View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19382_high_74 (Length: 255)
Name: NF19382_high_74
Description: NF19382
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19382_high_74 |
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Alignment Details
Target: chr6 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 3236034 - 3236274
Alignment:
| Q |
1 |
ttgatttttctcaaaatgaactatgatactaaacaacatggaaattttaacaccttgctctatttgatttctttcattccctaggtccttaatattgagg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3236034 |
ttgatttttctcaaaatgaactatgatactaaacaacatggaaattttaacaccttgctctatttgatttctttcattccctaggtccttaatattgagg |
3236133 |
T |
|
| Q |
101 |
ctatgcatatggtttttactattaacattgccaaactaatgccaaaatccatttttccttgcataaatttcacattattgagccttaggttaatgttaag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3236134 |
ctatgcatatggtttttactattaacattgccaaactaatgccaaaatccatttttccttgcataaatttcacattattgagccttaggttaatgttaag |
3236233 |
T |
|
| Q |
201 |
caattggtgtttcttctctctcagaatttatctcactatac |
241 |
Q |
| |
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||||||||||||||||||||||||||||||||||||||||| |
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| T |
3236234 |
caattggtgtttcttctctctcagaatttatctcactatac |
3236274 |
T |
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