T  18120021 tacgtaacaaatggaaaacaacacaaatatcctcatcccgttacgtatcatagcgaccctaagacgacgcgtgagagagtcaattgatatcagcagctaa 18120120  T
Q  184 tcttggttacctgcgcgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    || |||||| |||| |||||||||||||||| |||||||| | ||||||||||||||||||||||    
T  18120121 tcctggttatctgcacgttacccacgtagagacaacattcaaacagaaggggtgagatttcacat 18120185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 65 - 248
Target Start/End: Original strand, 24725873 - 24726060
Alignment:
Q  65 tcaacataaaatcatatcaattacgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacg---cgtgagaga 161  Q
    |||||||||||||||   || |||||||||||||||||||||  || ||| ||||||||||||||||||||||||||||||||||||    |||||||||    
T  24725873 tcaacataaaatcatgataaatacgtaacacatggaaaacaaacaa-atctccatcccgttacgtatcagagcgaccctaagacgacaacacgtgagaga 24725971  T
Q  162 gtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagaggcaacatt--ccaccagaaggggtgagatttcacat 248  Q
    |||   ||||||||||| ||||| ||| ||||||||  |||||||||||||||||||||||  | | |||||||||||| |||||||||    
T  24725972 gtcgtctcacttcaacaactatttttgattacctgcaagttacccacgtagaggcaacatttccaaacagaaggggtgaaatttcacat 24726060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 9 - 248
Target Start/End: Original strand, 45473469 - 45473709
Alignment:
Q  9 aatggcacaatggcctcaacatagacaacttattaaaatccaat-ctagatggttcatcaacataaaatcatatcaat-tacgtaacacatggaaaacaa 106  Q
    |||||||| | |||||||||||| ||||||||||||||| | || |||| ||||||||||| ||||  |||||  ||| || |||||| ||| ||||||     
T  45473469 aatggcactacggcctcaacataaacaacttattaaaattctattctaggtggttcatcaaaataat-tcata--aatatatgtaacaaatgaaaaaca- 45473564  T
Q  107 gt---aagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgtta 203  Q
    ||   ||||||| |||||| ||||||||||||||||||||||||| ||| ||||||||||||| |||| |||||| ||| |  || ||| |||| |||||    
T  45473565 gtgcaaagatccacatcccattacgtatcagagcgaccctaagacaacgtgtgagagagtcaactcacatcaacaactaattctgattatctgcacgtta 45473664  T
Q  204 cccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||| |||||||| | ||||||||||||||||||||||    
T  45473665 cccacgtagagacaacattcaaacagaaggggtgagatttcacat 45473709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 113 - 238
Target Start/End: Complemental strand, 21350958 - 21350833
Alignment:
Q  113 tccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtag 212  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||||||| |||||||| || ||| || |||||| |||| | ||||||||||||    
T  21350958 tccccatcccattacatatcagagcgaccctaagacgacgcgtgagagagtcaactcacttcagcatctaatcctggttatctgcactttacccacgtag 21350859  T
Q  213 aggcaacattccaccagaaggggtga 238  Q
    || |||||||| | ||||||||||||    
T  21350858 agacaacattcaaacagaaggggtga 21350833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 24724399 - 24724192
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttatt-aaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgg 99  Q
    ||||||||  |||||||| | ||||||| || |||||||||| |||||||| |||||||   || |||||||||  ||| |  || |||| |||||||||    
T  24724399 aacatcgtgttggcacaacgacctcaacttaaacaacttatttaaaatccagtctagataaatcttcaacataatttcacaataaatacgcaacacatgg 24724300  T
Q  100 aaaacaagtaagat-ccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcg 198  Q
    |||||||  | ||| ||||||||||||||||||||||||||| |||||||||| |||||||||||| | |||||||||||||||  |||| ||||||||     
T  24724299 aaaacaataaggattccccatcccgttacgtatcagagcgactctaagacgactcgtgagagagtc-actcacttcaacagctaaccttgattacctgca 24724201  T
Q  199 cgttaccca 207  Q
     ||||||||    
T  24724200 agttaccca 24724192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 20 - 248
Target Start/End: Original strand, 6832614 - 6832841
Alignment:
Q  20 ggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaagt--aagatcccc 117  Q
    |||||||||||| ||||||||  ||| |||| |  | |||||||||||||||||  |||||  ||| |||||||| |||||||||||    || ||||||    
T  6832614 ggcctcaacataaacaacttaa-aaattccatttcaaatggttcatcaacataat-tcataataat-acgtaacaaatggaaaacaatacaaatatcccc 6832710  T
Q  118 atcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagaggca 217  Q
    |||  |||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||| | || |||||| ||||  ||||| || |||||||||    
T  6832711 atcttgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaactcacatcagcagccaatcctggttatctgcatgttactcatgtagaggca 6832810  T
Q  218 acattccaccagaaggggtgagatttcacat 248  Q
    |||||| | | |||||||||  |||||||||    
T  6832811 acattcaaaccgaaggggtggaatttcacat 6832841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 87 - 248
Target Start/End: Original strand, 51475400 - 51475565
Alignment:
Q  87 acgtaacacatggaaaacaagtaagatccc-catcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattc 185  Q
    ||||||||||||||||||||| ||||| || ||||||||||||||||||| |||||||| |||||| |||||||||||| | ||||||||||| |||       
T  51475400 acgtaacacatggaaaacaagcaagattcctcatcccgttacgtatcagaacgaccctatgacgacacgtgagagagtc-actcacttcaacaactaact 51475498  T
Q  186 ttggttacctgcgcgttaccca--cgtagaggcaacatt--ccaccagaaggggtgagatttcacat 248  Q
    ||| ||||||||  ||||||||   ||| ||||||||||  | | ||||||||||||||||||||||    
T  51475499 ttgattacctgcaagttacccaattgtaaaggcaacatttccaagcagaaggggtgagatttcacat 51475565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 11 - 248
Target Start/End: Complemental strand, 12359900 - 12359660
Alignment:
Q  11 tggcacaatggcctcaacatagacaacttattaaaa-tccaatctagatggttcatcaacataaaa-tcata-tcaattacgtaacacatggaaaacaag 107  Q
    |||||||| ||||||||| || |||||||| ||||| |||| |||| |  || | ||||||||||| ||||| | ||| |||||||| |||||||||||     
T  12359900 tggcacaacggcctcaacttaaacaacttaataaaaatccagtctaaacagt-cttcaacataaaagtcataataaatcacgtaacatatggaaaacaat 12359802  T
Q  108 taagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttaccca 207  Q
     ||||||||||||| |||||| |||||||||||||| ||||||| |||||| ||||| | |||||||||||||||  |||| ||||||||  ||||||||    
T  12359801 aaagatccccatccagttacgcatcagagcgaccct-agacgacacgtgag-gagtc-actcacttcaacagctaaccttgattacctgcaagttaccca 12359705  T
Q  208 --cgtagaggcaacatt--ccaccagaaggggtgagatttcacat 248  Q
       ||| ||||||||||  | | ||||||||||||||||||||||    
T  12359704 atggtaaaggcaacatttccaagcagaaggggtgagatttcacat 12359660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 207
Target Start/End: Original strand, 22348864 - 22349060
Alignment:
Q  11 tggcacaatggcctcaacatagacaacttatt-aaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaagta 109  Q
    ||||||||  |||||||| || |||||| ||| |||||||| ||||||    || |||||||||  |||||  || |||| ||||||||||||||||  |    
T  22348864 tggcacaacagcctcaacttaaacaactaatttaaaatccagtctagacaaatcttcaacataatttcataataaatacgcaacacatggaaaacaatca 22348963  T
Q  110 agatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttaccca 207  Q
    |||||||| ||  ||||||||||||||||||||||||| ||| |||||||||||| | |||||||||||||||  |||| |||| |||  ||||||||    
T  22348964 agatccccttcatgttacgtatcagagcgaccctaagatgacacgtgagagagtc-actcacttcaacagctaaccttgattacttgcaagttaccca 22349060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 117 - 207
Target Start/End: Complemental strand, 7053795 - 7053702
Alignment:
Q  117 catcccgttacgtatcagagcgaccctaagacgacg---cgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttaccca 207  Q
    |||||||||||||||||||||||||||||||| |||   |||| ||||||||| |||||||||| |||| ||||| ||||||||  ||||||||    
T  7053795 catcccgttacgtatcagagcgaccctaagaccacgatacgtgtgagagtcaactcacttcaacggctaatcttgattacctgcaagttaccca 7053702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 113 - 248
Target Start/End: Original strand, 35892994 - 35893127
Alignment:
Q  113 tccccatcccgttacgtatcagagcgac-cctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgta 211  Q
    |||||||||||||||||||||||||||| ||||||||||| || |   || |||| |||| ||| | | || || |||||| ||||  |||| |||||||    
T  35892994 tccccatcccgttacgtatcagagcgactcctaagacgacacgag---gaatcaactcacatcagcggttactcctggttatctgcatgttatccacgta 35893090  T
Q  212 gaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||||||||| | ||||| ||||||||||||||||    
T  35893091 gaggcaacattcaaacagaacgggtgagatttcacat 35893127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 8647229 - 8647142
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattac 88  Q
    |||| ||||||||||||| |||||||||||| |||||||| || ||| ||| |||| || |||||||||||||| ||||| |||||||    
T  8647229 aacaacgtaatggcacaacggcctcaacataaacaacttaatagaattcaacctaggtgattcatcaacataaattcatagcaattac 8647142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 117 - 207
Target Start/End: Original strand, 48300196 - 48300288
Alignment:
Q  117 catcccgttacgtatcagagcgaccctaagacgacg---cgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttaccca 207  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||||| | ||||||| ||| ||| ||||| ||||||||  ||||||||    
T  48300196 catcccgttacgtatcagagcgaccctaagacgacgacacgtgagagagtcgactcacttc-acaactaatcttgattacctgcaagttaccca 48300288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 117 - 248
Target Start/End: Original strand, 12709102 - 12709231
Alignment:
Q  117 catcccgttacgtatcagagcgac-cctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagagg 215  Q
    |||||||||||||||||||||||| ||||||||||| |  |  |   |||| |||| ||| |||||| || |||||| || | ||||||| || ||||||    
T  12709102 catcccgttacgtatcagagcgactcctaagacgacacaagtaa---tcaactcacatcagcagctaatcctggttatctacacgttaccgacatagagg 12709198  T
Q  216 caacattccaccagaaggggtgagatttcacat 248  Q
    |||||||| | ||||||||||||||||||||||    
T  12709199 caacattcaaacagaaggggtgagatttcacat 12709231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 112 - 248
Target Start/End: Original strand, 34391511 - 34391646
Alignment:
Q  112 atccccatcccgttacgtatcagagcgac-cctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgt 210  Q
    ||||||||||||||||||||||||||||| ||||||| ||| ||  ||  | |||| |||| | | | | || |  |||||| || | ||||||||||||    
T  34391511 atccccatcccgttacgtatcagagcgactcctaagatgacacg--aggaattcaactcacattagcggttacttctggttatcttcacgttacccacgt 34391608  T
Q  211 agaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||| | ||||||||||||||||||||||    
T  34391609 agaggcaacattcaaacagaaggggtgagatttcacat 34391646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 175
Target Start/End: Complemental strand, 20635406 - 20635345
Alignment:
Q  117 catcccgttacgtatcagagcgaccctaagacgacg---cgtgagagagtcaattcacttca 175  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||||| | ||||||||    
T  20635406 catcccgttacgtatcagagcgaccctaagacgacgacacgtgagagagtcgactcacttca 20635345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 248
Target Start/End: Complemental strand, 20709423 - 20709369
Alignment:
Q  194 ctgcgcgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||| ||||||||||||||||| ||||||| | ||||||||||||||||||||||    
T  20709423 ctgcacgttacccacgtagaggtaacattcaaacagaaggggtgagatttcacat 20709369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 248
Target Start/End: Complemental strand, 21190761 - 21190700
Alignment:
Q  187 tggttacctgcgcgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||| ||||  |||||||||||||||||||||||| | |||||||||||| |||||||||    
T  21190761 tggttatctgcatgttacccacgtagaggcaacattcaaacagaaggggtgatatttcacat 21190700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 21225139 - 21225195
Alignment:
Q  6 cgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggtt 62  Q
    ||||||||| ||| ||||||| |||| |||||||||||||||||||||||| |||||    
T  21225139 cgtaatggcccaacggcctcatcataaacaacttattaaaatccaatctaggtggtt 21225195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 175
Target Start/End: Original strand, 42911223 - 42911284
Alignment:
Q  117 catcccgttacgtatcagagcgaccctaa---gacgacgcgtgagagagtcaattcacttca 175  Q
    |||||||||||||||||||| ||||||||   ||||||||||||||||||| | ||||||||    
T  42911223 catcccgttacgtatcagagtgaccctaagacgacgacgcgtgagagagtcgactcacttca 42911284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 148
Target Start/End: Complemental strand, 4597769 - 4597736
Alignment:
Q  115 cccatcccgttacgtatcagagcgaccctaagac 148  Q
    ||||||||||||||||||||||||||||||||||    
T  4597769 cccatcccgttacgtatcagagcgaccctaagac 4597736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 199 - 248
Target Start/End: Original strand, 28453148 - 28453197
Alignment:
Q  199 cgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||||||| ||||||| | || |||||||||||||||||||    
T  28453148 cgttacccacgtagaggtaacattcaaacataaggggtgagatttcacat 28453197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 247
Target Start/End: Original strand, 41230255 - 41230326
Alignment:
Q  180 ctattcttggttacctgcgcgttacccacg--tagaggcaacatt--ccaccagaaggggtgagatttcaca 247  Q
    ||||||||||||||||||  ||||||||||  |||||||||||||  | | |||||||||||||||||||||    
T  41230255 ctattcttggttacctgcaagttacccacgtatagaggcaacatttccaagcagaaggggtgagatttcaca 41230326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 136
Target Start/End: Complemental strand, 19762542 - 19762472
Alignment:
Q  65 tcaacataaaatcatatcaattacgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagag 136  Q
    ||||| ||||||||||  || ||||||||||||||||||| || || || | ||||||||||||||||||||    
T  19762542 tcaacgtaaaatcataataaatacgtaacacatggaaaac-agcaaaattctcatcccgttacgtatcagag 19762472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 117 - 207
Target Start/End: Complemental strand, 38058327 - 38058241
Alignment:
Q  117 catcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttaccca 207  Q
    |||||||||||||||||||||   |||||||| || |||||||||||| | ||||||| ||||||| ||||| ||||||||  ||||||||    
T  38058327 catcccgttacgtatcagagc--acctaagac-acacgtgagagagtcgactcacttc-acagctaatcttgattacctgcaagttaccca 38058241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 248
Target Start/End: Original strand, 12712719 - 12712804
Alignment:
Q  163 tcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||| |||| ||| |||||| || |||||| || | ||||| | || ||||||||| |||| | ||||||||||||||||||||||    
T  12712719 tcaactcacatcagcagctaatcctggttatctacacgttatcgacatagaggcaatattcaaacagaaggggtgagatttcacat 12712804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 16081023 - 16080994
Alignment:
Q  112 atccccatcccgttacgtatcagagcgacc 141  Q
    ||||||||||||||||||||||||||||||    
T  16081023 atccccatcccgttacgtatcagagcgacc 16080994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 19674872 - 19674929
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagat 58  Q
    ||||||||  ||||| |||||||||||  || |||||||||||||||||| |||||||    
T  19674872 aacatcgtgttggcataatggcctcaatttaaacaacttattaaaatccagtctagat 19674929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 242
Target Start/End: Complemental strand, 22901143 - 22901091
Alignment:
Q  191 tacctgcgcgttacccacg-tagaggcaacattccaccagaaggggtgagatt 242  Q
    ||||||| ||||||||||| | |||||||||||| | ||||||||||||||||    
T  22901143 tacctgcacgttacccacggtcgaggcaacattcaaacagaaggggtgagatt 22901091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 178; Significance: 5e-96; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 3529 - 3289
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgga 100  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  3529 aacatcgtaatcgcacaacggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcagttacgtaacacatgga 3430  T
Q  101 aaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcg 200  Q
    ||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||| |||||||| |||| |     
T  3429 aaa-aagtaagatccccatcccgttacgtatcagagcgaccttaagacgacgcatgagagagtcaactcacttcaacagctatccttggttatctgcaca 3331  T
Q  201 ttacccacgtagaggcaacattccaccagaaggggtgagatt 242  Q
    ||||||| ||||||||||||||| |  |||||||||||||||    
T  3330 ttacccatgtagaggcaacattcaaagagaaggggtgagatt 3289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 176; Significance: 7e-95; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 48810027 - 48809781
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgga 100  Q
    |||| ||||||||||||| |||||||||||| ||||||||||||| |||| ||||| |||||||||||||||||||||||  ||| ||||||||||||||    
T  48810027 aacaacgtaatggcacaacggcctcaacataaacaacttattaaactccattctaggtggttcatcaacataaaatcatagaaat-acgtaacacatgga 48809929  T
Q  101 aaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcg 200  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| |||| ||    
T  48809928 aaacaagcaagatccccatcccgttacgtatcagagcgaccctaagacgacacgtgagagagtcaattcacttcaacagctattcctggttatctgcacg 48809829  T
Q  201 ttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||||||||||||| | ||||| ||||||||||||||||    
T  48809828 ttacccacgtagaggcaacattcaaacagaatgggtgagatttcacat 48809781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 19558888 - 19558641
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgga 100  Q
    |||| ||||||| || || |||||||||||| ||||||||||| ||| |||||||| || |||||||||||||||||||| ||||||||||| |||||||    
T  19558888 aacaacgtaatgacagaacggcctcaacataaacaacttattagaattcaatctaggtgattcatcaacataaaatcatagcaattacgtaatacatgga 19558789  T
Q  101 aaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcg 200  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| || ||| |||| ||    
T  19558788 aaacaagtaagatccccatcctgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaactcacttcaacaactattcctgattatctgcacg 19558689  T
Q  201 ttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||    
T  19558688 ttacccacgtagaggcaacattcaaacagaaggggtgagatttcacat 19558641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 48218322 - 48218075
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgga 100  Q
    |||| ||||||||||||| |||| ||||||| ||||||||||||||| |||||||| || |||||||||||||||||||| |||||||||||||||||||    
T  48218322 aacaacgtaatggcacaacggccccaacataaacaacttattaaaattcaatctaggtgattcatcaacataaaatcatagcaattacgtaacacatgga 48218223  T
Q  101 aaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcg 200  Q
    ||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||| |||| |     
T  48218222 aaaaaagtaagatcatcatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaactcacttcaacagctattcctgattatctgcaca 48218123  T
Q  201 ttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||| ||||||||||||||||| | ||||||||||||||||||||||    
T  48218122 ttaccgacgtagaggcaacattcaaacagaaggggtgagatttcacat 48218075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 22001809 - 22001562
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaat-ccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgg 99  Q
    |||| ||||||||||||| |||||||||||| ||||||||||||||| ||| ||||| ||||||||||||||||| |||||  ||| |||||||||||||    
T  22001809 aacaacgtaatggcacaacggcctcaacataaacaacttattaaaattccattctaggtggttcatcaacataaa-tcataagaat-acgtaacacatgg 22001712  T
Q  100 aaaacaa-gtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcg 198  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||| ||||     
T  22001711 aaaacaaagcaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaactcacttcaacagctaatcatggttatctgca 22001612  T
Q  199 cgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  22001611 cgttacccacgtagaggcaacattcaaacagaaggggtgagatttcacat 22001562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 4070219 - 4070466
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgga 100  Q
    |||||||||||||||||| || |||||| || ||||||||||||||| || ||||||    || |||||||||||||||| |||||||||||||||||||    
T  4070219 aacatcgtaatggcacaacggtctcaacttaaacaacttattaaaattcagtctagacaaatcttcaacataaaatcataacaattacgtaacacatgga 4070318  T
Q  101 aaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcg 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||  |||  |    
T  4070319 aaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaactcacttcaacaactatccttggttatatgcaag 4070418  T
Q  201 ttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||||||||||||| | || || ||||||||||||||||    
T  4070419 ttacccacgtagaggcaacattcaaacaaaatgggtgagatttcacat 4070466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 15138578 - 15138825
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaat-ccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgg 99  Q
    |||| |||||||||| || | |||||||||| ||||||||||||||| ||| | ||| |||||||||||||||||||||||  ||| |||||||||||||    
T  15138578 aacaacgtaatggcataacgacctcaacataaacaacttattaaaattccattataggtggttcatcaacataaaatcatagaaat-acgtaacacatgg 15138676  T
Q  100 aaaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgc 199  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||| |||| |    
T  15138677 aaaacaagcaagatcctcatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagttaactcacttcaacagctattcctggttatctgcac 15138776  T
Q  200 gttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||| ||||||||||||||||| | ||||||||||||||||||||||    
T  15138777 gttaccaacgtagaggcaacattcaaacagaaggggtgagatttcacat 15138825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 6 - 248
Target Start/End: Complemental strand, 15105704 - 15105463
Alignment:
Q  6 cgtaatggcacaatggcctcaacatagacaacttattaaaat-ccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaac 104  Q
    ||||||||||||| |||||||||||| ||||||||||||||| ||| | ||| |||||||||||||||||||||||  ||| |||||||||||||||||     
T  15105704 cgtaatggcacaacggcctcaacataaacaacttattaaaattccattataggtggttcatcaacataaaatcatagaaat-acgtaacacatggaaaa- 15105607  T
Q  105 aagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttac 204  Q
    ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| || ||| |||| ||||||    
T  15105606 aagcaagatcctcatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaactcactttaacagctattcctgattatctgcacgttac 15105507  T
Q  205 ccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||| ||||||||||| | ||||||||||||||||||||||    
T  15105506 ccacgtaaaggcaacattcaaacagaaggggtgagatttcacat 15105463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 16075572 - 16075819
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaat-ctagatggttcatcaacataaaatcatatcaattacgtaacacatgg 99  Q
    |||| ||||||||||| | || ||||||||| ||||||||||||||||| || |||| |||||||||||||||||||||||  ||| | |||||||||||    
T  16075572 aacaacgtaatggcacgacggtctcaacataaacaacttattaaaatcccattctaggtggttcatcaacataaaatcatagaaat-atgtaacacatgg 16075670  T
Q  100 aaaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgc 199  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||| |||||  | |||| |||| |    
T  16075671 aaaacaagcaagatccccatcctgttacgtatcagagcgaccctaagacgacgcgtgagggagtcaactcactacaacaactatttcttgttatctgcac 16075770  T
Q  200 gttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||||| ||||||||||||||| | ||||||||||||||||||||||    
T  16075771 gttacccatgtagaggcaacattcaaacagaaggggtgagatttcacat 16075819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 6 - 248
Target Start/End: Original strand, 15623478 - 15623720
Alignment:
Q  6 cgtaatggcacaatggcctcaacatagacaacttattaaaat-ccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaac 104  Q
    ||||||||||||| |||||||||||| ||||||||||||||| ||||||||| |||||||| ||||||||||||||  ||| ||||||||||||||||||    
T  15623478 cgtaatggcacaacggcctcaacataaacaacttattaaaattccaatctaggtggttcataaacataaaatcatagaaat-acgtaacacatggaaaac 15623576  T
Q  105 aagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttac 204  Q
    ||| || ||||||||| |||||||||| |||| ||| |||| || |||| |||||||||||| ||||||||||| |||||| ||||||  ||| ||||||    
T  15623577 aagcaaaatccccatcacgttacgtattagagtgacactaaaacaacgcatgagagagtcaactcacttcaacaactattcctggttatttgcacgttac 15623676  T
Q  205 ccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||| ||||||| |  |||||||||||||||||||||    
T  15623677 ccacgtagaggaaacattcaaatagaaggggtgagatttcacat 15623720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 8136652 - 8136405
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatc-caatctagatggttcatcaacataaaatcatatcaattacgtaacacatgg 99  Q
    |||| ||||||||||||| |||||||||||| |||||||||||||||  || ||||| ||||||||||||||||  |||||  ||| ||||||||||||     
T  8136652 aacaacgtaatggcacaacggcctcaacataaacaacttattaaaattacattctaggtggttcatcaacataag-tcataaaaat-acgtaacacatga 8136555  T
Q  100 aaaacaa-gtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcg 198  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||| | ||||||| || ||||||||||||||| || || ||| || |     
T  8136554 aaaacaaagcaagatccccatcccgttacgtatcagagcgaccctaagacgacgcataagagagtaaactcacttcaacagctaatcatgattatctaca 8136455  T
Q  199 cgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||||||| |||||||||||||| | ||||||||||||||||||||||    
T  8136454 cgttacccacatagaggcaacattcaaacagaaggggtgagatttcacat 8136405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 17131308 - 17131061
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgga 100  Q
    ||||||||  ||||| || ||||||||| || |||||||||||||||||| ||||||   ||| |||||||| |||||||  || ||||||| |||||||    
T  17131308 aacatcgtgttggcataacggcctcaaccta-acaacttattaaaatccagtctagacaattcttcaacatagaatcataataaatacgtaagacatgga 17131210  T
Q  101 aaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcg 200  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||| |||||||||||||  |    
T  17131209 aaacaagcaag-tccccatcccgttacgtatcagagcgaccctaagacgacacgtgagagagtcatctcacttcaacagctatccttggttacctgcaag 17131111  T
Q  201 ttacccacgtagaggcaacatt--ccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||||||||||||  | | ||||| | ||||||||||||||    
T  17131110 ttacccacgtagaggcaacatttccaagcagaatgagtgagatttcacat 17131061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 15280746 - 15280993
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgga 100  Q
    |||||||||||||||||| ||||||||| || |||||||||||||||||| |||||     || ||||||||||  |||| |||||||||||||||||||    
T  15280746 aacatcgtaatggcacaacggcctcaacttaaacaacttattaaaatccagtctaggaaaatcttcaacataaac-cataacaattacgtaacacatgga 15280844  T
Q  101 aaacaagt-aagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttac-ctgcg 198  Q
    ||||| || ||||| |||||||||||| ||||||||| |||||||||||||| |||||||| |||| | ||||||||||||||| |||| |||  ||||     
T  15280845 aaacaggtcaagattcccatcccgttatgtatcagagtgaccctaagacgacacgtgagagtgtcact-cacttcaacagctatccttgattaatctgca 15280943  T
Q  199 cgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||||||||||||||| |||||| | ||||||||||||||||||||||    
T  15280944 cgttacccacgtagaggcgacattcaaacagaaggggtgagatttcacat 15280993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 6 - 248
Target Start/End: Complemental strand, 9744950 - 9744707
Alignment:
Q  6 cgtaatggcacaatggcctcaacatagacaacttattaaaatc-caatctagatggttcatcaacataaaatcatatcaat-tacgtaacacatggaaaa 103  Q
    ||||||||||| | |||||||||||| |||||||||||||||  || ||||| |||||||||| |||||  |||||  ||| ||||||||| ||||||||    
T  9744950 cgtaatggcactacggcctcaacataaacaacttattaaaatttcattctaggtggttcatcagcataat-tcata--aatatacgtaacaaatggaaaa 9744854  T
Q  104 caa-gtaa-gatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgt 201  Q
    ||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||| |||||| |||| |||| ||||| || |||||| |||| |||    
T  9744853 caatgtaaagatctccatcccgttacgtatcagagcgaccctaagacgacgcgtgagatagtcaactcacatcaatagctaatcctggttatctgcacgt 9744754  T
Q  202 tacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||||||| ||||||||||| | ||||||||||||||||||||||    
T  9744753 tacccacgtaaaggcaacattcaaacagaaggggtgagatttcacat 9744707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 11053130 - 11053378
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgga 100  Q
    ||||| |||||||||||| ||||||||| || |||||||||||||||| | | |||     || ||||||||||  |||| |||||||||||||| ||||    
T  11053130 aacattgtaatggcacaacggcctcaacctaaacaacttattaaaatctagtttaggcaaatcttcaacataaac-cataacaattacgtaacacgtgga 11053228  T
Q  101 aaacaagtaa-gatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggtt-acctgcg 198  Q
    |||||||||| ||| ||||| |||||| ||||||||||| |||||||||||| |||||||||||||| |||||||||||||||| |||| || | ||||     
T  11053229 aaacaagtaaagattcccattccgttatgtatcagagcgcccctaagacgacacgtgagagagtcaactcacttcaacagctatccttgattaatctgca 11053328  T
Q  199 cgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
     |||||||||||||||||||||||| | ||||||||||||||||||||||    
T  11053329 tgttacccacgtagaggcaacattcaaacagaaggggtgagatttcacat 11053378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 11 - 248
Target Start/End: Original strand, 32997116 - 32997355
Alignment:
Q  11 tggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaagtaa 110  Q
    |||||||| ||||||||| || |||||||||||||||||| | || |    || |||||||||||||||| ||| |||||||||||||||||||||| |     
T  32997116 tggcacaacggcctcaacttaaacaacttattaaaatccagtttaaacaaatcttcaacataaaatcataacaaatacgtaacacatggaaaacaagcag 32997215  T
Q  111 gatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgt 210  Q
     |||| ||||||||||||||||||||||||||||||   || |||||||||||||| |||||||||||||||| |||| |||||||   |||||||||||    
T  32997216 aatcctcatcccgttacgtatcagagcgaccctaaggaaacacgtgagagagtcaactcacttcaacagctatccttgattacctgtaagttacccacgt 32997315  T
Q  211 agaggcaacattcc--accagaaggggtgagatttcacat 248  Q
    |||||||||||| |  |  |||||||||||||||||||||    
T  32997316 agaggcaacatttccaagtagaaggggtgagatttcacat 32997355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 10660823 - 10660572
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgga 100  Q
    ||||||||  |||||||| ||||||||| || |||||||||||||||||| |||| |    || |||||||||| |||||  || |||||||||||||||    
T  10660823 aacatcgtgttggcacaacggcctcaacttaaacaacttattaaaatccagtctaaacaaatcttcaacataaattcataataaatacgtaacacatgga 10660724  T
Q  101 aaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacg---cgtgagagagtcaattcacttcaacagctattcttggttacctgc 197  Q
    ||||| | || | ||||||| |||||||||||||||||||||||||||||||   |||||||||||||| ||||||||||||||||||||| |||||  |    
T  10660723 aaaca-gcaaaaaccccatctcgttacgtatcagagcgaccctaagacgacgacacgtgagagagtcaactcacttcaacagctattcttgattaccgac 10660625  T
Q  198 gcgttacccacgtagaggcaacatt--ccaccagaaggggtgagatttcacat 248  Q
      |||||||||||||||||||||||  | | ||||||||||||||||||||||    
T  10660624 aagttacccacgtagaggcaacatttccaagcagaaggggtgagatttcacat 10660572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 6 - 248
Target Start/End: Complemental strand, 13134712 - 13134469
Alignment:
Q  6 cgtaatggcacaatggcctcaacatagacaacttattaaaat-ccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaac 104  Q
    ||||||||||| |  | ||||||||| ||||||||||||||| ||| ||||  ||||||||||||||||  |||||  ||| |||||||| |||||||||    
T  13134712 cgtaatggcactacagtctcaacataaacaacttattaaaattccattctacgtggttcatcaacataat-tcataataat-acgtaacaaatggaaaac 13134615  T
Q  105 aagt--aagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgtt 202  Q
    ||    || || | |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| || |||||| |||| ||||    
T  13134614 aacacaaatattctcatcccgttatgtatcagagcgaccctaagacgacgcgtgagagagtcaactcacttcaatagctaatcctggttatctgcacgtt 13134515  T
Q  203 acccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||||||||||| | |||||||||||| |||||||||    
T  13134514 acccacgtagaggcaacattcaaacagaaggggtgaaatttcacat 13134469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 65 - 246
Target Start/End: Complemental strand, 36706402 - 36706217
Alignment:
Q  65 tcaacataaaatcatatcaattacgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacg---cgtgagaga 161  Q
    ||||||||||||||||  || |||||||||||||||||||| | || ||||||||||| |||||||| ||||||||||||||||||||   |||||||||    
T  36706402 tcaacataaaatcataataaatacgtaacacatggaaaaca-gcaaaatccccatccctttacgtatgagagcgaccctaagacgacgacacgtgagaga 36706304  T
Q  162 gtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagaggcaacatt--ccaccagaaggggtgagatttcac 246  Q
    ||||| ||||||||||| ||||||||| ||||||||  |||||||||||||||||||||||  | | |||||||||||||| |||||    
T  36706303 gtcaactcacttcaacaactattcttgattacctgcaagttacccacgtagaggcaacatttccaagcagaaggggtgagaattcac 36706217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 6 - 248
Target Start/End: Complemental strand, 20254401 - 20254156
Alignment:
Q  6 cgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaaca 105  Q
    ||||||||||||| |||||||||||| |||||||||||||||   ||  |  ||||||||||||||||  |||||  ||| |||||||| |||||||| |    
T  20254401 cgtaatggcacaacggcctcaacataaacaacttattaaaatttcattcaattggttcatcaacataat-tcataataat-acgtaacaaatggaaaaaa 20254304  T
Q  106 agt--aagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgtta 203  Q
    |    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| || |||||||||||  ||||    
T  20254303 atacaaatatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaactcacatcaacagctaatcctggttacctgcaagtta 20254204  T
Q  204 cccacgtagaggcaaca--ttc-caccagaaggggtgagatttcacat 248  Q
    |||| | | ||||||||  |||  | ||||||||||||||||||||||    
T  20254203 cccatgcaaaggcaacagtttctaagcagaaggggtgagatttcacat 20254156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 9 - 248
Target Start/End: Original strand, 43746847 - 43747087
Alignment:
Q  9 aatggcacaatggcctcaacatagacaacttattaaaat-ccaatctagatggttcatcaacataaaatcatatcaat-tacgtaacacatggaaaacaa 106  Q
    |||||||| | | |||||||||| ||||||||||||||| ||| | ||| ||||||||||||||||  |||||  ||| ||||||||| |||||| ||||    
T  43746847 aatggcactacgacctcaacataaacaacttattaaaattccattataggtggttcatcaacataat-tcata--aatatacgtaacaaatggaatacaa 43746943  T
Q  107 gt--aagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttac 204  Q
        ||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||||| |  |||||| |||| ||||||    
T  43746944 tgcaaagatctacatcccgttacgtaccagagcgaccctaagacgacgcgtgagagagtcaactcacatcaacagctagttctggttatctgcacgttac 43747043  T
Q  205 ccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||| ||||||||||| | ||||| |||||| |||||||||    
T  43747044 ccacgtaaaggcaacattcaaacagaatgggtgatatttcacat 43747087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 86 - 245
Target Start/End: Complemental strand, 4692325 - 4692164
Alignment:
Q  86 tacgtaacacatggaaaacaa-gtaa-gatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctat 183  Q
    ||||||||| ||||||||||| |||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||| |||||| |||     
T  4692325 tacgtaacaaatggaaaacaatgtattgatccccatcccgttacgtatcagagcgaccctaagacggcgcgtgagagagtcaacgcacatcaacaactaa 4692226  T
Q  184 tcttggttacctgcgcgttacccacgtagaggcaacattccaccagaaggggtgagatttca 245  Q
    || |||||| |||| |||||||||| ||||| |||||||| |  ||||||||||||||||||    
T  4692225 tcatggttatctgcacgttacccacttagagacaacattcaaatagaaggggtgagatttca 4692164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 248
Target Start/End: Complemental strand, 37786102 - 37785855
Alignment:
Q  4 atcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaa 103  Q
    ||||||||||||||| ||||||||| || | ||||||||||| ||||||||| |    || |||||||||| || ||  ||  |||||||||||||||||    
T  37786102 atcgtaatggcacaacggcctcaacttaaataacttattaaa-tccaatctaaacaaatcttcaacataaattcgtaataaaaacgtaacacatggaaaa 37786004  T
Q  104 caagtaagat-ccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgtt 202  Q
    |||| ||||| |||||||| ||||||||| ||||||||||||| ||||| |||||||||||| | |||||||||||||||  |||| ||||||||  |||    
T  37786003 caagcaagattccccatcctgttacgtataagagcgaccctaaaacgacacgtgagagagtc-actcacttcaacagctaaccttgattacctgcaagtt 37785905  T
Q  203 accca--cgtagaggcaacatt--ccaccagaaggggtgagatttcacat 248  Q
    |||||   ||| ||||||||||  | | ||||||||||||||||||||||    
T  37785904 acccaattgtaaaggcaacatttccaagcagaaggggtgagatttcacat 37785855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 57 - 220
Target Start/End: Complemental strand, 14154567 - 14154404
Alignment:
Q  57 atggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaagt--aagatccccatcccgttacgtatcagagcgaccctaagacgacgcg 154  Q
    |||||||||||||||||| |||||  ||| | |||||| |||||||||||    || |||||||||||||||| ||||||||| ||||||||||||||||    
T  14154567 atggttcatcaacataaa-tcataataat-atgtaacaaatggaaaacaatacaaatatccccatcccgttacatatcagagcaaccctaagacgacgcg 14154470  T
Q  155 tgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagaggcaaca 220  Q
    |||||||||||| |||| |||||| ||| || |||||| |||| ||||||||||||||||||||||    
T  14154469 tgagagagtcaactcacatcaacaactaatcctggttatctgcacgttacccacgtagaggcaaca 14154404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 207
Target Start/End: Complemental strand, 14220802 - 14220600
Alignment:
Q  4 atcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaa 103  Q
    |||||||||||||||  |||||||| || | ||||||||||| |||| |||| ||   || |||||||||| |||||  ||  |||||||||||||||||    
T  14220802 atcgtaatggcacaactgcctcaacttaaataacttattaaa-tccagtctaaataaatcttcaacataaattcataataaacacgtaacacatggaaaa 14220704  T
Q  104 caagtaagat-ccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgtt 202  Q
    |||| || || ||||||||| ||||||||||||| |||||||||||||| |||||||||||| | |||||||||||||||  |||| ||||||||  |||    
T  14220703 caagcaaaattccccatcccattacgtatcagagtgaccctaagacgacacgtgagagagtc-actcacttcaacagctaaccttgattacctgcaagtt 14220605  T
Q  203 accca 207  Q
    |||||    
T  14220604 accca 14220600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 213
Target Start/End: Original strand, 19194544 - 19194749
Alignment:
Q  9 aatggcacaatggcctcaacatagacaacttattaaaatc-caatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaag 107  Q
    |||||||| | ||| |||||||| |||||||||||||||  || ||||| | ||||||||||||||  |||||  ||| |||||||| ||| |||||||     
T  19194544 aatggcactacggcatcaacataaacaacttattaaaatttcattctaggtagttcatcaacataat-tcataataat-acgtaacaaatgaaaaacaac 19194641  T
Q  108 t--aagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacc 205  Q
       || ||| |||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||| || |||||| |||| |||||||    
T  19194642 acaaatatctccattccgttacgtatcagagagaccctaagacgacgcgtgagagagtcaactcacttcaacaactaatcctggttatctgcacgttacc 19194741  T
Q  206 cacgtaga 213  Q
    ||||||||    
T  19194742 cacgtaga 19194749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 65 - 207
Target Start/End: Complemental strand, 13151363 - 13151219
Alignment:
Q  65 tcaacataaaatcatatcaattacgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacg---cgtgagaga 161  Q
    |||||||||||||||   || |||||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||   |||||||||    
T  13151363 tcaacataaaatcatgataaatacgtaacacatggaaaacaagcaa-atccccatcccgttacgtattagagcgaccctaagacgacgacacgtgagaga 13151265  T
Q  162 gtcaattcacttcaacagctattcttggttacctgcgcgttaccca 207  Q
    ||||  |||||||||||| |||||||| || |||||  ||||||||    
T  13151264 gtcatctcacttcaacagttattcttgatttcctgcaagttaccca 13151219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 65 - 248
Target Start/End: Complemental strand, 15121043 - 15120854
Alignment:
Q  65 tcaacataaaatcatatcaattacgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacg---cgtgagaga 161  Q
    |||||||||||||||   || |||||||||||||||||||||| || ||||||||| | |||||||||||||| ||||||||||||||   |||||||||    
T  15121043 tcaacataaaatcatgataaatacgtaacacatggaaaacaagaaa-atccccatctcattacgtatcagagcaaccctaagacgacgacacgtgagaga 15120945  T
Q  162 gtcaattcacttcaacagctattcttggttacctgcgcgttaccca--cgtagaggcaacatt--ccaccagaaggggtgagatttcacat 248  Q
    ||||  ||||||||||||||||||||| || |||||  |||||| |   ||| ||||||||||  | | ||||||||||||||||||||||    
T  15120944 gtcatctcacttcaacagctattcttgatttcctgcaagttacctaattgtaaaggcaacatttccaagcagaaggggtgagatttcacat 15120854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 65 - 248
Target Start/End: Original strand, 12370583 - 12370772
Alignment:
Q  65 tcaacataaaatcatatcaattacgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacg---cgtgagaga 161  Q
    |||||||||||||||   || |||||||||||||||||||||| || |||||||||||| ||||||||||||||||| ||||||||||    ||||||||    
T  12370583 tcaacataaaatcatgataaatacgtaacacatggaaaacaagcaa-atccccatcccgatacgtatcagagcgaccataagacgacgacatgtgagaga 12370681  T
Q  162 gtcaattcacttcaacagctattcttggttacctgcgcgttaccca--cgtagaggcaaca-ttcca-ccagaaggggtgagatttcacat 248  Q
    ||||  ||||||||||||||||||||| || ||||   ||||||||   ||| |||||||| |||||  ||||||||||||||||||||||    
T  12370682 gtcatctcacttcaacagctattcttgatttcctgtaagttacccaattgtaaaggcaacatttccatgcagaaggggtgagatttcacat 12370772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 24271324 - 24271194
Alignment:
Q  112 atccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgta 211  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||||||| |||| ||  || ||| || || ||| |||| |||||||||||||    
T  24271324 atccccatcccgttacatatcagagcgaccctaagacgatgcgtgagagagtcaactcacatccgcaactaatcctgattatctgcacgttacccacgta 24271225  T
Q  212 gaggcaacattccaccagaaggggtgagatt 242  Q
    |||||| ||||  | ||||||||||||||||    
T  24271224 gaggcagcattaaaacagaaggggtgagatt 24271194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 65 - 248
Target Start/End: Original strand, 11065712 - 11065905
Alignment:
Q  65 tcaacataaaatcatatcaattacgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacg---cgtgagaga 161  Q
    |||||||||||||||   || |||||||||||||||||||||| || |||| |||||||||| |||||||||||||||||||||||||   |||||||||    
T  11065712 tcaacataaaatcatgataaatacgtaacacatggaaaacaagcaa-atcctcatcccgttatgtatcagagcgaccctaagacgacgacacgtgagaga 11065810  T
Q  162 gtcaattcacttcaacagc----tattcttggttacctgcgcgttaccca--cgtagaggcaacatt--ccaccagaaggggtgagatttcacat 248  Q
    ||||  |||||||||||||    |||||||| || |||||  ||||||||   ||| ||||||||||  | | ||||||||||||||||||||||    
T  11065811 gtcatctcacttcaacagctatatattcttgatttcctgcaagttacccaattgtaaaggcaacatttccaagcagaaggggtgagatttcacat 11065905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 65 - 248
Target Start/End: Complemental strand, 36686991 - 36686803
Alignment:
Q  65 tcaacataaaatcatatcaattacgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacg---cgtgagaga 161  Q
    |||||||||||||||   || ||||||||||||| |||||||| || |||||||||| ||| | ||||||||||||||||||||||||   |||||||||    
T  36686991 tcaacataaaatcatgataaatacgtaacacatgaaaaacaagcaa-atccccatcctgttgcatatcagagcgaccctaagacgacgacacgtgagaga 36686893  T
Q  162 gtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtaga-ggcaacatt--ccaccagaaggggtgagatttcacat 248  Q
    ||||  ||||||||||||||||||||| || |||||  ||||||||   | | |||||||||  | | ||||||||||||||||||||||    
T  36686892 gtcatctcacttcaacagctattcttgatttcctgcaagttacccatacaaagggcaacatttccaagcagaaggggtgagatttcacat 36686803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 65 - 248
Target Start/End: Original strand, 44373228 - 44373417
Alignment:
Q  65 tcaacataaaatcatatcaattacgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacg---acgcgtgagaga 161  Q
    |||||||||||||||   || |||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||   || |||||||||    
T  44373228 tcaacataaaatcatgataaatacgtaacacatggaaaacaagcaa-atctccatcccgttacgtatcagagcgaccctaagacgactacacgtgagaga 44373326  T
Q  162 gtcaattcacttcaacagctattcttggttacctgcgcgttaccca--cgtagaggcaacatt--ccaccagaaggggtgagatttcacat 248  Q
     |||  ||||||||||| ||||||||| || |||||  ||||| ||   |||  |||||||||  | | ||||||||||||||||||||||    
T  44373327 atcatctcacttcaacaactattcttgatttcctgcaagttactcaattgtaagggcaacatttccaagcagaaggggtgagatttcacat 44373417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 65 - 248
Target Start/End: Original strand, 44382084 - 44382273
Alignment:
Q  65 tcaacataaaatcatatcaattacgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacg---acgcgtgagaga 161  Q
    |||||||||||||||   || |||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||   || |||||||||    
T  44382084 tcaacataaaatcatgataaatacgtaacacatggaaaacaagcaa-atctccatcccgttacgtatcagagcgaccctaagacgactacacgtgagaga 44382182  T
Q  162 gtcaattcacttcaacagctattcttggttacctgcgcgttaccca--cgtagaggcaacatt--ccaccagaaggggtgagatttcacat 248  Q
     |||  ||||||||||| ||||||||| || |||||  ||||| ||   |||  |||||||||  | | ||||||||||||||||||||||    
T  44382183 atcatctcacttcaacaactattcttgatttcctgcaagttactcaattgtaagggcaacatttccaagcagaaggggtgagatttcacat 44382273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 86 - 248
Target Start/End: Complemental strand, 13700427 - 13700259
Alignment:
Q  86 tacgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagcgaccctaag---acgacgcgtgagagagtcaattcacttcaacagcta 182  Q
    |||||||||  ||||||||| | || |||||||||||||||||||||||||||||||||||   ||||| |||||||||| ||  ||||||||||| |||    
T  13700427 tacgtaacatgtggaaaaca-gcaaaatccccatcccgttacgtatcagagcgaccctaagacaacgacacgtgagagagacatctcacttcaacaacta 13700329  T
Q  183 ttcttggttacctgcgcgttaccca--cgtagaggcaacattcc--accagaaggggtgagatttcacat 248  Q
    |||||| ||||||||  ||||||||   ||| |||||||||| |  | ||||||||||||||||||||||    
T  13700328 ttcttgattacctgcaagttacccaattgtaaaggcaacatttcaaagcagaaggggtgagatttcacat 13700259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 112 - 248
Target Start/End: Complemental strand, 33557649 - 33557515
Alignment:
Q  112 atccccatcccgttacgtatcagagcgac-cctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgt 210  Q
    |||||||| |||||||||||||||||||| ||||||||||| || |   || |||| |||| | ||| | || || |||||| |||| ||||||||||||    
T  33557649 atccccatgccgttacgtatcagagcgactcctaagacgacacgag---gaatcaactcacattaacggttactcctggttatctgcacgttacccacgt 33557553  T
Q  211 agaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||| | ||||||||||||||||||||||    
T  33557552 agaggcaacattcaaacagaaggggtgagatttcacat 33557515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 115 - 248
Target Start/End: Original strand, 20618576 - 20618716
Alignment:
Q  115 cccatcccgttacgtatcagagcgaccctaagacgacg---cgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttaccca--cg 209  Q
    ||||||||||||||||||||||| ||||||||||||||   ||||||||||||   ||||||||||| ||||||||| || |||||  ||||||||   |    
T  20618576 cccatcccgttacgtatcagagcaaccctaagacgacgacacgtgagagagtcctctcacttcaacaactattcttgatttcctgcaagttacccaattg 20618675  T
Q  210 tagaggcaacatt--ccaccagaaggggtgagatttcacat 248  Q
    || ||||||||||  | | ||||||||||||||||||||||    
T  20618676 taaaggcaacatttccaagcagaaggggtgagatttcacat 20618716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 47093428 - 47093586
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatc-caatctagatggttcatcaacataaaatcatatcaattacgtaacacatgg 99  Q
    |||| |||||||||||||  ||||||||||| |||||||||||||||  || ||||| | |||| |||||||||  |||||  ||| |||||||| ||||    
T  47093428 aacaacgtaatggcacaactgcctcaacataaacaacttattaaaatttcattctaggtagttcctcaacataat-tcataataat-acgtaacaaatgg 47093525  T
Q  100 aaaacaagt--aagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgag 158  Q
    |||||||    || |||||||||  ||||||||||||||||||||||||||||| ||||||    
T  47093526 aaaacaacacaaatatccccatcatgttacgtatcagagcgaccctaagacgacacgtgag 47093586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 112 - 248
Target Start/End: Original strand, 9255521 - 9255655
Alignment:
Q  112 atccccatcccgttacgtatcagagcgac-cctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgt 210  Q
    ||||||||||| ||||||||||||||||| ||||||| ||| |   | ||| |||| |||| ||| | | || || |||||| |||| ||||||||||||    
T  9255521 atccccatcccattacgtatcagagcgactcctaagaagacac---aaagaatcaactcacatcagcggttactcatggttatctgcacgttacccacgt 9255617  T
Q  211 agaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||| | ||||||||||||||||| ||||    
T  9255618 agaggcaacattcaaacagaaggggtgagatttaacat 9255655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 112 - 248
Target Start/End: Complemental strand, 9314729 - 9314595
Alignment:
Q  112 atccccatcccgttacgtatcagagcgac-cctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgt 210  Q
    ||||||||||| ||||||||||||||||| ||||||| ||| |   | ||| |||| |||| ||| | | || || |||||| |||| ||||||||||||    
T  9314729 atccccatcccattacgtatcagagcgactcctaagaagacac---aaagaatcaactcacatcagcggttactcatggttatctgcacgttacccacgt 9314633  T
Q  211 agaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||| | ||||||||||||||||| ||||    
T  9314632 agaggcaacattcaaacagaaggggtgagatttaacat 9314595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 113 - 248
Target Start/End: Complemental strand, 13317396 - 13317263
Alignment:
Q  113 tccccatcccgttacgtatcagagcgac-cctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgta 211  Q
    ||||||||||||||| |||||||||||| ||||||| ||| ||    ||| |||| |||| ||| ||| || || || ||| |||| | |||||||||||    
T  13317396 tccccatcccgttacatatcagagcgactcctaagatgacacga---agaatcaactcacatcagcagttactcctgattatctgcacattacccacgta 13317300  T
Q  212 gaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||||||||| | ||||||||||||||||||||||    
T  13317299 gaggcaacattcaaacagaaggggtgagatttcacat 13317263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 116 - 248
Target Start/End: Original strand, 18569455 - 18569585
Alignment:
Q  116 ccatcccgttacgtatcagagcgac-cctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagag 214  Q
    |||||| |||||||||||||||||| ||||||||||| || |   || |||| |||| |||   | || ||||||||| ||||  |||||||||||||||    
T  18569455 ccatcctgttacgtatcagagcgactcctaagacgacacgag---gaatcaactcacatcagtggttactcttggttatctgcatgttacccacgtagag 18569551  T
Q  215 gcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||| | || |||||||||||||||||||    
T  18569552 gcaacattcaaacaaaaggggtgagatttcacat 18569585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 197
Target Start/End: Original strand, 3286398 - 3286479
Alignment:
Q  115 cccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgc 197  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||| |  |||||| ||| ||| ||||| ||||||||    
T  3286398 cccatcccgttacgtatcagagcgaccctaagacgacacatgagagagtcgacccacttc-acaactaatcttgattacctgc 3286479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 113 - 248
Target Start/End: Original strand, 37537855 - 37537988
Alignment:
Q  113 tccccatcccgttacgtatcagagcgacc-ctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgta 211  Q
    ||||||| ||||||||||||||||||||  |||||||||| || |   || |||| |||| |||   | || ||||||||| |||| |||||||||||||    
T  37537855 tccccattccgttacgtatcagagcgacttctaagacgacacgag---gaatcaactcacatcagaggttactcttggttatctgcacgttacccacgta 37537951  T
Q  212 gaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||||||||| | |||||||| | |||||||||||    
T  37537952 gaggcaacattcaaacagaagggatcagatttcacat 37537988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 115 - 207
Target Start/End: Original strand, 15719213 - 15719307
Alignment:
Q  115 cccatcccgttacgtatcagagcgaccctaa---gacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttaccca 207  Q
    |||||||||||||||||||||||||||||||   |||||| |||||||||||  | ||||||||| ||||| ||||| ||||||||  ||||||||    
T  15719213 cccatcccgttacgtatcagagcgaccctaagatgacgacacgtgagagagttgactcacttcaa-agctaatcttgattacctgcaagttaccca 15719307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 187 - 248
Target Start/End: Complemental strand, 18985807 - 18985746
Alignment:
Q  187 tggttacctgcgcgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||| |||| ||||||||||||||||||||||||| | |||||| |||||||||||||||    
T  18985807 tggttatctgcacgttacccacgtagaggcaacattcaaacagaagaggtgagatttcacat 18985746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 187 - 248
Target Start/End: Complemental strand, 19000435 - 19000374
Alignment:
Q  187 tggttacctgcgcgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||| |||| ||||||||||||||||||||||||| | |||||| |||||||||||||||    
T  19000435 tggttatctgcacgttacccacgtagaggcaacattcaaacagaagaggtgagatttcacat 19000374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 115 - 207
Target Start/End: Original strand, 20584579 - 20584673
Alignment:
Q  115 cccatcccgttacgtatcagagcgaccctaagacgacg---cgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttaccca 207  Q
    ||||||||||||||||||||||||||||||||||||||   |||||||||||  | ||||||| | ||||| ||||| ||||||||  ||||||||    
T  20584579 cccatcccgttacgtatcagagcgaccctaagacgacgacacgtgagagagttgactcacttc-atagctaatcttgattacctgcaagttaccca 20584673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 117 - 247
Target Start/End: Original strand, 15172187 - 15172316
Alignment:
Q  117 catcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagaggc 216  Q
    |||||||||||||||||||||   |||||||| || ||||||||| || | ||||  |  || ||||||||||||||||||  |||| ||||||||||||    
T  15172187 catcccgttacgtatcagagca--cctaagac-acacgtgagagaatccactcacgaccgcaactattcttggttacctgcaagttatccacgtagaggc 15172283  T
Q  217 aacatt--ccaccagaaggggtgagatttcaca 247  Q
    ||||||  | || ||||||||| ||||||||||    
T  15172284 aacatttccaacaagaaggggtaagatttcaca 15172316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 15212715 - 15212765
Alignment:
Q  87 acgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagc 137  Q
    |||||||| |||||||||||  |||||||||||||||||||||||||||||    
T  15212715 acgtaacatatggaaaacaataaagatccccatcccgttacgtatcagagc 15212765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 188
Target Start/End: Complemental strand, 32435250 - 32435128
Alignment:
Q  67 aacataaaatcatatcaattacgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacg---cgtgagagagt 163  Q
    |||||||||||||   || || ||||||||||||||||||| || |||||||||||    |||||||||||||||||||||| |||   |||||||||||    
T  32435250 aacataaaatcatgataaatatgtaacacatggaaaacaagcaa-atccccatcccacg-cgtatcagagcgaccctaagacaacgacacgtgagagagt 32435153  T
Q  164 caattcacttcaacagctattcttg 188  Q
    |   ||||||||||| |||||||||    
T  32435152 cgtctcacttcaacaactattcttg 32435128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 248
Target Start/End: Complemental strand, 42567081 - 42567020
Alignment:
Q  187 tggttacctgcgcgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||| |||| ||||||||||||||||||||||||| | || || ||||||||||||||||    
T  42567081 tggttatctgcacgttacccacgtagaggcaacattcaaacaaaatgggtgagatttcacat 42567020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 248
Target Start/End: Complemental strand, 15578323 - 15578275
Alignment:
Q  200 gttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||||||||||||| ||||||| | ||||||||||||||||||||||    
T  15578323 gttacccacgtagaggtaacattcaaacagaaggggtgagatttcacat 15578275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 117 - 164
Target Start/End: Original strand, 19281076 - 19281126
Alignment:
Q  117 catcccgttacgtatcagagcgaccctaagacgacg---cgtgagagagtc 164  Q
    ||||||||||||||||||||||||||||||||||||   ||||||||||||    
T  19281076 catcccgttacgtatcagagcgaccctaagacgacgacacgtgagagagtc 19281126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 25940879 - 25940974
Alignment:
Q  143 taagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagaggcaacattccaccagaaggggtga 238  Q
    |||||||| ||||||||||||||| |||| ||| |||||| || ||||||  | | |||||||||||||||  |||||||| | || |||||||||    
T  25940879 taagacgatgcgtgagagagtcaactcacatcagcagctaatcctggttatttccacgttacccacgtagatacaacattcaaacaaaaggggtga 25940974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 248
Target Start/End: Original strand, 38293933 - 38294067
Alignment:
Q  112 atccccatcccgttacgtatcagagcgac-cctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgt 210  Q
    |||| |||||||||||||||||||||||| ||||||||||| || |   || |||| |||| | | | | || |  || ||| |||| |||||||||| |    
T  38293933 atcctcatcccgttacgtatcagagcgactcctaagacgacacgag---gaatcaactcacattagcggttacttctgattatctgcacgttacccacat 38294029  T
Q  211 agaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||| | ||||| ||||||||||||||||    
T  38294030 agaggcaacattcaaacagaatgggtgagatttcacat 38294067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 248
Target Start/End: Complemental strand, 10663993 - 10663939
Alignment:
Q  194 ctgcgcgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||| ||||||||||||||||| ||||||| | |||||||||||| |||||||||    
T  10663993 ctgcacgttacccacgtagaggtaacattcaaacagaaggggtgatatttcacat 10663939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 241
Target Start/End: Complemental strand, 11314654 - 11314612
Alignment:
Q  199 cgttacccacgtagaggcaacattccaccagaaggggtgagat 241  Q
    ||||||||||||||||||||||||| | |||||||||||||||    
T  11314654 cgttacccacgtagaggcaacattcaaacagaaggggtgagat 11314612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 13254542 - 13254592
Alignment:
Q  87 acgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagc 137  Q
    |||||||| |||||||||||  |||||||||||||||||| ||||||||||    
T  13254542 acgtaacatatggaaaacaataaagatccccatcccgttatgtatcagagc 13254592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 14190003 - 14189953
Alignment:
Q  87 acgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagc 137  Q
    |||||||| |||||||||||  ||||| |||||||||||||||||||||||    
T  14190003 acgtaacatatggaaaacaataaagattcccatcccgttacgtatcagagc 14189953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 14192782 - 14192732
Alignment:
Q  87 acgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagc 137  Q
    |||||||| |||| ||||||  |||||||||||||||||||||||||||||    
T  14192782 acgtaacatatgggaaacaataaagatccccatcccgttacgtatcagagc 14192732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 248
Target Start/End: Original strand, 21659974 - 21660022
Alignment:
Q  200 gttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||||||  |||||| | ||||||||||||||||||||||    
T  21659974 gttacccacgtagaggtgacattcaaacagaaggggtgagatttcacat 21660022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 151
Target Start/End: Original strand, 30236574 - 30236614
Alignment:
Q  112 atccccatcccgttacgtatcagagcgac-cctaagacgac 151  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  30236574 atccccatcccgttacgtatcagagcgactcctaagacgac 30236614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 248
Target Start/End: Complemental strand, 36302194 - 36302141
Alignment:
Q  194 ctgcgcgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||| ||||||||||||||||||||||||| | ||||| |||| |||||||||||    
T  36302194 ctgcacgttacccacgtagaggcaacattcaaacagaa-gggttagatttcacat 36302141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 48742478 - 48742528
Alignment:
Q  87 acgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagc 137  Q
    |||||||| |||||||||||  |||||| ||||| ||||||||||||||||    
T  48742478 acgtaacatatggaaaacaataaagatctccatctcgttacgtatcagagc 48742528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 248
Target Start/End: Complemental strand, 8932087 - 8932038
Alignment:
Q  199 cgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||||||| |||||||||||||| | |||||||||||  |||||||||    
T  8932087 cgttacccacatagaggcaacattcaaacagaaggggtggaatttcacat 8932038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 33059262 - 33059299
Alignment:
Q  199 cgttacccacgtagaggcaacattccaccagaaggggt 236  Q
    ||||||||||||||||||||||||| | ||||||||||    
T  33059262 cgttacccacgtagaggcaacattcaaacagaaggggt 33059299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 172; Significance: 2e-92; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 21619626 - 21619379
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgga 100  Q
    |||| ||||||||||||| |||||||||||| ||||||||||| ||| |||||||  || |||||||||||||||||||| |||||||||||||||||||    
T  21619626 aacaacgtaatggcacaacggcctcaacataaacaacttattagaattcaatctaagtgattcatcaacataaaatcatagcaattacgtaacacatgga 21619527  T
Q  101 aaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || |||||||||||||||||| || ||| || | ||    
T  21619526 aaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcatgagagagttaactcacttcaacagctattcctgattatcttcacg 21619427  T
Q  201 ttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||    
T  21619426 ttacccacgtagaggcaacattcaaacagaaggggtgagatttcacat 21619379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 6 - 242
Target Start/End: Complemental strand, 20199279 - 20199043
Alignment:
Q  6 cgtaatggcacaatggcctcaacatagacaacttattaaaat-ccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaac 104  Q
    ||||||||||||| |||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||  ||| |||||||||||||||||     
T  20199279 cgtaatggcacaaaggcctcaacataaacaacttattaaaattccaatctaggtggttcatcaacataaaatcatagaaat-acgtaacacatggaaaag 20199181  T
Q  105 aagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttac 204  Q
    ||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||| ||||| |||||| |||| ||||||    
T  20199180 aagcaagatcctcatcccgttacgtatcagagtgaccctaagacgacgcgtgagagagtcagctcacttcaacagttattcatggttatctgcacgttac 20199081  T
Q  205 ccacgtagaggcaacattccaccagaaggggtgagatt 242  Q
    |||||||||| |||||||| | ||||||||||||||||    
T  20199080 ccacgtagagacaacattcaaacagaaggggtgagatt 20199043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 9 - 248
Target Start/End: Complemental strand, 20470684 - 20470445
Alignment:
Q  9 aatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaagt 108  Q
    ||||||||||  ||||||||||| | ||||||||||||||||||| || |   || |||||||||||||||  |||||| ||||||||||||||||||||    
T  20470684 aatggcacaactgcctcaacataaataacttattaaaatccaatccaggtaaatcttcaacataaaatcattgcaattatgtaacacatggaaaacaagt 20470585  T
Q  109 aagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccac 208  Q
    |||||||||||| ||||| |||||||||||||||||||||||||| ||||||| |||| |||||||||||||||| |||| ||| |||| | |||||||     
T  20470584 aagatccccatcacgttaagtatcagagcgaccctaagacgacgcatgagagaatcaactcacttcaacagctatccttgattatctgcacattacccaa 20470485  T
Q  209 gtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||||| | |||||||||||| |||||||||    
T  20470484 gtagaggcaacattcaaacagaaggggtgaaatttcacat 20470445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 25251460 - 25251215
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgga 100  Q
    ||||||||  |||||||||||||||||| || ||||| |||||||||||| | ||||    || ||||||||||||||||  || |||||||||||||||    
T  25251460 aacatcgtgttggcacaatggcctcaacttaaacaacatattaaaatccagtttagacaaatcttcaacataaaatcataataaatacgtaacacatgga 25251361  T
Q  101 aaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggtt-acctgcgc 199  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||| |||||||||| |||| || | |||| |    
T  25251360 aaacaagtaagatccccatcccgttacgtatcagagcaaccctaagacgacacgtgagagagtcaactcactgcaacagctatccttgattaatctgcac 25251261  T
Q  200 gttacccacgtagaggcaacattccaccagaaggggtgagatttca 245  Q
    ||||||||||||||| |||||||| | |||||||| ||||||||||    
T  25251260 gttacccacgtagagacaacattcaaacagaagggatgagatttca 25251215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 25315245 - 25315000
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgga 100  Q
    ||||||||  |||||||||||||||||| || ||||| |||||||||||| | ||||    || ||||||||||||||||  || |||||||||||||||    
T  25315245 aacatcgtgttggcacaatggcctcaacttaaacaacatattaaaatccagtttagacaaatcttcaacataaaatcataataaatacgtaacacatgga 25315146  T
Q  101 aaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggtt-acctgcgc 199  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||| |||||||||| |||| || | |||| |    
T  25315145 aaacaagtaagatccccatcccgttacgtatcagagcaaccctaagacgacacgtgagagagtcaactcactgcaacagctatccttgattaatctgcac 25315046  T
Q  200 gttacccacgtagaggcaacattccaccagaaggggtgagatttca 245  Q
    ||||||||||||||| |||||||| | |||||||| ||||||||||    
T  25315045 gttacccacgtagagacaacattcaaacagaagggatgagatttca 25315000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 9 - 222
Target Start/End: Original strand, 18743471 - 18743683
Alignment:
Q  9 aatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaagt 108  Q
    |||||||| | ||||| |||||| ||||||||||||| |||| | ||| |||||||||||||||||||||||  ||| |||||||||||||||||||||     
T  18743471 aatggcactacggccttaacataaacaacttattaaactccattttaggtggttcatcaacataaaatcatagaaat-acgtaacacatggaaaacaagc 18743569  T
Q  109 aagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccac 208  Q
    |||||| |||||||||||||||||| ||| |||||||||| ||| |||||||||||||||||||||||||||||||| |||||| |||| | ||||||||    
T  18743570 aagatctccatcccgttacgtatcaaagcaaccctaagacaacgtgtgagagagtcaattcacttcaacagctattcatggttatctgcacattacccac 18743669  T
Q  209 gtagaggcaacatt 222  Q
    ||||||||||||||    
T  18743670 gtagaggcaacatt 18743683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 29913783 - 29914022
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgga 100  Q
    |||| ||||||| ||||| | |||||||||| |||| |||||||| |||| ||||| |||||| ||||||||||||||||  ||| | |||||||| |||    
T  29913783 aacaacgtaatgacacaacgacctcaacataaacaagttattaaactccattctaggtggttcctcaacataaaatcatagaaat-atgtaacacaagga 29913881  T
Q  101 aaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcg 200  Q
    ||||||| ||||||   ||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||| || ||||    
T  29913882 aaacaagcaagatc---atctcgttacgtatcagagcgaccctaagacgacgcgtgagagagtcgactcacttcaacagctattcctggttatctacgcg 29913978  T
Q  201 ttacccacgtagaggcaacattccaccagaaggggtgagatttc 244  Q
    |||||| ||||||||||| |||| | ||||| ||||||||||||    
T  29913979 ttaccctcgtagaggcaatattcaaacagaatgggtgagatttc 29914022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 6 - 248
Target Start/End: Complemental strand, 8505459 - 8505217
Alignment:
Q  6 cgtaatggcacaatggcctcaacatagacaacttattaaaat-ccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaac 104  Q
    ||||||||||||| |||||||||||| ||||||||||||||| ||  | ||| ||||||||||||||||| |||||  ||| | ||||||||||||||||    
T  8505459 cgtaatggcacaacggcctcaacataaacaacttattaaaattccgttttaggtggttcatcaacataaa-tcataaaaat-atgtaacacatggaaaac 8505362  T
Q  105 aagt-aagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgtta 203  Q
    ||   |||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||| |||||| |||  | |||    
T  8505361 aaaacaagatccccatcgcgttaagtatcagagcgactctaagacgacgcgtgagagagtcaattcacttcaacaattattcctggttatctgtacatta 8505262  T
Q  204 cccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
     ||||||||||||||||||| | ||||||||||| ||||||||||    
T  8505261 tccacgtagaggcaacattcaaacagaaggggtgggatttcacat 8505217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 6 - 248
Target Start/End: Original strand, 12354470 - 12354710
Alignment:
Q  6 cgtaatggcacaatggcctcaacatagacaacttattaaaat-ccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaac 104  Q
    ||||||||||||| ||||||| |||| ||||||||||||||| ||| ||||| |||||||||||||||||||||||  ||| ||||||||||||||||||    
T  12354470 cgtaatggcacaacggcctcagcataaacaacttattaaaattccattctaggtggttcatcaacataaaatcatagaaat-acgtaacacatggaaaac 12354568  T
Q  105 aagtaagatccccatcccgttacgtatcagagcgac-cctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgtta 203  Q
    ||| |||||||||||||||||||||||||||||||| ||||||||||| |   |  || ||||  ||| ||| | | || || |||||| |||| |||||    
T  12354569 aagcaagatccccatcccgttacgtatcagagcgactcctaagacgacac---aaggaatcaacacacatcagcggttactcctggttatctgcacgtta 12354665  T
Q  204 cccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||||||||||||||||| | ||||||||||||||||||||||    
T  12354666 cccacgtagaggcaacattcaaacagaaggggtgagatttcacat 12354710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 112 - 248
Target Start/End: Complemental strand, 6552301 - 6552165
Alignment:
Q  112 atccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgta 211  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||| |||| |||||||||||||    
T  6552301 atcctcatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaactcacttcaacagctaatcctggttatctgcacgttacccacgta 6552202  T
Q  212 gaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||||||||| | ||||||||||||||||||||||    
T  6552201 gaggcaacattcaaacagaaggggtgagatttcacat 6552165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 9 - 248
Target Start/End: Original strand, 26748448 - 26748688
Alignment:
Q  9 aatggcacaatggcctcaacatagacaacttattaaaat-ccaatctagatggttcatcaacataaaatcatatcaat-tacgtaacacatggaaaacaa 106  Q
    |||||||| | ||||| |||||| |||| |||||||||| ||| ||||  ||||||||||||||||  |||||  ||| ||||||||| |||||||||||    
T  26748448 aatggcactacggcctgaacataaacaaattattaaaattccattctatgtggttcatcaacataat-tcata--aatatacgtaacaaatggaaaacaa 26748544  T
Q  107 gt--aagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttac 204  Q
        ||||| | |||||||||||||||| |||||||| |||||||||||||||||||||||| |||| |||||| ||| |  || ||| |||| ||||||    
T  26748545 tgcaaagattctcatcccgttacgtatcggagcgaccttaagacgacgcgtgagagagtcaactcacatcaacaactaattctgattatctgcacgttac 26748644  T
Q  205 ccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||||||||| | ||||||||||||||||||||||    
T  26748645 ccacgtagaggcaacattcaaacagaaggggtgagatttcacat 26748688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 26 - 248
Target Start/End: Complemental strand, 8834889 - 8834666
Alignment:
Q  26 aacatagacaacttattaaaat-ccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaagtaa--gatccccatccc 122  Q
    |||||| ||||||||||||||| ||| ||||  ||||||||||||||||  |||||  ||| |||||| ||| ||||||||| |||  ||||||||||||    
T  8834889 aacataaacaacttattaaaattccattctaagtggttcatcaacataat-tcataaaaat-acgtaatacaaggaaaacaattaaaagatccccatccc 8834792  T
Q  123 gttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagaggcaacatt 222  Q
    ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| || || |||  | |  |||||  |||||||||||| |||    
T  8834791 gttacgtatcagagcgaccctaagacgacacgtgagagagtcaactcacttcaacaactaatcctgattatttacatgttacttacgtagaggcaatatt 8834692  T
Q  223 ccaccagaaggggtgagatttcacat 248  Q
    | |  |||||||||||||||||||||    
T  8834691 caaatagaaggggtgagatttcacat 8834666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 86 - 248
Target Start/End: Original strand, 10952564 - 10952730
Alignment:
Q  86 tacgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacg---cgtgagagagtcaattcacttcaacagcta 182  Q
    |||||||||||||||||||| | || |||| |||||| |||||||||||||||||||||||||||||   |||||||||||||| ||||||| || ||||    
T  10952564 tacgtaacacatggaaaaca-gcaaaatcctcatcccattacgtatcagagcgaccctaagacgacgacacgtgagagagtcaactcacttcgacggcta 10952662  T
Q  183 ttcttggttacctgcgcgttacccacgtagaggcaacattcc--accagaaggggtgagatttcacat 248  Q
     ||||| ||||||||  ||||||||||||||||||||||| |  | ||||||||||||||||||||||    
T  10952663 atcttgattacctgcaagttacccacgtagaggcaacatttctaagcagaaggggtgagatttcacat 10952730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 22110349 - 22110479
Alignment:
Q  112 atccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgta 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||| |||||| || |||||| |||| |||||||||||||    
T  22110349 atccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagaggcaactcacatcagcagctaatcctggttatctgcacgttacccacgta 22110448  T
Q  212 gaggcaacattccaccagaaggggtgagatt 242  Q
    | |||||||||| | ||||||||| ||||||    
T  22110449 gtggcaacattcaaacagaaggggcgagatt 22110479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 20 - 242
Target Start/End: Complemental strand, 16605913 - 16605689
Alignment:
Q  20 ggcctcaacatagacaacttattaaaa--tccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaagt--aagatcc 115  Q
    |||||||||||| ||||||| ||||||  |||| |  | ||| |||||||||||||  |||||  ||| |||||||| |||||||||||    || ||||    
T  16605913 ggcctcaacataaacaacttcttaaaaattccatttcaaatgattcatcaacataat-tcataataat-acgtaacaaatggaaaacaatacaaatatcc 16605816  T
Q  116 ccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagagg 215  Q
     ||||||||||||||||||||||||||||||||||| |||||||||||||| |||| ||| |||||| || |||||| |||| |||||||||||||||||    
T  16605815 tcatcccgttacgtatcagagcgaccctaagacgacacgtgagagagtcaactcacatcagcagctaatcctggttatctgcacgttacccacgtagagg 16605716  T
Q  216 caacattccaccagaaggggtgagatt 242  Q
    |||||||| | || ||| |||||||||    
T  16605715 caacattcaaacaaaagaggtgagatt 16605689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 182
Target Start/End: Original strand, 16226302 - 16226473
Alignment:
Q  11 tggcacaatggcctcaacatagacaacttatt-aaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaagta 109  Q
    |||||||| ||||||||| || |||||||||| |||||||| ||||||    || |||||||||| |||||  || |||  ||||||||||||||||  |    
T  16226302 tggcacaacggcctcaacttaaacaacttatttaaaatccagtctagacaaatcttcaacataaattcataataaatacacaacacatggaaaacaatca 16226401  T
Q  110 agatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagcta 182  Q
    ||||| || ||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||    
T  16226402 agatctccttcccgttacgtatcagagcgaccctaagacgacacgtgagagagtc-actcacttcaacagcta 16226473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 6 - 248
Target Start/End: Original strand, 16062035 - 16062276
Alignment:
Q  6 cgtaatggcacaatggcctcaacatagacaacttattaaaat-ccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaac 104  Q
    ||||||||||| | |||||||||||| ||||||||||||||| ||| ||||  ||||||||||||||||  |||||  ||| |||||||||| |||||||    
T  16062035 cgtaatggcactacggcctcaacataaacaacttattaaaattccactctaagtggttcatcaacataat-tcataaaaat-acgtaacacaaggaaaac 16062132  T
Q  105 aagt--aagatccccatcccgttacgtatcagagcgac-cctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgt 201  Q
    ||    || |||| |||||||||||||||||||||||| ||||||||||| || |   || |||| |||| ||| | | || ||   |||| |||| |||    
T  16062133 aatacaaatatcctcatcccgttacgtatcagagcgactcctaagacgactcgag---gaatcaactcacatcagcggttactccaagttatctgcacgt 16062229  T
Q  202 tacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||||||||||||||||||| | ||||||||||| ||||||||||    
T  16062230 tacccacgtagaggcaacattcaaacagaaggggtgggatttcacat 16062276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 26645934 - 26646181
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatc-caatctagatggttcatcaacataaaatcatatcaattacgtaacacatgg 99  Q
    |||| |||||||||||||  || |||||||| |||||||||||||||  || ||||| ||||| ||||||||||  |||||  ||| |||||||| ||||    
T  26645934 aacaacgtaatggcacaacagcatcaacataaacaacttattaaaatttcattctaggtggtttatcaacataat-tcataataat-acgtaacaaatgg 26646031  T
Q  100 aaaacaagt--aagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgc 197  Q
    |||||||    || |||||||||||||||||||||||||||| |||||||||||||||  ||||||||| |||| |||||| |   || ||| |||||||    
T  26646032 aaaacaacacaaatatccccatcccgttacgtatcagagcgatcctaagacgacgcgt--gagagtcaactcacatcaacaac--atcctggctacctgc 26646127  T
Q  198 gcgttacccacgtagaggcaaca--ttcc-accagaaggggtgagatttcacat 248  Q
      |||||||| | | ||||||||  |||| | ||||||||||||||||||||||    
T  26646128 aagttacccatgcaaaggcaacagtttccaagcagaaggggtgagatttcacat 26646181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 89 - 207
Target Start/End: Original strand, 20564803 - 20564921
Alignment:
Q  89 gtaacacatggaaaacaagtaagatcccca-tcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattctt 187  Q
    ||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||| || ||  |||    
T  20564803 gtaacacatggaaaacaagcaagattcccaatcccgttacgtatcagagcgaccctaagacgacacgtgagagagtc-actcacttcaagagttaacctt 20564901  T
Q  188 ggttacctgcgcgttaccca 207  Q
    | ||||||||  ||||||||    
T  20564902 gattacctgcaagttaccca 20564921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 112 - 207
Target Start/End: Complemental strand, 23203527 - 23203429
Alignment:
Q  112 atccccatcccgttacgtatcagagcgaccctaagacgacg---cgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttaccca 207  Q
    |||||||||| ||||||||||||||||||||||||||||||   |||||||||||||| ||||||||||| ||||||||  ||||||||  ||||||||    
T  23203527 atccccatcctgttacgtatcagagcgaccctaagacgacgacacgtgagagagtcaactcacttcaacaactattcttaattacctgcaagttaccca 23203429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 65 - 207
Target Start/End: Original strand, 26760707 - 26760851
Alignment:
Q  65 tcaacataaaatcatatcaattacgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacg---cgtgagaga 161  Q
    |||||||||||||||   || |||||||||||||||||||||| || ||  |||||||||||||||||||||||||||||||||||||     |||||||    
T  26760707 tcaacataaaatcatgataaatacgtaacacatggaaaacaagcaa-atgtccatcccgttacgtatcagagcgaccctaagacgacgaatattgagaga 26760805  T
Q  162 gtcaattcacttcaacagctattcttggttacctgcgcgttaccca 207  Q
    ||||  |||||| ||||| |||||||| || |||||  ||||||||    
T  26760806 gtcatctcactttaacagatattcttgatttcctgcaagttaccca 26760851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 117 - 206
Target Start/End: Original strand, 31621652 - 31621741
Alignment:
Q  117 catcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttaccc 206  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||| || | |||| |||| ||||||||    
T  31621652 catctcgttacgtatcagagcgaccctaagacgacgcgtaagagagtcaactcacatcaacagctaatcatagttatctgcacgttaccc 31621741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 116 - 248
Target Start/End: Complemental strand, 26766284 - 26766154
Alignment:
Q  116 ccatcccgttacgtatcagagcgac-cctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagag 214  Q
    ||||||||||||||||||||||||| ||||||||||| || || |   |||| |||| ||||| | || || || ||| |||| ||||||||| ||||||    
T  26766284 ccatcccgttacgtatcagagcgactcctaagacgacacgagaaa---tcaactcacatcaacggttactcctgcttatctgcacgttacccaagtagag 26766188  T
Q  215 gcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||| | ||||||||||||||||||||||    
T  26766187 gcaacattcaaacagaaggggtgagatttcacat 26766154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 113 - 248
Target Start/End: Complemental strand, 14027490 - 14027357
Alignment:
Q  113 tccccatcccgttacgtatcagagcgac-cctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgta 211  Q
    |||||||||||||||||||||||||||| ||||||||||| |  |   || |||| |||| ||| |   || | ||||||| ||||  ||||||||||||    
T  14027490 tccccatcccgttacgtatcagagcgactcctaagacgacacaag---gaatcaactcacatcagcgattacttttggttatctgcatgttacccacgta 14027394  T
Q  212 gaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||||||||| | ||||||||||||||||||||||    
T  14027393 gaggcaacattcaaacagaaggggtgagatttcacat 14027357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 21419511 - 21419575
Alignment:
Q  184 tcttggttacctgcgcgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||| || |||| |||||| |||||||||||||||||| | ||||||||||||||||||||||    
T  21419511 tcttggatatctgcacgttacgcacgtagaggcaacattcaaacagaaggggtgagatttcacat 21419575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 207
Target Start/End: Complemental strand, 21407310 - 21407218
Alignment:
Q  117 catcccgttacgtatcagagcgaccctaagacgacg---cgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttaccca 207  Q
    ||||||||||||||||||||||||| ||||||||||   |||||||||||| | ||||||| ||| ||| ||||| ||||||||  ||||||||    
T  21407310 catcccgttacgtatcagagcgaccgtaagacgacgacacgtgagagagtcgactcacttc-acaactaatcttgattacctgcaagttaccca 21407218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 22359006 - 22358956
Alignment:
Q  87 acgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagc 137  Q
    |||||||| |||||||||||  |||||||||||||||||||||||||||||    
T  22359006 acgtaacatatggaaaacaataaagatccccatcccgttacgtatcagagc 22358956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 23537573 - 23537623
Alignment:
Q  87 acgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagc 137  Q
    |||||||| |||||||||||  |||||||||||||||||||||||||||||    
T  23537573 acgtaacatatggaaaacaataaagatccccatcccgttacgtatcagagc 23537623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 248
Target Start/End: Original strand, 12354052 - 12354101
Alignment:
Q  199 cgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||||||||||||||||| |||| | ||||||||||||||||||||||    
T  12354052 cgttacccacgtagaggcaatattcaaacagaaggggtgagatttcacat 12354101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 248
Target Start/End: Original strand, 30609770 - 30609830
Alignment:
Q  187 tggttacctgcgcgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||| |||| ||||||||||||||||||||||||| | ||| ||||||||||||||||||    
T  30609770 tggttatctgcacgttacccacgtagaggcaacattcaaacag-aggggtgagatttcacat 30609830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 21402391 - 21402333
Alignment:
Q  189 gttacctgcgcgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||| |||| ||||||||||||||||||||||||| | ||||| ||||||||||||||||    
T  21402391 gttatctgcacgttacccacgtagaggcaacattcaaacagaa-gggtgagatttcacat 21402333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 246
Target Start/End: Original strand, 21403302 - 21403349
Alignment:
Q  199 cgttacccacgtagaggcaacattccaccagaaggggtgagatttcac 246  Q
    |||||||||||||||| |||||||| | ||||||||||||||||||||    
T  21403302 cgttacccacgtagagacaacattcaaacagaaggggtgagatttcac 21403349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 137
Target Start/End: Original strand, 22468981 - 22469109
Alignment:
Q  11 tggcacaatggcctcaacatagacaacttattaaa-atccaatctagatggttcatcaacataaaa-tcata-tcaattacgtaacacatggaaaacaag 107  Q
    |||||||| ||||||||| || |||||||| |||| ||||| |||| |  || | ||||||||||| ||||| | ||| || ||||| |||||||||||     
T  22468981 tggcacaacggcctcaacttaaacaacttaataaagatccagtctaaacagt-cttcaacataaaagtcataatgaatcacataacatatggaaaacaat 22469079  T
Q  108 taagatccccatcccgttacgtatcagagc 137  Q
     |||||||| ||||||||||||||||||||    
T  22469080 aaagatcccaatcccgttacgtatcagagc 22469109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 242
Target Start/End: Complemental strand, 16256903 - 16256851
Alignment:
Q  191 tacctgcgcgttacccacg-tagaggcaacattccaccagaaggggtgagatt 242  Q
    ||||||| ||||||||||| | |||||||||||| | ||||||||||||||||    
T  16256903 tacctgcacgttacccacggtcgaggcaacattcaaacagaaggggtgagatt 16256851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 242
Target Start/End: Complemental strand, 16260497 - 16260445
Alignment:
Q  191 tacctgcgcgttacccacg-tagaggcaacattccaccagaaggggtgagatt 242  Q
    ||||||| ||||||||||| | |||||||||||| | ||||||||||||||||    
T  16260497 tacctgcacgttacccacggtcgaggcaacattcaaacagaaggggtgagatt 16260445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 242
Target Start/End: Complemental strand, 22590622 - 22590570
Alignment:
Q  191 tacctgcgcgttacccacg-tagaggcaacattccaccagaaggggtgagatt 242  Q
    ||||||| ||||||||||| | |||||||||||| | ||||||||||||||||    
T  22590622 tacctgcacgttacccacggtcgaggcaacattcaaacagaaggggtgagatt 22590570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 242
Target Start/End: Complemental strand, 22594177 - 22594125
Alignment:
Q  191 tacctgcgcgttacccacg-tagaggcaacattccaccagaaggggtgagatt 242  Q
    ||||||| ||||||||||| | |||||||||||| | ||||||||||||||||    
T  22594177 tacctgcacgttacccacggtcgaggcaacattcaaacagaaggggtgagatt 22594125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 242
Target Start/End: Complemental strand, 22597732 - 22597680
Alignment:
Q  191 tacctgcgcgttacccacg-tagaggcaacattccaccagaaggggtgagatt 242  Q
    ||||||| ||||||||||| | |||||||||||| | ||||||||||||||||    
T  22597732 tacctgcacgttacccacggtcgaggcaacattcaaacagaaggggtgagatt 22597680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 248
Target Start/End: Complemental strand, 33896781 - 33896714
Alignment:
Q  180 ctattcttggttacctgcgcgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||||||||  |||||||| |  | |||||||||  | ||||||||||||||||||||||    
T  33896781 ctattcttggttacctgcaagttacccatggtg-ggcaacatttaaacagaaggggtgagatttcacat 33896714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 172; Significance: 2e-92; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 18391869 - 18391622
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgga 100  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||||||| ||  || |||||||||||||||| || ||||||||||||||||    
T  18391869 aacatcgtaatggcacaacggcctcaacataaacaacttattaaaatccaatctaggtgaatcttcaacataaaatcatagcatttacgtaacacatgga 18391770  T
Q  101 aaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcg 200  Q
    |||||  ||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||| |||| ||    
T  18391769 aaacagataagatccccatctcgttacatatcagagcgaccctaagacgacgcatgagagagtcaactcacttcaacagctattcctggttatctgcacg 18391670  T
Q  201 ttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||    
T  18391669 ttacccacgtagaggcaacattcaaacagaaggggtgagatttcacat 18391622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 6 - 242
Target Start/End: Original strand, 44070994 - 44071230
Alignment:
Q  6 cgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaaca 105  Q
    ||||||||||||| |||||||||||| ||||||||||||||| |||||||| || |||||||||||||||||||| ||| ||||||||||||||||||||    
T  44070994 cgtaatggcacaacggcctcaacataaacaacttattaaaattcaatctaggtgattcatcaacataaaatcatagcaaatacgtaacacatggaaaaca 44071093  T
Q  106 agtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacc 205  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||| |||| |||||||    
T  44071094 agtaagatctccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaactcacttcaacagctattcctgattatctgcacgttacc 44071193  T
Q  206 cacgtagaggcaacattccaccagaaggggtgagatt 242  Q
    ||||||||| ||||||||   ||||||||||||||||    
T  44071194 cacgtagagacaacattcacgcagaaggggtgagatt 44071230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 27851067 - 27851314
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgga 100  Q
    |||| ||||||||||||| | |||||||||| ||||||| ||||| |||| | ||||||||||||||||||||||||||| |||||||||||||||||||    
T  27851067 aacaacgtaatggcacaacgacctcaacataaacaacttcttaaactccattatagatggttcatcaacataaaatcatagcaattacgtaacacatgga 27851166  T
Q  101 aaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcg 200  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||| |||||| |||||| |||| ||    
T  27851167 aaacaactaagatccccatcccgttacgtatcagagcgaccctaaggcgacgcgtgagagagttaactcacttcaacaactattcctggttatctgcacg 27851266  T
Q  201 ttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||||||||||||| | |||||| | |||||||||||||    
T  27851267 ttacccacgtagaggcaacattcaaacagaagagatgagatttcacat 27851314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 7 - 248
Target Start/End: Original strand, 25138283 - 25138525
Alignment:
Q  7 gtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaa 106  Q
    |||||||||||| |||||||||||| |||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  25138283 gtaatggcacaacggcctcaacataaacaacttatttaaatccaatctagatgattcatcaacataaaatcatagcaattacgtaacacatggaaaacaa 25138382  T
Q  107 gtaaga-tccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacc 205  Q
    |||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |  |||||| |||| | |||||    
T  25138383 gtaaaaatctccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaactcacttcaacagctaatactggttatctgcacattacc 25138482  T
Q  206 cacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||||| ||||||||| | |||||||| |||||||||||||    
T  25138483 cacgtagatgcaacattcaaacagaagggatgagatttcacat 25138525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 6 - 245
Target Start/End: Original strand, 22258403 - 22258642
Alignment:
Q  6 cgtaatggcacaatggcctcaacatagacaacttattaaaatccaat-ctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaac 104  Q
    ||||||||||||| |||||||||||| ||||||||||||||||| || |||| |||||||||||||||||||||||  ||| |||||||| |||||||||    
T  22258403 cgtaatggcacaacggcctcaacataaacaacttattaaaatcccattctaggtggttcatcaacataaaatcatagaaat-acgtaacaaatggaaaac 22258501  T
Q  105 aagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttac 204  Q
    ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||||| |||| ||||||    
T  22258502 aagcaagatccccatcccgttacgtatcagagtgaccctaagacgacgcgtgagagagtcaactcacttcaacagctattcctggttatctgcacgttac 22258601  T
Q  205 ccacgtagaggcaacattccaccagaaggggtgagatttca 245  Q
    ||||||||||||| ||||| | |||||||||||||||||||    
T  22258602 ccacgtagaggcagcattcaaacagaaggggtgagatttca 22258642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 22671026 - 22671276
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgga 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  22671026 aacatcgtaatggcacaacggcctcaacatagacaacttattaaaatccaatctagatggttcttcaacataaaatcatatcaatcacgtaacacatgga 22671125  T
Q  101 aaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcg 200  Q
    ||||||||||||||| ||||||||||||||||||||| | ||||||||||| |||||||||||| | ||||||||||||||| ||||| |||||||   |    
T  22671126 aaacaagtaagatcctcatcccgttacgtatcagagctatcctaagacgacacgtgagagagtc-actcacttcaacagctaatcttgattacctggaag 22671224  T
Q  201 ttaccca--cgtagaggcaacatt--ccaccagaaggggtgagatttcacat 248  Q
    |||||||   |||  |||||||||  | | ||||||||||||||||||||||    
T  22671225 ttacccaattgtaagggcaacatttccaagcagaaggggtgagatttcacat 22671276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 3538239 - 3538486
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaat-ctagatggttcatcaacataaaatcatatcaattacgtaacacatgg 99  Q
    |||| ||||||  ||||| | |||||||||| |||||| |||||||||| || |||| |||||||||||||||||||||||  ||| |||||||||||||    
T  3538239 aacaacgtaataacacaacgacctcaacataaacaactcattaaaatcccattctaggtggttcatcaacataaaatcataggaat-acgtaacacatgg 3538337  T
Q  100 aaaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgc 199  Q
    |||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| |||||| |||| |    
T  3538338 aaaacaagcaagatccacatcccgttacgtatcagagcaaccctaagacgacgcgtgagagagtcaactcacttcaacagctattcctggttatctgcac 3538437  T
Q  200 gttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||||||||||||||||||||| | ||||| ||||||||||||||||    
T  3538438 gttacccacgtagaggcaacattcaaacagaatgggtgagatttcacat 3538486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 22 - 248
Target Start/End: Original strand, 27859803 - 27860029
Alignment:
Q  22 cctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaagtaagatccccatcc 121  Q
    |||||||||| ||||||||||||| || | | | ||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  27859803 cctcaacataaacaacttattaaactctattttggatggtttatcaacataaaatcatagcaattacgtgacacatggaaaacaagtaagatccccatcc 27859902  T
Q  122 cgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagaggcaacat 221  Q
    |||||||||||||||||||||||||||||| | |||||||||||| ||||||||||| |||||| |||||| |||| |||||||||||||||||||||||    
T  27859903 cgttacgtatcagagcgaccctaagacgacacatgagagagtcaactcacttcaacaactattcctggttatctgcacgttacccacgtagaggcaacat 27860002  T
Q  222 tccaccagaaggggtgagatttcacat 248  Q
    || | |||||| | |||||||||||||    
T  27860003 tcaaacagaagagatgagatttcacat 27860029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 10 - 248
Target Start/End: Complemental strand, 1385614 - 1385375
Alignment:
Q  10 atggcacaatggcctcaacatagacaacttattaaaatc-caatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaagt 108  Q
    ||||||||| |||||||||||| |||||||||||||||  || ||||| | ||||||||||||||  |||||  ||| |||||||| |||||||||||      
T  1385614 atggcacaacggcctcaacataaacaacttattaaaatttcattctaggtagttcatcaacataat-tcataataat-acgtaacaaatggaaaacaaca 1385517  T
Q  109 --aagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttaccc 206  Q
      || ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||| || | |||||||     
T  1385516 caaatatctccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaactcacttcaacagctaatcctggttatctacacgttacct 1385417  T
Q  207 acgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||||||  | ||||||||||||||||||||||    
T  1385416 acgtagaggcaacatttaaacagaaggggtgagatttcacat 1385375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 10745022 - 10744774
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaa--tccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatg 98  Q
    |||| ||||||||||||| |||||||||||| |||||||||||| |  | || |  | |||||||| ||||||||| | |||  ||| |||||||| |||    
T  10745022 aacaacgtaatggcacaacggcctcaacataaacaacttattaagaattacatttcaaatggttcaccaacataaatt-ataataat-acgtaacatatg 10744925  T
Q  99 gaaaacaagt-aagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgc 197  Q
    ||||||||   || ||||||||||||||||||||||||| |||||||||||| |||||||||||||||| |||||||||||||||||  || ||| ||||    
T  10744924 gaaaacaacacaatatccccatcccgttacgtatcagagagaccctaagacggcgcgtgagagagtcaactcacttcaacagctatttctgattatctgc 10744825  T
Q  198 gcgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
     ||||||||||||||||||||||||| | ||||| ||||||||||||||||    
T  10744824 acgttacccacgtagaggcaacattcaaacagaaagggtgagatttcacat 10744774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 5984615 - 5984836
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgga 100  Q
    ||||||||  |||||||| ||||||||| |  ||||||| |||||||||| | || |    || |||||| |||||||||  || ||||||| |||||||    
T  5984615 aacatcgtgttggcacaacggcctcaactttaacaacttgttaaaatccagtttaaacaaatcttcaacacaaaatcataataaatacgtaatacatgga 5984714  T
Q  101 aaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcg 200  Q
    ||||||| || ||| ||||||||||||||||||||| |||||||||||||| ||||||| |||||| ||||||||||||||||||||| ||||||||  |    
T  5984715 aaacaagcaaaatctccatcccgttacgtatcagagtgaccctaagacgacacgtgagaaagtcaactcacttcaacagctattcttgattacctgcaag 5984814  T
Q  201 ttacccacgtagaggcaacatt 222  Q
    ||||||||||||||||||||||    
T  5984815 ttacccacgtagaggcaacatt 5984836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 27039801 - 27039549
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaa-tccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgg 99  Q
    ||||||||  |||||||||||||||||| || | |||||||||||| |||| | || |     | ||||||||||||||||  || ||||||||||||||    
T  27039801 aacatcgtgttggcacaatggcctcaacttaaataacttattaaaaatccagtttaaacaaaacttcaacataaaatcataataaatacgtaacacatgg 27039702  T
Q  100 aaaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacg---cgtgagagagtcaattcacttcaacagctattcttggttacctg 196  Q
    |||||| | || ||| |||||||||||||||||||||||||||||||||||||   |||||||||||||| |||||||||| |||||||||| |||||||    
T  27039701 aaaaca-gcaaaatctccatcccgttacgtatcagagcgaccctaagacgacgacacgtgagagagtcaactcacttcaacggctattcttgattacctg 27039603  T
Q  197 cgcgttacccacgtagaggcaacatt--ccaccagaaggggtgagatttcacat 248  Q
    |   ||||||||||||| ||||||||  | | ||||||||||||||||||||||    
T  27039602 cagcttacccacgtagaagcaacatttccaagcagaaggggtgagatttcacat 27039549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 65 - 248
Target Start/End: Original strand, 25044553 - 25044740
Alignment:
Q  65 tcaacataaaatcatatcaattacgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacg---cgtgagaga 161  Q
    ||||||||||| ||||  || ||||||||||||||||||||  ||| |||| |||||||||||||||||||||||||||||||| |||   |||||||||    
T  25044553 tcaacataaaaccataataaatacgtaacacatggaaaacat-taaaatcctcatcccgttacgtatcagagcgaccctaagactacgacacgtgagaga 25044651  T
Q  162 gtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagaggcaacatt--ccaccagaaggggtgagatttcacat 248  Q
    ||||| ||||||||||| ||||||||| ||||||||  |||||||| ||||||||||||||  | | ||||||||||||||||||||||    
T  25044652 gtcaactcacttcaacaactattcttgattacctgcaagttacccatgtagaggcaacatttccaagcagaaggggtgagatttcacat 25044740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 4 - 248
Target Start/End: Original strand, 19357279 - 19357527
Alignment:
Q  4 atcgtaatggcacaatggcctcaacatagacaacttatt-aaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaa 102  Q
    ||||||||||||||| ||||||||| || |||||||||| |||||||||||||||    || |||||||||| |||||  || |||| ||||||||||||    
T  19357279 atcgtaatggcacaacggcctcaacttaaacaacttatttaaaatccaatctagacaaatcttcaacataaattcataataaatacgcaacacatggaaa 19357378  T
Q  103 acaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgtt 202  Q
    ||||  ||||||||| |||||||||||||||||| |||||||||||||| |||||||||||| | ||||||||| |||||  |||| ||||||||  |||    
T  19357379 acaatcaagatccccttcccgttacgtatcagagtgaccctaagacgacacgtgagagagtc-actcacttcaaaagctaaccttgattacctgcaagtt 19357477  T
Q  203 accca--cgtagaggcaacatt--ccaccagaaggggtgagatttcacat 248  Q
    ||| |   ||| ||||||||||  | | ||||| ||||||||||||||||    
T  19357478 acctaattgtaaaggcaacatttccaagcagaatgggtgagatttcacat 19357527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 9 - 248
Target Start/End: Complemental strand, 21337503 - 21337260
Alignment:
Q  9 aatggcacaatggcctcaacatagacaacttattaaaat-ccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaag 107  Q
    |||||||| | |||||||||||| ||||||||||||||| ||| | ||| ||||||||||||||||  |||||  ||| |||||||| |||||| ||||     
T  21337503 aatggcactacggcctcaacataaacaacttattaaaattccattttaggtggttcatcaacataat-tcataataat-acgtaacaaatggaagacaac 21337406  T
Q  108 t--aagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacc 205  Q
       || |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||| || ||||||||| |  ||||||    
T  21337405 ataaatatccccatcccgttacgtatcatagcgaccctaagacgacgcgtgagagagtcaactcacatcaacagctaatcctggttacctacaagttacc 21337306  T
Q  206 cacgtagaggcaaca--ttcc-accagaaggggtgagatttcacat 248  Q
    || | | ||||||||  |||| | ||||||||||||||||||||||    
T  21337305 catgcaaaggcaacagtttccaagcagaaggggtgagatttcacat 21337260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 117 - 248
Target Start/End: Original strand, 44761633 - 44761764
Alignment:
Q  117 catcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagaggc 216  Q
    ||||||||||| |||||||||||||||||||||||| |||||||| |||| |||| |||||||||| |  |||||| |||| ||||||||||||||||||    
T  44761633 catcccgttacatatcagagcgaccctaagacgacgtgtgagagaatcaactcacatcaacagctaattctggttatctgcacgttacccacgtagaggc 44761732  T
Q  217 aacattccaccagaaggggtgagatttcacat 248  Q
    ||||||| | |||||| |||||||||||||||    
T  44761733 aacattcaaacagaagaggtgagatttcacat 44761764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 65 - 248
Target Start/End: Complemental strand, 24782695 - 24782506
Alignment:
Q  65 tcaacataaaatcatatcaattacgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacg---cgtgagaga 161  Q
    |||||||||||||||   || |||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||   | |||||||    
T  24782695 tcaacataaaatcatgataaatacgtaacacatggaaaacaagcaa-atctccatcccgttacgtatcagagcgaccctaagacgacgacacttgagaga 24782597  T
Q  162 gtcaattcacttcaacagctattcttggttacctgcgcgttaccca--cgtagaggcaacatt--ccaccagaaggggtgagatttcacat 248  Q
    ||||  ||||||||||||||||||||| || |||||  ||||||||   ||| ||||||||||  | | ||||||||||||||||||||||    
T  24782596 gtcatctcacttcaacagctattcttgatttcctgcaagttacccaattgtaaaggcaacatttccaagcagaaggggtgagatttcacat 24782506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 88 - 248
Target Start/End: Complemental strand, 18389976 - 18389812
Alignment:
Q  88 cgtaacacatggaaaacaagtaagatcc-ccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattct 186  Q
    |||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||  ||    
T  18389976 cgtaacacatggaaaacaagtaagattctccatcctgttacgtatcagagcgaccctaagacgacacgtgagagagtc-actcacttcaacagctaacct 18389878  T
Q  187 tggttacctgcgcgttaccca--cgtagaggcaaca--ttccaccagaaggggtgagatttcacat 248  Q
    || ||||||||   |||||||   ||| ||||||||  ||| | ||||||||||||||||||||||    
T  18389877 tgattacctgcaacttacccaattgtaaaggcaacattttcaagcagaaggggtgagatttcacat 18389812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 36 - 248
Target Start/End: Complemental strand, 10898582 - 10898365
Alignment:
Q  36 acttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaagtaagatccccatcccgttacgtatcaga 135  Q
    ||||||||||||||| |||||| |  || | |||||||| |||||  ||  || |||||||||||||||||  |||||||||||||||||||||||||||    
T  10898582 acttattaaaatccagtctagacgaatctttaacataaattcataataaacacataacacatggaaaacaaacaagatccccatcccgttacgtatcaga 10898483  T
Q  136 gcgaccctaagacgacgcgtgagag--agtcaattcacttcaacagctattcttggttacctgcgcgttaccca--cgtagaggcaacatt--ccaccag 229  Q
    ||||| |||||||||| ||||||||  |||| | |||||||| ||||||  |||| ||||||||  ||||||||   ||| ||||||||||  | | |||    
T  10898482 gcgactctaagacgacacgtgagagacagtc-actcacttcatcagctaaccttgattacctgcaagttacccaattgtaaaggcaacatttccaagcag 10898384  T
Q  230 aaggggtgagatttcacat 248  Q
    |||||||||||||||||||    
T  10898383 aaggggtgagatttcacat 10898365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 89 - 246
Target Start/End: Original strand, 14692810 - 14692970
Alignment:
Q  89 gtaacacatggaaa-acaagtaagat-ccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattct 186  Q
    |||||||||||||| ||||  ||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||| | ||||||||||| |||  ||    
T  14692810 gtaacacatggaaagacaatcaagattccccatcccgttacgtatcagagcgaacctaagacgacacgtgagagagtc-actcacttcaacaactaacct 14692908  T
Q  187 tggttacctgcgcgttacccacgtagaggcaacatt--ccaccagaaggggtgagatttcac 246  Q
    || ||| ||||  |||||||||||||||||||||||  | | |||||||||||| |||||||    
T  14692909 tgattatctgcaagttacccacgtagaggcaacatttccaagcagaaggggtgaaatttcac 14692970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 112 - 248
Target Start/End: Complemental strand, 21317409 - 21317270
Alignment:
Q  112 atccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgta 211  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||| |||||||||| || ||||||||| |  ||||| || | |    
T  21317409 atccccatcccgttacgtatcatagcaaccctaagacgacgcgtgagagagtcaactcacatcaacagctaatcctggttacctacaagttactcatgca 21317310  T
Q  212 gaggcaaca--ttcc-accagaaggggtgagatttcacat 248  Q
     ||||||||  |||| | ||||| ||||||||||||||||    
T  21317309 aaggcaacaatttccaagcagaatgggtgagatttcacat 21317270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 65 - 197
Target Start/End: Original strand, 25084695 - 25084829
Alignment:
Q  65 tcaacataaaatcatatcaattacgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacg---cgtgagaga 161  Q
    |||||||||||| ||   || ||| |||||||||||||||||| || |||| |||||||||||||| |||||||||||||||||||||   |||||||||    
T  25084695 tcaacataaaataatgataaatacataacacatggaaaacaagcaa-atcctcatcccgttacgtagcagagcgaccctaagacgacgacacgtgagaga 25084793  T
Q  162 gtcaattcacttcaacagctattcttggttacctgc 197  Q
    ||||  ||||||||||| ||||| ||| || |||||    
T  25084794 gtcatctcacttcaacaactattattgatttcctgc 25084829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 65 - 248
Target Start/End: Complemental strand, 5033161 - 5032969
Alignment:
Q  65 tcaacataaaatcatatcaattacgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagcgaccctaa---gacgacgcgtgagaga 161  Q
    |||||||||||||||   || |||||||||||||||||||||| || |||  ||| | ||||||||||||||||| |||||   || ||| |||||||||    
T  5033161 tcaacataaaatcatgataaatacgtaacacatggaaaacaagcaa-atcttcattctgttacgtatcagagcgatcctaaggcgatgacacgtgagaga 5033063  T
Q  162 gtcaattcactt---caacagctattcttggttacctgcgcgttaccca--cgtagaggcaacatt--ccaccagaaggggtgagatttcacat 248  Q
    ||||  ||||||   ||||||||||||||| || |||||  ||||||||   ||| ||||||||||  | | ||||||||||||||||||||||    
T  5033062 gtcatctcacttcaacaacagctattcttgatttcctgcaagttacccaattgtaaaggcaacatttccaagcagaaggggtgagatttcacat 5032969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 187 - 248
Target Start/End: Complemental strand, 25588193 - 25588132
Alignment:
Q  187 tggttacctgcgcgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||| |||| ||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  25588193 tggttatctgcacgttacccacgtagaggcaacattcaaacagaaggggtgagatttcacat 25588132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 116 - 248
Target Start/End: Complemental strand, 36737560 - 36737430
Alignment:
Q  116 ccatcccgttacgtatcagagcgac-cctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagag 214  Q
    |||||||||||||||||||| |||| ||||||||||| || |   || |||| |||| ||| | | || |||||||||  ||| ||||||||||||||||    
T  36737560 ccatcccgttacgtatcagatcgactcctaagacgacacgag---gaatcaactcacatcagcggttactcttggttatatgcacgttacccacgtagag 36737464  T
Q  215 gcaacattccaccagaaggggtgagatttcacat 248  Q
     |||||||| | |||||||||||| |||||||||    
T  36737463 acaacattcaaacagaaggggtgaaatttcacat 36737430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 245
Target Start/End: Complemental strand, 14181092 - 14181034
Alignment:
Q  187 tggttacctgcgcgttacccacgtagaggcaacattccaccagaaggggtgagatttca 245  Q
    |||||| |||| ||||||||||||||||||||||||| | |||||||||||||||||||    
T  14181092 tggttatctgcacgttacccacgtagaggcaacattcaaacagaaggggtgagatttca 14181034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 117 - 248
Target Start/End: Complemental strand, 19197189 - 19197060
Alignment:
Q  117 catcccgttacgtatcagagcgac-cctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagagg 215  Q
    ||||||| |||||||||||| ||| ||||||||||| || |   || |||| |||| |||  || || || |||||| |||| |||||||||||||||||    
T  19197189 catcccgctacgtatcagagggactcctaagacgacacgag---gaatcaactcacatcagaagataatcatggttatctgcacgttacccacgtagagg 19197093  T
Q  216 caacattccaccagaaggggtgagatttcacat 248  Q
    |||||||| | |||||||||||| |||||||||    
T  19197092 caacattcaaacagaaggggtgatatttcacat 19197060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 247
Target Start/End: Original strand, 22685158 - 22685382
Alignment:
Q  22 cctcaacatagacaacttattaaaa--tccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaagt--aagatcccc 117  Q
    |||||||||| ||||||| ||||||  |||| |  | |||||||||||||||||  |||||  ||| |||||||| |||||||||||    || ||||||    
T  22685158 cctcaacataaacaacttcttaaaaattccatttcaaatggttcatcaacataat-tcataataat-acgtaacaaatggaaaacaatacaaatatcccc 22685255  T
Q  118 atcccgttacgtatcagagcgac-cctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagaggc 216  Q
    ||||||||||||||||||||||| ||||||| ||| |  |  |   |||| |||  ||| | | || || |||||| |||| |||| |||||||||||||    
T  22685256 atcccgttacgtatcagagcgactcctaagatgacacaagcaa---tcaactcatatcagcggttactcctggttatctgcacgtt-cccacgtagaggc 22685351  T
Q  217 aacattccaccagaaggggtgagatttcaca 247  Q
    ||||||| | |||||||||||||||||||||    
T  22685352 aacattcaaacagaaggggtgagatttcaca 22685382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 248
Target Start/End: Original strand, 22678293 - 22678415
Alignment:
Q  129 tatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttaccca--cgtagaggcaacatt--cc 224  Q
    ||||||||| | ||||||||||| |||||||||||| | ||||||||||||||| ||||| |||||||   ||||||||   |||  |||||||||  |     
T  22678293 tatcagagctatcctaagacgacacgtgagagagtc-actcacttcaacagctaatcttgattacctggaagttacccaattgtaagggcaacatttcca 22678391  T
Q  225 accagaaggggtgagatttcacat 248  Q
    | ||||||||||||||||||||||    
T  22678392 agcagaaggggtgagatttcacat 22678415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 117 - 197
Target Start/End: Original strand, 23759890 - 23759972
Alignment:
Q  117 catcccgttacgtatcagagcgaccctaagacgacg---cgtgagagagtcaattcacttcaacagctattcttggttacctgc 197  Q
    |||| |||||||||||||||||||||||||||||||   |||||||||||| | ||||||| | ||||| ||||| ||||||||    
T  23759890 catctcgttacgtatcagagcgaccctaagacgacgacacgtgagagagtcgactcacttc-atagctaatcttgattacctgc 23759972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 117 - 197
Target Start/End: Original strand, 24514523 - 24514605
Alignment:
Q  117 catcccgttacgtatcagagcgaccctaagacgacg---cgtgagagagtcaattcacttcaacagctattcttggttacctgc 197  Q
    ||||||||||||||||||||||||||||||||||||   |||| ||||||| | ||||||| ||| ||| ||||| ||||||||    
T  24514523 catcccgttacgtatcagagcgaccctaagacgacgacacgtgcgagagtcgactcacttc-acaactaatcttgattacctgc 24514605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 137
Target Start/End: Original strand, 26895407 - 26895535
Alignment:
Q  11 tggcacaatggcctcaacatagacaacttattaaaa-tccaatctagatggttcatcaacataaaa-tcata-tcaattacgtaacacatggaaaacaag 107  Q
    |||||||| ||||||||| || |||||||| ||||| |||| |||| |  || | ||||||||||| ||||| | ||| |||||| | |||||||||||     
T  26895407 tggcacaacggcctcaacttaaacaacttaataaaaatccagtctaaacagt-cttcaacataaaagtcataataaatcacgtaatatatggaaaacaat 26895505  T
Q  108 taagatccccatcccgttacgtatcagagc 137  Q
     |||||||||||||||||||||||||||||    
T  26895506 aaagatccccatcccgttacgtatcagagc 26895535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 117 - 175
Target Start/End: Original strand, 36838462 - 36838522
Alignment:
Q  117 catcccgttacgtatcagagcgaccctaaga--cgacgcgtgagagagtcaattcacttca 175  Q
    |||||||||||||||||||||||||||||||  |||| |||||||||||| | ||||||||    
T  36838462 catcccgttacgtatcagagcgaccctaagacgcgacacgtgagagagtcgactcacttca 36838522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 207
Target Start/End: Original strand, 17305764 - 17305857
Alignment:
Q  116 ccatcccgttacgtatcagagcgaccctaagacgacg---cgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttaccca 207  Q
    |||||| |||||||||||||| |||||||||||||||   |||||||||||| | ||||||| | ||||| ||||| ||||||||  ||||||||    
T  17305764 ccatcctgttacgtatcagagtgaccctaagacgacgacacgtgagagagtcgactcacttc-atagctaatcttgattacctgcaagttaccca 17305857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 248
Target Start/End: Complemental strand, 28346752 - 28346619
Alignment:
Q  113 tccccatcccgttacgtatcagagcgac-cctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgta 211  Q
    |||||||||||||||||||||||| ||| ||||||||||| || |   || |||| |||| | | | | || || | |||| |||| |||||||||||||    
T  28346752 tccccatcccgttacgtatcagagtgactcctaagacgacacgag---gaatcaactcacataagcggttactcctagttatctgcacgttacccacgta 28346656  T
Q  212 gaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||| ||||||| | || ||||||||| |||||||||    
T  28346655 gaggtaacattcaaacataaggggtgatatttcacat 28346619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 240
Target Start/End: Original strand, 19644416 - 19644469
Alignment:
Q  187 tggttacctgcgcgttacccacgtagaggcaacattccaccagaaggggtgaga 240  Q
    |||||| |||| ||||||||||||||||| ||||||| | ||||||||||||||    
T  19644416 tggttatctgcacgttacccacgtagaggtaacattcaaacagaaggggtgaga 19644469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 137
Target Start/End: Original strand, 21244913 - 21245041
Alignment:
Q  11 tggcacaatggcctcaacatagacaacttattaaaa-tccaatctagatggttcatcaacataaaa-tcata-tcaattacgtaacacatggaaaacaag 107  Q
    |||||||| ||||||||| || |||||||| ||||| |||| |||| |  || | ||||||||||| ||||| | ||| |||||||| |||||||||||     
T  21244913 tggcacaacggcctcaacttaaacaacttaataaaaatccagtctaaacagt-cttcaacataaaagtcataataaatcacgtaacatatggaaaacaat 21245011  T
Q  108 taagatccccatcccgttacgtatcagagc 137  Q
     |||||| |||||| |||||||||||||||    
T  21245012 aaagatctccatcctgttacgtatcagagc 21245041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 36733341 - 36733277
Alignment:
Q  184 tcttggttacctgcgcgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||| |||| |||||||||| |||||||||||||| | || ||| ||||| |||||||||    
T  36733341 tcttggttatctgcacgttacccacatagaggcaacattcaaacaaaagtggtgaaatttcacat 36733277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 19803277 - 19803327
Alignment:
Q  87 acgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagc 137  Q
    |||||||| |||||||||||  ||||||| || ||||||||||||||||||    
T  19803277 acgtaacatatggaaaacaataaagatccacaccccgttacgtatcagagc 19803327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 22702252 - 22702302
Alignment:
Q  87 acgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagc 137  Q
    |||||||| |||||||||||  ||||||| |||| ||||||||||||||||    
T  22702252 acgtaacatatggaaaacaataaagatcctcatctcgttacgtatcagagc 22702302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 248
Target Start/End: Complemental strand, 30212829 - 30212775
Alignment:
Q  194 ctgcgcgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||| ||||||||||||||||| |||| |  | ||||||||||||||||||||||    
T  30212829 ctgcacgttacccacgtagaggtaacagtaaaacagaaggggtgagatttcacat 30212775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 168; Significance: 4e-90; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 65484 - 65731
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgga 100  Q
    ||||| |||||||||||| | |||||||||| |||||||||||||||||||||||  ||  || |||||||||||||||| |||||| ||||||||||||    
T  65484 aacattgtaatggcacaacgacctcaacataaacaacttattaaaatccaatctaagtgaatcttcaacataaaatcatagcaattatgtaacacatgga 65583  T
Q  101 aaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcg 200  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||| |||||| ||||  |    
T  65584 aaacaagtaagatccccatcccgttacgtatcagagagaccctaagacgacgcgtgagatagtcaactcacttcaacagctattcctggttatctgcatg 65683  T
Q  201 ttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||    
T  65684 ttacccacgtagaggcaacattcaaacagaaggggtgagatttcacat 65731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 86 - 248
Target Start/End: Original strand, 14890 - 15054
Alignment:
Q  86 tacgtaacacatggaaaacaagtaagat--ccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctat 183  Q
    ||||||||| |||||||||||  || ||  | ||||||| ||||||||||||  ||||||||||||||||||||||||| ||| |||| |||| |||||     
T  14890 tacgtaacaaatggaaaacaacaaaaatatcaccatcccattacgtatcagaatgaccctaagacgacgcgtgagagagccaactcacatcaatagctaa 14989  T
Q  184 tcttggttacctgcgcgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    || |||||| ||||  ||||||||||||||| |||||||| | ||||||||||||||||||||||    
T  14990 tcctggttatctgcatgttacccacgtagagacaacattcaaacagaaggggtgagatttcacat 15054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 168; Significance: 4e-90; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 6 - 248
Target Start/End: Complemental strand, 22319513 - 22319271
Alignment:
Q  6 cgtaatggcacaatggcctcaacatagacaacttattaaaat-ccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaac 104  Q
    |||||||| |||| |||||||||||| ||||||||||||||| ||| ||||| ||||||| |||||||||||||||| ||| ||||||||||||||||||    
T  22319513 cgtaatggtacaacggcctcaacataaacaacttattaaaattccattctaggtggttcaacaacataaaatcatataaat-acgtaacacatggaaaac 22319415  T
Q  105 aagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttac 204  Q
    ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| |||| ||||||    
T  22319414 aaacaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaactcacttcaacagctattcctggttatctgcacgttac 22319315  T
Q  205 ccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||||||||| | ||||||||||||||||||||||    
T  22319314 ccacgtagaggcaacattcaaacagaaggggtgagatttcacat 22319271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 17908496 - 17908249
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgga 100  Q
    |||||||||||||||||| ||||||||| || |||||||||||||||||| |||||     || |||||||||||||||| || ||||||||||||||||    
T  17908496 aacatcgtaatggcacaacggcctcaacttaaacaacttattaaaatccagtctaggcaaatcttcaacataaaatcataacatttacgtaacacatgga 17908397  T
Q  101 aaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||| |||| |||| ||    
T  17908396 aaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgactcgtgagagagtcaactcacttcaacagctatccttagttatctgcacg 17908297  T
Q  201 ttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||||||||||||| | |||||||||||| |||||||||    
T  17908296 ttacccacgtagaggcaacattcaaacagaaggggtgaaatttcacat 17908249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 31724781 - 31724533
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgga 100  Q
    |||| ||||||||||||| |||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  31724781 aacaacgtaatggcacaacggcctcaacataaacaacttattaaaattcaatctagatgattcatcaacataaaatcatagcaattacgtaacacatgga 31724682  T
Q  101 aaacaagt-aagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgc 199  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||  |||| ||| |  | |||| |||| |    
T  31724681 aaacaagtaaagatccccatcccgttacgtatcaaagcgaccctaagacgacgcctgagagagtcaactcactagaacaactaattctagttatctgcac 31724582  T
Q  200 gttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||||| |||||||| | |||||||||||| |||||||||    
T  31724581 gttacccacgtagagacaacattcaaacagaaggggtgaaatttcacat 31724533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 22333762 - 22333957
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgga 100  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  22333762 aacatcgtaatggcataacggcctcaacatagacaacttattaaaatccaatctagatggttcttcaacataaaatcatataaattacgtaacacatgga 22333861  T
Q  101 aaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgc 197  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| | ||||||||||| ||| ||||| ||||||||    
T  22333862 aaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacatgtgagagagtc-actcacttcaacaactaatcttgattacctgc 22333957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 9 - 248
Target Start/End: Complemental strand, 18820917 - 18820676
Alignment:
Q  9 aatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaagt 108  Q
    |||||||| | |||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||  |||||| ||||| ||||||||| |      
T  18820917 aatggcactacggcctcaacataaacaacttattaaactccattctagatggttcatcaacataaaatcatagaaattacttaacaaatggaaaacgaca 18820818  T
Q  109 --aagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttaccc 206  Q
      || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || || |||||| |||| ||||||||    
T  18820817 caaatatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaactcacttcaacagttaatcctggttatctgcacgttaccc 18820718  T
Q  207 acgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||||||| | ||||||||||||||||||||||    
T  18820717 acgtagaggcaacattcaaacagaaggggtgagatttcacat 18820676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 45472008 - 45471764
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgga 100  Q
    |||| ||||||||||||| || ||||||||| ||||||||||||| |||| ||| | ||||| ||||||||||||| |||  ||| ||||||||||||||    
T  45472008 aacaacgtaatggcacaacggtctcaacataaacaacttattaaactccattctgggtggtttatcaacataaaat-atagaaat-acgtaacacatgga 45471911  T
Q  101 aaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcg 200  Q
    ||||||| ||||||  ||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||| |||||| |||||| |||| ||    
T  45471910 aaacaagcaagatcttcatcccgttacgtatcagagcgatcctaagatgacgcgtgagagagtcaactcacttcaacaactattcctggttatctgcacg 45471811  T
Q  201 ttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||||||||||||| | ||||| ||||||||||||||||    
T  45471810 ttacccacgtagaggcaacattcaaacagaa-gggtgagatttcacat 45471764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 11 - 248
Target Start/End: Original strand, 23946773 - 23947011
Alignment:
Q  11 tggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaagtaa 110  Q
    |||||||| ||||||||| || |||||||||||||||||| ||||||    || ||||||||||||||||  || ||||||| |||||||||||||| ||    
T  23946773 tggcacaacggcctcaacttaaacaacttattaaaatccagtctagacaaatcttcaacataaaatcataataaatacgtaatacatggaaaacaagcaa 23946872  T
Q  111 gatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggtt-acctgcgcgttacccacg 209  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||| ||| |||| || | |||| |||||||||||    
T  23946873 gatccccattccgttacgtatcagagcgaccctaagacgacacgtgagagagtctactcacttcaacagatatccttgattaatctgcacgttacccacg 23946972  T
Q  210 tagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||||||||||| | ||||||||||||||||||||||    
T  23946973 tagaggcaacattcaaacagaaggggtgagatttcacat 23947011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 23888212 - 23888457
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgga 100  Q
    |||||||||||||||||| ||||||||| || ||||||||||||| |||| |||||     || ||||||||||  |||| |||||||||| ||||||||    
T  23888212 aacatcgtaatggcacaacggcctcaacttaaacaacttattaaa-tccagtctaggaaaatcttcaacataaac-cataacaattacgtatcacatgga 23888309  T
Q  101 aaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcg 200  Q
    ||||||||||||||| |||| ||||||| |||||||||||||||| |||||||||||||||||||| |||||||| ||||||| ||||||||  ||| ||    
T  23888310 aaacaagtaagatcctcatctcgttacgcatcagagcgaccctaatacgacgcgtgagagagtcaactcacttcagcagctatccttggttatttgcacg 23888409  T
Q  201 ttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||||||||||||| | ||||| ||||||||||||||||    
T  23888410 ttacccacgtagaggcaacattcaaacagaatgggtgagatttcacat 23888457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 5079380 - 5079627
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaat-ccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgg 99  Q
    |||| ||||||||||||| |||||||| ||| ||||||| ||||||| ||| ||||| ||||||||||||||||| |||||  ||| |||||||| ||||    
T  5079380 aacaacgtaatggcacaacggcctcaatataaacaacttgttaaaattccattctaggtggttcatcaacataaa-tcataaaaat-acgtaacatatgg 5079477  T
Q  100 aaaacaa-gtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcg 198  Q
    ||||||| | ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||  |||||||||||| ||| ||||     
T  5079478 aaaacaaagcaagatcctcatcccgttacgtatcatagcgaccctaagacgacgcgtgagagagtcaactcacatccgcagctattcttgattatctgca 5079577  T
Q  199 cgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
     |||||||||||||||||||||||| | |||||||| |||||||||||||    
T  5079578 tgttacccacgtagaggcaacattcaaacagaagggttgagatttcacat 5079627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 9 - 248
Target Start/End: Complemental strand, 6574795 - 6574555
Alignment:
Q  9 aatggcacaatggcctcaacatagacaacttattaaaat-ccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaag 107  Q
    |||||||| | ||||| |||||| ||||||||||||||| ||| ||||  ||||||||||||||||  |||||  ||| |||||||||| |||||||||     
T  6574795 aatggcactacggcctaaacataaacaacttattaaaattccattctaagtggttcatcaacataat-tcataaaaat-acgtaacacaaggaaaacaat 6574698  T
Q  108 t--aagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacc 205  Q
    |  ||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||| ||||| ||||||||| || |||||| |||| |||||||    
T  6574697 tcaaagatccccatcctgttatgtatcagagcgaccctaagacgacacgtgagagagtcaactcactccaacagctaatcctggttatctgcacgttacc 6574598  T
Q  206 cacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||||||||||||||| | ||||||||||||||||||||||    
T  6574597 cacgtagaggcaacattcaaacagaaggggtgagatttcacat 6574555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 109 - 248
Target Start/End: Complemental strand, 20025707 - 20025568
Alignment:
Q  109 aagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccac 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| |||| ||||||||||    
T  20025707 aagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaaatcacttcaacagctattcctggttatctgcacgttacccac 20025608  T
Q  209 gtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  20025607 gtagaggcaacattcaaacagaaggggtgagatttcacat 20025568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 36729584 - 36729336
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaat-ccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgg 99  Q
    |||| ||||||||||||||| |||||||||| ||||||||||||||| ||| ||||| | ||||||||||||||  |||||  ||| |||||||| ||||    
T  36729584 aacaacgtaatggcacaatgacctcaacataaacaacttattaaaattccattctaggtagttcatcaacataat-tcataataat-acgtaacaaatgg 36729487  T
Q  100 aaaacaagt--aagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgc 197  Q
    |||||||    || |||  |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||| || ||||||  |||    
T  36729486 aaaacaacacaaatatcatcatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaactcacctcaacaactaatcctggttatatgc 36729387  T
Q  198 gcgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
     ||||||||||||||| ||||||||| | ||||||||||||||||||||||    
T  36729386 acgttacccacgtagatgcaacattcaaacagaaggggtgagatttcacat 36729336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 19664268 - 19664516
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgga 100  Q
    ||||||||  |||||||| ||||||||| || |||||||||||||||||| | || |    || ||||||||||||||||  || |||||||||||||||    
T  19664268 aacatcgtgttggcacaacggcctcaacttaaacaacttattaaaatccagtttaaacaaatcttcaacataaaatcataataaatacgtaacacatgga 19664367  T
Q  101 aaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcg 200  Q
    ||||||  || ||||||||||||||||||||||||| ||||||||||||||  ||||||||||||| ||||||||||| ||||||||| ||||||||  |    
T  19664368 aaacaacaaa-atccccatcccgttacgtatcagagtgaccctaagacgacaggtgagagagtcaactcacttcaacaactattcttgattacctgcaag 19664466  T
Q  201 ttacccacgtagaggcaacatt--ccaccagaaggggtgagatttcacat 248  Q
    |||||||| |||||||||||||  | | ||||||| ||||||||||||||    
T  19664467 ttacccacatagaggcaacatttccaagcagaaggagtgagatttcacat 19664516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 17217071 - 17217318
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgga 100  Q
    ||||||||| |||||||||||||||||| || |||||||||||||||| | |||||     || ||||||||||  ||||  ||||||||||| ||||||    
T  17217071 aacatcgtattggcacaatggcctcaacttaaacaacttattaaaatctagtctaggcaaatcttcaacataaac-cataataattacgtaactcatgga 17217169  T
Q  101 aaacaagtaa-gatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggtt-acctgcg 198  Q
    |||||||||| ||| |||||||||||||| |||||||||||||||||||||| |||||||||||| | |||||||||||  ||| |||| || | ||||     
T  17217170 aaacaagtaaagattcccatcccgttacgaatcagagcgaccctaagacgacacgtgagagagtc-actcacttcaacatttatccttgattaatctgca 17217268  T
Q  199 cgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  17217269 cgttacccacgtagaggcaacattcaaacagaaggggtgagatttcacat 17217318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 22243889 - 22244136
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgga 100  Q
    |||||| ||||||||||| ||||||||| || |||||||||||||||||| ||||||    || |||||||||| |  || |||||||||||||||||||    
T  22243889 aacatcataatggcacaacggcctcaacttaaacaacttattaaaatccagtctagacaaatcttcaacataaactg-taacaattacgtaacacatgga 22243987  T
Q  101 aaacaagtaa-gatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggtt-acctgcg 198  Q
    |||||||||| ||| || |||||||||||||||||||||||||||||||||| |||||||| ||| | |||||||||||||||| |||| || | ||||     
T  22243988 aaacaagtaaagattcctatcccgttacgtatcagagcgaccctaagacgacacgtgagagggtc-actcacttcaacagctatccttgattaatctgca 22244086  T
Q  199 cgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
     |||| |||||||||| |||||||| | ||||||||||||||||||||||    
T  22244087 tgttaaccacgtagagacaacattcaaacagaaggggtgagatttcacat 22244136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 12799884 - 12800131
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgga 100  Q
    |||| ||||||||||||| |||||||||||| ||||||||| ||| |||| ||||| ||||||||||||||||  |||||  ||| | |||||| |||||    
T  12799884 aacaacgtaatggcacaacggcctcaacataaacaacttataaaactccattctaggtggttcatcaacataat-tcatagtaat-atgtaacaaatgga 12799981  T
Q  101 aaacaagt--aagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcg 198  Q
    ||| ||    || ||||||||||| ||||||||||||| |||||||||||||| |||||||||||||| ||||||||| || || || |||||| ||||     
T  12799982 aaagaacacaaatatccccatcccattacgtatcagagtgaccctaagacgacacgtgagagagtcaactcacttcaatagttaatcctggttatctgca 12800081  T
Q  199 cgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||||||||||||||| | ||||| ||||||||||||||||    
T  12800082 cgttacccacgtagaggcaacattcaaacagaatgggtgagatttcacat 12800131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 25850064 - 25849812
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaa-tccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgg 99  Q
    ||||||||  |||||||||||||||||| || |||||||||||||| | || | || |    || ||||||||||||||||  || ||||||||||||||    
T  25850064 aacatcgtgttggcacaatggcctcaacttaaacaacttattaaaaattcagtttaaacaaatcttcaacataaaatcataataaatacgtaacacatgg 25849965  T
Q  100 aaaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacg---cgtgagagagtcaattcacttcaacagctattcttggttacctg 196  Q
    ||||||   || |||||||||||||||||||||||||||||||||||||||||   |||||||||||||| ||||||||||| | |||||||||||||||    
T  25849964 aaaacatcaaa-atccccatcccgttacgtatcagagcgaccctaagacgacgacacgtgagagagtcaactcacttcaacaaccattcttggttacctg 25849866  T
Q  197 cgcgttacccacgtagaggcaacatt--ccaccagaaggggtgagatttcacat 248  Q
    |  |||||||||||||||||||||||  | | || ||||||||| |||||||||    
T  25849865 caagttacccacgtagaggcaacatttccaagcataaggggtgaaatttcacat 25849812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 109 - 248
Target Start/End: Original strand, 38987828 - 38987967
Alignment:
Q  109 aagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccac 208  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||| || |||||| |||| | ||||||||    
T  38987828 aagatccacatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaactcacatcaacaactaatcctggttatctgcacattacccac 38987927  T
Q  209 gtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  38987928 gtagaggcaacattcaaacagaaggggtgagatttcacat 38987967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 109 - 248
Target Start/End: Original strand, 39018925 - 39019064
Alignment:
Q  109 aagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccac 208  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||| || |||||| |||| | ||||||||    
T  39018925 aagatccacatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaactcacatcaacaactaatcctggttatctgcacattacccac 39019024  T
Q  209 gtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  39019025 gtagaggcaacattcaaacagaaggggtgagatttcacat 39019064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 22585300 - 22585051
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgga 100  Q
    ||||||||  |||||||| | ||||||| || |||||||||||||||||| | || |    || ||||  || |||||||  || |||| ||||||||||    
T  22585300 aacatcgtgttggcacaacgacctcaacttaaacaacttattaaaatccagtttaaacaaatcttcaatgtagaatcataataaatacgcaacacatgga 22585201  T
Q  101 aaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcg 200  Q
    || |||| |||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||| |||| |||||||   |    
T  22585200 aaccaagcaagatccccatccccttacgtatcagagcgaccctaagacgacatgtgagagagtcaactcacttcaacagctatccttgattacctgaaag 22585101  T
Q  201 ttacccacgtagaggcaacattcc--accagaaggggtgagatttcacat 248  Q
    |||| ||||||||||||||||| |  |  |||||||||||||||||||||    
T  22585100 ttacacacgtagaggcaacatttccaagaagaaggggtgagatttcacat 22585051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 11 - 248
Target Start/End: Original strand, 23417839 - 23418080
Alignment:
Q  11 tggcacaatggcctcaacatagacaactta-ttaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaagta 109  Q
    |||||||| | ||||||| || |||||||| |||||||||| | || ||   || |||||||||||||||   || |||||||||||||||||||||| |    
T  23417839 tggcacaacgacctcaacttaaacaacttaattaaaatccagtttaaataaatcttcaacataaaatcatgataaatacgtaacacatggaaaacaagaa 23417938  T
Q  110 agatccccatcccgttacgtatcagagcgaccctaagacgacg---cgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttaccc 206  Q
    | ||||||||||||||| |||||||||||||||||||||||||   |||||||||||||  ||||||||||||||||||||| ||||||||  |||||||    
T  23417939 a-atccccatcccgttaagtatcagagcgaccctaagacgacgacacgtgagagagtcatctcacttcaacagctattcttgattacctgcaagttaccc 23418037  T
Q  207 acgtagaggcaacatt--ccaccagaaggggtgagatttcacat 248  Q
    | ||||||||||||||  | | ||||| ||||||||||||||||    
T  23418038 atgtagaggcaacatttccaagcagaa-gggtgagatttcacat 23418080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 9 - 238
Target Start/End: Complemental strand, 17980165 - 17979935
Alignment:
Q  9 aatggcacaatggcctcaacatagacaacttattaaaat-ccaatctagatggttcatcaacataaaatcatatcaat-tacgtaacacatggaaaacaa 106  Q
    |||||||| |||||||||| ||| ||||||||||||||| ||| ||||| ||||| ||||||||||  |||||  ||| ||||||||| | |||||||||    
T  17980165 aatggcaccatggcctcaatataaacaacttattaaaattccattctaggtggttgatcaacataat-tcata--aatatacgtaacaaaaggaaaacaa 17980069  T
Q  107 gt--aagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttac 204  Q
        ||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||| ||| |  |||||  |||| ||||||    
T  17980068 tgcaaagatcttcatcccgttacgtatcagagcgaccctaagatgacgcgtgagagagtcaactcacatcaacatctaattatggttttctgcacgttac 17979969  T
Q  205 ccacgtagaggcaacattccaccagaaggggtga 238  Q
    ||||||||||||||||||| | ||||||||||||    
T  17979968 ccacgtagaggcaacattcaaacagaaggggtga 17979935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 39696410 - 39696160
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgga 100  Q
    ||||||||  |||||||| ||||| ||| || |||||||||||||||||| ||||||    |  ||| ||||||||||||  || |||||||||||||||    
T  39696410 aacatcgtgttggcacaacggccttaacttaaacaacttattaaaatccagtctagacaaattttcagcataaaatcataataaatacgtaacacatgga 39696311  T
Q  101 aaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcg 200  Q
    ||||||| || |||| ||||||||||||||||||||||||||||||||||| |||| ||||||| | |||||||||||||||  |||| ||||||||  |    
T  39696310 aaacaagcaaaatcctcatcccgttacgtatcagagcgaccctaagacgacacgtgtgagagtc-actcacttcaacagctaaccttgattacctgcaag 39696212  T
Q  201 ttaccca--cgtagaggcaacatt--ccaccagaaggggtgagatttcacat 248  Q
    ||| |||   ||| ||||||||||  | | ||||||| ||||||||||||||    
T  39696211 ttatccaattgtaaaggcaacatttccaagcagaaggtgtgagatttcacat 39696160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 57 - 242
Target Start/End: Original strand, 22343497 - 22343682
Alignment:
Q  57 atggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaagt--aagatccccatcccgttacgtatcagagcgaccctaagacgacgcg 154  Q
    |||||||||||||||||  |||||  ||| |||||||| |||||||||||    || |||||||||||||||| ||||||||||||||||||||||||||    
T  22343497 atggttcatcaacataat-tcataataat-acgtaacaaatggaaaacaatacaaatatccccatcccgttacatatcagagcgaccctaagacgacgcg 22343594  T
Q  155 tgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagaggcaacattccaccagaaggggtgagatt 242  Q
    |||||||||||| |||| ||| |||||| || |||||| |||| ||||||||| |||| |||||||||| | ||||||||||||||||    
T  22343595 tgagagagtcaactcacatcagcagctaatcctggttatctgcacgttacccatgtaggggcaacattcaaacagaaggggtgagatt 22343682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 57 - 242
Target Start/End: Original strand, 22355157 - 22355342
Alignment:
Q  57 atggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaagt--aagatccccatcccgttacgtatcagagcgaccctaagacgacgcg 154  Q
    |||||||||||||||||  |||||  ||| |||||||| |||||||||||    || |||||||||||||||| ||||||||||||||||||||||||||    
T  22355157 atggttcatcaacataat-tcataataat-acgtaacaaatggaaaacaatacaaatatccccatcccgttacatatcagagcgaccctaagacgacgcg 22355254  T
Q  155 tgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagaggcaacattccaccagaaggggtgagatt 242  Q
    |||||||||||| |||| ||| |||||| || |||||| |||| ||||||||| |||| |||||||||| | ||||||||||||||||    
T  22355255 tgagagagtcaactcacatcagcagctaatcctggttatctgcacgttacccatgtaggggcaacattcaaacagaaggggtgagatt 22355342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 112 - 248
Target Start/End: Complemental strand, 22480652 - 22480516
Alignment:
Q  112 atccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgta 211  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||| ||| |||||| || |||||| |||| |||||||||||||    
T  22480652 atccccatcctgttacgtatcagagcgacactaagacgacgcgtgagagagtcaactcacatcagcagctaatcctggttatctgcacgttacccacgta 22480553  T
Q  212 gaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||| |||||||   ||||||||||||||||||||||    
T  22480552 gaggaaacattcatacagaaggggtgagatttcacat 22480516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 122 - 247
Target Start/End: Original strand, 21512823 - 21512948
Alignment:
Q  122 cgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagaggcaacat 221  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||| || |  |||||| |||| |||||||||||||||||||||||    
T  21512823 cgttacgtatcagagcgaccctgagacgacgcgtgagagagtcaactcacatcaacagttaattctggttatctgcacgttacccacgtagaggcaacat 21512922  T
Q  222 tccaccagaaggggtgagatttcaca 247  Q
    || | |||||||||||||||||||||    
T  21512923 tcaaacagaaggggtgagatttcaca 21512948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 6103504 - 6103368
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgga 100  Q
    ||||||||| |||||||| ||||||||| || |||||||||||||||||| |||||     || |||||||||||||| | | | |||||||||||||||    
T  6103504 aacatcgtagtggcacaacggcctcaacttaaacaacttattaaaatccagtctaggcaaatcttcaacataaaatcaaaacgaatacgtaacacatgga 6103405  T
Q  101 aaacaagtaagatccccatcccgttacgtatcagagc 137  Q
    ||||||||||||||||||| |||||||||||||||||    
T  6103404 aaacaagtaagatccccattccgttacgtatcagagc 6103368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 65 - 248
Target Start/End: Original strand, 8694 - 8875
Alignment:
Q  65 tcaacataaaatcatatcaattacgtaacacatggaaaa-caagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagt 163  Q
    ||||||||||||||||  || || |||||||||| |||| |||| || ||||||||| |||||||||||||||| ||||||||||||| |||    ||||    
T  8694 tcaacataaaatcataataaatatgtaacacatgcaaaaacaagcaaaatccccatctcgttacgtatcagagcaaccctaagacgacacgt----gagt 8789  T
Q  164 caattcacttcaacagctattcttggttacctgcgcgttacccacgtagaggcaacatt--ccaccagaaggggtgagatttcacat 248  Q
    | | |||| |||||||||| ||||||||||||||  |||||||||||||||||||||||  | | ||||| | ||||||||||||||    
T  8790 c-actcacatcaacagctaatcttggttacctgcaagttacccacgtagaggcaacatttccaagcagaatgagtgagatttcacat 8875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 20453500 - 20453680
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgga 100  Q
    |||||||||||||||||| | ||| ||| || | |||||||||||||||| ||| ||    |  |||||||||| |||||  ||  || |||||||||||    
T  20453500 aacatcgtaatggcacaacgaccttaacttaaaaaacttattaaaatccagtcttgacaaatgttcaacataaattcataataaacacataacacatgga 20453599  T
Q  101 aaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagcta 182  Q
    ||||||  || ||| ||||||||||| |||||||||||||||||||||||| |||||||||||| | |||||||||||||||    
T  20453600 aaacaaacaacatctccatcccgttatgtatcagagcgaccctaagacgacacgtgagagagtc-actcacttcaacagcta 20453680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 65 - 248
Target Start/End: Original strand, 21398483 - 21398670
Alignment:
Q  65 tcaacataaaatcatatcaattacgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacg---cgtgagaga 161  Q
    |||||||||||||||   || |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||   |||||||||    
T  21398483 tcaacataaaatcatgataaatacgtaacacatggaaaacaagcaa-atccccatcccgttacgtatcagagcgaccctaagacgacgacacgtgagaga 21398581  T
Q  162 gtcaattcacttcaacagctattcttggttacctgcgcgttaccc--acgtagaggcaac-attcc-accagaaggggtgagatttcacat 248  Q
    ||||  | ||||| |||||||  |||| ||||||||  |||||||  ||| ||| ||||| ||||| | ||||||||||||||||||||||    
T  21398582 gtcatcttacttc-acagctaaacttgattacctgcaagttacccatacgaaga-gcaacaattccaagcagaaggggtgagatttcacat 21398670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 65 - 248
Target Start/End: Original strand, 21792976 - 21793163
Alignment:
Q  65 tcaacataaaatcatatcaattacgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacg---cgtgagaga 161  Q
    |||||||||||||||   || |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||   |||||||||    
T  21792976 tcaacataaaatcatgataaatacgtaacacatggaaaacaagcaa-atccccatcccgttacgtatcagagcgaccctaagacgacgacacgtgagaga 21793074  T
Q  162 gtcaattcacttcaacagctattcttggttacctgcgcgttaccc--acgtagaggcaac-attcc-accagaaggggtgagatttcacat 248  Q
    ||||  | ||||| |||||||  |||| ||||||||  |||||||  ||| ||| ||||| ||||| | ||||||||||||||||||||||    
T  21793075 gtcatcttacttc-acagctaaacttgattacctgcaagttacccatacgaaga-gcaacaattccaagcagaaggggtgagatttcacat 21793163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 109 - 245
Target Start/End: Complemental strand, 2718417 - 2718283
Alignment:
Q  109 aagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccac 208  Q
    ||||||| |||||| |||||||||||||||||||||||||||||  |||||||||||| |||| |||||| ||| || |||||| |||| |||||||||     
T  2718417 aagatcctcatcccattacgtatcagagcgaccctaagacgacga-tgagagagtcaactcacatcaacaactaatcatggttatctgcacgttacccat 2718319  T
Q  209 gtagaggcaacattccaccagaaggggtgagatttca 245  Q
    ||| ||||||||||| | ||||| |||||||||||||    
T  2718318 gtaaaggcaacattcaaacagaa-gggtgagatttca 2718283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 65 - 248
Target Start/End: Complemental strand, 20180291 - 20180102
Alignment:
Q  65 tcaacataaaatcatatcaattacgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacg---acgcgtgagaga 161  Q
    |||||||||||||||   || |||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||   || |||||||||    
T  20180291 tcaacataaaatcatgataaatacgtaacacatggaaaacaagcaa-atctccatcccgttacgtatcagagcgaccctaagacgactacacgtgagaga 20180193  T
Q  162 gtcaattcacttcaacagctattcttggttacctgcgcgttaccca--cgtagaggcaacatt--ccaccagaaggggtgagatttcacat 248  Q
     |||  ||||||||||| ||||||||| || |||||  ||||| ||   |||  |||||||||  | | ||||||||||||||||||||||    
T  20180192 atcatctcacttcaacaactattcttgatttcctgcaagttactcaattgtaagggcaacatttccaagcagaaggggtgagatttcacat 20180102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 11 - 207
Target Start/End: Complemental strand, 42267378 - 42267182
Alignment:
Q  11 tggcacaatggcctcaacatagacaacttatt-aaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaagta 109  Q
    |||||||| ||||||||| || |||||||||| ||||||||  |||||    || |||||||||  |||||  || |||| ||||||||||||||||  |    
T  42267378 tggcacaacggcctcaacttaaacaacttatttaaaatccagcctagacaaatcttcaacataatttcataataaatacgcaacacatggaaaacaatca 42267279  T
Q  110 agatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttaccca 207  Q
    |||||| | || |||||||||||||||||||||||||||||| |||||||||||| | ||||||||| |||||   ||| ||||||||  ||||||||    
T  42267278 agatccacttctcgttacgtatcagagcgaccctaagacgacacgtgagagagtc-actcacttcaatagctaacattgattacctgcaagttaccca 42267182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 8 - 107
Target Start/End: Complemental strand, 20047982 - 20047884
Alignment:
Q  8 taatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaag 107  Q
    ||||||||||| | |||||||||| ||||||||||||| |||| ||||| || ||||||||||||||||||||  || ||||||||||||||||||||||    
T  20047982 taatggcacaacgacctcaacataaacaacttattaaactccattctaggtgcttcatcaacataaaatcata-gaaatacgtaacacatggaaaacaag 20047884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 113 - 248
Target Start/End: Complemental strand, 12038652 - 12038519
Alignment:
Q  113 tccccatcccgttacgtatcagagcgac-cctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgta 211  Q
    |||||||||||||||||||||||||||| ||||||||||| || |   || |||| |||| ||| | | || || |||||| |||| |||||||||| ||    
T  12038652 tccccatcccgttacgtatcagagcgactcctaagacgacacgag---gaatcaactcacatcagcggttactcctggttatctgcacgttacccacata 12038556  T
Q  212 gaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||||||||| | ||||||||||||||||||||||    
T  12038555 gaggcaacattcaaacagaaggggtgagatttcacat 12038519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 112 - 248
Target Start/End: Complemental strand, 21684174 - 21684040
Alignment:
Q  112 atccccatcccgttacgtatcagagcgacc-ctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgt 210  Q
    |||||||||||||||||||||||||||||  |||||||||| || |   || |||| |||| ||| | | || || |||||| |||| | ||||||||||    
T  21684174 atccccatcccgttacgtatcagagcgacttctaagacgacacgag---gaatcaactcacatcagcggttactcctggttatctgcacattacccacgt 21684078  T
Q  211 agaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||| | ||||||||||||||||||||||    
T  21684077 agaggcaacattcaaacagaaggggtgagatttcacat 21684040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 112 - 248
Target Start/End: Complemental strand, 21688523 - 21688389
Alignment:
Q  112 atccccatcccgttacgtatcagagcgacc-ctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgt 210  Q
    |||||||||||||||||||||||||||||  |||||||||| || |   || |||| |||| ||| | | || || |||||| |||| | ||||||||||    
T  21688523 atccccatcccgttacgtatcagagcgacttctaagacgacacgag---gaatcaactcacatcagcggttactcctggttatctgcacattacccacgt 21688427  T
Q  211 agaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||| | ||||||||||||||||||||||    
T  21688426 agaggcaacattcaaacagaaggggtgagatttcacat 21688389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 122 - 248
Target Start/End: Complemental strand, 21677793 - 21677669
Alignment:
Q  122 cgttacgtatcagagcgac-cctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagaggcaaca 220  Q
    ||||||||||||||||||| ||||||||||| |  |   || |||| |||| |||||   || ||||||||| ||||  |||||||||||||||||||||    
T  21677793 cgttacgtatcagagcgactcctaagacgacacaag---gaatcaactcacatcaacgattactcttggttatctgcatgttacccacgtagaggcaaca 21677697  T
Q  221 ttccaccagaaggggtgagatttcacat 248  Q
    ||| | ||||||||||||||||||||||    
T  21677696 ttcaaacagaaggggtgagatttcacat 21677669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 117 - 207
Target Start/End: Complemental strand, 18303560 - 18303467
Alignment:
Q  117 catcccgttacgtatcagagcgaccctaagac---gacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttaccca 207  Q
    ||||||||||||||||||||||||||||||||   ||| |||||||||||||| ||||||||||| |||   ||| ||||||||  ||||||||    
T  18303560 catcccgttacgtatcagagcgaccctaagacgaagacacgtgagagagtcaactcacttcaacaactaactttgattacctgcaagttaccca 18303467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 248
Target Start/End: Complemental strand, 20518675 - 20518541
Alignment:
Q  112 atccccatcccgttacgtatcagagcgac-cctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgt 210  Q
    ||||||||||||||||||||||||||||| ||||||||||| || |   || |||| |||| |||   | || || |||||| ||||  |||||||||||    
T  20518675 atccccatcccgttacgtatcagagcgactcctaagacgacacgag---gaatcaactcacatcattggttactcctggttatctgcatgttacccacgt 20518579  T
Q  211 agaggcaacattccaccagaaggggtgagatttcacat 248  Q
    | ||||||||||| | ||||||| ||||||||||||||    
T  20518578 aaaggcaacattcaaacagaaggagtgagatttcacat 20518541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 113 - 248
Target Start/End: Complemental strand, 36406961 - 36406828
Alignment:
Q  113 tccccatcccgttacgtatcagagcgac-cctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgta 211  Q
    ||||||||| |||||||||||||||||| ||||||||||| |  |   || |||| |||| ||| | | || || |||||| |||| | ||||||| |||    
T  36406961 tccccatcctgttacgtatcagagcgactcctaagacgacacaag---gaatcaactcacatcagcggttactcctggttatctgcacattacccatgta 36406865  T
Q  212 gaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||||||||| | ||||||||||||||||||||||    
T  36406864 gaggcaacattcaaacagaaggggtgagatttcacat 36406828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 113 - 248
Target Start/End: Complemental strand, 36734213 - 36734081
Alignment:
Q  113 tccccatcccgttacgtatcagagcgac-cctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgta 211  Q
    |||||||||||||||||||||||||||| ||||||||||| |  |   || |||| |||| ||| | | || || || ||| |||| |||||||||||||    
T  36734213 tccccatcccgttacgtatcagagcgactcctaagacgacacaag---gaatcaactcacatcagcggttactcctg-ttatctgcacgttacccacgta 36734118  T
Q  212 gaggcaacattccaccagaaggggtgagatttcacat 248  Q
    || ||||||||| | ||||||||||||||||||||||    
T  36734117 gatgcaacattcaaacagaaggggtgagatttcacat 36734081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 11 - 137
Target Start/End: Complemental strand, 41682569 - 41682441
Alignment:
Q  11 tggcacaatggcctcaacatagacaacttattaaaa-tccaatctagatggttcatcaacataaaa-tcata-tcaattacgtaacacatggaaaacaag 107  Q
    |||||||| ||||||||| || |||||||| ||||| |||| |||| |  || | ||||||||||| ||||| | ||| |||||||| |||||||||||     
T  41682569 tggcacaacggcctcaacttaaacaacttaataaaaatccagtctaaacagt-cttcaacataaaagtcataataaatcacgtaacatatggaaaacaat 41682471  T
Q  108 taagatccccatcccgttacgtatcagagc 137  Q
     |||||||||||||||||||||||||||||    
T  41682470 aaagatccccatcccgttacgtatcagagc 41682441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 144
Target Start/End: Original strand, 19878576 - 19878711
Alignment:
Q  11 tggcacaatggcctcaacatagacaacttattaaaa-tccaatctagatggttcatcaacataaaa-tcata-tcaattacgtaacacatggaaaacaag 107  Q
    |||||||| ||||||||| || |||||||| ||||| |||| |||| |  || | ||||||||||| ||||| | ||| |||||||| |||||||||||     
T  19878576 tggcacaacggcctcaacttaaacaacttaataaaaatccagtctaaacagt-cttcaacataaaagtcataataaatcacgtaacatatggaaaacaat 19878674  T
Q  108 taagatccccatcccgttacgtatcagagcgacccta 144  Q
     || ||||| |||||||||||||||||||||||||||    
T  19878675 aaatatcccgatcccgttacgtatcagagcgacccta 19878711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 248
Target Start/End: Original strand, 20878257 - 20878391
Alignment:
Q  112 atccccatcccgttacgtatcagagcgac-cctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgt 210  Q
    |||| ||||| |||||||||||||||||| |||||||| || || |   || |||| ||||  || ||| || || |||||| |||| ||||||||||||    
T  20878257 atccacatcctgttacgtatcagagcgactcctaagacaacacgag---gaatcaactcacaccagcagttactcctggttatctgcacgttacccacgt 20878353  T
Q  211 agaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||| ||||||| | ||||| ||||||||||||||||    
T  20878354 agaggtaacattcaaacagaaagggtgagatttcacat 20878391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 248
Target Start/End: Original strand, 23885136 - 23885266
Alignment:
Q  116 ccatcccgttacgtatcagagcgac-cctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagag 214  Q
    ||||||||||||||||||||||||| ||||||||||| |   || || |||| | |  ||| | ||||||| | |||| |||| |||||||||| |||||    
T  23885136 ccatcccgttacgtatcagagcgactcctaagacgacac---agggaatcaactaaaatcagcggctattcctagttatctgcacgttacccacatagag 23885232  T
Q  215 gcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||  | ||||||| ||||||||||||||    
T  23885233 gcaacatttaaacagaaggagtgagatttcacat 23885266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 207
Target Start/End: Complemental strand, 45118734 - 45118642
Alignment:
Q  117 catcccgttacgtatcagagcgaccctaagacgacg---cgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttaccca 207  Q
    ||||| ||||||||||||||||||||||||||||||   |||||||||||| | ||||||| | ||||| ||||| ||||||||  ||||||||    
T  45118734 catccagttacgtatcagagcgaccctaagacgacgacacgtgagagagtcgactcacttc-atagctaatcttgattacctgcaagttaccca 45118642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 19881325 - 19881375
Alignment:
Q  87 acgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagc 137  Q
    |||||||| |||||||||||  |||||||||||||||||||||||||||||    
T  19881325 acgtaacatatggaaaacaataaagatccccatcccgttacgtatcagagc 19881375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 248
Target Start/End: Complemental strand, 22709401 - 22709347
Alignment:
Q  194 ctgcgcgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||| ||||||||||||||||| ||||||| | ||||||||||||||||||||||    
T  22709401 ctgcacgttacccacgtagaggtaacattcaaacagaaggggtgagatttcacat 22709347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 248
Target Start/End: Complemental strand, 22615917 - 22615871
Alignment:
Q  202 tacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||||||||||||||||||| | ||||| ||||||||||||||||    
T  22615917 tacccacgtagaggcaacattcaaacagaatgggtgagatttcacat 22615871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 24977513 - 24977563
Alignment:
Q  87 acgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagc 137  Q
    |||||||| | |||||||||  |||||||||||||||||||||||||||||    
T  24977513 acgtaacataaggaaaacaataaagatccccatcccgttacgtatcagagc 24977563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 248
Target Start/End: Original strand, 38050054 - 38050115
Alignment:
Q  187 tggttacctgcgcgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||| ||||  |||||||||||||| ||||||||| | |||||| |||||||||||||||    
T  38050054 tggttatctgcaggttacccacgtagatgcaacattcaatcagaagtggtgagatttcacat 38050115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 242
Target Start/End: Original strand, 17614099 - 17614151
Alignment:
Q  191 tacctgcgcgttacccacg-tagaggcaacattccaccagaaggggtgagatt 242  Q
    ||||||| ||||||||||| | |||||||||||| | ||||||||||||||||    
T  17614099 tacctgcacgttacccacggtcgaggcaacattcaaacagaaggggtgagatt 17614151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 160; Significance: 3e-85; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 128170 - 127923
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgga 100  Q
    |||| ||||||||||||| |||| ||||||| ||||||||||| ||| |||||||| || |||||||||||||||||||| |||||||||||||||||||    
T  128170 aacaacgtaatggcacaacggccccaacataaacaacttattagaattcaatctaggtgattcatcaacataaaatcatagcaattacgtaacacatgga 128071  T
Q  101 aaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcg 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||  ||||||||||||| ||||||||||| |||| |||||||| ||||  |    
T  128070 aaacaagtaagatccccatcccgttacgtatcaaagcgacccttagacgacttgtgagagagtcaactcacttcaacaactatccttggttatctgcaag 127971  T
Q  201 ttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||| ||||||||| | ||||||||||||||||||||||    
T  127970 ttacccacgtagatgcaacattcaaacagaaggggtgagatttcacat 127923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 65 - 248
Target Start/End: Original strand, 397042 - 397229
Alignment:
Q  65 tcaacataaaatcatatcaattacgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacg---cgtgagaga 161  Q
    |||||||||||||||   || |||||||||||||||||||||| || |||| |||||| |||||||||||||||||||||||| ||||   |||||||||    
T  397042 tcaacataaaatcatgataaatacgtaacacatggaaaacaagcaa-atcctcatcccattacgtatcagagcgaccctaagaagacgacacgtgagaga 397140  T
Q  162 gtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagaggcaacatt--ccaccagaaggggtgagatttcacat 248  Q
    ||||  ||||||||||| ||||||||| ||||||||  |||||||||||||||||||||||  | | ||||||||||||||||||||||    
T  397141 gtcatctcacttcaacaactattcttgattacctgcaagttacccacgtagaggcaacatttccaagcagaaggggtgagatttcacat 397229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 160; Significance: 3e-85; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 13178818 - 13179065
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgga 100  Q
    |||| ||||||||||||| |||| ||||||| ||||||||||| ||| |||||||| || |||||||||||||||||||| |||||||||||||||||||    
T  13178818 aacaacgtaatggcacaacggccccaacataaacaacttattagaattcaatctaggtgattcatcaacataaaatcatagcaattacgtaacacatgga 13178917  T
Q  101 aaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcg 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||  ||||||||||||| ||||||||||| |||| |||||||| ||||  |    
T  13178918 aaacaagtaagatccccatcccgttacgtatcaaagcgacccttagacgacttgtgagagagtcaactcacttcaacaactatccttggttatctgcaag 13179017  T
Q  201 ttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||| ||||||||| | ||||||||||||||||||||||    
T  13179018 ttacccacgtagatgcaacattcaaacagaaggggtgagatttcacat 13179065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 17259731 - 17259485
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgga 100  Q
    |||| ||||||||||||| | |||||||||| ||||||||||||| |||| ||||| |||||||||||||||||||||||  ||| | ||||||||||||    
T  17259731 aacaacgtaatggcacaacgacctcaacataaacaacttattaaactccattctaggtggttcatcaacataaaatcatagaaat-atgtaacacatgga 17259633  T
Q  101 aaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcg 200  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||  || ||| |||| |     
T  17259632 aaacaagaaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaactcacttcaacatctatttctgtttatctgcact 17259533  T
Q  201 ttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||||||||||||| | ||||||||||||||||| ||||    
T  17259532 ttacccacgtagaggcaacattcaaacagaaggggtgagattttacat 17259485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 16058685 - 16058932
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgga 100  Q
    ||||| |||||||||||| ||| ||||| || ||||||||||||||| || || ||    ||| ||||||| ||||| || || ||||||||||||||||    
T  16058685 aacattgtaatggcacaacggcatcaacttaaacaacttattaaaattcactcaaggcaattcttcaacatgaaatcttaacatttacgtaacacatgga 16058784  T
Q  101 aaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcg 200  Q
    |||||||||| |||| |||||||||||||||||||| |||||||||||||| ||| ||||||| || |||||||||||||||| |||||||| |||| ||    
T  16058785 aaacaagtaaaatcctcatcccgttacgtatcagagtgaccctaagacgacacgtcagagagtgaactcacttcaacagctatccttggttatctgcacg 16058884  T
Q  201 ttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||    
T  16058885 ttacccacgtagaggcaacattcaaacagaaggggtgagatttcacat 16058932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 7 - 248
Target Start/End: Original strand, 16043832 - 16044073
Alignment:
Q  7 gtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaa 106  Q
    |||||||||||| ||| ||||| || ||||||||||||||| || |||||    ||| ||||||| ||||| || || ||||||||||||||||||||||    
T  16043832 gtaatggcacaacggcatcaacttaaacaacttattaaaattcactctaggcaattcttcaacatgaaatcttaacatttacgtaacacatggaaaacaa 16043931  T
Q  107 gtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttaccc 206  Q
    |||| |||| |||||||||||||||||||| |||||||||||||| ||| ||||||| || |||||||||||||||| |||||||| ||||  |||||||    
T  16043932 gtaaaatcctcatcccgttacgtatcagagtgaccctaagacgacacgtcagagagtgaactcacttcaacagctatccttggttatctgcatgttaccc 16044031  T
Q  207 acgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||||||| | ||||||||||||||||||||||    
T  16044032 acgtagaggcaacattcaaacagaaggggtgagatttcacat 16044073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 6 - 248
Target Start/End: Original strand, 6145419 - 6145661
Alignment:
Q  6 cgtaatggcacaatggcctcaacatagacaacttattaaaat-ccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaac 104  Q
    |||||||||| || || ||||||||| ||||||||||||||| ||| | ||| ||||||||||||||||| |||||  ||| ||||||||||||||||||    
T  6145419 cgtaatggcataacggtctcaacataaacaacttattaaaattccattataggtggttcatcaacataaa-tcataaaaat-acgtaacacatggaaaac 6145516  T
Q  105 aagt-aagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgtta 203  Q
    ||   |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| || |  |||||| |||| | |||    
T  6145517 aaaacaagatctccatcccgttacgtatcaaagcgaccctaagacgacgcgtgagagagtcaactcacttcaacagttaattatggttatctgcacttta 6145616  T
Q  204 cccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||||||||||||||||| | ||||||||||||||||||||||    
T  6145617 cccacgtagaggcaacattcaaacagaaggggtgagatttcacat 6145661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 15 - 248
Target Start/End: Original strand, 16049316 - 16049549
Alignment:
Q  15 acaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaagtaagatc 114  Q
    |||| ||| ||||| || ||||||||||||||| || |||||    ||| ||||||| ||||| || || ||| |||||||||||||||||||||| |||    
T  16049316 acaacggcatcaacttaaacaacttattaaaattcactctaggcaattcttcaacatgaaatcttaacatttatgtaacacatggaaaacaagtaaaatc 16049415  T
Q  115 cccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagag 214  Q
    | |||||||||||||||| ||| |||| ||||||||| |||||||||||||| ||||||||||| |||| |||||||| |||| ||||||| ||||||||    
T  16049416 ctcatcccgttacgtatcggagtgaccttaagacgacacgtgagagagtcaactcacttcaacatctatccttggttatctgcacgttacctacgtagag 16049515  T
Q  215 gcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||| | ||||||||||||||||||||||    
T  16049516 gcaacattcaaacagaaggggtgagatttcacat 16049549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 15025134 - 15024885
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgga 100  Q
    ||||||||  |||||||| | ||||||  || |||||||||||||||||| || | ||   || ||||||||||  ||||  || || ||||||||||||    
T  15025134 aacatcgtgttggcacaacgacctcaatttaaacaacttattaaaatccagtccaaataaatcttcaacataaatacataataaatatgtaacacatgga 15025035  T
Q  101 aaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcg 200  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||  |||||||| ||||||||  |    
T  15025034 aaacaagcaagatccccatcccgttacgtatcagagcgaccctaagacgacacgtgagagattcaactcacttcaacaagtattcttgattacctgcaag 15024935  T
Q  201 ttacccacgtagaggcaacatt--ccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||||||||||||  | | ||||| ||||||||||||||||    
T  15024934 ttacccacgtagaggcaacatttccaagcagaaagggtgagatttcacat 15024885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 50352747 - 50352501
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaat-ccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgg 99  Q
    |||| ||||||||||||| |||||||||||| ||||||| ||||||| ||| ||||| ||||||||||||| ||| |||||  ||| |||||||||||||    
T  50352747 aacaacgtaatggcacaacggcctcaacataaacaacttgttaaaattccattctaggtggttcatcaacacaaa-tcataaaaat-acgtaacacatgg 50352650  T
Q  100 aaaaca-agtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcg 198  Q
    |||||| || ||||||||||||| ||||||||||||||||| |||||||||| |   ||||||||||| |||| ||  ||||||||| |||||| ||||     
T  50352649 aaaacagagcaagatccccatcctgttacgtatcagagcgatcctaagacgatgaa-gagagagtcaactcacatctgcagctattcctggttatctgca 50352551  T
Q  199 cgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
     |||||||||||||||||||||||| | ||||||||||||||||||||||    
T  50352550 tgttacccacgtagaggcaacattcaaacagaaggggtgagatttcacat 50352501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 17206304 - 17206552
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatc-caatctagatggttcatcaacataaaatcatatcaattacgtaacacatgg 99  Q
    |||| ||||||||||||  | |||||||||| |||||||| ||||||  || ||||| | ||| ||||||||||  |||||  ||| |||||||| ||||    
T  17206304 aacaacgtaatggcacagcgacctcaacataaacaacttagtaaaattgcattctaggtagttgatcaacataat-tcataataat-acgtaacaaatgg 17206401  T
Q  100 aaaacaagt--aagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgc 197  Q
    |||||||    || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| || |||||| ||||    
T  17206402 aaaacaacacaaatatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagcgagtcaactcacttcaacagctaatcctggttatctgc 17206501  T
Q  198 gcgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
     ||||||||||||||||||||||||| |  |||||||||||||||||||||    
T  17206502 acgttacccacgtagaggcaacattcaaatagaaggggtgagatttcacat 17206552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 11 - 248
Target Start/End: Complemental strand, 8493026 - 8492788
Alignment:
Q  11 tggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaagtaa 110  Q
    ||||||||||| |||||| || ||||||||||||||| |||| ||||    || ||||||||||||||||  || |||||||||||||||||||||  ||    
T  8493026 tggcacaatggtctcaacttaaacaacttattaaaattcaatttagacaactcttcaacataaaatcataataaatacgtaacacatggaaaacaaacaa 8492927  T
Q  111 gatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggtt-acctgcgcgttacccacg 209  Q
    |||| |||||| ||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||| |||| || | ||||  |||||||| |    
T  8492926 gatctccatcctgttacgtatcagagcgaccctaagacgacacatgagagagtcaactcacttcaacagctatccttgattaatctgcatgttacccatg 8492827  T
Q  210 tagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    | |||||||||||| | ||||||| ||||| ||||||||    
T  8492826 tcgaggcaacattcaaacagaaggagtgagctttcacat 8492788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 20416606 - 20416853
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgga 100  Q
    |||||||||||||||||| | | ||||| || ||||||||||||||| || |||||     || ||| ||||||  |||| |||||||||||||||||||    
T  20416606 aacatcgtaatggcacaacgacgtcaacttaaacaacttattaaaattcagtctaggcaaatcttcagcataaac-cataacaattacgtaacacatgga 20416704  T
Q  101 aaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcg 200  Q
    |||||||||||||| |||||||||||||||||| || ||||  |||||||| |||||||||||||| |||||||||||||||| |||| ||||||||  |    
T  20416705 aaacaagtaagatcgccatcccgttacgtatcaaagtgacca-aagacgacacgtgagagagtcaactcacttcaacagctatccttgattacctgcaag 20416803  T
Q  201 ttacccacgtagaggcaacatt--ccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||||||||||||  | | ||||| ||||||||||||||||    
T  20416804 ttacccacgtagaggcaacatttccaagcagaaagggtgagatttcacat 20416853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 20 - 242
Target Start/End: Complemental strand, 45804965 - 45804744
Alignment:
Q  20 ggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaagt--aagatcccc 117  Q
    |||||||||||| ||||||||  ||| |||| |  | |||||||||||||||||  |||||  ||| |||||||| |||||||||||    || ||||||    
T  45804965 ggcctcaacataaacaacttaa-aaattccatttcaaatggttcatcaacataat-tcataataat-acgtaacaaatggaaaacaatataaatatcccc 45804869  T
Q  118 atcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagaggca 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||| || |||||| |||| |||||||||||||||||||    
T  45804868 atcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaactcacatcagcagctaatcctggttatctgcacgttacccacgtagaggca 45804769  T
Q  218 acattccaccagaaggggtgagatt 242  Q
    |||||| | ||||||||||||||||    
T  45804768 acattcaaacagaaggggtgagatt 45804744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 24 - 248
Target Start/End: Complemental strand, 54332155 - 54331930
Alignment:
Q  24 tcaacatagacaacttattaaaatc-caatctagatggttcatcaacataaaatcatatcaat-tacgtaacacatggaaaacaa-gtaa-gatccccat 119  Q
    |||||||| |||||||||||||||  || ||||| ||||||||||||||||  |||||  ||| ||||||||| ||||||||||| |||| |||||||||    
T  54332155 tcaacataaacaacttattaaaatttcattctaggtggttcatcaacataat-tcata--aatatacgtaacaaatggaaaacaatgtaaagatccccat 54332059  T
Q  120 cccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagaggcaac 219  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| |||| |||||||||| || |||||   ||| ||||||||| |||||||||||    
T  54332058 cccgttacgtatcagagcgaccctaagacgacgcgtgaaagagtcaactcacatcaacagctaatcctggttttatgcacgttacccatgtagaggcaac 54331959  T
Q  220 attccaccagaaggggtgagatttcacat 248  Q
    |||| | || |||||||  ||||||||||    
T  54331958 attcaaacataaggggtaggatttcacat 54331930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 20 - 248
Target Start/End: Original strand, 11561426 - 11561655
Alignment:
Q  20 ggcctcaacatagacaacttattaaaat-ccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaagt--aagatccc 116  Q
    ||||| |||||| ||||||||||||||| ||| ||||  ||||||||||||||||  |||||  ||| | |||||| |||||||||||    || || |     
T  11561426 ggcctgaacataaacaacttattaaaattccattctacgtggttcatcaacataat-tcataataat-atgtaacaaatggaaaacaacacaaatattct 11561523  T
Q  117 catcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagaggc 216  Q
    |||| |||||||||||||||||| ||||||| |||||||||||||||||| ||| ||||||||||| || |||||| ||||  |||||||||||||||||    
T  11561524 catctcgttacgtatcagagcgatcctaagatgacgcgtgagagagtcaactcatttcaacagctaatcatggttatctgcatgttacccacgtagaggc 11561623  T
Q  217 aacattccaccagaaggggtgagatttcacat 248  Q
    ||||||| | ||||||||||||||||||||||    
T  11561624 aacattcaaacagaaggggtgagatttcacat 11561655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 35066400 - 35066148
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgga 100  Q
    |||| ||||||| ||||||||||||||| || |  ||||||||||||||| | ||||    || |||||||||| |||||  || |||||||||||||||    
T  35066400 aacaacgtaatgacacaatggcctcaacttaaatgacttattaaaatccactatagacaaatcttcaacataaattcataataaatacgtaacacatgga 35066301  T
Q  101 aaacaagtaagat--ccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcg 198  Q
    ||||||  ||||   |||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||| ||  |||| ||||||||     
T  35066300 aaacaaacaagaatcccccatcccgttacgtatcagagcgaccctaagacgacacgtgagagagtc-actcacttcaacagataaccttgattacctgca 35066202  T
Q  199 cgttaccca--cgtagaggcaacatt--ccaccagaaggggtgagatttcacat 248  Q
     ||||||||   ||| ||||||||||  | | ||||||||||||||||||||||    
T  35066201 agttacccaattgtaaaggcaacatttccaagcagaaggggtgagatttcacat 35066148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 11 - 183
Target Start/End: Original strand, 16727669 - 16727841
Alignment:
Q  11 tggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaagtaa 110  Q
    |||||||||||||||||| || |||||||||||||||||| | |  |    || ||||||||||||||||  || |||| ||||||||||||||||| ||    
T  16727669 tggcacaatggcctcaacttaaacaacttattaaaatccagtttgaacaaatcttcaacataaaatcataataaatacggaacacatggaaaacaagcaa 16727768  T
Q  111 gatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctat 183  Q
     |||| ||| | ||||||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||||    
T  16727769 aatcctcattctgttacgtatcagagcgaccctaagacgacacgtgagagagttaactcacttcaacaactat 16727841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 35 - 248
Target Start/End: Complemental strand, 12513668 - 12513452
Alignment:
Q  35 aacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaagtaagatccccatcccgttacgtatcag 134  Q
    |||||||||||||||| ||||||    || |||||||||| ||| |  ||  |||||||||||||||||||   |||||||||||| |||||||||||||    
T  12513668 aacttattaaaatccagtctagacaaatcttcaacataaattcacaataaacacgtaacacatggaaaacagcaaagatccccatctcgttacgtatcag 12513569  T
Q  135 agcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttaccca--cgtagaggcaacatt--ccaccaga 230  Q
    ||||||||||||||||| |||||||||||| | |||||||||||||||  |||| ||||||||   |||||||   ||| ||||||||||  | | ||||    
T  12513568 agcgaccctaagacgacacgtgagagagtc-actcacttcaacagctaaccttgattacctgcaatttacccaattgtaaaggcaacatttccaagcaga 12513470  T
Q  231 aggggtgagatttcacat 248  Q
    ||||||||||||||||||    
T  12513469 aggggtgagatttcacat 12513452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 65 - 248
Target Start/End: Complemental strand, 22308409 - 22308220
Alignment:
Q  65 tcaacataaaatcatatcaattacgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacg---cgtgagaga 161  Q
    |||||||||||||||   || |||||||||||||||||||||| || ||||||| || ||||||||||||||||||||||||||||||   |||||||||    
T  22308409 tcaacataaaatcatgataaatacgtaacacatggaaaacaagcaa-atccccaccctgttacgtatcagagcgaccctaagacgacgacacgtgagaga 22308311  T
Q  162 gtcaattcacttcaacagctattcttggttacctgcgcgttaccca--cgtagaggcaacatt--ccaccagaaggggtgagatttcacat 248  Q
    ||||  ||||||||||||||||||||| || ||| |  ||||||||   ||| ||||||||||  | | ||||||||||||||||||||||    
T  22308310 gtcatctcacttcaacagctattcttgatttcctacaagttacccaattgtaaaggcaacatttccaagcagaaggggtgagatttcacat 22308220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 11 - 248
Target Start/End: Complemental strand, 53647700 - 53647456
Alignment:
Q  11 tggcacaatggcctcaacatagacaactta-ttaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaagta 109  Q
    |||||||| ||||||||| || |||||||| |||||||||||| || |     | |||||||||||||||   || || ||||||||||||||||||| |    
T  53647700 tggcacaacggcctcaacttaaacaacttaattaaaatccaatttaaacaaaacttcaacataaaatcatgataaatatgtaacacatggaaaacaagaa 53647601  T
Q  110 agatccccatcccgttacgtatcagagcgaccctaagacgacg---cgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttaccc 206  Q
    | ||| | |||||||||||||||||||||||||||||||||||   |||||||||||||  ||||||||||| ||||||||| || |||||  |||||||    
T  53647600 a-atctcaatcccgttacgtatcagagcgaccctaagacgacgacacgtgagagagtcatctcacttcaacaactattcttgatttcctgcaagttaccc 53647502  T
Q  207 a--cgtagaggcaacatt--ccaccagaaggggtgagatttcacat 248  Q
    |   ||| ||||||||||  | | ||||||||||||||||||||||    
T  53647501 aattgtaaaggcaacatttccaatcagaaggggtgagatttcacat 53647456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 19574169 - 19574417
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgga 100  Q
    |||||||||||||||||| | ||| ||| || |||||||||||||||| ||||||||    || |||||||||| | |||  ||  ||||||||||||||    
T  19574169 aacatcgtaatggcacaacgaccttaacttaaacaacttattaaaatctaatctagacaaatcttcaacataaatttataataaacacgtaacacatgga 19574268  T
Q  101 aaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcg 200  Q
    ||||||  |||||   ||||||||||||||| |||||||||| |||| ||| |||||||||||| | |||||||||||||||  |||| ||||||||  |    
T  19574269 aaacaaacaagat--acatcccgttacgtattagagcgacccgaagatgacacgtgagagagtc-actcacttcaacagctaaccttgattacctgcaag 19574365  T
Q  201 ttaccca--cgtagaggcaacatt--ccaccagaaggggtgagatttcacat 248  Q
    |||||||   ||| ||||||||||  | | |||||| |||||||||||||||    
T  19574366 ttacccaattgtaaaggcaacatttccaaacagaagaggtgagatttcacat 19574417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 65 - 248
Target Start/End: Complemental strand, 42328054 - 42327865
Alignment:
Q  65 tcaacataaaatcatatcaattacgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacg---cgtgagaga 161  Q
    ||||||||||||||||  || |||||||||||||||||||| | || |||||||| |||||||||||| |||||||||||| ||||||   ||||||| |    
T  42328054 tcaacataaaatcataataaatacgtaacacatggaaaaca-gcaaaatccccattccgttacgtatctgagcgaccctaaaacgacgacacgtgagata 42327956  T
Q  162 gtcaattcacttcaacagctattcttggttacctgcgcgttaccca--cgtagaggcaacatt--ccaccagaaggggtgagatttcacat 248  Q
    ||||| ||||||||||| ||||||||| |||| |||  ||||||||   ||| ||||||||||  | | ||||||||||||||||||||||    
T  42327955 gtcaactcacttcaacaactattcttgattacttgcaagttacccaattgtaaaggcaacatttccaagcagaaggggtgagatttcacat 42327865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 6 - 223
Target Start/End: Complemental strand, 16181075 - 16180857
Alignment:
Q  6 cgtaatggcacaatggcctcaacatagacaacttattaaaatc-caatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaac 104  Q
    ||||||||||| | |||||||||| | |||||||||||||||  || ||||  ||||||||||||||||  |||||  ||| |||||||| ||||||||     
T  16181075 cgtaatggcactacggcctcaacacaaacaacttattaaaatttcattctacgtggttcatcaacataat-tcataataat-acgtaacaaatggaaaag 16180978  T
Q  105 aagt--aagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgtt 202  Q
    ||    || |||  |||| |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||| || |||||| ||||  |||    
T  16180977 aacacaaatatcttcatctcgttacgtatcaaagcgaccctaagacgacgcgtgagagagtcaactcacttcaacaactaatcctggttatctgcaagtt 16180878  T
Q  203 acccacgtagaggcaacattc 223  Q
    || || |||||||||||||||    
T  16180877 actcatgtagaggcaacattc 16180857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 57 - 238
Target Start/End: Complemental strand, 1209514 - 1209333
Alignment:
Q  57 atggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaagt--aagatccccatcccgttacgtatcagagcgaccctaagacgacgcg 154  Q
    |||||||||||||||||  |||||  ||| |||||||| |||||||||||    || |||| || |||||||||||| |||||||||| ||||||||||     
T  1209514 atggttcatcaacataat-tcatagtaat-acgtaacaaatggaaaacaatgcaaatatcctcaacccgttacgtattagagcgacccgaagacgacgca 1209417  T
Q  155 tgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagaggcaacattccaccagaaggggtga 238  Q
    |||||||||||| |||| ||| |||||| || |||||| ||||  ||||||||| |||||||||||||| | ||||||||||||    
T  1209416 tgagagagtcaactcacatcagcagctaatcctggttatctgcatgttacccacatagaggcaacattcaaacagaaggggtga 1209333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 145 - 248
Target Start/End: Original strand, 12563824 - 12563927
Alignment:
Q  145 agacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagaggcaacattccaccagaaggggtgagatttc 244  Q
    |||| ||||||||||||||||| |||||||||||||||||| || ||| |||| ||||||||||||||||||||||||| | ||||||  ||||||||||    
T  12563824 agacaacgcgtgagagagtcaactcacttcaacagctattcctgattatctgcacgttacccacgtagaggcaacattcaaacagaagatgtgagatttc 12563923  T
Q  245 acat 248  Q
    ||||    
T  12563924 acat 12563927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 87 - 248
Target Start/End: Complemental strand, 19569994 - 19569830
Alignment:
Q  87 acgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattct 186  Q
    ||||||||||||||||||||   |||||| ||||||||||||||||||||||||||||||| |||  ||||||||||| | |||||||||||||||   |    
T  19569994 acgtaacacatggaaaacaaactagatccgcatcccgttacgtatcagagcgaccctaagatgacatgtgagagagtc-actcacttcaacagctaactt 19569896  T
Q  187 tggttacctgcgcgttaccca--cgtagaggcaacatt--ccaccagaaggggtgagatttcacat 248  Q
    || ||||||||  ||||||||   ||| ||||||||||  | | ||||||||||||||||||||||    
T  19569895 tgattacctgcaagttacccaattgtaaaggcaacatttccaagcagaaggggtgagatttcacat 19569830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 17668584 - 17668830
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatc-caatctagatggttcatcaacataaaatcatatcaat-tacgtaacacatg 98  Q
    |||| ||||||||||| | |||||||||||| |||||||||||||||  || ||||  ||||||||||||||||  |||||  ||| ||||||||| |||    
T  17668584 aacaacgtaatggcactacggcctcaacataaacaacttattaaaatttcattctatgtggttcatcaacataat-tcata--aatatacgtaacaaatg 17668680  T
Q  99 gaaaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcg 198  Q
    ||||||||| |||||||||| ||||||||||||||||||   |||||||| || ||| ||||| || | ||||  |  || ||||||||||| ||||||     
T  17668681 gaaaacaagcaagatccccaccccgttacgtatcagagc--acctaagac-acacgtaagagaatccactcacgacttcaactattcttggtcacctgca 17668777  T
Q  199 cgttacccacgtagaggcaaca---ttccaccagaaggggtgagatttcacat 248  Q
     |||||||| | | ||||||||   ||| | ||||||||||||||||||||||    
T  17668778 agttacccatgcaaaggcaacaattttcaagcagaaggggtgagatttcacat 17668830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 12860918 - 12860691
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaat-ctagatggttcatcaacataaaatcatatcaattacgtaacacatgg 99  Q
    |||| ||||||||||||| ||| |||| ||| ||||||||||||||| | || |||| ||||||||||||||||||| |||  ||| |||||||||||||    
T  12860918 aacaacgtaatggcacaacggcttcaatataaacaacttattaaaattctattctaggtggttcatcaacataaaataatagaaat-acgtaacacatgg 12860820  T
Q  100 aaaacaagtaagat-ccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcg 198  Q
    ||| |||| ||||| ||||||| ||              || ||||||||||||||      |||||| ||||||||||||||||| |||| || ||||     
T  12860819 aaa-caaggaagattccccatcgcg--------------gatcctaagacgacgcg------agtcaactcacttcaacagctatttttggctatctgca 12860741  T
Q  199 cgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||||||||||||||| | || |||||||||||||||||||    
T  12860740 cgttacccacgtagaggcaacattcaaacaaaaggggtgagatttcacat 12860691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 65 - 248
Target Start/End: Original strand, 14440332 - 14440519
Alignment:
Q  65 tcaacataaaatcatatcaattacgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacg---cgtgagaga 161  Q
    |||||||||||||||   || |||||||||||||||||||||| || |||||||||||| ||||||||||||| ||||||||||||||   |||||||||    
T  14440332 tcaacataaaatcatgataaatacgtaacacatggaaaacaagcaa-atccccatcccgatacgtatcagagcaaccctaagacgacgacacgtgagaga 14440430  T
Q  162 gtcaattcacttcaacagctattcttggttacctgcgcgttaccc--acgtagaggcaacatt--ccaccagaaggggtgagatttcacat 248  Q
    ||||  ||||||| |||||||  |||| |||| |||  |||||||  ||| ||| ||||||||  | | ||||||||||||||||||||||    
T  14440431 gtcatctcacttc-acagctaaacttgattacatgcaagttacccatacgaaga-gcaacatttccaagcagaaggggtgagatttcacat 14440519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 135 - 248
Target Start/End: Original strand, 11190968 - 11191081
Alignment:
Q  135 agcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagaggcaacattccaccagaaggg 234  Q
    |||| ||||||||||||||||||||||||||| |||| |||||||||| |  |||||| || | ||||||||||||||||| ||||||| | |||| | |    
T  11190968 agcggccctaagacgacgcgtgagagagtcaactcacatcaacagctaattctggttatctacacgttacccacgtagaggaaacattcaaacagatgag 11191067  T
Q  235 gtgagatttcacat 248  Q
    ||||||||||||||    
T  11191068 gtgagatttcacat 11191081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 178
Target Start/End: Original strand, 9643728 - 9643895
Alignment:
Q  11 tggcacaatggcctcaacatagacaacttatt-aaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaagta 109  Q
    |||||||| ||||||||| || |||||| ||| |||||||| ||||||    || |||||||||  |||||  || |||| ||||||| ||||||||  |    
T  9643728 tggcacaacggcctcaacttaaacaactcatttaaaatccagtctagacaaatcttcaacataagttcataataaatacgcaacacatagaaaacaatca 9643827  T
Q  110 agatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaaca 178  Q
    |||||||| ||||||||||||| ||||||||||||||||| | ||||||||| || | |||||||||||    
T  9643828 agatccccttcccgttacgtattagagcgaccctaagacggcacgtgagagaatc-actcacttcaaca 9643895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 91 - 248
Target Start/End: Complemental strand, 12507583 - 12507423
Alignment:
Q  91 aacacatggaaaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggt 190  Q
    ||||||||||||| |   ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| | || ||||| || |||  |||| |    
T  12507583 aacacatggaaaatagcaaagatccccatcccgttacgtatcagagcgaacctaagacgacacgtgagagagtc-actcccttcaccaactaaccttgat 12507485  T
Q  191 tacctgcgcgttaccca--cgtagaggcaacatt--ccaccagaaggggtgagatttcacat 248  Q
    |||||||  ||||||||   ||| ||||||| ||  | | ||||||||||||||||||||||    
T  12507484 tacctgcaagttacccaattgtaaaggcaacttttccaagcagaaggggtgagatttcacat 12507423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 115 - 248
Target Start/End: Original strand, 14523711 - 14523842
Alignment:
Q  115 cccatcccgttacgtatcagagcgac-cctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtaga 213  Q
    |||||||||||||||||||||||||| ||||||||||| |  |   || ||||  ||| ||| | | || || |||||| |||| |||||||||||||||    
T  14523711 cccatcccgttacgtatcagagcgactcctaagacgacacaag---gaatcaacacacatcagcggttactcctggttatctgcacgttacccacgtaga 14523807  T
Q  214 ggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||||||| | ||||||||||||||||||||||    
T  14523808 ggcaacattcaaacagaaggggtgagatttcacat 14523842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 112 - 248
Target Start/End: Original strand, 48629966 - 48630100
Alignment:
Q  112 atccccatcccgttacgtatcagagcgac-cctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgt 210  Q
    |||| ||||| |||||||||||||||||| ||||| ||||| || |   || |||| |||| ||| | | || || |||||| |||| ||||||||||||    
T  48629966 atccacatccagttacgtatcagagcgactcctaatacgacacgag---gaatcaactcacatcagcggttactcctggttatctgcacgttacccacgt 48630062  T
Q  211 agaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||| | ||||||||||||||||||||||    
T  48630063 agaggcaacattcaaacagaaggggtgagatttcacat 48630100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 117 - 248
Target Start/End: Complemental strand, 12919080 - 12918951
Alignment:
Q  117 catcccgttacgtatcagagcgac-cctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagagg 215  Q
    ||||||||||||||| |||||||| ||||||||||| || |   || |||| |||| ||| | | || || |||||| |||| |||||||||||||||||    
T  12919080 catcccgttacgtattagagcgactcctaagacgacacgag---gaatcaactcacatcagcggttactcctggttatctgcacgttacccacgtagagg 12918984  T
Q  216 caacattccaccagaaggggtgagatttcacat 248  Q
    |||||||| | |||||||||||| |||||||||    
T  12918983 caacattcaaacagaaggggtgaaatttcacat 12918951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 113 - 248
Target Start/End: Original strand, 29930914 - 29931047
Alignment:
Q  113 tccccatcccgttacgtatcagagcgac-cctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgta 211  Q
    |||||||||||||||||||||||| ||| ||||||||||| || |   || |||| |||| ||| | | || || ||||||  ||| ||||| |||||||    
T  29930914 tccccatcccgttacgtatcagagtgactcctaagacgacacgag---gaatcaactcacctcagcggttactcctggttatttgcacgttatccacgta 29931010  T
Q  212 gaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||||||||| | ||||||||||||||||||||||    
T  29931011 gaggcaacattcaaacagaaggggtgagatttcacat 29931047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 113 - 248
Target Start/End: Original strand, 29980068 - 29980201
Alignment:
Q  113 tccccatcccgttacgtatcagagcgac-cctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgta 211  Q
    |||||||||||||||||||||||| ||| ||||||||||| || |   || |||| |||| ||| | | || || ||||||  ||| ||||| |||||||    
T  29980068 tccccatcccgttacgtatcagagtgactcctaagacgacacgag---gaatcaactcacctcagcggttactcctggttatttgcacgttatccacgta 29980164  T
Q  212 gaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||||||||| | ||||||||||||||||||||||    
T  29980165 gaggcaacattcaaacagaaggggtgagatttcacat 29980201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 187 - 248
Target Start/End: Complemental strand, 3161985 - 3161924
Alignment:
Q  187 tggttacctgcgcgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||| |||| ||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  3161985 tggttatctgcacgttacccacgtagaggcaacattcaaacagaaggggtgagatttcacat 3161924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 118 - 248
Target Start/End: Original strand, 12539806 - 12539934
Alignment:
Q  118 atcccgttacgtatcagagcgac-cctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagaggc 216  Q
    ||||||||||||||||||||||| ||||||||||| || |   || | || |||| ||| |||||| || |||||| |||| ||||||||||||||||||    
T  12539806 atcccgttacgtatcagagcgactcctaagacgacacgag---gaataaactcacatcagcagctaatcctggttatctgcacgttacccacgtagaggc 12539902  T
Q  217 aacattccaccagaaggggtgagatttcacat 248  Q
    ||||||| | |||||| | ||| |||||||||    
T  12539903 aacattcaaacagaagagatgaaatttcacat 12539934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 115 - 248
Target Start/End: Complemental strand, 14251425 - 14251285
Alignment:
Q  115 cccatcccgttacgtatcagagcgaccctaagacgacgc---gtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttaccca--cg 209  Q
    ||||| ||||||||||| |||||||| |||||||||||    ||||||||||||| ||||| ||||| ||||| ||| ||||||||  ||||||||   |    
T  14251425 cccattccgttacgtattagagcgactctaagacgacgacatgtgagagagtcaactcactccaacaactatttttgattacctgcaagttacccaattg 14251326  T
Q  210 tagaggcaacatt--ccaccagaaggggtgagatttcacat 248  Q
    || ||||||||||  | | ||||||||||||||||||||||    
T  14251325 taaaggcaacatttccaagcagaaggggtgagatttcacat 14251285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 115 - 248
Target Start/End: Original strand, 25200601 - 25200731
Alignment:
Q  115 cccatcccgttacgtatcagagcgac-cctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtaga 213  Q
    |||||||||||||||||||||||||| ||||||||||| || |   || |||| |||| ||| | | || ||||||||| |||| |||||||||||||||    
T  25200601 cccatcccgttacgtatcagagcgactcctaagacgacacgag---gaatcaactcacatcagcggttactcttggttatctgcacgttacccacgtaga 25200697  T
Q  214 ggcaacattccaccagaaggggtgagatttcacat 248  Q
     ||||||||| | ||||| || |||||||||||||    
T  25200698 tgcaacattcaaacagaa-ggatgagatttcacat 25200731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 87 - 158
Target Start/End: Complemental strand, 3265822 - 3265752
Alignment:
Q  87 acgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgag 158  Q
    |||||||| |||||||||||  |||||| |||||||||||||||||||||||||||| ||||||| ||||||    
T  3265822 acgtaacatatggaaaacaataaagatctccatcccgttacgtatcagagcgaccct-agacgacacgtgag 3265752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 52 - 150
Target Start/End: Original strand, 12559450 - 12559547
Alignment:
Q  52 tctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaa-gtaagatccccatcccgttacgtatcagagcgaccctaagacga 150  Q
    ||||| ||||||||||||||||| |||||  ||| | |||| ||||||||||||| | |||||| |||||| ||||||||||||||||||||||||||||    
T  12559450 tctaggtggttcatcaacataaa-tcataaaaat-atgtaatacatggaaaacaaagcaagatcaccatcctgttacgtatcagagcgaccctaagacga 12559547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 117 - 197
Target Start/End: Complemental strand, 41174273 - 41174191
Alignment:
Q  117 catcccgttacgtatcagagcgaccctaagacgacg---cgtgagagagtcaattcacttcaacagctattcttggttacctgc 197  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||||| | ||||||| | ||||| ||||| ||||||||    
T  41174273 catcccgttacgtatcagagcgaccctaagacgacgacacgtgagagagtcgactcacttc-atagctaatcttgattacctgc 41174191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 117 - 197
Target Start/End: Complemental strand, 50349740 - 50349658
Alignment:
Q  117 catcccgttacgtatcagagcgaccctaagacgacg---cgtgagagagtcaattcacttcaacagctattcttggttacctgc 197  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||||| | ||||||| ||||||| ||||  ||||||||    
T  50349740 catcccgttacgtatcagagcgaccctaagacgacgacacgtgagagagtcgactcacttc-acagctaatcttaattacctgc 50349658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 87 - 142
Target Start/End: Original strand, 36527054 - 36527109
Alignment:
Q  87 acgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagcgaccc 142  Q
    |||||||| |||||||| ||  ||||||||||||||||||||||||||||||||||    
T  36527054 acgtaacatatggaaaataataaagatccccatcccgttacgtatcagagcgaccc 36527109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 207
Target Start/End: Complemental strand, 42355448 - 42355356
Alignment:
Q  117 catcccgttacgtatcagagcgaccctaagacg---acgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttaccca 207  Q
    |||||||||||||||||||||||||||||||||   || |||||||||||| | ||||||| | ||||| ||||| ||||||||  ||||||||    
T  42355448 catcccgttacgtatcagagcgaccctaagacgacaacacgtgagagagtcgactcacttc-atagctaatcttgattacctgcaagttaccca 42355356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 16326320 - 16326270
Alignment:
Q  87 acgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagc 137  Q
    |||||||| |||||||||||  |||||||||||||||||||||||||||||    
T  16326320 acgtaacatatggaaaacaataaagatccccatcccgttacgtatcagagc 16326270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 248
Target Start/End: Complemental strand, 50756955 - 50756894
Alignment:
Q  187 tggttacctgcgcgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||| ||||  |||||||||||||||||||||||| | ||||| ||||||||||||||||    
T  50756955 tggttatctgcatgttacccacgtagaggcaacattcaaacagaatgggtgagatttcacat 50756894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 207
Target Start/End: Original strand, 10561978 - 10562068
Alignment:
Q  116 ccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttaccca 207  Q
    |||||| |||||||||||||||||||||||||| ||  |||||||| || | | ||||||||| ||| ||||| ||||||||  ||||||||    
T  10561978 ccatcctgttacgtatcagagcgaccctaagac-acatgtgagagaatcgactaacttcaacaactaatcttgattacctgcaagttaccca 10562068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 207
Target Start/End: Complemental strand, 45533352 - 45533260
Alignment:
Q  117 catcccgttacgtatcagagcgaccctaagac---gacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttaccca 207  Q
    ||||||||||||||||| ||||||||||||||   ||| |||||||||||| | ||||||| ||| ||| ||||| ||||||||  ||||||||    
T  45533352 catcccgttacgtatcaaagcgaccctaagacgatgacacgtgagagagtcgactcacttc-acaactaatcttgattacctgcaagttaccca 45533260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 248
Target Start/End: Complemental strand, 19165361 - 19165307
Alignment:
Q  194 ctgcgcgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||| |||||||||| |||||||||||||  | ||||||||||||||||||||||    
T  19165361 ctgcacgttacccacttagaggcaacatttaaacagaaggggtgagatttcacat 19165307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 248
Target Start/End: Complemental strand, 3528833 - 3528772
Alignment:
Q  187 tggttacctgcgcgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||| ||||  ||||| ||||||||||||| |||| | ||||||||||||||||||||||    
T  3528833 tggttatctgcatgttacgcacgtagaggcaatattcaaacagaaggggtgagatttcacat 3528772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 11189695 - 11189760
Alignment:
Q  9 aatggcacaatggcctcaacatagacaacttattaaaa-tccaatctagatggttcatcaacataa 73  Q
    |||||||| | ||||| |||||| |||||||||||||| |||| ||||| ||||||||||||||||    
T  11189695 aatggcactacggccttaacataaacaacttattaaaattccattctaggtggttcatcaacataa 11189760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 19573185 - 19573129
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctaga 57  Q
    |||||||||||||||||| ||||| ||| || ||||||||||||||| || ||||||    
T  19573185 aacatcgtaatggcacaacggccttaacttaaacaacttattaaaattcagtctaga 19573129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 121 - 175
Target Start/End: Original strand, 44268777 - 44268834
Alignment:
Q  121 ccgttacgtatcagagcgaccctaagacgacg---cgtgagagagtcaattcacttca 175  Q
    |||||||||||||||| |||||||||||||||   |||||||||||| | ||||||||    
T  44268777 ccgttacgtatcagagagaccctaagacgacgacacgtgagagagtcgactcacttca 44268834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 1990270 - 1990220
Alignment:
Q  87 acgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagc 137  Q
    |||||||| ||||||||||   || ||||||||||||||||||||||||||    
T  1990270 acgtaacatatggaaaacagtaaaaatccccatcccgttacgtatcagagc 1990220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 247
Target Start/End: Original strand, 6001897 - 6001950
Alignment:
Q  194 ctgcgcgttacccacgtagaggcaacattccaccagaaggggtgagatttcaca 247  Q
    |||| |||||||||  |||||| ||||||| | |||||||||||||||||||||    
T  6001897 ctgcacgttacccatatagaggtaacattcaaacagaaggggtgagatttcaca 6001950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 17684222 - 17684251
Alignment:
Q  112 atccccatcccgttacgtatcagagcgacc 141  Q
    ||||||||||||||||||||||||||||||    
T  17684222 atccccatcccgttacgtatcagagcgacc 17684251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 22643977 - 22643948
Alignment:
Q  112 atccccatcccgttacgtatcagagcgacc 141  Q
    ||||||||||||||||||||||||||||||    
T  22643977 atccccatcccgttacgtatcagagcgacc 22643948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 164
Target Start/End: Complemental strand, 14154359 - 14154309
Alignment:
Q  117 catcccgttacgtatcagagcgaccctaag---acgacgcgtgagagagtc 164  Q
    |||||||||| |||||||||||||||||||   ||||| ||||||||||||    
T  14154359 catcccgttatgtatcagagcgaccctaagacaacgacacgtgagagagtc 14154309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 156; Significance: 6e-83; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 31049 - 31265
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgga 100  Q
    |||||||||||||||||| |||||||||||| ||||||||||||| |||||||  |||| |||||||||||||||||||| |||||||||||||||||||    
T  31049 aacatcgtaatggcacaacggcctcaacataaacaacttattaaagtccaatc--gatgattcatcaacataaaatcatagcaattacgtaacacatgga 31146  T
Q  101 aaacaagtaa-gatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgc 199  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| || |||||| |||| |    
T  31147 aaacaagtaaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaactcacttcaatagctaatcctggttatctgcac 31246  T
Q  200 gttacccacgtagaggcaa 218  Q
    |||||||||||||||||||    
T  31247 gttacccacgtagaggcaa 31265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1212 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: scaffold1212
Description:

Target: scaffold1212; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 6 - 248
Target Start/End: Complemental strand, 505 - 264
Alignment:
Q  6 cgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaaca 105  Q
    ||||||||||||| ||||||||||||||||| ||||||| || ||||||||||||||||||||||||||||||||  ||||  |||||||||||||||||    
T  505 cgtaatggcacaacggcctcaacatagacaaattattaagattcaatctagatggttcatcaacataaaatcatagaaattt-gtaacacatggaaaaca 407  T
Q  106 agtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacc 205  Q
    ||||||||| |||| | ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| |||||| || | | |||||    
T  406 agtaagatctccatgctgttacgtatcagagcgaccctaagacgtcgcgtgagagagtcaactcacttcaacagctattcctggttatctacacattacc 307  T
Q  206 cacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||||||||||||||  | ||||||||||||||||||||||    
T  306 cacgtagaggcaacatttaaacagaaggggtgagatttcacat 264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 154; Significance: 1e-81; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 7 - 248
Target Start/End: Original strand, 27302 - 27542
Alignment:
Q  7 gtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaa 106  Q
    |||||||||||| | |||||||||| ||||||||||| ||| |||||||  || |||||||||||||||||||| |||||||||||||||||||||||||    
T  27302 gtaatggcacaacgacctcaacataaacaacttattagaattcaatctaagtgattcatcaacataaaatcatagcaattacgtaacacatggaaaacaa 27401  T
Q  107 gtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttaccc 206  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||| |||| |||||||||||||||||| || ||| || | ||||||||    
T  27402 gtaagattcccatcccgttacgtatcagagcgaccctaagacgacgcatga-agaatcaactcacttcaacagctattcctgattatcttcacgttaccc 27500  T
Q  207 acgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||||||| | ||||||||||||||||||||||    
T  27501 acgtagaggcaacattcaaacagaaggggtgagatttcacat 27542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 153; Significance: 4e-81; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 14 - 246
Target Start/End: Original strand, 72589 - 72820
Alignment:
Q  14 cacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaagtaagat 113  Q
    ||||| ||||||| |||| ||||||||||||||| |||||||| |||||||||||||||||||||||  ||  |||||||||||||||||||||||||||    
T  72589 cacaacggcctcatcataaacaacttattaaaattcaatctaggtggttcatcaacataaaatcatagaaac-acgtaacacatggaaaacaagtaagat 72687  T
Q  114 ccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtaga 213  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| ||||||| ||||| |||||| |||| |||||||||| ||||    
T  72688 ccccatcccgttacgtattagagcgaccctaagacgacgcgtgagagagtcaactcacctcaacagttattcctggttatctgcacgttacccacataga 72787  T
Q  214 ggcaacattccaccagaaggggtgagatttcac 246  Q
    |||||||||| | ||||||||||||||||||||    
T  72788 ggcaacattcaaacagaaggggtgagatttcac 72820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 20 - 247
Target Start/End: Original strand, 61029 - 61258
Alignment:
Q  20 ggcctcaacatagacaacttattaaaat-ccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaagt--aagatccc 116  Q
    |||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||  |||||   | ||||||||| |||||||||||    || ||| |    
T  61029 ggcctcaacataaacaacttattaaaattccattctagatggttcatcaacataat-tcataaataatacgtaacaaatggaaaacaacacaaatatctc 61127  T
Q  117 catcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagaggc 216  Q
    ||||||||||||||||| | ||||||||||| |||| |||||||| | || ||||||||||||||| || |||||| |||| ||||||||||||||||||    
T  61128 catcccgttacgtatcaaaacgaccctaagatgacgtgtgagagatttaactcacttcaacagctaatcctggttatctgcacgttacccacgtagaggc 61227  T
Q  217 aacattccaccagaaggggtgagatttcaca 247  Q
    ||||||| | |||||||||||| ||||||||    
T  61228 aacattcaaacagaaggggtgaaatttcaca 61258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 152; Significance: 2e-80; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 114199 - 113952
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgga 100  Q
    |||| ||||||||||||||| |||||||||| |||||||| |||||| |||||||| || |||||||||||||| ||||| |||||||||||||||||||    
T  114199 aacaacgtaatggcacaatgacctcaacataaacaacttaataaaattcaatctaggtgattcatcaacataaattcatagcaattacgtaacacatgga 114100  T
Q  101 aaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcg 200  Q
    |||||||||| ||||  |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||  ||| ||| |||| ||    
T  114099 aaacaagtaacatccagatcccgttacgtatcagagcgaccctaagacgacgcatgagagagtcaactcacttcaacagctatcattgattatctgcacg 114000  T
Q  201 ttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||||| || ||||||||||| | ||||||||||||||||| ||||    
T  113999 ttacccacatataggcaacattcaaacagaaggggtgagattttacat 113952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 148; Significance: 4e-78; HSPs: 5)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 108697 - 108944
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgga 100  Q
    |||||||||||||||||| | |||||||||| | ||||||||||||||||||| |  ||  || |||||||||| ||||| |||||| ||||||||||||    
T  108697 aacatcgtaatggcacaacgacctcaacataaataacttattaaaatccaatccaagtgaatcttcaacataaattcatagcaattatgtaacacatgga 108796  T
Q  101 aaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcg 200  Q
    ||||||||||||||| ||||| |||||||||||||| || |||||||||||||||||||||||||| ||||||||||| |||| |||||||| ||||  |    
T  108797 aaacaagtaagatcctcatcctgttacgtatcagagggatcctaagacgacgcgtgagagagtcaactcacttcaacaactatccttggttatctgcatg 108896  T
Q  201 ttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||    
T  108897 ttacccacgtagaggcaacattcaaacagaaggggtgagatttcacat 108944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 187 - 248
Target Start/End: Original strand, 64667 - 64728
Alignment:
Q  187 tggttacctgcgcgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||| |||| ||||| ||||||||||||||||||| | ||||||||||||||||||||||    
T  64667 tggttatctgcacgttaaccacgtagaggcaacattcaaacagaaggggtgagatttcacat 64728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 248
Target Start/End: Original strand, 74044 - 74178
Alignment:
Q  112 atccccatcccgttacgtatcagagcgac-cctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgt 210  Q
    ||||||| ||||||||||||||||||||| ||||||| ||| |  |   || |||| |||| ||| | | || ||||||||| |||| |||||||||| |    
T  74044 atccccaccccgttacgtatcagagcgactcctaagatgacacaag---gaatcaactcacatcagcggttactcttggttatctgcacgttacccacct 74140  T
Q  211 agaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||| | |||||| | ||| |||||||||    
T  74141 agaggcaacattcaaacagaagtgatgacatttcacat 74178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 199 - 248
Target Start/End: Complemental strand, 72225 - 72176
Alignment:
Q  199 cgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||||||||||||||| | || || ||||||||||||||||    
T  72225 cgttacccacgtagaggcaacattcaaacaaaaagggtgagatttcacat 72176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 330341 - 330284
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagat 58  Q
    ||||||||  |||||||||||||||||  || |||||||||||||||||| |||||||    
T  330341 aacatcgtgttggcacaatggcctcaatttaaacaacttattaaaatccagtctagat 330284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 142; Significance: 1e-74; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 24882 - 25129
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaat-ccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgg 99  Q
    |||| |||||||||||||  ||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||| |||||  ||| |||||||||||||    
T  24882 aacaacgtaatggcacaacagcctcaacataaacaacttattaaaattccattctagatggttcatcaacataaa-tcataaaaat-acgtaacacatgg 24979  T
Q  100 aaaacaa-gtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcg 198  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||| || | |||| ||||     
T  24980 aaaacaaagcaagatccccatcccgttacgtatcagagcgaccctaagatgacgcgtgagagagtcaactcacttcaacaactaatcctagttatctgca 25079  T
Q  199 cgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||| ||||||||||||||||||||| | ||||||||||||||||||||||    
T  25080 cgtcacccacgtagaggcaacattcaaacagaaggggtgagatttcacat 25129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 187 - 248
Target Start/End: Original strand, 22404 - 22465
Alignment:
Q  187 tggttacctgcgcgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||| |||| ||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  22404 tggttatctgcacgttacccacgtagaggcaacattcaaacagaaggggtgagatttcacat 22465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 140; Significance: 2e-73; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 6 - 248
Target Start/End: Complemental strand, 26923285 - 26923043
Alignment:
Q  6 cgtaatggcacaatggcctcaacatagacaacttattaaaat-ccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaac 104  Q
    ||||||||||||| |||||||||||| ||||||||||||||| ||| ||||| |||||||||||||||||||||||  ||| ||||||||||||||||||    
T  26923285 cgtaatggcacaacggcctcaacataaacaacttattaaaattccattctaggtggttcatcaacataaaatcatagaaat-acgtaacacatggaaaac 26923187  T
Q  105 aagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttac 204  Q
    ||| ||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||  ||||| |||| |  |||    
T  26923186 aagcaagatcttcatctcgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaactcacttcaacaactattcccggttatctgcacaatac 26923087  T
Q  205 ccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||||||||| | ||||| | ||||||||||||||    
T  26923086 ccacgtagaggcaacattcaaacagaatgagtgagatttcacat 26923043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 44025297 - 44025050
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaat-ccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgg 99  Q
    |||| ||||||||||||| | |||||||||| ||||||||||||||| ||| ||||| ||||||||||||||||| |||||  ||| |||||||| |||     
T  44025297 aacaacgtaatggcacaacgacctcaacataaacaacttattaaaattccattctaggtggttcatcaacataaa-tcataaaaat-acgtaacaaatga 44025200  T
Q  100 aaaacaagt--aagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgc 197  Q
    |||||||    || |||||||||||||||||||||||||| || |||||| |||||||||||||||||| ||||||| ||||||| || ||||||  |||    
T  44025199 aaaacaatacaaatatccccatcccgttacgtatcagagcaactctaagatgacgcgtgagagagtcaactcacttcgacagctaatcctggtta-ttgc 44025101  T
Q  198 gcgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
     ||||| |||||||||| ||| |||| | ||||||||||||||||||||||    
T  44025100 acgttatccacgtagagacaatattcaaacagaaggggtgagatttcacat 44025050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 16027834 - 16027674
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgga 100  Q
    ||||| |||||||||||| ||||||||| || |||||||||||||||||| |||||     || |||||||||||||| | ||| |||||||||||||||    
T  16027834 aacattgtaatggcacaacggcctcaacttaaacaacttattaaaatccagtctaggcaaatcttcaacataaaatcaaaacaaatacgtaacacatgga 16027735  T
Q  101 aaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagaga 161  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  16027734 aaacaagtaagatccccatcccgttacgtatcagagcaaccctaagacgacacgtgagaga 16027674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 46226153 - 46225904
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaat-ccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgg 99  Q
    |||| |||||| |||||| |||||||||||| ||||||||||||||| ||| | ||  | ||||||||||||||  |||||  ||| |||||||| ||||    
T  46226153 aacaacgtaattgcacaacggcctcaacataaacaacttattaaaattccattatatgtagttcatcaacataat-tcataataat-acgtaacaaatgg 46226056  T
Q  100 aaaacaagtaagat---ccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctg 196  Q
    |||||||   | ||   |||||||  |||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||| ||||||||| |||    
T  46226055 aaaacaacacaaatatcccccatcttgttacgtatcagagcgaccctaagacgatgcgtgacagagtcaactcacttcaacagctaatcttggttatctg 46225956  T
Q  197 cgcgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    | | ||||||||||||| ||||||||| | ||||| ||||||||||||||||    
T  46225955 cacattacccacgtagatgcaacattcaaacagaaagggtgagatttcacat 46225904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 21061013 - 21061259
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgga 100  Q
    ||||||| ||||||||||   ||||||| || |||||||||||||||||| ||| |     || ||||||||||  |||| |||||||||||||||||||    
T  21061013 aacatcggaatggcacaacaacctcaacttaaacaacttattaaaatccagtcttggcaaatcttcaacataaac-cataacaattacgtaacacatgga 21061111  T
Q  101 aaacaagtaa-gatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggtt-acctgcg 198  Q
    |||||||||| ||| | || |||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||| |||| || | ||||     
T  21061112 aaacaagtaaagattctcaccccgttacgtatcagagcgaccctaagacgacacgtgagagagtc-actcacttcaacagctatccttgattaatctgca 21061210  T
Q  199 cgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||| |||||||||  | ||||||| | ||||||||||||||||||||||    
T  21061211 cgtt-cccacgtagtaggaacattcaaacagaaggggtgagatttcacat 21061259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 11 - 248
Target Start/End: Complemental strand, 32467800 - 32467561
Alignment:
Q  11 tggcacaatggcctcaacatagacaactta-ttaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaagta 109  Q
    |||||||| ||||||||| || |||||||| |||||||||| | || ||   || ||||||||||||| |   || ||||||||||||||||||||| ||    
T  32467800 tggcacaacggcctcaacttaaacaacttaattaaaatccagtttaaataaatcttcaacataaaatcgtgataaatacgtaacacatggaaaacaaata 32467701  T
Q  110 agatccccatcccgttacgtatcagagcgaccctaagacgacg---cgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttaccc 206  Q
        ||||||||||||| |||||||||||||||||||||||||   |||||||||||||  ||||||||||| ||| ||||| ||||||||  |||||||    
T  32467700 ----ccccatcccgttatgtatcagagcgaccctaagacgacgacacgtgagagagtcatctcacttcaacaactaatcttgattacctgcaagttaccc 32467605  T
Q  207 acgtagaggcaacatt--ccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||||||  | | ||||||||||||||||||||||    
T  32467604 acgtagaggcaacatttccaagcagaaggggtgagatttcacat 32467561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 20 - 243
Target Start/End: Original strand, 35658954 - 35659176
Alignment:
Q  20 ggcctcaacatagacaacttattaaaat-ccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaagtaagatccc-c 117  Q
    |||||||||||| ||||||||||||||| ||| | ||| | ||||||||||||||  |||||  ||| |||||||| |||||||||||   | ||  | |    
T  35658954 ggcctcaacataaacaacttattaaaattccattttaggtagttcatcaacataat-tcataataat-acgtaacaaatggaaaacaacacaaatatcac 35659051  T
Q  118 atcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagaggca 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||  ||||| |||| || ||||||||||||||||    
T  35659052 atcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaactcacttcaactgctaatcccggttatctgcacg-tacccacgtagaggca 35659150  T
Q  218 acattccaccagaaggggtgagattt 243  Q
    |||||| | |||||||||||||||||    
T  35659151 acattcaaacagaaggggtgagattt 35659176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 65 - 248
Target Start/End: Complemental strand, 10358162 - 10357973
Alignment:
Q  65 tcaacataaaatcatatcaattacgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacg---cgtgagaga 161  Q
    |||||||||||||||   || |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||   |||||||||    
T  10358162 tcaacataaaatcatgataaatacgtaacacatggaaaacaagcaa-atccccatcccgttacgtatcagagcgaccctaagacgacgacacgtgagaga 10358064  T
Q  162 gtcaattcacttcaacagctattcttggttacctgcgcgttaccca--cgtagaggcaacatt--ccaccagaaggggtgagatttcacat 248  Q
    ||||  ||||||||||||||||||||| || |||||  ||||||||   ||| ||||||||||  | | ||||||||||||||||||||||    
T  10358063 gtcatctcacttcaacagctattcttgatttcctgcaagttacccaattgtaaaggcaacatttccaagcagaaggggtgagatttcacat 10357973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 9 - 248
Target Start/End: Original strand, 46739453 - 46739692
Alignment:
Q  9 aatggcacaatggcctcaacatagacaacttattaaaatc-caatctagatggttcatcaacataaaatcatatcaat-tacgtaacacatggaaaacaa 106  Q
    |||||||||| |||||||||||| |||||||||||||||  || ||||| | ||||||||||||||  |||||  ||| ||||||||| |||||||||||    
T  46739453 aatggcacaacggcctcaacataaacaacttattaaaatttcattctaggtagttcatcaacataat-tcata--aatatacgtaacaaatggaaaacaa 46739549  T
Q  107 gt--aagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttac 204  Q
        ||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||| |||| ||||| |||| |  |||||| |||| ||||||    
T  46739550 tgcaaagatcctcatcccgttacgtatcagagctacc-taagacgacgcgtgagagagtcaactcacatcaacggctaattctggttatctgcacgttac 46739648  T
Q  205 ccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||| ||||||||| | || || ||| ||||||||||||    
T  46739649 ccacgtagaagcaacattcaaacaaaaagggagagatttcacat 46739692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 112 - 248
Target Start/End: Original strand, 14628779 - 14628915
Alignment:
Q  112 atccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgta 211  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||| |||||||| || || |||||| |||| |||||||||| ||    
T  14628779 atccccatcccgttacctatcagagcgatcctaagacgacgcgtgagagagtcaactcatttcaacagttaatcctggttatctgcacgttacccacata 14628878  T
Q  212 gaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||||||||| | |||||||||||| |||||||||    
T  14628879 gaggcaacattcaaacagaaggggtgatatttcacat 14628915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 112 - 248
Target Start/End: Original strand, 55581810 - 55581946
Alignment:
Q  112 atccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgta 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||| |  |||||| ||||  ||||||||||||    
T  55581810 atccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaactcacatcagcagctaattctggttatctgcatgttacccacgta 55581909  T
Q  212 gaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||||||||| | ||||| |||||| |||||||||    
T  55581910 gaggcaacattcaaacagaatgggtgaaatttcacat 55581946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 117 - 248
Target Start/End: Original strand, 20123 - 20256
Alignment:
Q  117 catcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagaggc 216  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||| ||||||||  |||||||||||||||||    
T  20123 catcccgttacgtataagagcgaccctaagacgacacgtgagagagtcaaatcacttcaacatctattcttgattacctgcaagttacccacgtagaggc 20222  T
Q  217 aacatt--ccaccagaaggggtgagatttcacat 248  Q
    | ||||  | | ||||||||||||||||||||||    
T  20223 agcatttccaaacagaaggggtgagatttcacat 20256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 244
Target Start/End: Original strand, 14184173 - 14184405
Alignment:
Q  11 tggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaa-tcatatcaattacgtaacacatggaaaacaagta 109  Q
    |||||||| ||| ||||| || ||||||||||||||||||| ||| || |||| ||||||||||| ||||| ||| ||||||||| ||||||||||||||    
T  14184173 tggcacaacggcttcaactta-acaacttattaaaatccaaactaaatagttcttcaacataaaaatcatagcaagtacgtaacatatggaaaacaagta 14184271  T
Q  110 agatccccatcccgttacgtatcagagcgac-cctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccac 208  Q
    ||||||||||||||||||||||||||||||| |||| |||||| |  ||   | |||| |||||||| | | || || || ||| |||| ||||||||||    
T  14184272 agatccccatcccgttacgtatcagagcgactcctacgacgacacaaga---aatcaactcacttcagcggttactcctgattatctgcacgttacccac 14184368  T
Q  209 -gtagaggcaacattccaccagaaggggtgagatttc 244  Q
     || |||||||||||| | ||||||||||||||||||    
T  14184369 agtcgaggcaacattcaaacagaaggggtgagatttc 14184405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 15607775 - 15608027
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaactta-ttaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgg 99  Q
    ||||||||  ||||||||  |||||||| || |||||||| |||||||||| | || |    || |||||||||||||||   || ||||||||||||||    
T  15607775 aacatcgtgttggcacaaccgcctcaacttaaacaacttaattaaaatccagtttaaacaaatcttcaacataaaatcatgataaatacgtaacacatgg 15607874  T
Q  100 aaaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacg---cgtgagagagtcaattcacttcaacagctattcttggttacctg 196  Q
    |||||||  || |||||||||||||||||||||||||| |||||||||||| |   |||||||||||||  ||||||||||| ||| |||||||||| ||    
T  15607875 aaaacaacaaa-atccccatcccgttacgtatcagagcaaccctaagacgatgatacgtgagagagtcatctcacttcaacaactaatcttggttacttg 15607973  T
Q  197 cgcgttacccacgtagaggcaaca--ttccaccagaaggggtgagatttcacat 248  Q
    |  |||| ||||||||||||||||  ||| | ||||| |||||| |||||||||    
T  15607974 caagttatccacgtagaggcaacattttcaagcagaatgggtgatatttcacat 15608027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 20 - 248
Target Start/End: Original strand, 25505971 - 25506200
Alignment:
Q  20 ggcctcaacatagacaacttattaaa-atccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaagt--aagatccc 116  Q
    |||||||||||| ||||||||||||| || | || |  |||||||||||||||||  |||||  ||| |||||||| | |||||||||    |||||||     
T  25505971 ggcctcaacataaacaacttattaaagattctatttcaatggttcatcaacataat-tcataataat-acgtaacaaaaggaaaacaatgcaaagatcct 25506068  T
Q  117 catcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagaggc 216  Q
    ||||  |||||||||||||||||||||||||| ||||||||||||||||| |||| |||||| ||| || |||||| ||||  ||||| |||||||||||    
T  25506069 catcatgttacgtatcagagcgaccctaagacaacgcgtgagagagtcaactcacatcaacaactaatcatggttatctgcatgttacacacgtagaggc 25506168  T
Q  217 aacattccaccagaaggggtgagatttcacat 248  Q
    ||||||| | ||||| || |||||||||||||    
T  25506169 aacattcaaacagaatggatgagatttcacat 25506200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 33 - 140
Target Start/End: Original strand, 14187733 - 14187841
Alignment:
Q  33 acaacttattaaaatccaatctagatggttcatcaacataaaa-tcatatcaattacgtaacacatggaaaacaagtaagatccccatcccgttacgtat 131  Q
    ||||||||||||||||||| ||| || |||| ||||||||||| ||||| ||| ||||||||| ||||||||||||||||||| ||||||||||||||||    
T  14187733 acaacttattaaaatccaaactaaatagttcttcaacataaaaatcatagcaagtacgtaacatatggaaaacaagtaagatctccatcccgttacgtat 14187832  T
Q  132 cagagcgac 140  Q
    |||||||||    
T  14187833 cagagcgac 14187841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 9 - 192
Target Start/End: Original strand, 30139093 - 30139277
Alignment:
Q  9 aatggcacaatggcctcaacatagacaacttattaaaatc-caatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaag 107  Q
    |||||||| | |||||||||||| |||||||||||||||  || ||||| | ||||||||||||||  |||||  ||| |||||||| |||||||||||     
T  30139093 aatggcactacggcctcaacataaacaacttattaaaatttcattctaggtagttcatcaacataat-tcataataat-acgtaacaaatggaaaacaac 30139190  T
Q  108 t--aagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggtta 192  Q
       || ||||||||| |||||| |||||||||||||||||||||||||| || |||||||| ||||||||||| ||| || ||||||    
T  30139191 acaaatatccccatcacgttacatatcagagcgaccctaagacgacgcgagaaagagtcaactcacttcaacaactaatcctggtta 30139277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 22 - 171
Target Start/End: Complemental strand, 42876611 - 42876461
Alignment:
Q  22 cctcaacatagacaacttattaaaatc-caatctagatggttcatcaacataaaatcatatcaat-tacgtaacacatggaaaacaagt--aagatcccc 117  Q
    |||||||||| |||||||||||||||  || ||||||||||||||||||||||  ||| |  ||| ||||||||| |||||||||||    |||||| ||    
T  42876611 cctcaacataaacaacttattaaaatttcattctagatggttcatcaacataat-tcaaa--aatatacgtaacaaatggaaaacaatgcaaagatctcc 42876515  T
Q  118 atcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcac 171  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||| ||||    
T  42876514 atcccgttacgtattaaagcgaccctaagacgacgcgtgagagagtcaagtcac 42876461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 115 - 248
Target Start/End: Complemental strand, 45315804 - 45315673
Alignment:
Q  115 cccatcccgttacgtatcagagcgac-cctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtaga 213  Q
    |||||||||||||||||||||||||| ||||||||||| || |   || |||| |||| ||| ||| || || |||||| |||| | |||||||||||||    
T  45315804 cccatcccgttacgtatcagagcgactcctaagacgacacgag---gaatcaactcacatcagcagttactcctggttatctgcacattacccacgtaga 45315708  T
Q  214 ggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||||||| | ||||||||||||||||||||||    
T  45315707 ggcaacattcaaacagaaggggtgagatttcacat 45315673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 112 - 248
Target Start/End: Original strand, 10282636 - 10282770
Alignment:
Q  112 atccccatcccgttacgtatcagagcgac-cctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgt 210  Q
    |||| |||||||||||||||||||||||| |||||||| || || |   || |||| |||| ||| ||| || ||||||||| |||| ||||||||||||    
T  10282636 atcctcatcccgttacgtatcagagcgactcctaagacaacacgag---gaatcaactcacatcagcagttactcttggttatctgcacgttacccacgt 10282732  T
Q  211 agaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||| | |||||||||| |||||||||||    
T  10282733 agaggcaacattcaaacagaaggggtaagatttcacat 10282770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 112 - 248
Target Start/End: Original strand, 13163652 - 13163786
Alignment:
Q  112 atccccatcccgttacgtatcagagcgac-cctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgt 210  Q
    ||||||||||||||||||||||||| ||| ||||||||||| || |   || |||| |||| ||| | | || ||||||||| |||| ||||||||||||    
T  13163652 atccccatcccgttacgtatcagagtgactcctaagacgacacgag---gaatcaactcacatcagcggttactcttggttatctgcacgttacccacgt 13163748  T
Q  211 agaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||| | ||||| ||||||||||||||||    
T  13163749 agaggcaacattcaaacagaatgggtgagatttcacat 13163786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 112 - 248
Target Start/End: Original strand, 10271914 - 10272048
Alignment:
Q  112 atccccatcccgttacgtatcagagcgac-cctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgt 210  Q
    |||| |||||||||||||||||||||||| |||||||| || || |   || |||| |||| ||| ||| || ||||||||| |||| ||||||||||||    
T  10271914 atcctcatcccgttacgtatcagagcgactcctaagactacacgag---gaatcaactcacatcagcagttactcttggttatctgcacgttacccacgt 10272010  T
Q  211 agaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||| ||||||| | |||||||||| |||||||||||    
T  10272011 agaggtaacattcaaacagaaggggtaagatttcacat 10272048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 142
Target Start/End: Original strand, 19733695 - 19733832
Alignment:
Q  4 atcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaa 103  Q
    ||||||||||||||| ||||||||| || | ||||||||||| || | |||| |    || |||||||||| |||||  ||  |||||||||||| ||||    
T  19733695 atcgtaatggcacaacggcctcaacttaaataacttattaaattc-agtctaaacaaatcttcaacataaattcataataaacacgtaacacatgaaaaa 19733793  T
Q  104 caagtaagatccccatcccgttacgtatcagagcgaccc 142  Q
    |||| ||||| ||||||||||||||||||||||||||||    
T  19733794 caagcaagattcccatcccgttacgtatcagagcgaccc 19733832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 12621865 - 12621924
Alignment:
Q  189 gttacctgcgcgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||| |||| ||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  12621865 gttatctgcacgttacccacgtagaggcaacattcaaacagaaggggtgagatttcacat 12621924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 117 - 207
Target Start/End: Original strand, 37017877 - 37017966
Alignment:
Q  117 catcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttaccca 207  Q
    |||||||||||||||||||||||||||||||| ||  |||||||| || | ||||||||||||||| ||||| ||| ||||  ||||||||    
T  37017877 catcccgttacgtatcagagcgaccctaagac-acatgtgagagaatcgactcacttcaacagctaatcttgattatctgcaagttaccca 37017966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 180 - 247
Target Start/End: Original strand, 15364588 - 15364657
Alignment:
Q  180 ctattcttggttacctgcgcgttacccacgtagaggcaaca-ttcca-ccagaaggggtgagatttcaca 247  Q
    ||||||||||||||||||  ||||||||||||||||||||| |||||  |||||||||||||||||||||    
T  15364588 ctattcttggttacctgcaagttacccacgtagaggcaacatttccaggcagaaggggtgagatttcaca 15364657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 117 - 197
Target Start/End: Original strand, 25089920 - 25090002
Alignment:
Q  117 catcccgttacgtatcagagcgaccctaagacgacg---cgtgagagagtcaattcacttcaacagctattcttggttacctgc 197  Q
    ||||||||||||||||||||||||||||||||||||   | |||||||||| | ||||||| ||||||| ||||| ||||||||    
T  25089920 catcccgttacgtatcagagcgaccctaagacgacgacacatgagagagtctactcacttc-acagctaatcttgattacctgc 25090002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 248
Target Start/End: Original strand, 14476369 - 14476428
Alignment:
Q  189 gttacctgcgcgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||| |||| |||||||||||||||| |||||||| | ||||||||||||||||||||||    
T  14476369 gttatctgcacgttacccacgtagagacaacattcaaacagaaggggtgagatttcacat 14476428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 207
Target Start/End: Original strand, 16295872 - 16295964
Alignment:
Q  117 catcccgttacgtatcagagcgaccctaa---gacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttaccca 207  Q
    ||||| |||||||||||||||||||||||   |||||| |||||||||||| | ||||||| ||||||| ||||| ||||||||  ||||||||    
T  16295872 catcctgttacgtatcagagcgaccctaagatgacgacacgtgagagagtcgactcacttc-acagctaatcttgattacctgcaagttaccca 16295964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 4829252 - 4829202
Alignment:
Q  87 acgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagc 137  Q
    |||||||| |||||||||||  |||||||||||||||||||||||||||||    
T  4829252 acgtaacatatggaaaacaataaagatccccatcccgttacgtatcagagc 4829202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 4832547 - 4832497
Alignment:
Q  87 acgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagc 137  Q
    |||||||| |||||||||||  |||||||||||||||||||||||||||||    
T  4832547 acgtaacatatggaaaacaataaagatccccatcccgttacgtatcagagc 4832497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 4835842 - 4835792
Alignment:
Q  87 acgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagc 137  Q
    |||||||| |||||||||||  |||||||||||||||||||||||||||||    
T  4835842 acgtaacatatggaaaacaataaagatccccatcccgttacgtatcagagc 4835792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 17957753 - 17957818
Alignment:
Q  9 aatggcacaatggcctcaacatagacaacttattaaaa-tccaatctagatggttcatcaacataa 73  Q
    |||||||||| |||||||||||| ||||| |||||||| |||| ||||| ||||||||||||||||    
T  17957753 aatggcacaacggcctcaacataaacaacatattaaaattccattctaggtggttcatcaacataa 17957818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 248
Target Start/End: Complemental strand, 19567503 - 19567442
Alignment:
Q  187 tggttacctgcgcgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||| |||| ||||||||||||||| ||||||||| | |||||||||||| |||||||||    
T  19567503 tggttatctgcacgttacccacgtagatgcaacattcaaacagaaggggtgaaatttcacat 19567442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 151
Target Start/End: Original strand, 40228863 - 40228897
Alignment:
Q  117 catcccgttacgtatcagagcgaccctaagacgac 151  Q
    |||||||||||||||||||||||||||||||||||    
T  40228863 catcccgttacgtatcagagcgaccctaagacgac 40228897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 175
Target Start/End: Original strand, 16996793 - 16996856
Alignment:
Q  115 cccatcccgttacgtatcagagcgaccctaagacgacg---cgtgagagagtcaattcacttca 175  Q
    ||||| |||||||||||||||| |||||||||||||||   |||||||||||| | ||||||||    
T  16996793 cccattccgttacgtatcagagtgaccctaagacgacgacacgtgagagagtcgactcacttca 16996856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 144
Target Start/End: Original strand, 33185081 - 33185138
Alignment:
Q  87 acgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagcgacccta 144  Q
    |||||| | |||||||||||  |||||| ||||||||||| |||||||||||||||||    
T  33185081 acgtaaaatatggaaaacaataaagatcaccatcccgttatgtatcagagcgacccta 33185138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 9621164 - 9621227
Alignment:
Q  184 tcttggttacctgcgcgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||| |||| | ||||||||||||||||||||||| | |||||  |||||||||||||||    
T  9621164 tcttggttatctgcaccttacccacgtagaggcaacattcaaacagaa-tggtgagatttcacat 9621227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 14157392 - 14157446
Alignment:
Q  192 acctgcgcgttacccacg-tagaggcaacattccaccagaaggggtgagatttca 245  Q
    |||||| ||||||||||| | |||||||||||| | |||||||||||||||||||    
T  14157392 acctgcacgttacccacggtcgaggcaacattcaaacagaaggggtgagatttca 14157446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 14164097 - 14164151
Alignment:
Q  192 acctgcgcgttacccacg-tagaggcaacattccaccagaaggggtgagatttca 245  Q
    |||||| ||||||||||| | |||||||||||| | |||||||||||||||||||    
T  14164097 acctgcacgttacccacggtcgaggcaacattcaaacagaaggggtgagatttca 14164151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 15989067 - 15989117
Alignment:
Q  87 acgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagc 137  Q
    |||||||| |||||||||||  ||||||  |||||||||||||||||||||    
T  15989067 acgtaacatatggaaaacaataaagatcaacatcccgttacgtatcagagc 15989117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 248
Target Start/End: Original strand, 17957929 - 17957990
Alignment:
Q  187 tggttacctgcgcgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||| ||||  |||||| ||||||||||| ||||| | || |||||||||||||||||||    
T  17957929 tggttatctgcatgttaccaacgtagaggcagcattcaaacaaaaggggtgagatttcacat 17957990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 3184 - 3429
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaat-ccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgg 99  Q
    |||| ||||||||||||| | |||||| ||| ||||||||| ||||| ||| ||||| ||||||||||||||||| |||||  ||| |||||||||||||    
T  3184 aacaacgtaatggcacaacgacctcaaaataaacaacttatcaaaattccattctaggtggttcatcaacataaa-tcataaaaat-acgtaacacatgg 3281  T
Q  100 aaaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgc 199  Q
    |||  ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||| |||| |    
T  3282 aaacaaagcaagatccccatcc-gttacgtatcagagcgaccctaagacgacgcgtgagagagtcaaatcacttcaacaactaatcttggttatctgcac 3380  T
Q  200 gttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||    
T  3381 gttacccacgtagaggcaacattcaaacagaaggggtgagatttcacat 3429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 136; Significance: 5e-71; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 6 - 236
Target Start/End: Original strand, 14054 - 14283
Alignment:
Q  6 cgtaatggcacaatggcctcaacatagacaacttattaaaatccaat-ctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaac 104  Q
    ||||||||||||| | |||||||||| ||||||||||||||| | || |||| |||||||||||||||||||||||  ||| ||||||||||||||||||    
T  14054 cgtaatggcacaacgacctcaacata-acaacttattaaaattctattctaggtggttcatcaacataaaatcataaaaat-acgtaacacatggaaaac 14151  T
Q  105 aagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttac 204  Q
    ||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| |||||| |||| ||||||    
T  14152 aagcaagatcctcatcccgttacgtatcagagcgaccctaagatgacgcgtgagagagtcaactcacttcaacagctattcctggttatctgcacgttac 14251  T
Q  205 ccacgtagaggcaacattccaccagaaggggt 236  Q
    ||| ||||||||||||||| |  |||||||||    
T  14252 ccatgtagaggcaacattcaaatagaaggggt 14283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 14 - 248
Target Start/End: Complemental strand, 8000 - 7766
Alignment:
Q  14 cacaatggcctcaacatagacaacttattaaaat-ccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaagtaaga 112  Q
    ||||| |||||||| ||| | ||||||||||||| ||||||||| |||||||||||||||||||||||  ||| |||||||||||| |||||||| ||||    
T  8000 cacaacggcctcaatataaataacttattaaaattccaatctaggtggttcatcaacataaaatcatagaaat-acgtaacacatgcaaaacaagcaaga 7902  T
Q  113 tccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtag 212  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||| |||||| || ||| |||| || | |||| ||||    
T  7901 tccccatcccgttacgtatcagagcgaccctaagacgacgcgtaagagagtcaactgacttcaacaactattcctgattatctgcacgatgcccatgtag 7802  T
Q  213 aggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||| | |||||||||||| |||||||||    
T  7801 aggcaacattcaaacagaaggggtgaaatttcacat 7766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 126; Significance: 5e-65; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 23 - 248
Target Start/End: Complemental strand, 4571 - 4347
Alignment:
Q  23 ctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaagtaagatccccatccc 122  Q
    ||||||||| |||||||| |||| |||| | |||||||| ||||||||||||||||||  ||| ||||||||||||||||| ||  ||||||||||||||    
T  4571 ctcaacataaacaacttaataaattccattatagatggtccatcaacataaaatcatagaaat-acgtaacacatggaaaaaaatcaagatccccatccc 4473  T
Q  123 gttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagaggcaacatt 222  Q
    ||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||| ||||||  ||| ||||||||| ||| ||||||||||    
T  4472 gttacgtatcagagcgaccataagacaacgcgtgagagagtcaactcacttcaacagctattcctggttatttgcacgttacccatgtataggcaacatt 4373  T
Q  223 ccaccagaaggggtgagatttcacat 248  Q
    | | || |||||||||||||||||||    
T  4372 caaacaaaaggggtgagatttcacat 4347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 126; Significance: 5e-65; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 127986 - 127738
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgga 100  Q
    |||||||||||||||||| ||||||||| || ||||||||||||||| || ||||||    || ||||||||||  |||| |||||||||||||||||||    
T  127986 aacatcgtaatggcacaacggcctcaacttaaacaacttattaaaattcagtctagacaaatcttcaacataaac-cataacaattacgtaacacatgga 127888  T
Q  101 aaacaagtaag-atccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggtt-acctgcg 198  Q
    || |||||||  || |||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| |||| || | ||||     
T  127887 aagcaagtaaatattcccatctcgttacgtatcagagcgaccctaagacgacacgtgagagagtcaactcacttcaacagctatccttgattaatctgca 127788  T
Q  199 cgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||||||||||||| |||||||| | ||||||||||||||||||||||    
T  127787 cgttacccacgtagagacaacattcaaacagaaggggtgagatttcacat 127738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 125; Significance: 2e-64; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 65 - 248
Target Start/End: Original strand, 27828 - 28012
Alignment:
Q  65 tcaacataaaatcatatcaattacgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtc 164  Q
    |||||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||| ||    
T  27828 tcaacataaaatcataacagttacgtaacacatggaaaacaagtaagatccccatcccattacgtatcaaagcgaccctaagacgacacgtgagagactc 27927  T
Q  165 aattcacttcaacagctattcttggtt-acctgcgcgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    || |||||||||||||||| |||| || | |||| ||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  27928 aactcacttcaacagctatccttgattaatctgcacgttacccacgtagaggcaacattcaaacagaaggggtgagatttcacat 28012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 11 - 179
Target Start/End: Complemental strand, 48311 - 48143
Alignment:
Q  11 tggcacaatggcctcaacatagacaacttatt-aaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaagta 109  Q
    |||||||| ||||||||| || |||||||||| |||||||| ||||||    || |||||||||| |||||  || |||| |||||||||||| |||  |    
T  48311 tggcacaacggcctcaacttaaacaacttatttaaaatccagtctagacaaatcttcaacataaattcataataaatacgcaacacatggaaa-caatca 48213  T
Q  110 agat-ccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacag 179  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||    
T  48212 agattccccatcccgttacgtatcagagcgaccctaagacgacacgtgagagagtc-actcacttcaacag 48143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 3163 - 3410
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaat-ccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgg 99  Q
    |||| ||||||||||||| |||||||||||| |||||||||||| || ||  ||||| ||||||||||| ||||| |||||  ||| ||||||||||| |    
T  3163 aacaacgtaatggcacaacggcctcaacataaacaacttattaatattcctttctaggtggttcatcaagataaa-tcataaaaat-acgtaacacatag 3260  T
Q  100 aaaacaagt-aagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcg 198  Q
    |||||||   |||||| |||||  |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||| ||||     
T  3261 aaaacaaaacaagatcaccatcttgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaactcacttcagcagctattcctggttatctgca 3360  T
Q  199 cgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  3361 cgttacccacgtagaggcaacattcaaacagaaggtgtgagatttcacat 3410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 114; Significance: 7e-58; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 94755 - 95003
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgga 100  Q
    ||||||||  |||||||| ||||||||| || |||||||||||||||||| ||||||    || ||||||||||||||||  || || ||||||||||||    
T  94755 aacatcgtgttggcacaacggcctcaacttaaacaacttattaaaatccagtctagacaaatcttcaacataaaatcataataaatatgtaacacatgga 94854  T
Q  101 aaacaagtaa-gatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggtt-acctgcg 198  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||||||| | ||| |||||| | ||||||||||| |||| |||| || | ||||     
T  94855 aaacaagtaaagatcccaatcccgttacgtatcagagcgaccctaagacgacacatgaaagagtc-actcacttcaacaactatccttgcttaatctgca 94953  T
Q  199 cgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||| ||||||||||||||||||| | ||||||||||||||||||||||    
T  94954 cgttatccacgtagaggcaacattcaaacagaaggggtgagatttcacat 95003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 9 - 250
Target Start/End: Complemental strand, 66911 - 66669
Alignment:
Q  9 aatggcacaatggcctcaacatagacaacttattaaaat-ccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaa- 106  Q
    |||||||| | |||||||||||| ||||||||||||||| ||| ||||| ||||||||||||||||  |||||   ||| ||||||| |||||||||||     
T  66911 aatggcactacggcctcaacataaacaacttattaaaattccattctaggtggttcatcaacataat-tcataaatatt-cgtaacaaatggaaaacaat 66814  T
Q  107 gt-aagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacc 205  Q
    || |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||| |  |||||  ||||  ||||||    
T  66813 gtcaagatctccatcccgttacgtatcagagcgaccctaagacgacgcgttagagagtcaactcacatcaacagctaattctggttttctgcatgttacc 66714  T
Q  206 cacgtagaggcaacattccaccagaaggggtgagatttcacataa 250  Q
    |||||||||||||||||| | ||||||||||||||||||||||||    
T  66713 cacgtagaggcaacattcaaacagaaggggtgagatttcacataa 66669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 58 - 248
Target Start/End: Original strand, 2803 - 2992
Alignment:
Q  58 tggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaagt-aagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtg 156  Q
    ||||||||||||||||| |||||  ||| ||||||||||||||||||||   ||||||||| |||||||||||||||||||||||||||||||||| |||    
T  2803 tggttcatcaacataaa-tcataaaaat-acgtaacacatggaaaacaaaacaagatccccgtcccgttacgtatcagagcgaccctaagacgacgtgtg 2900  T
Q  157 agagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||||||| ||||||||||| |||||| |||||| |||| ||||||||||||||||||||||||| | |||||||||| |||||||||||    
T  2901 agagagtcaactcacttcaacaactattcctggttatctgcacgttacccacgtagaggcaacattcaaacagaaggggtaagatttcacat 2992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 86 - 248
Target Start/End: Original strand, 16855 - 17017
Alignment:
Q  86 tacgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattc 185  Q
    |||||||||||||||||||||  ||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||| |||||    
T  16855 tacgtaacacatggaaaacaatcaagatcctcatcccgttacgtatcagagcgactctaagacaacgcgtgagagagtcaactcacttcaacagttattc 16954  T
Q  186 ttggttacctgcgcgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
     |||||| |||| ||||||||||||||||||||||||| | |||||||||| |||||||||||    
T  16955 atggttatctgcacgttacccacgtagaggcaacattcaaacagaaggggtaagatttcacat 17017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 104; Significance: 7e-52; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 65 - 248
Target Start/End: Complemental strand, 1501 - 1314
Alignment:
Q  65 tcaacataaaatcatatcaattacgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacg---cgtgagaga 161  Q
    ||||||||||||||||  || |||||||||||||||||||| | || |||||||||||||||||||||||||||||||||||||| ||   |||||||||    
T  1501 tcaacataaaatcataataaatacgtaacacatggaaaaca-gcaaaatccccatcccgttacgtatcagagcgaccctaagacgtcgacacgtgagaga 1403  T
Q  162 gtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagaggcaacattcc--accagaaggggtgagatttcacat 248  Q
    ||| | ||||||||||||||||||||| ||||||||  ||||||||||||||||||||||| |  | ||||||||||||||||||||||    
T  1402 gtcgactcacttcaacagctattcttgattacctgcaagttacccacgtagaggcaacatttctaagcagaaggggtgagatttcacat 1314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 103; Significance: 3e-51; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 6 - 182
Target Start/End: Complemental strand, 843 - 666
Alignment:
Q  6 cgtaatggcacaatggcctcaacatagacaacttattaaaat-ccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaac 104  Q
    ||||||||||||| |||||||||||| ||||||||||||||| ||| ||||| || |||||||| ||||||| |||  ||| ||||||||||||||||||    
T  843 cgtaatggcacaacggcctcaacataaacaacttattaaaattccattctaggtgattcatcaatataaaattatagaaat-acgtaacacatggaaaac 745  T
Q  105 aa-gtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagcta 182  Q
    || | |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  744 aaagcaagatccccatcgcgttacgtatcagagcgaccctaagacgacacgtgagagagtcaactcacttcaacagcta 666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 6494 - 6246
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaat-ccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgg 99  Q
    |||| ||||||| ||||| |||||||||||| ||||||||||||||| ||| | ||| | ||||||||||||||  |||||  ||| |||||||| ||||    
T  6494 aacaacgtaatgacacaacggcctcaacataaacaacttattaaaattccattataggtagttcatcaacataat-tcataataat-acgtaacaaatgg 6397  T
Q  100 aaaaca--agtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgc 197  Q
    |||| |  |  || |||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||| || |||||  ||||    
T  6396 aaaatagcacaaatatccccatcccgttacgtatcagagcgaccctaagatgacgcgtgagagagtcaactcacttcaacaactaatcatggttttctgc 6297  T
Q  198 gcgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
     | ||||||||||||||||||||||| | || ||||||||| |||||||||    
T  6296 acattacccacgtagaggcaacattcaaacaaaaggggtgaaatttcacat 6246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 21 - 248
Target Start/End: Original strand, 2844 - 3072
Alignment:
Q  21 gcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaagtaagatccccatc 120  Q
    |||||||| || |||||||||||||||||| | || |    || ||||||||||||||||  || || ||||||||||||||||||   | |||||||||    
T  2844 gcctcaacttaaacaacttattaaaatccagtttaaacaaatcttcaacataaaatcataataaata-gtaacacatggaaaacaaacgaaatccccatc 2942  T
Q  121 ccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagaggcaaca 220  Q
    | ||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||  |||||||  |||||||||||||||||||||    
T  2943 ctgttacgtatcagagcgaccctaagatgacacgtgagagagtcaactcacttcaacagctattcttgaatacctgcaagttacccacgtagaggcaaca 3042  T
Q  221 tt--ccaccagaaggggtgagatttcacat 248  Q
    ||  | | |||||||||||| |||||||||    
T  3043 tttccaagcagaaggggtgaaatttcacat 3072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 6 - 248
Target Start/End: Complemental strand, 998 - 756
Alignment:
Q  6 cgtaatggcacaatggcctcaacatagacaacttattaaaat-ccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaac 104  Q
    ||||||||||| |  ||||||||||| ||||||| ||||||| ||| ||||  ||||||||||||||||  |||||  ||| |||||||||| || ||||    
T  998 cgtaatggcactaccgcctcaacataaacaacttcttaaaattccattctaagtggttcatcaacataat-tcataaaaat-acgtaacacaagggaaac 901  T
Q  105 aagt--aagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgtt 202  Q
    ||    |||||||||||||| |||||||||||||| |||||||||||||||||||||||||| | |||| |||||| |||||| | |||| |||| ||||    
T  900 aatgcaaagatccccatccctttacgtatcagagc-accctaagacgacgcgtgagagagtcgactcacatcaacaactattccttgttatctgcacgtt 802  T
Q  203 acccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||    
T  801 acccacgtagaggcaacattcaaacagaaggggtgagatttcacat 756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0401 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 55 - 248
Target Start/End: Original strand, 7267 - 7460
Alignment:
Q  55 agatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaagt--aagatccccatcccgttacgtatcagagcgaccctaagacgacg 152  Q
    |||||||||||||||||||  |||||  ||| |||||||| |||||||||||    || |||||| ||||||||||||||||||||| ||||||||||||    
T  7267 agatggttcatcaacataat-tcataataat-acgtaacaaatggaaaacaatacaaatatccccttcccgttacgtatcagagcgatcctaagacgacg 7364  T
Q  153 cgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||||||||||| ||||||||||| ||| |||| |||| |||| ||||||||||||||||||||||||| | ||||| ||||||||||||||||    
T  7365 cgtgagagagtcaactcacttcaacaactaatcttagttatctgcacgttacccacgtagaggcaacattcaaacagaatgggtgagatttcacat 7460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 16920 - 17169
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgga 100  Q
    ||||||||  |||||||| ||||||||| |  |||||||||||||||| | | || |    || ||||||||||||||||  || ||||||||| |||||    
T  16920 aacatcgtgttggcacaacggcctcaactttaacaacttattaaaatcaagtttaaacaaatcttcaacataaaatcataataaatacgtaacatatgga 17019  T
Q  101 aaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcg 200  Q
    ||||||| || ||||||||| |||||||||| |||| |||||||||| ||| |||||||||||||| ||||||||||||||||| ||  ||||||||  |    
T  17020 aaacaagcaaaatccccatctcgttacgtattagagtgaccctaagatgacacgtgagagagtcaactcacttcaacagctattattcattacctgcaag 17119  T
Q  201 ttacccacgtagaggcaacatt--ccaccagaaggggtgagatttcacat 248  Q
    ||||||| ||||||||||||||  | | |||||||| |||||||||||||    
T  17120 ttacccatgtagaggcaacatttccaagcagaagggctgagatttcacat 17169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 94; Significance: 6e-46; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 9 - 248
Target Start/End: Complemental strand, 8719 - 8479
Alignment:
Q  9 aatggcacaatggcctcaacatagacaacttattaaaat-ccaatctagatggttcatcaacataaaatcatatcaat-tacgtaacacatggaaaacaa 106  Q
    |||||||| | ||||| |||||| ||||||||||||||| ||| ||||  ||||||||||||||||  |||||  ||| ||| ||||| |||||||||||    
T  8719 aatggcactacggccttaacataaacaacttattaaaattccattctaagtggttcatcaacataat-tcata--aatatacataacaaatggaaaacaa 8623  T
Q  107 gt--aagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttac 204  Q
        ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||| ||| |  |||||| ||||  |||||    
T  8622 tgcaaagatcctcatcccgttacgtatcagagtgaccctaagacgacgcgtgagagagtcaactcacatcaacaactaattatggttatctgcatgttac 8523  T
Q  205 ccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||| |||||||||||| | ||||||||||||||||||||||    
T  8522 ccacgtggaggcaacattcaaacagaaggggtgagatttcacat 8479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 109 - 248
Target Start/End: Original strand, 17572 - 17711
Alignment:
Q  109 aagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccac 208  Q
    ||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||| || || |||||| |||| ||||||||||    
T  17572 aagatcctcatcccattacgtatcagagcgacccgaagacgacgcgtgagagagtcaactcacatcaacagataatcctggttatctgcacgttacccac 17671  T
Q  209 gtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  17672 gtagaggcaacattcaaacagaaggggtgagatttcacat 17711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 91; Significance: 4e-44; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 65 - 248
Target Start/End: Original strand, 7547 - 7732
Alignment:
Q  65 tcaacataaaatcatatcaattacgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtc 164  Q
    ||||||||||||||||  || |||||| ||||||||||||||| |  |||||||||| | || |||||||| ||||||||||||||| ||||||||||||    
T  7547 tcaacataaaatcataataaatacgtagcacatggaaaacaagcagaatccccatcctgctatgtatcagatcgaccctaagacgacacgtgagagagtc 7646  T
Q  165 aattcacttcaacagctattcttggttacctgcgcgttacccacgtagaggcaacatt--ccaccagaaggggtgagatttcacat 248  Q
    || ||||||||||| |||| |||| |||||||   |||||||||||||||||||||||  | | ||||||||||||||||||||||    
T  7647 aactcacttcaacaactatccttgattacctgtaagttacccacgtagaggcaacatttccaagcagaaggggtgagatttcacat 7732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 25361 - 25324
Alignment:
Q  144 aagacgacgcgtgagagagtcaattcacttcaacagct 181  Q
    |||||||| |||||||||||||| ||||||||||||||    
T  25361 aagacgacacgtgagagagtcaactcacttcaacagct 25324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0742 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0742
Description:

Target: scaffold0742; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 109 - 242
Target Start/End: Original strand, 2470 - 2603
Alignment:
Q  109 aagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccac 208  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||| || |||||| |||| |||||| |||    
T  2470 aagatccccatcccgttacgtatcagagcgaccctaagacgacacgtgagagagtcaactcacatcaacagctaatcctggttatctgcacgttactcac 2569  T
Q  209 gtagaggcaacattccaccagaaggggtgagatt 242  Q
    ||||||||||||||| | |||||| |||||||||    
T  2570 gtagaggcaacattcaaacagaagtggtgagatt 2603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 113 - 242
Target Start/End: Original strand, 1376 - 1505
Alignment:
Q  113 tccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtag 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||| |||||| || |||||| |||| ||||||||||||||    
T  1376 tccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagttaactcacatcagcagctaatcctggttatctgcacgttacccacgtag 1475  T
Q  213 aggcaacattccaccagaaggggtgagatt 242  Q
    ||||||||||| | ||||||||||||||||    
T  1476 aggcaacattcaaacagaaggggtgagatt 1505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 123 - 248
Target Start/End: Original strand, 39186 - 39311
Alignment:
Q  123 gttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagaggcaacatt 222  Q
    ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| || || ||| |||| ||||||||||||||||||||||||    
T  39186 gttacgtatcagagcgaccctaagacgacacgtgagagagtcaactcacttcaacagctaatcctgattatctgcacgttacccacgtagaggcaacatt 39285  T
Q  223 ccaccagaaggggtgagatttcacat 248  Q
    | | ||||||||||||||||||||||    
T  39286 caaacagaaggggtgagatttcacat 39311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0645 (Bit Score: 89; Significance: 6e-43; HSPs: 1)
Name: scaffold0645
Description:

Target: scaffold0645; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 20 - 248
Target Start/End: Complemental strand, 1269 - 1040
Alignment:
Q  20 ggcctcaacatagacaacttattaaaat-ccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaagt--aagatccc 116  Q
    ||||| |||||| ||||||||||||||| ||| ||||  ||||||||||||||||  |||||  ||| | |||||| |||||||||||    || || |     
T  1269 ggcctgaacataaacaacttattaaaattccattctacgtggttcatcaacataat-tcataataat-atgtaacaaatggaaaacaacacaaatattct 1172  T
Q  117 catcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagaggc 216  Q
    |||| |||||||||||||||||| ||||||| |||||||||||||||||| ||| ||||||||||| || |||||| ||||  |||||||||||||||||    
T  1171 catctcgttacgtatcagagcgatcctaagatgacgcgtgagagagtcaactcatttcaacagctaatcatggttatctgcatgttacccacgtagaggc 1072  T
Q  217 aacattccaccagaaggggtgagatttcacat 248  Q
    ||||||| | ||||||||||||||||||||||    
T  1071 aacattcaaacagaaggggtgagatttcacat 1040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 121 - 248
Target Start/End: Original strand, 55449 - 55576
Alignment:
Q  121 ccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagaggcaaca 220  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||| || |||||| |||| ||||||||||||||||||||||    
T  55449 ccgttacgtattagagcgaccctaagacgacgcgtgagagagtcaactcactttaacagctaatcctggttatctgcacgttacccacgtagaggcaaca 55548  T
Q  221 ttccaccagaaggggtgagatttcacat 248  Q
    ||| | |||||||||| |||||||||||    
T  55549 ttcaaacagaaggggtaagatttcacat 55576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 87; Significance: 9e-42; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 9 - 248
Target Start/End: Complemental strand, 19617 - 19379
Alignment:
Q  9 aatggcacaatggcctcaacatagacaacttattaaaat-ccaatctagatggttcatcaacataaaatcatatcaat-tacgtaacacatggaaaacaa 106  Q
    |||||||| | ||||| |||||  ||||||||||||||| ||| ||||| ||||||||||||||||  |||||  ||| ||||||||| |||||||||||    
T  19617 aatggcactacggccttaacattaacaacttattaaaattccattctaggtggttcatcaacataat-tcata--aatatacgtaacaaatggaaaacaa 19521  T
Q  107 gt--aagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttac 204  Q
        ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| |||| |||||| ||| |  |||  | |||| |||||     
T  19520 tgcaaagatccccatcccgttacgtatcagagcgaccataagatgacgcgtgagagagtcaactcacatcaacaactaattctgg--atctgcacgttat 19423  T
Q  205 ccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||||||||| | |||| |||||||||||||||||    
T  19422 ccacgtagaggcaacattcaaacagatggggtgagatttcacat 19379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 87; Significance: 9e-42; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 48669 - 48799
Alignment:
Q  112 atccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgta 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| || ||| || |||||| ||||  ||||||||||||    
T  48669 atccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaactcacatcagcaactaatcctggttatctgcatgttacccacgta 48768  T
Q  212 gaggcaacattccaccagaaggggtgagatt 242  Q
    |||||||||||| | ||||||||||||||||    
T  48769 gaggcaacattcaaacagaaggggtgagatt 48799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 112 - 248
Target Start/End: Complemental strand, 1065 - 929
Alignment:
Q  112 atccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgta 211  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| || | |||| |||| |||||||||||||    
T  1065 atccccattccgttacgtatcagagcgaccctaagacgacgcttgagagagtcaactcacttcaacagctaatcctagttatctgcacgttacccacgta 966  T
Q  212 gaggcaacattccaccagaaggggtgagatttcacat 248  Q
    || ||||||||| | ||||||||||||| ||| ||||    
T  965 gaagcaacattcaaacagaaggggtgaggttttacat 929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 1161 - 1120
Alignment:
Q  6 cgtaatggcacaatggcctcaacatagacaacttattaaaat 47  Q
    ||||||||||| | |||||||||||| |||||||||||||||    
T  1161 cgtaatggcactacggcctcaacataaacaacttattaaaat 1120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 112 - 248
Target Start/End: Complemental strand, 188604 - 188468
Alignment:
Q  112 atccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgta 211  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||| |||||||| || || |||||| |||| |||||||||| ||    
T  188604 atccccatcccgttacctatcagagcgatcctaagacgacgcgtgagagagtcaactcatttcaacagttaatcctggttatctgcacgttacccacata 188505  T
Q  212 gaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||||||||| | |||||||||||| |||||||||    
T  188504 gaggcaacattcaaacagaaggggtgatatttcacat 188468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 117 - 248
Target Start/End: Original strand, 59822 - 59955
Alignment:
Q  117 catcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagaggc 216  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||| ||||||||  |||||||||||||||||    
T  59822 catcccgttacgtataagagcgaccctaagacgacacgtgagagagtcaaatcacttcaacatctattcttgattacctgcaagttacccacgtagaggc 59921  T
Q  217 aacatt--ccaccagaaggggtgagatttcacat 248  Q
    | ||||  | | ||||||||||||||||||||||    
T  59922 agcatttccaaacagaaggggtgagatttcacat 59955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 11 - 197
Target Start/End: Complemental strand, 4121 - 3932
Alignment:
Q  11 tggcacaatggcctcaacatagacaactta-ttaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaagta 109  Q
    |||||||| ||||||||| || |||||||| |||||||||||| || |     | |||||||||||||||   || ||| |||||||||||||||||| |    
T  4121 tggcacaacggcctcaacttaaacaacttaattaaaatccaatttaaacaaaacttcaacataaaatcatgataaatacataacacatggaaaacaagca 4022  T
Q  110 agatccccatcccgttacgtatcagagcgaccctaagacgacg---cgtgagagagtcaattcacttcaacagctattcttggttacctgc 197  Q
    | |||| ||||||||||||||||||||||||||||||||||||   ||| || || |||  ||||||||| ||||||||||| || |||||    
T  4021 a-atcctcatcccgttacgtatcagagcgaccctaagacgacgacacgtcagcgaatcatctcacttcaatagctattcttgatttcctgc 3932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 248
Target Start/End: Original strand, 704 - 951
Alignment:
Q  4 atcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaa 103  Q
    ||||||||||||||| ||||||||| || | ||||||||||| |||| |||| |    || |||||| ||| ||||| |||  |||||||||||||||||    
T  704 atcgtaatggcacaacggcctcaacttaaataacttattaaa-tccagtctaaacatatcttcaacagaaattcataacaaacacgtaacacatggaaaa 802  T
Q  104 caagtaagat-ccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgtt 202  Q
    |||| || || ||||||||| |||||||||||||||||||||||||||| ||| |||||||| | |||||||||||||||  |||| ||||||||  |||    
T  803 caagcaaaattccccatcccattacgtatcagagcgaccctaagacgacacgtcagagagtc-actcacttcaacagctaaccttgattacctgcaagtt 901  T
Q  203 accca--cgtagaggcaacatt--ccaccagaaggggtgagatttcacat 248  Q
    |||||   ||| ||||||||||  | | ||||||||||||||||||||||    
T  902 acccaattgtaaaggcaacatttccaagcagaaggggtgagatttcacat 951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 65 - 207
Target Start/End: Original strand, 4273 - 4415
Alignment:
Q  65 tcaacataaaatcatatcaattacgtaacacatggaaaacaagtaagatc-cccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagt 163  Q
    |||||||||| |||||  ||  ||||||||||||||||||||| || ||  ||| |||| |||||||||||||||||||||||||||| |||||||||||    
T  4273 tcaacataaattcataataaacacgtaacacatggaaaacaagcaaaatttcccgtcccattacgtatcagagcgaccctaagacgacacgtgagagagt 4372  T
Q  164 caattcacttcaacagctattcttggttacctgcgcgttaccca 207  Q
    | | ||||||||||| |||  |||| ||||||||  ||||||||    
T  4373 c-actcacttcaacaactaaccttgattacctgcaagttaccca 4415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1243 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: scaffold1243
Description:

Target: scaffold1243; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 86 - 248
Target Start/End: Complemental strand, 942 - 776
Alignment:
Q  86 tacgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacg---cgtgagagagtcaattcacttcaacagcta 182  Q
    |||||||||||||||||||| | || ||||||||||||||| || ||||||||| ||||||||||||   |||||||||||||| |||||||||||||||    
T  942 tacgtaacacatggaaaaca-gcaaaatccccatcccgttatgtttcagagcgaacctaagacgacgacacgtgagagagtcaactcacttcaacagcta 844  T
Q  183 ttcttggttacctgcgcgttacccacgtagaggcaacatt--ccaccagaaggggtgagatttcacat 248  Q
    |||||| |||||| |  |||||||||||||||||||||||  | | ||||| |||||| |||||||||    
T  843 ttcttgattacctacaagttacccacgtagaggcaacatttccaagcagaatgggtgaaatttcacat 776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 65 - 248
Target Start/End: Original strand, 5194 - 5383
Alignment:
Q  65 tcaacataaaatcatatcaattacgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacg---cgtgagaga 161  Q
    |||||||||||||||   || |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||   ||||||| |    
T  5194 tcaacataaaatcatgataaatacgtaacacatggaaaacaagcaa-atccccatcccgttacgtatcagagcgaccctaagacgacgacacgtgagaaa 5292  T
Q  162 gtcaattcacttcaacagctattcttggttacctgcgcgttaccca--cgtagaggcaacatt--ccaccagaaggggtgagatttcacat 248  Q
    ||||  ||||||||||| ||||||||| || |||||  ||||||||   ||| ||||||||||  | | ||||||||||||||||||||||    
T  5293 gtcatctcacttcaacaactattcttgatttcctgcaagttacccaattgtaaaggcaacatttccaagcagaaggggtgagatttcacat 5383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0382 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: scaffold0382
Description:

Target: scaffold0382; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 65 - 248
Target Start/End: Original strand, 15892 - 16081
Alignment:
Q  65 tcaacataaaatcatatcaattacgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacg---cgtgagaga 161  Q
    |||||||||||||||   || |||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||   |||||||||    
T  15892 tcaacataaaatcatgataaatacgtaacacatggaaaacaagcaa-atccccatcccattacgtatcagagcgaccctaagacgacgacacgtgagaga 15990  T
Q  162 gtcaattcacttcaacagctattcttggttacctgcgcgttaccca--cgtagaggcaacatt--ccaccagaaggggtgagatttcacat 248  Q
    ||||  ||||||||||||||||||||| || | |||  ||||||||   ||| ||||||||||  | | ||||||||||||||||||||||    
T  15991 gtcatctcacttcaacagctattcttgatttcttgcaagttacccaattgtaaaggcaacatttccaagcagaaggggtgagatttcacat 16081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 77; Significance: 9e-36; HSPs: 2)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 113 - 241
Target Start/End: Complemental strand, 28112 - 27984
Alignment:
Q  113 tccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtag 212  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||||||| |||| ||| |||||| || |||||| |||| ||||||||||||||    
T  28112 tccccatcccattacatatcagagcgaccctaagacgacgcgtgagagagtcaactcacatcagcagctaatcctggttatctgcacgttacccacgtag 28013  T
Q  213 aggcaacattccaccagaaggggtgagat 241  Q
    ||||||||||  | || ||||||||||||    
T  28012 aggcaacatttaaacaaaaggggtgagat 27984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 116 - 242
Target Start/End: Complemental strand, 10671 - 10545
Alignment:
Q  116 ccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagagg 215  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||| ||| |||||| || |||||| || |  ||||||||| ||||||    
T  10671 ccatcgcgttacgtatcagagcgaccctaagacaacgcgtgagagagtcaactcacatcagcagctaatcctggttatctacatgttacccacttagagg 10572  T
Q  216 caacattccaccagaaggggtgagatt 242  Q
    |||||||| | ||||||||||||||||    
T  10571 caacattcaaacagaaggggtgagatt 10545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 76; Significance: 3e-35; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 9 - 238
Target Start/End: Complemental strand, 17906 - 17675
Alignment:
Q  9 aatggcacaatggcctcaacatagacaacttattaaaa--tccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaa 106  Q
    |||| ||| |||||||||||||| ||||||| ||||||  || | |  | |||||||||||| ||||| |||||  ||| ||||||||  ||||||||||    
T  17906 aatgacactatggcctcaacataaacaacttcttaaaaattcgatttcaaatggttcatcaatataaa-tcataataat-acgtaacaattggaaaacaa 17809  T
Q  107 gt--aagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttac 204  Q
        || ||||||||| |||||||||||||||||||| |||||||||||||||||||||||| |||| ||| || ||| || |||||| |||| ||||||    
T  17808 tacaaatatccccatctcgttacgtatcagagcgaccataagacgacgcgtgagagagtcaactcacatcagcaactaatcctggttaactgcacgttac 17709  T
Q  205 ccacgtagaggcaacattccaccagaaggggtga 238  Q
    |||||||||||||| |||| | ||||||||||||    
T  17708 ccacgtagaggcaatattcaaacagaaggggtga 17675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 119 - 234
Target Start/End: Complemental strand, 19390 - 19275
Alignment:
Q  119 tcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagaggcaa 218  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||| |||  |||  | ||| ||||||||| |||  ||||||||||||||||||||    
T  19390 tcccgttacgtatcagagcgaccctaagacgatgcgtgaaagagtcaactcatatcagtaactaatcttggttatctggacgttacccacgtagaggcaa 19291  T
Q  219 cattccaccagaaggg 234  Q
    ||||| | ||||||||    
T  19290 cattcaaacagaaggg 19275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 187 - 248
Target Start/End: Complemental strand, 83391 - 83330
Alignment:
Q  187 tggttacctgcgcgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||| |||| ||||||||||||||||||||||||| | |||||||||||| |||||||||    
T  83391 tggttatctgcacgttacccacgtagaggcaacattcaaacagaaggggtgaaatttcacat 83330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 17498 - 17675
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaatccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgga 100  Q
    |||| ||||||||||||| ||||||||| || || ||||||||||||||| ||||||    || |||||||||| |||||  || || ||||||||||||    
T  17498 aacaacgtaatggcacaacggcctcaacttaaacgacttattaaaatccagtctagacaaatcttcaacataaattcataataaatatgtaacacatgga 17597  T
Q  101 aaacaagtaaga-tccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaaca 178  Q
    ||||||| |||| ||||||||||||||||||||| ||| |||| |||||||| |||||||||||| | |||||||||||    
T  17598 aaacaagcaagaatccccatcccgttacgtatcaaagcaacccgaagacgacacgtgagagagtc-actcacttcaaca 17675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 65 - 248
Target Start/End: Complemental strand, 79123 - 78934
Alignment:
Q  65 tcaacataaaatcatatcaattacgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagcgaccctaag---acgacgcgtgagaga 161  Q
    |||||||||||||||   || |||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||   ||||| |||||||||    
T  79123 tcaacataaaatcatgataaatacgtaacacatggaaaacaagcaa-atctccatcccgttacgtatcagagcgaccctaagacaacgacccgtgagaga 79025  T
Q  162 gtcaattcacttcaacagctattcttggttacctgcgcgttaccca--cgtagaggcaacatt--ccaccagaaggggtgagatttcacat 248  Q
    ||||  ||||||||||| ||||||||| || |||||  ||||||||   ||| ||||||||||  | | ||||||||||||||||||||||    
T  79024 gtcatctcacttcaacacctattcttgatttcctgcaagttacccaattgtaaaggcaacatttccaagcagaaggggtgagatttcacat 78934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 7 - 248
Target Start/End: Complemental strand, 5339 - 5106
Alignment:
Q  7 gtaatggcacaatggcctcaacatagacaacttattaaaatc-caatctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaaca 105  Q
    |||||||||| | |||||||||||| |||||||||||||||  || ||||| | ||||||||||||||  |||||  ||| |||||  | ||||||||||    
T  5339 gtaatggcaccacggcctcaacataaacaacttattaaaatttcattctaggtagttcatcaacataat-tcataataat-acgtattaaatggaaaaca 5242  T
Q  106 agtaagat--ccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgtta 203  Q
    |   | ||  | ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| || ||| |||           
T  5241 acacaaataactccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaactcgcttcaacagctattcctgattatctg------- 5149  T
Q  204 cccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
      |||||||||||||||||| | ||||| ||||||||||||||||    
T  5148 --cacgtagaggcaacattcaaacagaatgggtgagatttcacat 5106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 65 - 188
Target Start/End: Complemental strand, 10538 - 10413
Alignment:
Q  65 tcaacataaaatcatatcaattacgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacg---cgtgagaga 161  Q
    |||||||||||||||   || |||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||   |||||||||    
T  10538 tcaacataaaatcatgataaatacgtaacacatggaaaacaagcaa-atccccatcccgttacatatcagagcgaccctaagacgacgacacgtgagaga 10440  T
Q  162 gtcaattcacttcaacagctattcttg 188  Q
    ||||  |||||||||||||||||||||    
T  10439 gtcatctcacttcaacagctattcttg 10413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 130 - 242
Target Start/End: Original strand, 18360 - 18472
Alignment:
Q  130 atcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagaggcaacattccaccag 229  Q
    ||||||||||||||||||||||||||||||||||||| ||||  ||||||||| || |||||| |||| ||||||||||||||||||||||||| | |||    
T  18360 atcagagcgaccctaagacgacgcgtgagagagtcaactcacaacaacagctaatcctggttatctgcacgttacccacgtagaggcaacattcaaacag 18459  T
Q  230 aaggggtgagatt 242  Q
    ||| |||||||||    
T  18460 aagaggtgagatt 18472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 72; Significance: 8e-33; HSPs: 3)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 113 - 248
Target Start/End: Original strand, 3464 - 3599
Alignment:
Q  113 tccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtag 212  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||||||||||| | || |||  ||| | || |||||| |||| || |||||||||||    
T  3464 tccccatcccattacgtatcagagcgaccctaagacgacgtgtgagagagtcaactgacatcagtagcaaatcctggttatctgcacgctacccacgtag 3563  T
Q  213 aggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||| | ||||||||||| ||||||||||    
T  3564 aggcaacattcaaacagaaggggtgcgatttcacat 3599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 113 - 248
Target Start/End: Original strand, 9586 - 9721
Alignment:
Q  113 tccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtag 212  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||||||||||| | || |||  ||| | || |||||| |||| || |||||||||||    
T  9586 tccccatcccattacgtatcagagcgaccctaagacgacgtgtgagagagtcaactgacatcagtagcaaatcctggttatctgcacgctacccacgtag 9685  T
Q  213 aggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||| | ||||||||||| ||||||||||    
T  9686 aggcaacattcaaacagaaggggtgcgatttcacat 9721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 113 - 248
Target Start/End: Original strand, 14565 - 14698
Alignment:
Q  113 tccccatcccgttacgtatcagagcgac-cctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgta 211  Q
    |||||||||||||||||||||||||||| ||||||||||| || |   || |||| |||| ||| |||||| || |||||| |||| |||||||||||||    
T  14565 tccccatcccgttacgtatcagagcgactcctaagacgacacgag---gaatcaactcacatcagcagctaatcctggttatctgcacgttacccacgta 14661  T
Q  212 gaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||||||||| | |||||||| |||||||||||||    
T  14662 gaggcaacattcaaacagaagggctgagatttcacat 14698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 71; Significance: 3e-32; HSPs: 4)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 65 - 248
Target Start/End: Original strand, 31280 - 31469
Alignment:
Q  65 tcaacataaaatcatatcaattacgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacg---cgtgagaga 161  Q
    |||||||||||||||   || |||||||||||||||||||||| || ||||||||| ||||||||||||||| |||||||||||||||   |||||||||    
T  31280 tcaacataaaatcatgataaatacgtaacacatggaaaacaagcaa-atccccatctcgttacgtatcagagagaccctaagacgacgacacgtgagaga 31378  T
Q  162 gtcaattcacttcaacagctattcttggttacctgcgcgttaccca--cgtagaggcaacatt--ccaccagaaggggtgagatttcacat 248  Q
    ||||  |||||||||||| |||||||| || |||||  ||||||||   ||| ||||||||||  | |  |||||||||||||||||||||    
T  31379 gtcatctcacttcaacagttattcttgatttcctgcaagttacccaattgtaaaggcaacatttccaagtagaaggggtgagatttcacat 31469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 65 - 248
Target Start/End: Original strand, 36587 - 36776
Alignment:
Q  65 tcaacataaaatcatatcaattacgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacg---cgtgagaga 161  Q
    |||||||||||||||   || |||||||||||||||||||||| || ||||||||| ||||||||||||||| |||||||||||||||   |||||||||    
T  36587 tcaacataaaatcatgataaatacgtaacacatggaaaacaagcaa-atccccatctcgttacgtatcagagagaccctaagacgacgacacgtgagaga 36685  T
Q  162 gtcaattcacttcaacagctattcttggttacctgcgcgttaccca--cgtagaggcaacatt--ccaccagaaggggtgagatttcacat 248  Q
    ||||  |||||||||||| |||||||| || |||||  ||||||||   ||| ||||||||||  | |  |||||||||||||||||||||    
T  36686 gtcatctcacttcaacagttattcttgatttcctgcaagttacccaattgtaaaggcaacatttccaagtagaaggggtgagatttcacat 36776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 115 - 247
Target Start/End: Original strand, 443201 - 443332
Alignment:
Q  115 cccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagag 214  Q
    |||||||||||| ||||||||||   |||||||| || ||||||||| || | ||||  | ||| ||||||||||||||||||   ||||||||||||||    
T  443201 cccatcccgttatgtatcagagca--cctaagac-acacgtgagagaatccactcacgaccacaactattcttggttacctgcaaattacccacgtagag 443297  T
Q  215 gcaacatt--ccaccagaaggggtgagatttcaca 247  Q
    ||||||||  | | |||||||||||||||||||||    
T  443298 gcaacatttccaagcagaaggggtgagatttcaca 443332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 137
Target Start/End: Original strand, 391301 - 391350
Alignment:
Q  88 cgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagc 137  Q
    ||||||| |||||||||||  |||||||||||||||||| |||| |||||    
T  391301 cgtaacatatggaaaacaataaagatccccatcccgttaagtattagagc 391350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 69; Significance: 5e-31; HSPs: 2)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 24003 - 24248
Alignment:
Q  1 aacatcgtaatggcacaatggcctcaacatagacaacttattaaaa-tccaatctagatggttcatcaacataaaatcatatcaattacgtaacacatgg 99  Q
    |||| |||||||| |||| |||||||||||| ||||||| |||||| |||| ||||| |||||||||||||| ||||||||  || ||||||||||||||    
T  24003 aacagcgtaatggaacaacggcctcaacataaacaacttgttaaaattccattctaggtggttcatcaacat-aaatcata-aaaatacgtaacacatgg 24100  T
Q  100 aaaac-aagtaagatccccatcccgttacgtatcagagcgac-cctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgc 197  Q
    ||||| ||| |||||| ||||||  |||| |||||||||||| ||||||| ||| |   |  || |||| |||| |||| || || || |||||| ||||    
T  24101 aaaacaaagcaagatctccatccgattacatatcagagcgactcctaagaggacac---aaggaatcaactcacatcaatagttactcctggttatctgc 24197  T
Q  198 gcgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
      |||||||||||||||||||||||| | ||||| |||||| |||||||||    
T  24198 atgttacccacgtagaggcaacattcaaacagaatgggtgaaatttcacat 24248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 248
Target Start/End: Complemental strand, 43961 - 43907
Alignment:
Q  194 ctgcgcgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||| ||||||||||||||||| ||||||| | |||||| |||||||||||||||    
T  43961 ctgcacgttacccacgtagaggtaacattcaaacagaagaggtgagatttcacat 43907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 65 - 248
Target Start/End: Complemental strand, 10146 - 9957
Alignment:
Q  65 tcaacataaaatcatatcaattacgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacg---cgtgagaga 161  Q
    |||||||||||||||   || ||| |||||||||||||||||| || | ||||||||||||||||||||||||| |||||||||||||   |||||||||    
T  10146 tcaacataaaatcatgataaatacataacacatggaaaacaagcaa-agccccatcccgttacgtatcagagcggccctaagacgacgacacgtgagaga 10048  T
Q  162 gtcaattcacttcaacagctattcttggttacctgcgcgttaccca--cgtagaggcaacatt--ccaccagaaggggtgagatttcacat 248  Q
    ||||  ||||||||||| ||||||||| || |||||  ||||||||   ||| ||||||||||  | | |||||| |||||||||||||||    
T  10047 gtcatctcacttcaacatctattcttgatttcctgcaagttacccaattgtaaaggcaacatttccaagcagaagtggtgagatttcacat 9957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 117 - 248
Target Start/End: Original strand, 15381 - 15509
Alignment:
Q  117 catcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagaggc 216  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||   |||||| |||||| || | |||||||||| ||||||     
T  15381 catcctgttacgtatcagaacgaccctaagacgacgcgtgagagagtcaactcacttcaa---ctattcatggttatctacacgttacccacatagaggt 15477  T
Q  217 aacattccaccagaaggggtgagatttcacat 248  Q
    ||| ||| | || |||||||||||||||||||    
T  15478 aacgttcaaacacaaggggtgagatttcacat 15509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 53 - 184
Target Start/End: Complemental strand, 17213 - 17084
Alignment:
Q  53 ctagatggttcatcaacataaaatcatatcaattacgtaacacatggaaaacaa-gtaagatccccatcccgttacgtatcagagcgaccctaagacgac 151  Q
    |||| ||||||||||||||||  |||||  ||| |||||||||||||||||||| | ||||||| ||||||||||||||||||||| ||| ||||| |||    
T  17213 ctaggtggttcatcaacataa--tcataaaaat-acgtaacacatggaaaacaaagcaagatcctcatcccgttacgtatcagagcaaccttaagatgac 17117  T
Q  152 gcgtgagagagtcaattcacttcaacagctatt 184  Q
    ||||||||||||||| |||| ||  ||||||||    
T  17116 gcgtgagagagtcaactcacatccgcagctatt 17084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 180 - 245
Target Start/End: Complemental strand, 8342 - 8277
Alignment:
Q  180 ctattcttggttacctgcgcgttacccacgtagaggcaacattccaccagaaggggtgagatttca 245  Q
    |||||| | |||| |||| ||||||||||||||||||||||||| | |||||||||||||||||||    
T  8342 ctattcctagttatctgcacgttacccacgtagaggcaacattcaaacagaaggggtgagatttca 8277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 65 - 196
Target Start/End: Original strand, 6714 - 6845
Alignment:
Q  65 tcaacataaaatcatatcaattacgtaacacatggaaaacaagtaagat-ccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagt 163  Q
    |||||||||| |||||  ||  ||||||||||||||||||||  || || |||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  6714 tcaacataaattcataagaaacacgtaacacatggaaaacaaacaaaattccccatcccgttacgtatcagagcaaccctaagacgacacgtgagagagt 6813  T
Q  164 caattcacttcaacagctattcttggttacctg 196  Q
    | | ||||||||||| |||  |||| |||||||    
T  6814 c-actcacttcaacaactaaccttgattacctg 6845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 57; Significance: 7e-24; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 83 - 207
Target Start/End: Complemental strand, 42015 - 41894
Alignment:
Q  83 aattacgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagcta 182  Q
    |||||||||||  |||||||||||  ||||||||||||||||||||||||||||||||||| |||| || |||||| ||||| | ||||||||||| |||    
T  42015 aattacgtaacttatggaaaacaataaagatccccatcccgttacgtatcagagcgaccct-agacaacacgtgag-gagtc-actcacttcaacaacta 41919  T
Q  183 ttcttggttacctgcgcgttaccca 207  Q
    |||||| ||||||||  ||||||||    
T  41918 ttcttgattacctgcaagttaccca 41894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 112 - 248
Target Start/End: Original strand, 22844 - 22980
Alignment:
Q  112 atccccatcccgttacgtatcagagc--gac-cctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccac 208  Q
    ||||||||||||||||||||||||||  ||| |||| |||||| || |   || |||| |||| ||| | | || || |||||| |||| || |||||||    
T  22844 atccccatcccgttacgtatcagagcatgactcctatgacgacacgag---gaatcaactcacatcagcggttactcctggttatctgcacgatacccac 22940  T
Q  209 gtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  22941 gtagaggcaacattcaaacagaaggggtgagatttcacat 22980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 158
Target Start/End: Original strand, 6851 - 6999
Alignment:
Q  11 tggcacaatggcctcaacatagacaacttattaaaa-tccaatctagatggttcatcaacataaaa-tcata-tcaattacgtaacacatggaaaacaag 107  Q
    |||||||| ||||||||| || |||||||| ||||| ||||||||| || || | ||||||||||| ||||| | ||| |||||||| |||||||||||     
T  6851 tggcacaacggcctcaacttaaacaacttaataaaaatccaatctaaatagt-cttcaacataaaagtcataataaatcacgtaacatatggaaaacaat 6949  T
Q  108 taagatccccatcccgttacgtatcagagcgaccctaagacgacgcgtgag 158  Q
     |||||||| |||||||||||||||||||||||||| ||||||| ||||||    
T  6950 aaagatcccgatcccgttacgtatcagagcgaccct-agacgacacgtgag 6999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 112 - 248
Target Start/End: Complemental strand, 8795 - 8660
Alignment:
Q  112 atccccatcccgttacgtatcagagcgac-cctaagacgacgcgtgagagagtcaattcacttcaacagct-attcttggttacctgcgcgttacccacg 209  Q
    ||||||||||||||||||||||||||||| ||||||||||| || |   || |||| |||| ||| | | | | || |||||| |||| |||||||||||    
T  8795 atccccatcccgttacgtatcagagcgactcctaagacgacacgag---gaatcaactcacatcagcggtttactcctggttatctgcacgttacccacg 8699  T
Q  210 tagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||||||||||| | ||||||||||||||||||||||    
T  8698 tagaggcaacattcaaacagaaggggtgagatttcacat 8660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 112 - 245
Target Start/End: Complemental strand, 45053 - 44922
Alignment:
Q  112 atccccatcccgttacgtatcagagcgac-cctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgt 210  Q
    |||||||||| |||||||||||||||||| ||||||||||| || |   || |||| |||| ||| | | || || |||||| |||| ||||||||||||    
T  45053 atccccatcctgttacgtatcagagcgactcctaagacgacacgag---gaatcaactcacatcagcggttactcctggttatctgcacgttacccacgt 44957  T
Q  211 agaggcaacattccaccagaaggggtgagatttca 245  Q
    ||||||||||||| | |||||||||||||||||||    
T  44956 agaggcaacattcaaacagaaggggtgagatttca 44922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 112 - 248
Target Start/End: Complemental strand, 40473 - 40339
Alignment:
Q  112 atccccatcccgttacgtatcagagcgac-cctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgt 210  Q
    ||||||||||||||||||||||||| ||| ||||||||||| || |   || | || |||| ||| |  ||| || |||||| |||| ||||||||||||    
T  40473 atccccatcccgttacgtatcagagtgactcctaagacgacacgag---gaataaactcacatcagcgactactcctggttatctgcacgttacccacgt 40377  T
Q  211 agaggcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||||||| | ||||||||||||||||||||||    
T  40376 agaggcaacattcaaacagaaggggtgagatttcacat 40339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 117 - 207
Target Start/End: Original strand, 15116 - 15205
Alignment:
Q  117 catcccgttacgtatcagagcgaccctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttaccca 207  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||  ||| ||||| ||||||||  ||||||||    
T  15116 catcccgttacgtatcagagcgaccctaagacgacacgtgagagagtc-actcacttcaactactaatcttgattacctgcaagttaccca 15205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 113 - 248
Target Start/End: Original strand, 7623 - 7756
Alignment:
Q  113 tccccatcccgttacgtatcagagcgac-cctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgta 211  Q
    ||||||| |||||||||||||||||||| ||||||||||| || |   || |||| |||| ||| | | || || |||||| |||| ||||||||||||     
T  7623 tccccattccgttacgtatcagagcgactcctaagacgacacgag---gaatcaactcacatcagcggttactcctggttatctgcacgttacccacgtt 7719  T
Q  212 gaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||||||||| | ||||||||||||||||||||||    
T  7720 gaggcaacattcaaacagaaggggtgagatttcacat 7756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1815 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold1815
Description:

Target: scaffold1815; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 117 - 207
Target Start/End: Original strand, 292 - 385
Alignment:
Q  117 catcccgttacgtatcagagcgaccctaagacgacg---cgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttaccca 207  Q
    |||||||||||||||||||||||||||||||| |||   |||| ||||||||| |||||||||| |||| ||||| ||||||||  ||||||||    
T  292 catcccgttacgtatcagagcgaccctaagaccacgatacgtgtgagagtcaactcacttcaacggctaatcttgattacctgcaagttaccca 385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 116 - 248
Target Start/End: Complemental strand, 7090 - 6960
Alignment:
Q  116 ccatcccgttacgtatcagagcgac-cctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagag 214  Q
    |||||||||||||||||| |||||| |||||||||||   |||| || |||| |||| ||| | | || |  |||||| |||| ||||||||||||||||    
T  7090 ccatcccgttacgtatcaaagcgactcctaagacgaca--tgag-gaatcaactcacatcagcggttactactggttatctgcacgttacccacgtagag 6994  T
Q  215 gcaacattccaccagaaggggtgagatttcacat 248  Q
    ||||||||| | ||||||||||||||||||||||    
T  6993 gcaacattcaaacagaaggggtgagatttcacat 6960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 187 - 248
Target Start/End: Original strand, 18772 - 18833
Alignment:
Q  187 tggttacctgcgcgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||| |||| ||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  18772 tggttatctgcacgttacccacgtagaggcaacattcaaacagaaggggtgagatttcacat 18833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 194 - 248
Target Start/End: Complemental strand, 39076 - 39022
Alignment:
Q  194 ctgcgcgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||| ||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  39076 ctgcacgttacccacgtagaggcaacattcaaacagaaggggtgagatttcacat 39022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 187 - 248
Target Start/End: Complemental strand, 61040 - 60979
Alignment:
Q  187 tggttacctgcgcgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||| |||| ||||||||||||||||| ||||||| | ||||||||||||||||||||||    
T  61040 tggttatctgcacgttacccacgtagaggtaacattcaaacagaaggggtgagatttcacat 60979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 248
Target Start/End: Complemental strand, 54010 - 53915
Alignment:
Q  155 tgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgtagaggcaacattcc--accagaaggggtgagatttcacat 248  Q
    |||||||||| | ||||||||||| ||| ||||| ||||||||  ||||| ||||||||||||||||| |  |  |||||||||||||||||||||    
T  54010 tgagagagtcgagtcacttcaacaactaatcttgattacctgcaagttacacacgtagaggcaacatttccaagtagaaggggtgagatttcacat 53915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 47448 - 47498
Alignment:
Q  87 acgtaacacatggaaaacaagtaagatccccatcccgttacgtatcagagc 137  Q
    ||||||||||||||||||||  |||||||||||||||||| ||||||||||    
T  47448 acgtaacacatggaaaacaataaagatccccatcccgttatgtatcagagc 47498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 248
Target Start/End: Original strand, 27468 - 27529
Alignment:
Q  187 tggttacctgcgcgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||| |||| |||||||||||||||||||||||||   ||||||| ||||||||||||||    
T  27468 tggttatctgcacgttacccacgtagaggcaacattcatacagaaggagtgagatttcacat 27529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 117 - 164
Target Start/End: Original strand, 10172 - 10222
Alignment:
Q  117 catcccgttacgtatcagagcgaccctaagacgacg---cgtgagagagtc 164  Q
    ||||||||||||||||||||||||||||||||||||   ||||||||||||    
T  10172 catcccgttacgtatcagagcgaccctaagacgacgacacgtgagagagtc 10222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 175
Target Start/End: Complemental strand, 9723 - 9662
Alignment:
Q  117 catcccgttacgtatcagagcgaccctaagacg---acgcgtgagagagtcaattcacttca 175  Q
    |||||||||||||||||||||||||||||||||   || |||||||||||| | ||||||||    
T  9723 catcccgttacgtatcagagcgaccctaagacgaatacacgtgagagagtcgactcacttca 9662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 195
Target Start/End: Original strand, 1013 - 1094
Alignment:
Q  117 catcccgttacgtatcagagcgaccctaagacgacgc---gtgagagagtcaattcacttcaacagctattcttggttacct 195  Q
    |||| |||||||||||||||||||||||||| || |    ||||||||||||| |||||||||||||||  |||| ||||||    
T  1013 catctcgttacgtatcagagcgaccctaagatgatgacatgtgagagagtcaactcacttcaacagctaaccttgattacct 1094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 195
Target Start/End: Original strand, 7179 - 7260
Alignment:
Q  117 catcccgttacgtatcagagcgaccctaagacgacgc---gtgagagagtcaattcacttcaacagctattcttggttacct 195  Q
    |||| |||||||||||||||||||||||||| || |    ||||||||||||| |||||||||||||||  |||| ||||||    
T  7179 catctcgttacgtatcagagcgaccctaagatgatgacatgtgagagagtcaactcacttcaacagctaaccttgattacct 7260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1716 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1716
Description:

Target: scaffold1716; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 113 - 248
Target Start/End: Original strand, 1111 - 1246
Alignment:
Q  113 tccccatcccgttacgtatcagagcgac-cctaagacgacgcgtgagagagtcaattcacttcaacagctattcttggttacctgcgcgttacccacgta 211  Q
    |||||||| |||||| |||||||||||| ||||||||||| || |   || |||| |||  ||| | | || || |||||| |||| ||||| |||||||    
T  1111 tccccatctcgttacatatcagagcgactcctaagacgacacgag---gaatcaactcatatcagcggttactcctggttatctgcacgttaaccacgta 1207  T
Q  212 gaggcaacattccaccagaa--ggggtgagatttcacat 248  Q
    |||||||||||| | |||||  |||||||||||||||||    
T  1208 gaggcaacattcaaacagaagtggggtgagatttcacat 1246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 248
Target Start/End: Original strand, 9135 - 9196
Alignment:
Q  187 tggttacctgcgcgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||| |||| ||||||||| | ||||||||||||| |  |||||||||||||||||||||    
T  9135 tggttatctgcacgttacccatgcagaggcaacattcaaagagaaggggtgagatttcacat 9196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 248
Target Start/End: Original strand, 16327 - 16388
Alignment:
Q  187 tggttacctgcgcgttacccacgtagaggcaacattccaccagaaggggtgagatttcacat 248  Q
    |||||| |||| ||||||||| | ||||||||||||| |  |||||||||||||||||||||    
T  16327 tggttatctgcacgttacccatgcagaggcaacattcaaagagaaggggtgagatttcacat 16388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 127
Target Start/End: Complemental strand, 69331 - 69270
Alignment:
Q  65 tcaacataaaatcatatcaattacgtaacacatggaaaacaagtaagatccccatcccgttac 127  Q
    |||||||||||||||   || |||| ||||||||||||||||| || ||||||||||||||||    
T  69331 tcaacataaaatcatgataaatacgcaacacatggaaaacaagcaa-atccccatcccgttac 69270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 33718 - 33747
Alignment:
Q  112 atccccatcccgttacgtatcagagcgacc 141  Q
    ||||||||||||||||||||||||||||||    
T  33718 atccccatcccgttacgtatcagagcgacc 33747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 137
Target Start/End: Original strand, 145316 - 145344
Alignment:
Q  109 aagatccccatcccgttacgtatcagagc 137  Q
    |||||||||||||||||||||||||||||    
T  145316 aagatccccatcccgttacgtatcagagc 145344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 55
Target Start/End: Complemental strand, 171339 - 171295
Alignment:
Q  11 tggcacaatggcctcaacatagacaacttattaaaatccaatcta 55  Q
    |||||||||||||||||  || |||||||||||||||||| ||||    
T  171339 tggcacaatggcctcaaattaaacaacttattaaaatccagtcta 171295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University