View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19382_low_31 (Length: 441)
Name: NF19382_low_31
Description: NF19382
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19382_low_31 |
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Alignment Details
Target: chr7 (Bit Score: 351; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 351; E-Value: 0
Query Start/End: Original strand, 27 - 426
Target Start/End: Complemental strand, 37195128 - 37194713
Alignment:
| Q |
27 |
gttcgatcaaaaattgttttactaaagatttatactcaatttatatcaaatgatttgattttaactgatattcaatcaattgatacatcaaattgtaatt |
126 |
Q |
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| T |
37195128 |
gttcgatcaaaaattgttttactaaagatttatactcaatttatatcaaatgatttgattttaactgatattcaatcacttgatacatcaaattgtaatt |
37195029 |
T |
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| Q |
127 |
tgagagatgagaattatagtcacaagatcgaaattgtatcgacacaatttgaatgcttctcacaaatgacatcttctatattaacgagtgcaaaaattac |
226 |
Q |
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| T |
37195028 |
tgagagatgagaattatagtcacaagatcgaaattgtatcgacacaatttgaatgcttctcacaaatgacatcttctatattaacgagtgcaaaaattac |
37194929 |
T |
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| Q |
227 |
aatttatagtccaga----------------actatctggaatttatttaacgagtttaaaaattacaatttatttaaaataaattaagcaataacaagg |
310 |
Q |
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| T |
37194928 |
aatttatagtcgagattataaattttttatcactatctggaatttatttaacgagtttaaaaattacagtttatttaaaataaattaagcaataacaagg |
37194829 |
T |
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| Q |
311 |
cttagtatattattccttacacaaaatagtcgtatatattatccacagtttctcacgaaacacaattacaatgtatctataatattttcattaagattta |
410 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37194828 |
cttagtatattattccttacacaaaatagtcgtatatattatccacagtttctcacgaaacacaattacaatgtatctataatattttcattaagattta |
37194729 |
T |
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| Q |
411 |
tatttcacttagaatt |
426 |
Q |
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| T |
37194728 |
tatttcacttagaatt |
37194713 |
T |
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