View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19382_low_5 (Length: 662)

Name: NF19382_low_5
Description: NF19382
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19382_low_5
NF19382_low_5
[»] scaffold0003 (2 HSPs)
scaffold0003 (307-646)||(48184-48520)
scaffold0003 (316-378)||(47131-47193)
[»] chr6 (32 HSPs)
chr6 (307-646)||(27438842-27439178)
chr6 (320-514)||(13800096-13800287)
chr6 (307-381)||(33807741-33807815)
chr6 (307-379)||(22299895-22299967)
chr6 (316-378)||(27440168-27440230)
chr6 (307-372)||(8412315-8412380)
chr6 (468-566)||(9928392-9928506)
chr6 (307-379)||(8411138-8411210)
chr6 (307-381)||(31740262-31740336)
chr6 (532-575)||(13800346-13800389)
chr6 (307-378)||(31738415-31738486)
chr6 (307-378)||(33802010-33802081)
chr6 (42-108)||(12194463-12194529)
chr6 (307-378)||(9927658-9927728)
chr6 (307-378)||(18139480-18139551)
chr6 (312-378)||(293633-293699)
chr6 (307-364)||(5311331-5311388)
chr6 (313-378)||(14328767-14328832)
chr6 (313-378)||(14421777-14421842)
chr6 (24-91)||(9352179-9352246)
chr6 (42-105)||(9440257-9440320)
chr6 (24-91)||(13492449-13492516)
chr6 (24-107)||(28780227-28780310)
chr6 (307-372)||(8447273-8447338)
chr6 (307-372)||(8456077-8456142)
chr6 (518-562)||(13800307-13800352)
chr6 (42-91)||(17027493-17027542)
chr6 (601-637)||(9928179-9928215)
chr6 (317-373)||(14326215-14326271)
chr6 (317-373)||(14419225-14419281)
chr6 (402-450)||(29675624-29675672)
chr6 (312-352)||(34084153-34084193)
[»] chr5 (48 HSPs)
chr5 (312-562)||(38473364-38473614)
chr5 (307-379)||(15613557-15613629)
chr5 (307-428)||(5384289-5384410)
chr5 (307-378)||(42510166-42510237)
chr5 (307-425)||(1273141-1273259)
chr5 (313-378)||(12830931-12830996)
chr5 (313-378)||(12862911-12862976)
chr5 (307-379)||(22812379-22812451)
chr5 (307-374)||(1663239-1663306)
chr5 (307-378)||(42979500-42979571)
chr5 (307-372)||(15614959-15615024)
chr5 (307-372)||(26404209-26404274)
chr5 (312-372)||(10085844-10085904)
chr5 (307-379)||(42980701-42980773)
chr5 (307-378)||(12933803-12933874)
chr5 (307-378)||(21387689-21387760)
chr5 (594-637)||(38473273-38473316)
chr5 (312-378)||(5382999-5383065)
chr5 (307-381)||(15857608-15857682)
chr5 (313-363)||(22819557-22819607)
chr5 (307-371)||(19525288-19525352)
chr5 (313-373)||(24761719-24761779)
chr5 (24-91)||(189185-189252)
chr5 (307-362)||(18678028-18678083)
chr5 (307-378)||(18693750-18693821)
chr5 (314-381)||(21389133-21389200)
chr5 (307-374)||(26403359-26403426)
chr5 (307-381)||(18695637-18695711)
chr5 (312-362)||(19827149-19827199)
chr5 (324-378)||(22819510-22819564)
chr5 (320-378)||(38471354-38471412)
chr5 (313-362)||(2167523-2167572)
chr5 (307-372)||(15509247-15509312)
chr5 (307-372)||(15510262-15510327)
chr5 (322-427)||(32735423-32735528)
chr5 (307-360)||(42511677-42511730)
chr5 (307-379)||(8762392-8762464)
chr5 (24-84)||(42788615-42788675)
chr5 (24-91)||(2193933-2194000)
chr5 (24-91)||(2474076-2474143)
chr5 (307-366)||(7345395-7345454)
chr5 (24-91)||(8641996-8642063)
chr5 (332-379)||(10084675-10084722)
chr5 (307-378)||(12947964-12948035)
chr5 (24-105)||(18304548-18304629)
chr5 (307-372)||(22650627-22650692)
chr5 (24-105)||(34371729-34371810)
chr5 (313-378)||(40058076-40058141)
[»] chr4 (60 HSPs)
chr4 (18-216)||(23091341-23091540)
chr4 (307-372)||(33377363-33377428)
chr4 (312-379)||(33376275-33376342)
chr4 (307-381)||(44304969-44305043)
chr4 (307-378)||(34438458-34438529)
chr4 (307-378)||(44302772-44302843)
chr4 (307-446)||(46795951-46796090)
chr4 (307-449)||(15787425-15787566)
chr4 (307-372)||(5687227-5687292)
chr4 (307-378)||(30683020-30683091)
chr4 (307-433)||(11113794-11113920)
chr4 (312-378)||(15446663-15446729)
chr4 (318-372)||(26788585-26788639)
chr4 (307-377)||(34439654-34439724)
chr4 (318-378)||(86866-86926)
chr4 (307-378)||(11094578-11094649)
chr4 (307-378)||(35787848-35787919)
chr4 (307-381)||(28103476-28103550)
chr4 (307-372)||(1273432-1273497)
chr4 (307-372)||(5688636-5688701)
chr4 (307-428)||(27408815-27408936)
chr4 (307-372)||(37560298-37560363)
chr4 (313-454)||(38417611-38417752)
chr4 (307-372)||(44128333-44128398)
chr4 (307-372)||(55953851-55953916)
chr4 (307-378)||(11114973-11115044)
chr4 (37-108)||(13266216-13266287)
chr4 (307-378)||(17319094-17319165)
chr4 (24-91)||(44471281-44471348)
chr4 (307-446)||(47667230-47667369)
chr4 (24-91)||(50814781-50814848)
chr4 (307-381)||(307795-307869)
chr4 (312-378)||(31712499-31712565)
chr4 (24-105)||(12691941-12692022)
chr4 (307-368)||(27410686-27410746)
chr4 (313-378)||(38419010-38419075)
chr4 (307-372)||(53400237-53400302)
chr4 (312-372)||(3217608-3217668)
chr4 (307-399)||(29686308-29686400)
chr4 (307-379)||(40146615-40146687)
chr4 (24-91)||(7678578-7678645)
chr4 (307-378)||(15787004-15787075)
chr4 (24-91)||(35871744-35871811)
chr4 (307-378)||(39592282-39592353)
chr4 (307-378)||(47668590-47668661)
chr4 (151-193)||(24629291-24629333)
chr4 (313-427)||(50531700-50531814)
chr4 (307-380)||(10403408-10403481)
chr4 (42-91)||(24628933-24628982)
chr4 (307-352)||(26393146-26393191)
chr4 (307-352)||(29663694-29663739)
chr4 (307-372)||(37559050-37559115)
chr4 (313-378)||(44159143-44159208)
chr4 (42-91)||(44470831-44470880)
chr4 (307-371)||(21104310-21104374)
chr4 (312-364)||(26121927-26121979)
chr4 (402-450)||(26631137-26631185)
chr4 (316-372)||(29833433-29833489)
chr4 (341-449)||(39591027-39591135)
chr4 (406-454)||(49895195-49895243)
[»] chr1 (59 HSPs)
chr1 (320-493)||(14171148-14171319)
chr1 (307-379)||(13641309-13641381)
chr1 (307-373)||(3978096-3978162)
chr1 (307-372)||(3979312-3979377)
chr1 (307-377)||(36511325-36511395)
chr1 (307-372)||(26056146-26056211)
chr1 (307-379)||(47560191-47560263)
chr1 (307-378)||(19466198-19466269)
chr1 (307-378)||(21277046-21277117)
chr1 (307-378)||(36509863-36509934)
chr1 (307-381)||(9592290-9592364)
chr1 (307-372)||(25787163-25787228)
chr1 (307-372)||(47136686-47136751)
chr1 (307-372)||(47411447-47411512)
chr1 (307-450)||(26054949-26055092)
chr1 (307-378)||(51726837-51726908)
chr1 (316-378)||(40811256-40811318)
chr1 (307-381)||(49139853-49139927)
chr1 (307-381)||(50679811-50679885)
chr1 (313-378)||(22167837-22167902)
chr1 (307-372)||(25786020-25786085)
chr1 (307-372)||(35683107-35683172)
chr1 (307-372)||(47411036-47411101)
chr1 (307-371)||(14071203-14071267)
chr1 (307-381)||(13929347-13929421)
chr1 (307-381)||(51725395-51725469)
chr1 (307-372)||(2237977-2238042)
chr1 (307-372)||(14390310-14390375)
chr1 (307-372)||(16217492-16217557)
chr1 (307-372)||(16218477-16218542)
chr1 (307-372)||(48935109-48935174)
chr1 (307-447)||(52741540-52741681)
chr1 (307-371)||(13930675-13930739)
chr1 (312-368)||(19464657-19464713)
chr1 (24-193)||(20054397-20054565)
chr1 (24-193)||(20054853-20055021)
chr1 (24-193)||(20055309-20055477)
chr1 (24-193)||(20055765-20055933)
chr1 (24-193)||(20056221-20056389)
chr1 (24-193)||(20057124-20057292)
chr1 (24-193)||(20057580-20057748)
chr1 (24-193)||(38341023-38341191)
chr1 (307-379)||(52181297-52181369)
chr1 (307-362)||(14169671-14169726)
chr1 (313-372)||(14765093-14765152)
chr1 (24-91)||(52250660-52250727)
chr1 (24-91)||(52250997-52251064)
chr1 (43-97)||(8278093-8278147)
chr1 (307-372)||(2236865-2236930)
chr1 (42-91)||(16451895-16451944)
chr1 (42-91)||(16461048-16461097)
chr1 (307-372)||(42248304-42248369)
chr1 (42-91)||(46693697-46693746)
chr1 (307-372)||(48973250-48973315)
chr1 (406-454)||(6048071-6048119)
chr1 (402-450)||(19194816-19194864)
chr1 (338-454)||(34654257-34654373)
chr1 (316-372)||(35684202-35684258)
chr1 (356-424)||(44978613-44978681)
[»] chr2 (39 HSPs)
chr2 (320-509)||(25569834-25570021)
chr2 (307-378)||(23177726-23177797)
chr2 (307-378)||(23588983-23589054)
chr2 (307-381)||(6706978-6707052)
chr2 (307-379)||(1624968-1625040)
chr2 (307-378)||(14509261-14509332)
chr2 (532-575)||(25570084-25570127)
chr2 (307-372)||(2581855-2581920)
chr2 (307-372)||(12852938-12853003)
chr2 (314-381)||(40174754-40174821)
chr2 (307-372)||(2305592-2305657)
chr2 (307-372)||(4829517-4829582)
chr2 (307-372)||(42027245-42027310)
chr2 (24-108)||(8256643-8256727)
chr2 (307-379)||(35801037-35801109)
chr2 (307-378)||(7037018-7037089)
chr2 (312-371)||(12959705-12959764)
chr2 (24-91)||(41754406-41754473)
chr2 (312-379)||(42246648-42246715)
chr2 (307-381)||(10368375-10368449)
chr2 (42-91)||(33771136-33771185)
chr2 (312-372)||(2306660-2306720)
chr2 (313-373)||(14510507-14510567)
chr2 (24-84)||(32377685-32377745)
chr2 (24-91)||(11388304-11388371)
chr2 (307-361)||(11386676-11386730)
chr2 (307-345)||(12854130-12854168)
chr2 (524-562)||(25570052-25570090)
chr2 (312-378)||(28109862-28109928)
chr2 (307-372)||(15650493-15650558)
chr2 (42-91)||(25337959-25338008)
chr2 (307-372)||(29424611-29424676)
chr2 (24-85)||(29804799-29804860)
chr2 (307-372)||(35799564-35799629)
chr2 (312-372)||(4628939-4628999)
chr2 (307-371)||(10367291-10367355)
chr2 (329-381)||(23178872-23178924)
chr2 (329-381)||(23590129-23590181)
chr2 (307-371)||(37869040-37869104)
[»] chr8 (51 HSPs)
chr8 (307-381)||(37274939-37275013)
chr8 (307-453)||(36939951-36940097)
chr8 (307-372)||(36070230-36070295)
chr8 (312-372)||(31625383-31625443)
chr8 (307-378)||(13367043-13367114)
chr8 (307-372)||(16363811-16363876)
chr8 (307-368)||(38591010-38591071)
chr8 (320-378)||(117113-117171)
chr8 (307-381)||(24068382-24068456)
chr8 (307-424)||(10053691-10053808)
chr8 (24-190)||(22548859-22549024)
chr8 (317-433)||(39323849-39323965)
chr8 (307-378)||(7486129-7486200)
chr8 (307-370)||(24069447-24069510)
chr8 (307-378)||(37276236-37276307)
chr8 (316-378)||(35943969-35944031)
chr8 (312-378)||(39546670-39546736)
chr8 (307-371)||(29738343-29738407)
chr8 (307-378)||(19913544-19913615)
chr8 (307-425)||(19914852-19914970)
chr8 (307-381)||(29739633-29739707)
chr8 (307-428)||(34616181-34616307)
chr8 (332-378)||(36938758-36938804)
chr8 (313-366)||(2421298-2421351)
chr8 (313-378)||(8095404-8095469)
chr8 (313-378)||(20308663-20308728)
chr8 (313-378)||(21095296-21095361)
chr8 (24-190)||(22548413-22548578)
chr8 (307-372)||(31623958-31624023)
chr8 (313-378)||(41522681-41522746)
chr8 (307-372)||(41867915-41867980)
chr8 (307-372)||(43275802-43275867)
chr8 (312-372)||(45385793-45385853)
chr8 (24-91)||(10844577-10844644)
chr8 (24-91)||(12827216-12827283)
chr8 (24-91)||(25144889-25144956)
chr8 (307-378)||(37472455-37472526)
chr8 (307-362)||(43277930-43277985)
chr8 (360-450)||(2075480-2075570)
chr8 (324-378)||(8395064-8395118)
chr8 (312-418)||(45195757-45195863)
chr8 (307-372)||(1570205-1570270)
chr8 (317-378)||(21961885-21961946)
chr8 (42-91)||(27022300-27022349)
chr8 (316-352)||(3237478-3237514)
chr8 (320-372)||(4807431-4807483)
chr8 (312-372)||(27750620-27750680)
chr8 (402-450)||(31844518-31844566)
chr8 (307-359)||(38589872-38589924)
chr8 (338-378)||(44103289-44103329)
chr8 (314-378)||(44606198-44606262)
[»] chr3 (64 HSPs)
chr3 (307-450)||(32980373-32980516)
chr3 (307-379)||(47855330-47855402)
chr3 (313-378)||(23559877-23559942)
chr3 (316-381)||(19252992-19253057)
chr3 (317-378)||(25583176-25583237)
chr3 (307-372)||(29536766-29536831)
chr3 (307-372)||(42632758-42632823)
chr3 (307-372)||(54653965-54654030)
chr3 (307-378)||(8371272-8371343)
chr3 (307-378)||(32979140-32979211)
chr3 (307-374)||(47808103-47808170)
chr3 (307-381)||(11220648-11220722)
chr3 (312-372)||(47806875-47806934)
chr3 (329-379)||(29537134-29537184)
chr3 (307-372)||(11219482-11219547)
chr3 (307-372)||(41386182-41386247)
chr3 (307-372)||(51825620-51825685)
chr3 (307-379)||(7820442-7820514)
chr3 (307-379)||(10987645-10987717)
chr3 (317-381)||(25585823-25585887)
chr3 (307-351)||(51401371-51401415)
chr3 (367-450)||(21515375-21515458)
chr3 (307-378)||(26798899-26798970)
chr3 (307-442)||(43345371-43345506)
chr3 (307-446)||(47766876-47767015)
chr3 (307-454)||(48252985-48253132)
chr3 (307-378)||(53808370-53808441)
chr3 (322-372)||(2124096-2124146)
chr3 (307-425)||(8372562-8372680)
chr3 (42-193)||(14820289-14820439)
chr3 (307-433)||(17345363-17345488)
chr3 (307-377)||(19622057-19622127)
chr3 (314-372)||(42633885-42633943)
chr3 (333-379)||(47854565-47854611)
chr3 (307-372)||(32973191-32973256)
chr3 (307-372)||(32974222-32974287)
chr3 (307-372)||(41387432-41387497)
chr3 (307-372)||(43103295-43103360)
chr3 (307-372)||(48035323-48035388)
chr3 (18-91)||(50347857-50347930)
chr3 (307-372)||(53047949-53048014)
chr3 (307-372)||(53049036-53049101)
chr3 (24-108)||(31284221-31284305)
chr3 (316-379)||(13077943-13078006)
chr3 (24-91)||(13150516-13150583)
chr3 (307-378)||(17350095-17350166)
chr3 (313-372)||(36626789-36626848)
chr3 (312-371)||(43101951-43102010)
chr3 (360-450)||(143096-143186)
chr3 (24-86)||(28561863-28561925)
chr3 (25-91)||(32386696-32386762)
chr3 (313-379)||(48866199-48866265)
chr3 (42-91)||(11179996-11180045)
chr3 (313-362)||(21127983-21128032)
chr3 (42-91)||(32227183-32227232)
chr3 (42-91)||(32227635-32227684)
chr3 (307-372)||(39287522-39287587)
chr3 (32-93)||(41474122-41474183)
chr3 (389-454)||(45422082-45422147)
chr3 (307-364)||(54752668-54752725)
chr3 (312-372)||(11481958-11482018)
chr3 (307-371)||(49122002-49122066)
chr3 (307-379)||(49334329-49334401)
chr3 (307-371)||(51400267-51400331)
[»] chr7 (57 HSPs)
chr7 (370-458)||(27897807-27897896)
chr7 (314-381)||(13446648-13446715)
chr7 (307-433)||(40926457-40926583)
chr7 (307-372)||(22746319-22746384)
chr7 (307-372)||(46674933-46674998)
chr7 (312-372)||(19278410-19278470)
chr7 (307-371)||(46458713-46458777)
chr7 (317-378)||(43930381-43930442)
chr7 (307-379)||(22744798-22744870)
chr7 (316-372)||(36702949-36703005)
chr7 (307-379)||(47163205-47163277)
chr7 (307-378)||(4857253-4857324)
chr7 (42-137)||(5406504-5406599)
chr7 (307-446)||(28326315-28326454)
chr7 (307-378)||(38406070-38406141)
chr7 (307-425)||(14107884-14108002)
chr7 (307-425)||(14417841-14417959)
chr7 (307-381)||(24873587-24873661)
chr7 (312-378)||(26406182-26406248)
chr7 (307-372)||(19279611-19279676)
chr7 (24-105)||(28495971-28496052)
chr7 (307-376)||(41126291-41126360)
chr7 (318-378)||(27899207-27899267)
chr7 (307-379)||(35127862-35127934)
chr7 (307-379)||(43935237-43935309)
chr7 (307-379)||(43936132-43936204)
chr7 (24-91)||(13122467-13122534)
chr7 (317-372)||(22061794-22061849)
chr7 (307-362)||(25153710-25153765)
chr7 (307-381)||(14206725-14206799)
chr7 (307-381)||(14215415-14215489)
chr7 (42-91)||(2193391-2193440)
chr7 (307-372)||(22060515-22060580)
chr7 (307-372)||(43007648-43007713)
chr7 (312-372)||(48672774-48672834)
chr7 (24-91)||(2465850-2465917)
chr7 (24-91)||(2941719-2941786)
chr7 (24-91)||(13125098-13125165)
chr7 (24-91)||(28495570-28495637)
chr7 (24-91)||(34405553-34405620)
chr7 (316-359)||(36702838-36702881)
chr7 (307-446)||(41515048-41515187)
chr7 (24-91)||(42515661-42515728)
chr7 (313-372)||(43006443-43006502)
chr7 (307-362)||(46457122-46457177)
chr7 (307-370)||(48671130-48671192)
chr7 (42-91)||(7646550-7646599)
chr7 (307-372)||(30223975-30224040)
chr7 (307-372)||(33458362-33458426)
chr7 (307-372)||(34557449-34557514)
chr7 (307-367)||(4858348-4858408)
chr7 (312-372)||(7347219-7347279)
chr7 (24-108)||(9125076-9125160)
chr7 (307-371)||(25154936-25155000)
chr7 (312-372)||(30222703-30222763)
chr7 (24-108)||(43776235-43776319)
chr7 (312-368)||(46673547-46673602)
[»] scaffold0024 (2 HSPs)
scaffold0024 (338-447)||(72910-73019)
scaffold0024 (24-85)||(105837-105898)
[»] scaffold0051 (2 HSPs)
scaffold0051 (307-381)||(22179-22253)
scaffold0051 (312-378)||(39894-39960)
[»] scaffold1974 (1 HSPs)
scaffold1974 (307-378)||(621-692)
[»] scaffold1878 (1 HSPs)
scaffold1878 (307-378)||(582-653)
[»] scaffold0290 (2 HSPs)
scaffold0290 (307-378)||(9471-9542)
scaffold0290 (307-381)||(8431-8505)
[»] scaffold0098 (1 HSPs)
scaffold0098 (315-381)||(42336-42402)
[»] scaffold2127 (1 HSPs)
scaffold2127 (307-372)||(514-579)
[»] scaffold0025 (2 HSPs)
scaffold0025 (312-449)||(54648-54785)
scaffold0025 (312-367)||(56704-56759)
[»] scaffold0013 (1 HSPs)
scaffold0013 (307-428)||(96212-96333)
[»] scaffold0166 (1 HSPs)
scaffold0166 (313-373)||(4216-4276)
[»] scaffold0007 (1 HSPs)
scaffold0007 (307-379)||(145861-145933)
[»] scaffold0137 (1 HSPs)
scaffold0137 (42-105)||(7077-7140)
[»] scaffold0045 (1 HSPs)
scaffold0045 (307-374)||(77178-77245)
[»] scaffold0022 (1 HSPs)
scaffold0022 (24-105)||(163082-163163)
[»] scaffold0177 (1 HSPs)
scaffold0177 (312-372)||(1812-1872)
[»] scaffold0499 (1 HSPs)
scaffold0499 (24-91)||(2013-2080)
[»] scaffold0277 (1 HSPs)
scaffold0277 (24-91)||(14664-14731)
[»] scaffold0243 (1 HSPs)
scaffold0243 (24-91)||(1337-1404)
[»] scaffold0020 (1 HSPs)
scaffold0020 (24-91)||(107425-107492)
[»] scaffold0168 (1 HSPs)
scaffold0168 (24-86)||(2859-2921)
[»] scaffold0122 (1 HSPs)
scaffold0122 (328-378)||(16018-16068)
[»] scaffold0322 (1 HSPs)
scaffold0322 (42-91)||(19101-19150)
[»] scaffold0015 (1 HSPs)
scaffold0015 (317-378)||(207791-207852)
[»] scaffold0040 (1 HSPs)
scaffold0040 (24-108)||(2155-2239)
[»] scaffold0002 (1 HSPs)
scaffold0002 (312-372)||(458459-458519)


Alignment Details
Target: scaffold0003 (Bit Score: 245; Significance: 1e-135; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 245; E-Value: 1e-135
Query Start/End: Original strand, 307 - 646
Target Start/End: Complemental strand, 48520 - 48184
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaaaatatattattcttaatataatttt 406  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  48520 actataaagtgtctcaatttgatcccataaatattctgccgtttactcttttggtcatctccgttaattttttaaaatatattattcttgatataatttt 48421  T
Q  407 aaccacttgattgcaggtctatagtatctaagagtgaaccatcaacacttgannnnnnnacagttttcttcatcttctctcttcatcatactatgcagaa 506  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||       || |||||||||||||||||||||| |||||||||||| ||    
T  48420 aaccacttgattgcaggtctatagtatctaagagtgaaccatcaacacttga-ttttttacggttttcttcatcttctctcttcttcatactatgca-aa 48323  T
Q  507 cttcaaatatgcagaaccaaaaaatacatcaaatcctaaaatcttaaacacatcaacaacaccttcttttaacactcatnnnnnnngtccatagaaattt 606  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||       ||||||||||||||    
T  48322 cttcaaatatgcagaaccaaaaaatacatcaaatcctaaaatcttaaacacatcaacaacacctt-gtttaacactcataaaaaaagtccatagaaattt 48224  T
Q  607 atcaataataatcaacaacaaaatcatcatctcatattat 646  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  48223 atcaatagtaatcaacaacaaaatcatcatctcatattat 48184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 316 - 378
Target Start/End: Original strand, 47131 - 47193
Alignment:
Q  316 tgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  47131 tgtctcaatttggtcccataaatcttcttccgtttactattttggtcctctccgttaattttt 47193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 245; Significance: 1e-135; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 245; E-Value: 1e-135
Query Start/End: Original strand, 307 - 646
Target Start/End: Original strand, 27438842 - 27439178
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaaaatatattattcttaatataatttt 406  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  27438842 actataaagtgtctcaatttgatcccataaatattctgccgtttactcttttggtcatctccgttaattttttaaaatatattattcttgatataatttt 27438941  T
Q  407 aaccacttgattgcaggtctatagtatctaagagtgaaccatcaacacttgannnnnnnacagttttcttcatcttctctcttcatcatactatgcagaa 506  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||       || |||||||||||||||||||||| |||||||||||| ||    
T  27438942 aaccacttgattgcaggtctatagtatctaagagtgaaccatcaacacttga-ttttttacggttttcttcatcttctctcttcttcatactatgca-aa 27439039  T
Q  507 cttcaaatatgcagaaccaaaaaatacatcaaatcctaaaatcttaaacacatcaacaacaccttcttttaacactcatnnnnnnngtccatagaaattt 606  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||       ||||||||||||||    
T  27439040 cttcaaatatgcagaaccaaaaaatacatcaaatcctaaaatcttaaacacatcaacaacacctt-gtttaacactcataaaaaaagtccatagaaattt 27439138  T
Q  607 atcaataataatcaacaacaaaatcatcatctcatattat 646  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  27439139 atcaatagtaatcaacaacaaaatcatcatctcatattat 27439178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 320 - 514
Target Start/End: Original strand, 13800096 - 13800287
Alignment:
Q  320 tcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaaaatatattattcttaatataattttaaccacttgattg 419  Q
    |||||||| |||||||||||||   |||| |||| |||||||  | |  |||| ||||||||  |||||||||||| |||| ||||||||||||||||||    
T  13800096 tcaatttggtcccataaatctttctccgtatactgttttggttttttt-gttagttttttaatgtatattattcttgatatcattttaaccacttgattg 13800194  T
Q  420 caggtctatagtatctaagagtgaaccatcaacacttgannnnnnnacagttttcttcatcttctctcttcatcatactatgcagaacttcaaat 514  Q
    |||||||||||||| ||||||||||||||||||||||||       | ||||| ||||||||||||||||||||||||||  |||||||| ||||    
T  13800195 caggtctatagtatttaagagtgaaccatcaacacttga--tttttatagtttacttcatcttctctcttcatcatactacacagaactttaaat 13800287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 307 - 381
Target Start/End: Original strand, 33807741 - 33807815
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaa 381  Q
    |||| |||||||||||||||||| |||||||| |||||||||||||  |||||||||||||||||||||||||||    
T  33807741 actataaagtgtctcaatttgatgccataaattttctgccgtttaccgttttggtcctctccgttaattttttaa 33807815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 307 - 379
Target Start/End: Complemental strand, 22299967 - 22299895
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaatttttt 379  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||| ||||||    
T  22299967 actataaagtgtctcaatttggtcccataaatcttctgccgtttactattttggtcatctccgttattttttt 22299895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 316 - 378
Target Start/End: Complemental strand, 27440230 - 27440168
Alignment:
Q  316 tgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  27440230 tgtctcaatttggtcccataaatcttcttccgtttactattttggtcctctccgttaattttt 27440168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 307 - 372
Target Start/End: Complemental strand, 8412380 - 8412315
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| |||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||    
T  8412380 actataaagtgtctcaatttggtcccataaatcttgtgccgtttactattttggtcctctccgtta 8412315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 468 - 566
Target Start/End: Complemental strand, 9928506 - 9928392
Alignment:
Q  468 agttttcttcatcttctctcttcatcatactatgcagaacttcaa----------------atatgcagaaccaaaaaatacatcaaatcctaaaatctt 551  Q
    |||||||||||||||||||||||||||||||||||||||||||||                ||||||||||||| |||| |||||||||||||||| |||    
T  9928506 agttttcttcatcttctctcttcatcatactatgcagaacttcaaatcacattcattgatcatatgcagaaccagaaaacacatcaaatcctaaaagctt 9928407  T
Q  552 aaacacatcaacaac 566  Q
    |||||||||||||||    
T  9928406 aaacacatcaacaac 9928392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 307 - 379
Target Start/End: Original strand, 8411138 - 8411210
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaatttttt 379  Q
    |||| |||||||||||||||| ||  ||||||||| ||||||||||| |||||||||||||||||||| ||||    
T  8411138 actataaagtgtctcaatttggtcttataaatcttatgccgtttactattttggtcctctccgttaatatttt 8411210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 307 - 381
Target Start/End: Complemental strand, 31740336 - 31740262
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaa 381  Q
    |||| |||||||||||||||| ||||||||||||| ||||||||||  |||||||||| ||||||  ||||||||    
T  31740336 actataaagtgtctcaatttggtcccataaatcttatgccgtttaccattttggtcctatccgtttgttttttaa 31740262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 532 - 575
Target Start/End: Original strand, 13800346 - 13800389
Alignment:
Q  532 acatcaaatcctaaaatcttaaacacatcaacaacaccttcttt 575  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  13800346 acatcaaatcctaaaatcttaaacacatcaacaaaaccttcttt 13800389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 307 - 378
Target Start/End: Original strand, 31738415 - 31738486
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||| ||||||| |||||||| |||||||| |||||||| ||||||  |||||||||||||||||| |||||    
T  31738415 actataaagtgtttcaatttggtcccataagtcttctgcggtttaccattttggtcctctccgttagttttt 31738486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 307 - 378
Target Start/End: Complemental strand, 33802081 - 33802010
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||| ||||||||| |||||||||||||||||||||||  ||||||  | |||||||||||||||| |||||    
T  33802081 actataaagtgtcttaatttgatcccataaatcttctgtagtttaccgtattggtcctctccgttagttttt 33802010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 108
Target Start/End: Original strand, 12194463 - 12194529
Alignment:
Q  42 aactccacagttaagcatgcttgatttgtagcaattttaggatggatgacattttgggaagttttcc 108  Q
    ||||||||||||||||||| ||||  || ||||||||||||||||||||| |||| | |||||||||    
T  12194463 aactccacagttaagcatgtttgacatggagcaattttaggatggatgaccttttagaaagttttcc 12194529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 307 - 378
Target Start/End: Original strand, 9927658 - 9927728
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||| |||||||||||||||| ||||||||| ||||   |||||||| |||||||| |||||||||||||||    
T  9927658 actataaagtgtctcaatttggtcccataaa-cttcaatcgtttactattttggtcatctccgttaattttt 9927728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 307 - 378
Target Start/End: Complemental strand, 18139551 - 18139480
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||| |||||||||||| ||| |||| || ||||||||||||||| | |||||||||||||| ||| |||||    
T  18139551 actataaagtgtctcaaattggtcccttatatcttctgccgtttattgttttggtcctctccattagttttt 18139480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 378
Target Start/End: Complemental strand, 293699 - 293633
Alignment:
Q  312 aaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    ||||||| |||||||| || ||||| ||||||| |||||||  ||||||||||||||||| ||||||    
T  293699 aaagtgtttcaatttggtctcataagtcttctgtcgtttaccattttggtcctctccgtttattttt 293633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 307 - 364
Target Start/End: Original strand, 5311331 - 5311388
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcct 364  Q
    |||| |||||||||||||||| ||| ||||||||| || |||||||| ||||||||||    
T  5311331 actataaagtgtctcaatttggtcctataaatcttatgtcgtttactattttggtcct 5311388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 313 - 378
Target Start/End: Complemental strand, 14328832 - 14328767
Alignment:
Q  313 aagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||||||| |||||| || ||||| |||| || |||||||| |||||||||||||||||| |||||    
T  14328832 aagtgtcttaatttggtctcataattcttttgtcgtttactattttggtcctctccgttacttttt 14328767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 313 - 378
Target Start/End: Complemental strand, 14421842 - 14421777
Alignment:
Q  313 aagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||||||| |||||| || ||||| |||| || |||||||| |||||||||||||||||| |||||    
T  14421842 aagtgtcttaatttggtctcataattcttttgtcgtttactattttggtcctctccgttacttttt 14421777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 91
Target Start/End: Original strand, 9352179 - 9352246
Alignment:
Q  24 ggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatggatgac 91  Q
    ||||||| |||| | || |||||||||||||||| ||||||| ||| ||||||||| |||||| ||||    
T  9352179 ggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgac 9352246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 105
Target Start/End: Complemental strand, 9440320 - 9440257
Alignment:
Q  42 aactccacagttaagcatgcttgatttgtagcaattttaggatggatgacattttgggaagttt 105  Q
    |||| ||||||||||  ||||||||||| ||||||||| |||||| |||| || ||||||||||    
T  9440320 aacttcacagttaagtgtgcttgatttggagcaatttttggatgggtgaccttatgggaagttt 9440257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 91
Target Start/End: Original strand, 13492449 - 13492516
Alignment:
Q  24 ggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatggatgac 91  Q
    ||||||| |||| | || |||||||||||||||| ||||||| ||| ||||||||| |||||| ||||    
T  13492449 ggtagctaattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgac 13492516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 28780227 - 28780310
Alignment:
Q  24 ggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatggatgacattttgggaagttttc 107  Q
    ||||||| |||| | || |||||||||||||||| ||||||| ||| ||||||||| |||||| |||| |   |||||||||||    
T  28780227 ggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagttttc 28780310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 372
Target Start/End: Original strand, 8447273 - 8447338
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| |||||||||||||||| |||| ||  |||| |||||||  ||||||||||||| |||||||    
T  8447273 actataaagtgtctcaatttggtcccttatgtcttttgccgttacctcttttggtcctatccgtta 8447338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 372
Target Start/End: Original strand, 8456077 - 8456142
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| |||||||||||||||| |||| ||  |||| |||||||  ||||||||||||| |||||||    
T  8456077 actataaagtgtctcaatttggtcccttatgtcttttgccgttacctcttttggtcctatccgtta 8456142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 562
Target Start/End: Original strand, 13800307 - 13800352
Alignment:
Q  518 cagaaccaaaaaa-tacatcaaatcctaaaatcttaaacacatcaa 562  Q
    ||||| ||||||| ||| ||||||||||||||||||||||||||||    
T  13800307 cagaatcaaaaaaatacttcaaatcctaaaatcttaaacacatcaa 13800352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 17027542 - 17027493
Alignment:
Q  42 aactccacagttaagcatgcttgatttgtagcaattttaggatggatgac 91  Q
    |||||||||||||||| ||||||| ||| ||||||||| |||||| ||||    
T  17027542 aactccacagttaagcgtgcttgacttggagcaattttgggatgggtgac 17027493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 601 - 637
Target Start/End: Complemental strand, 9928215 - 9928179
Alignment:
Q  601 aaatttatcaataataatcaacaacaaaatcatcatc 637  Q
    |||||||| || |||||||||||||||||||||||||    
T  9928215 aaatttattaacaataatcaacaacaaaatcatcatc 9928179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 317 - 373
Target Start/End: Original strand, 14326215 - 14326271
Alignment:
Q  317 gtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaa 373  Q
    ||||||||||| |||||||| ||||||  |||||||| || ||||||| ||||||||    
T  14326215 gtctcaatttggtcccataattcttctatcgtttactattgtggtcctttccgttaa 14326271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 317 - 373
Target Start/End: Original strand, 14419225 - 14419281
Alignment:
Q  317 gtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaa 373  Q
    ||||||||||| |||||||| ||||||  |||||||| || ||||||| ||||||||    
T  14419225 gtctcaatttggtcccataattcttctatcgtttactattgtggtcctttccgttaa 14419281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 402 - 450
Target Start/End: Original strand, 29675624 - 29675672
Alignment:
Q  402 attttaaccacttgattgcaggtctatagtatctaagagtgaaccatca 450  Q
    |||||||||||| ||||||||||| || |||||||| |||| |||||||    
T  29675624 attttaaccactggattgcaggtccattgtatctaatagtgcaccatca 29675672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 312 - 352
Target Start/End: Complemental strand, 34084193 - 34084153
Alignment:
Q  312 aaagtgtctcaatttgatcccataaatcttctgccgtttac 352  Q
    |||||||||||||||| || ||||||||||||| |||||||    
T  34084193 aaagtgtctcaatttggtctcataaatcttctgtcgtttac 34084153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 166; Significance: 2e-88; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 312 - 562
Target Start/End: Complemental strand, 38473614 - 38473364
Alignment:
Q  312 aaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaaaatatattattcttaatataattttaacca 411  Q
    ||||||||| |||||| |||||||||||||||| |||||||| |||||||| | ||||||||||||||||  ||||||| |||| |||| ||||||||||    
T  38473614 aaagtgtcttaatttggtcccataaatcttctgtcgtttactattttggtcatttccgttaattttttaatgtatattaatcttgatatcattttaacca 38473515  T
Q  412 cttgattgcaggtctatagtatctaagagtgaaccatcaacacttgannnnnnnacagttttcttcatcttctctcttcatcatactatgcagaacttca 511  Q
    |||||||||||||||||||||||||||||||||||||||||||||||       ||| ||||||||||||||||||||||||||||||||||||||||||    
T  38473514 cttgattgcaggtctatagtatctaagagtgaaccatcaacacttga-ttttttacaattttcttcatcttctctcttcatcatactatgcagaacttca 38473416  T
Q  512 aatatgcagaaccaaaaaatacatcaaatcctaaaatctt-aaacacatcaa 562  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  38473415 aatatgcataaccaaaaaatacatcaaatcctaaaatcttaaaacacatcaa 38473364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 307 - 379
Target Start/End: Original strand, 15613557 - 15613629
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaatttttt 379  Q
    |||| |||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  15613557 actataaagtgtctcaatttggtcccataaatcttcttccgtttactattttggtcctctccgttaatttttt 15613629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 307 - 428
Target Start/End: Complemental strand, 5384410 - 5384289
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaaaatatattattcttaatataatttt 406  Q
    |||| |||||||||||||||| ||||||||||||||  ||||||||| |||||||||||||||||| ||||||||  | || |||| || |||||||||     
T  5384410 actataaagtgtctcaatttggtcccataaatcttcgtccgtttactattttggtcctctccgttagttttttaatgtttaatatttttgatataatttc 5384311  T
Q  407 aaccacttgattgcaggtctat 428  Q
    ||||| | ||||| || |||||    
T  5384310 aaccattcgattgtagatctat 5384289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 307 - 378
Target Start/End: Original strand, 42510166 - 42510237
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||| |||||    
T  42510166 actataaagtgtctcaatttggtcccataaatcttctgccgtttactattttggttctctccgttagttttt 42510237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 307 - 425
Target Start/End: Original strand, 1273141 - 1273259
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaaaatatattattcttaatataatttt 406  Q
    |||| ||| |||||||||||| ||||||||||||||||| ||||||  ||||||||| |||||||| ||||||||  | || |||| || |||| ||||     
T  1273141 actataaaatgtctcaatttggtcccataaatcttctgcagtttacaattttggtcccctccgttagttttttaatgtttaatatttttgatatgatttc 1273240  T
Q  407 aaccacttgattgcaggtc 425  Q
    ||||| | |||||||||||    
T  1273241 aaccattcgattgcaggtc 1273259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 313 - 378
Target Start/End: Complemental strand, 12830996 - 12830931
Alignment:
Q  313 aagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    ||||||||||||||| ||| |||| |||||||| ||||||| ||||||||||||||||||||||||    
T  12830996 aagtgtctcaatttggtcctataactcttctgctgtttactattttggtcctctccgttaattttt 12830931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 313 - 378
Target Start/End: Complemental strand, 12862976 - 12862911
Alignment:
Q  313 aagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    ||||||||||||||| ||| |||| |||||||| ||||||| ||||||||||||||||||||||||    
T  12862976 aagtgtctcaatttggtcctataactcttctgctgtttactattttggtcctctccgttaattttt 12862911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 307 - 379
Target Start/End: Complemental strand, 22812451 - 22812379
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaatttttt 379  Q
    |||| ||| ||||||| |||||||||||||||||||||| ||||||| ||||||||| |||||||| ||||||    
T  22812451 actataaaatgtctcactttgatcccataaatcttctgcagtttactattttggtcccctccgttagtttttt 22812379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 307 - 374
Target Start/End: Original strand, 1663239 - 1663306
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaat 374  Q
    |||| ||||||||| |||||| ||| ||||||||||||||||||||| |||||||| |||||||||||    
T  1663239 actataaagtgtcttaatttggtcctataaatcttctgccgtttactattttggtcttctccgttaat 1663306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 307 - 378
Target Start/End: Original strand, 42979500 - 42979571
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||| ||||||| |||||||| ||| |||| |||||||||||||||| ||||||||||||||||| ||||||    
T  42979500 actataaagtgtttcaatttggtccaataattcttctgccgtttactattttggtcctctccgttgattttt 42979571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 307 - 372
Target Start/End: Complemental strand, 15615024 - 15614959
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| |||||||||||||||| | |||||||| |||||||||||||| ||||||||||||| ||||    
T  15615024 actataaagtgtctcaatttggttccataaattttctgccgtttactattttggtcctctctgtta 15614959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 307 - 372
Target Start/End: Complemental strand, 26404274 - 26404209
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| |||||||||||||||||||||||||||||| || | |||||| ||||||||||| ||||||    
T  26404274 actataaagtgtctcaatttgatcccataaatcttatgtcatttactattttggtcctcaccgtta 26404209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 312 - 372
Target Start/End: Complemental strand, 10085904 - 10085844
Alignment:
Q  312 aaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    ||||||| |||||||| |||||||||||||||||  |||||| ||||||||||||||||||    
T  10085904 aaagtgtttcaatttggtcccataaatcttctgctatttactattttggtcctctccgtta 10085844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 307 - 379
Target Start/End: Complemental strand, 42980773 - 42980701
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaatttttt 379  Q
    |||| |||||||||||||||| || |||| |||||||||| |||||  |||||||||| ||||||||||||||    
T  42980773 actataaagtgtctcaatttggtctcatatatcttctgccatttaccattttggtcctttccgttaatttttt 42980701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 307 - 378
Target Start/End: Original strand, 12933803 - 12933874
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||| ||||||||||||||||||| ||||| |||||||||||||||  ||| |||||| |||||| ||||||    
T  12933803 actataaagtgtctcaatttgatctcataagtcttctgccgtttaccatttcggtcctttccgtttattttt 12933874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 307 - 378
Target Start/End: Original strand, 21387689 - 21387760
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||| ||| |||||||||||| |||||||||||||||||||||  ||||||||||||| || |||| |||||    
T  21387689 actataaaatgtctcaatttggtcccataaatcttctgccgttacctcttttggtcctgtctgttagttttt 21387760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 594 - 637
Target Start/End: Complemental strand, 38473316 - 38473273
Alignment:
Q  594 tccatagaaatttatcaataataatcaacaacaaaatcatcatc 637  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  38473316 tccatagaaatttatcaataataatcatcaacaaaatcatcatc 38473273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 312 - 378
Target Start/End: Original strand, 5382999 - 5383065
Alignment:
Q  312 aaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||||||||||||||| |||||||||||||  | |||||||| ||||| |||||||||||| |||||    
T  5382999 aaagtgtctcaatttggtcccataaatctttggtcgtttactattttgatcctctccgttagttttt 5383065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 307 - 381
Target Start/End: Complemental strand, 15857682 - 15857608
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaa 381  Q
    |||| ||||||| |||||||| ||||||||||||| || |||||||  |||||||| ||||||||| ||||||||    
T  15857682 actataaagtgtttcaatttgttcccataaatcttatgtcgtttaccattttggtcatctccgttagttttttaa 15857608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 313 - 363
Target Start/End: Complemental strand, 22819607 - 22819557
Alignment:
Q  313 aagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcc 363  Q
    ||||||||||||||| |||||||| |||||||||||||||| |||||||||    
T  22819607 aagtgtctcaatttggtcccataactcttctgccgtttactattttggtcc 22819557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 307 - 371
Target Start/End: Complemental strand, 19525352 - 19525288
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtt 371  Q
    |||| |||||||||| ||||| || ||||| |||||||||||||||  |||||||||||||||||    
T  19525352 actataaagtgtctccatttggtcacataagtcttctgccgtttaccattttggtcctctccgtt 19525288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 313 - 373
Target Start/End: Complemental strand, 24761779 - 24761719
Alignment:
Q  313 aagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaa 373  Q
    |||||||||||||||||| ||||| || ||||||||||||  ||||| |||||||||||||    
T  24761779 aagtgtctcaatttgatctcataactcgtctgccgtttaccattttgttcctctccgttaa 24761719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 24 - 91
Target Start/End: Original strand, 189185 - 189252
Alignment:
Q  24 ggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatggatgac 91  Q
    ||||||| |||| | || |||||||||||||||||||||||| ||| ||||||||| |||||| ||||    
T  189185 ggtagctcattccataagaactccacagttaagcatgcttgacttggagcaattttgggatgggtgac 189252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 307 - 362
Target Start/End: Original strand, 18678028 - 18678083
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtc 362  Q
    |||| |||||||||||||||| |||||||||||||||| |||||||  ||||||||    
T  18678028 actataaagtgtctcaatttggtcccataaatcttctgtcgtttaccgttttggtc 18678083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 307 - 378
Target Start/End: Original strand, 18693750 - 18693821
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||| ||| ||||||||| || |||||||||||||||| ||||  |||||||||||||||| |||| |||||    
T  18693750 actataaaatgtctcaatctggtcccataaatcttctgtcgttacctcttttggtcctctctgttagttttt 18693821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 314 - 381
Target Start/End: Complemental strand, 21389200 - 21389133
Alignment:
Q  314 agtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaa 381  Q
    |||||||||||||| |||||||| |||||  |||||||||  | ||||||||||||||| ||||||||    
T  21389200 agtgtctcaatttggtcccataagtcttcctccgtttactaatatggtcctctccgttagttttttaa 21389133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 307 - 374
Target Start/End: Original strand, 26403359 - 26403426
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaat 374  Q
    |||| ||||||||||||||||||| ||||||| || || |||||||| |||||||| |||| ||||||    
T  26403359 actataaagtgtctcaatttgatctcataaattttatgtcgtttactattttggtcttctctgttaat 26403426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 381
Target Start/End: Complemental strand, 18695711 - 18695637
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaa 381  Q
    |||| |||||||||||||||| |||||||| |||||  |||||||||  | ||||| ||||||||| ||||||||    
T  18695711 actataaagtgtctcaatttggtcccataagtcttcatccgtttactaatatggtcatctccgttagttttttaa 18695637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 19827199 - 19827149
Alignment:
Q  312 aaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtc 362  Q
    |||||||||||||||| ||||||||||||||| ||||||||  ||||||||    
T  19827199 aaagtgtctcaatttggtcccataaatcttcttccgtttaccattttggtc 19827149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 378
Target Start/End: Complemental strand, 22819564 - 22819510
Alignment:
Q  324 tttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||| |||||||| |||||||||||||||| |||||||| ||||||||| |||||    
T  22819564 tttggtcccataactcttctgccgtttactattttggtcatctccgttagttttt 22819510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 320 - 378
Target Start/End: Original strand, 38471354 - 38471412
Alignment:
Q  320 tcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||||||| | ||||||||||||| ||||||||| ||||||| ||||| ||||||||||    
T  38471354 tcaatttggttccataaatcttcttccgtttactattttggttctctctgttaattttt 38471412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 313 - 362
Target Start/End: Complemental strand, 2167572 - 2167523
Alignment:
Q  313 aagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtc 362  Q
    |||||| |||||||| ||||||||||||||||||||||| | ||||||||    
T  2167572 aagtgtttcaatttggtcccataaatcttctgccgtttattattttggtc 2167523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 307 - 372
Target Start/End: Original strand, 15509247 - 15509312
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| |||||||||||||||| |||| ||  ||||||||||||  || ||||||||||||||||||    
T  15509247 actataaagtgtctcaatttggtcccttatgtcttctgccgttacctattttggtcctctccgtta 15509312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 307 - 372
Target Start/End: Complemental strand, 15510327 - 15510262
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| |||||||||||||||| |||| ||  ||||||||||||  |||||||||||||||| ||||    
T  15510327 actataaagtgtctcaatttggtcccttatgtcttctgccgttacctcttttggtcctctctgtta 15510262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 322 - 427
Target Start/End: Complemental strand, 32735528 - 32735423
Alignment:
Q  322 aatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaaaatatattattcttaatataattttaaccacttgattgca 421  Q
    |||||| |||||||| |||||||||||||| | |||||||| |||| |||| | ||||||  | || |||| || ||||||||| |||   |||||||||    
T  32735528 aatttggtcccataactcttctgccgtttattattttggtcatctctgttagtattttaatgtctaatattttttatataatttcaacagtttgattgca 32735429  T
Q  422 ggtcta 427  Q
    ||||||    
T  32735428 ggtcta 32735423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 307 - 360
Target Start/End: Complemental strand, 42511730 - 42511677
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttgg 360  Q
    |||| |||||||||||||||| | |||||||||||||||||||| || ||||||    
T  42511730 actataaagtgtctcaatttgcttccataaatcttctgccgtttcctattttgg 42511677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 307 - 379
Target Start/End: Complemental strand, 8762464 - 8762392
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaatttttt 379  Q
    |||| ||| |||||||||||| || ||||||| || || |||||||| |||| ||||||||||||||| ||||    
T  8762464 actataaaatgtctcaatttggtcacataaattttatgtcgtttactattttagtcctctccgttaatatttt 8762392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 84
Target Start/End: Complemental strand, 42788675 - 42788615
Alignment:
Q  24 ggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggat 84  Q
    ||||||| |||| |||| |||||||||||||||| ||||||| ||| ||||||||| ||||    
T  42788675 ggtagctcattccacaagaactccacagttaagcgtgcttgacttggagcaattttgggat 42788615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 91
Target Start/End: Original strand, 2193933 - 2194000
Alignment:
Q  24 ggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatggatgac 91  Q
    ||||||| |||| | || |||||||||||||||| ||||||| ||| ||||||||| |||||| ||||    
T  2193933 ggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgac 2194000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 91
Target Start/End: Original strand, 2474076 - 2474143
Alignment:
Q  24 ggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatggatgac 91  Q
    ||||||| |||| | || |||||||||||||||| ||||||| ||| ||||||||| |||||| ||||    
T  2474076 ggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgac 2474143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 307 - 366
Target Start/End: Complemental strand, 7345454 - 7345395
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctct 366  Q
    |||| |||||||||||||||| |||||||||| || || ||||  |||||||||||||||    
T  7345454 actataaagtgtctcaatttggtcccataaatattttgtcgttatctcttttggtcctct 7345395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 8642063 - 8641996
Alignment:
Q  24 ggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatggatgac 91  Q
    ||||||| |||| | || |||||||||||||||| ||||||| ||| |||||||||| ||||| ||||    
T  8642063 ggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttaagatgggtgac 8641996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 332 - 379
Target Start/End: Original strand, 10084675 - 10084722
Alignment:
Q  332 cataaatcttctgccgtttactcttttggtcctctccgttaatttttt 379  Q
    |||||||||| || |||||||| |||||||||||||||||||| ||||    
T  10084675 cataaatcttttgtcgtttactattttggtcctctccgttaatatttt 10084722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 307 - 378
Target Start/End: Original strand, 12947964 - 12948035
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||| ||||||||||||||||||| ||||| |||| || |||||||  ||| |||||| |||||| ||||||    
T  12947964 actataaagtgtctcaatttgatctcataagtcttatgtcgtttaccatttcggtcctttccgtttattttt 12948035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 105
Target Start/End: Original strand, 18304548 - 18304629
Alignment:
Q  24 ggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatggatgacattttgggaagttt 105  Q
    ||||||| |||| | || || |||||||||||||||| |||| ||| |||||||||  ||||| |||| ||||| |||||||    
T  18304548 ggtagctcattccataagaattccacagttaagcatgtttgacttggagcaattttgtgatgggtgaccttttgagaagttt 18304629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 372
Target Start/End: Complemental strand, 22650692 - 22650627
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| |||||||||||||||| |||| ||  |||| |||||||  ||||||||||||| |||||||    
T  22650692 actataaagtgtctcaatttggtcccttatgtcttttgccgttacctcttttggtcctatccgtta 22650627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 105
Target Start/End: Original strand, 34371729 - 34371810
Alignment:
Q  24 ggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatggatgacattttgggaagttt 105  Q
    ||||||| |||| | || ||| |||||||||||| ||||||| ||| ||||||||| |||||| |||| |  ||||||||||    
T  34371729 ggtagctcattccataagaacaccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctactgggaagttt 34371810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 378
Target Start/End: Original strand, 40058076 - 40058141
Alignment:
Q  313 aagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||||| |||| ||| || ||||| |||||||||||||||  |||||||| ||||||||| |||||    
T  40058076 aagtgtttcaaattggtctcataactcttctgccgtttaccattttggtcatctccgttagttttt 40058141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 123; Significance: 7e-63; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 18 - 216
Target Start/End: Complemental strand, 23091540 - 23091341
Alignment:
Q  18 ctttctggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatggatgacattttgggaagttttcccaaacaaca 117  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||| ||| |||||||||||||||||| || |||     
T  23091540 ctttctggtagcttattctataaaaactccacagttaagcatgcttgacttgtagcaattttgggatgggtgatattttgggaagttttcccgaaaaacg 23091441  T
Q  118 ggcaagtgaggataaaacacgctnnnnnnnctagtgttagtttat-ggggtcagttggcaaccctgaaagcagtctgatatgtgacgagattattgttgg 216  Q
    |||||||||||||||||||||||       ||||||||||||||| ||||||||| |||||||||||||||||| || ||||||| ||||||||||||||    
T  23091440 ggcaagtgaggataaaacacgctaaaaaaactagtgttagtttatgggggtcagtcggcaaccctgaaagcagtttggtatgtgatgagattattgttgg 23091341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 307 - 372
Target Start/End: Complemental strand, 33377428 - 33377363
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  33377428 actataaagtgtctcaatttggtcccataaatcttctgccgtttactattttggtcctctccgtta 33377363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 312 - 379
Target Start/End: Original strand, 33376275 - 33376342
Alignment:
Q  312 aaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaatttttt 379  Q
    |||||||||||||||| |||||||||||||||| |||||||| |||| ||||||||||||||||||||    
T  33376275 aaagtgtctcaatttggtcccataaatcttctgtcgtttactattttagtcctctccgttaatttttt 33376342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 307 - 381
Target Start/End: Complemental strand, 44305043 - 44304969
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaa 381  Q
    ||||||||||||||||||||| ||| |||||||||| || ||||||| |||||||| ||||||||||||||||||    
T  44305043 actacaaagtgtctcaatttggtcctataaatcttccgctgtttactattttggtcatctccgttaattttttaa 44304969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 307 - 378
Target Start/End: Original strand, 34438458 - 34438529
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||| |||| |||||    
T  34438458 actataaagtgtctcaatttggtcccataaatcttctgccgtttactattttggttctctctgttagttttt 34438529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 307 - 378
Target Start/End: Original strand, 44302772 - 44302843
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||| ||||||||||||||||||||||||||| ||||||| ||  ||||||||||||||||||||| |||||    
T  44302772 actataaagtgtctcaatttgatcccataaattttctgccattacctcttttggtcctctccgttagttttt 44302843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 307 - 446
Target Start/End: Complemental strand, 46796090 - 46795951
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaaaatatattattcttaatataatttt 406  Q
    |||| |||||||||||||||| |||||||| |||||  ||||||||| || ||||||||||||||| ||||||||  | ||   || || |||| |||||    
T  46796090 actataaagtgtctcaatttggtcccataagtcttcctccgtttactattgtggtcctctccgttagttttttaatgtctaaattttttgatatgatttt 46795991  T
Q  407 aaccacttgattgcaggtctatagtatctaagagtgaacc 446  Q
    ||||| ||||||||| ||| || |||| ||| ||||||||    
T  46795990 aaccatttgattgcatgtccattgtatttaatagtgaacc 46795951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 307 - 449
Target Start/End: Complemental strand, 15787566 - 15787425
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaaaatatattattcttaatataatttt 406  Q
    |||| |||||||||||||||| |||||||| | || ||||||||||  |||||||||||||| ||||||||||||  | || |||| ||||||| ||| |    
T  15787566 actataaagtgtctcaatttggtcccataacttttttgccgtttaccattttggtcctctccattaattttttaatgtctaatatttttaatatgattat 15787467  T
Q  407 aaccacttgattgcaggtctatagtatctaagagtgaaccatc 449  Q
     |||  | ||||||||||| ||||||| | | |||||||||||    
T  15787466 -accgttggattgcaggtccatagtatattatagtgaaccatc 15787425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 307 - 372
Target Start/End: Original strand, 5687227 - 5687292
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| |||||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||    
T  5687227 actataaagtgtctcaatttggtcccataaatcttttgccgtttactattttggtcatctccgtta 5687292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 307 - 378
Target Start/End: Complemental strand, 30683091 - 30683020
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||| |||||||||||||||| |||||||||||||| |||||| | |||||||||| ||||||||| |||||    
T  30683091 actataaagtgtctcaatttggtcccataaatcttcggccgttaattcttttggtcttctccgttagttttt 30683020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 307 - 433
Target Start/End: Original strand, 11113794 - 11113920
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaaaatatattattcttaatataatttt 406  Q
    |||| |||||||||||||||| || ||||| |||||||||||||||  |||||||| | ||||||| |||||  |  | || |||| ||||||||||| |    
T  11113794 actataaagtgtctcaatttggtctcataactcttctgccgtttaccattttggtcatttccgttagtttttagatgtctaatatttttaatataattat 11113893  T
Q  407 aaccacttgattgcaggtctatagtat 433  Q
    ||||  | ||||||||||| |||||||    
T  11113894 aaccgttcgattgcaggtccatagtat 11113920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 312 - 378
Target Start/End: Complemental strand, 15446729 - 15446663
Alignment:
Q  312 aaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    ||||||| |||||||| |||||||||| |||| ||||||||| |||||||||||||||||| |||||    
T  15446729 aaagtgtttcaatttggtcccataaattttctaccgtttactattttggtcctctccgttagttttt 15446663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 318 - 372
Target Start/End: Original strand, 26788585 - 26788639
Alignment:
Q  318 tctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||||||||  ||||||||||||||||||||||||| ||||||||||||||||||    
T  26788585 tctcaatttcgtcccataaatcttctgccgtttactattttggtcctctccgtta 26788639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 307 - 377
Target Start/End: Complemental strand, 34439724 - 34439654
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaatttt 377  Q
    |||| ||| ||| |||||||| ||||||||||||||||||||||||| |||||||| ||||||||| ||||    
T  34439724 actataaaatgtttcaatttggtcccataaatcttctgccgtttactattttggtcatctccgttagtttt 34439654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 318 - 378
Target Start/End: Original strand, 86866 - 86926
Alignment:
Q  318 tctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||||||||| |||||||||| |||||||||||||| |||||||| ||||||||| |||||    
T  86866 tctcaatttggtcccataaatattctgccgtttactgttttggtcttctccgttagttttt 86926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 307 - 378
Target Start/End: Original strand, 11094578 - 11094649
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||| ||||||||| |||||| ||| |||||| |||||||||||||| |||||||||||| ||||| |||||    
T  11094578 actataaagtgtcttaatttggtcctataaattttctgccgtttactgttttggtcctcttcgttagttttt 11094649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 307 - 378
Target Start/End: Original strand, 35787848 - 35787919
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||| ||| ||| |||||||| |||||||||||||||| |||||||  |||||||||||||||||| |||||    
T  35787848 actataaaatgtttcaatttggtcccataaatcttctgtcgtttaccgttttggtcctctccgttagttttt 35787919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 307 - 381
Target Start/End: Complemental strand, 28103550 - 28103476
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaa 381  Q
    |||| |||||||||||||||| ||||||||  ||||||||||||||  |||||||||| ||||||  ||||||||    
T  28103550 actataaagtgtctcaatttggtcccataagacttctgccgtttaccattttggtcctttccgtttgttttttaa 28103476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 307 - 372
Target Start/End: Complemental strand, 1273497 - 1273432
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| |||||||||||||||| |||||||| |||| || ||||| || ||||||||||||||||||    
T  1273497 actataaagtgtctcaatttggtcccataagtcttatgtcgtttgctattttggtcctctccgtta 1273432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 307 - 372
Target Start/End: Complemental strand, 5688701 - 5688636
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| |||||||||||||||| | ||||||||||| || |||||||| |||||||| |||||||||    
T  5688701 actataaagtgtctcaatttggttccataaatcttatgtcgtttactattttggtcatctccgtta 5688636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 307 - 428
Target Start/End: Original strand, 27408815 - 27408936
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaaaatatattattcttaatataatttt 406  Q
    |||| |||||||||||||||| ||||||||||||||| ||||||||  ||||||||   |||||   |||||||| || || |||| |||||||  |||     
T  27408815 actataaagtgtctcaatttggtcccataaatcttcttccgtttaccattttggtcacgtccgtgtgttttttaatatctaatatttttaatatgttttc 27408914  T
Q  407 aaccacttgattgcaggtctat 428  Q
     |||| | ||||||||||||||    
T  27408915 gaccattcgattgcaggtctat 27408936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 307 - 372
Target Start/End: Complemental strand, 37560363 - 37560298
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| |||||||||||||||| |||||||||||||  | |||||||| | ||||||||||||||||    
T  37560363 actataaagtgtctcaatttggtcccataaatcttacgacgtttactatcttggtcctctccgtta 37560298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 313 - 454
Target Start/End: Original strand, 38417611 - 38417752
Alignment:
Q  313 aagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaaaatatattattcttaatataattttaaccac 412  Q
    |||||| |||||||| ||||||||||||| || |||||||| ||| |||||||||||||| | ||||||  | ||   || ||||||| |||| ||||      
T  38417611 aagtgtgtcaatttggtcccataaatcttatgtcgtttactatttcggtcctctccgttagtattttaatgtttagattttttaatatgatttcaaccgt 38417710  T
Q  413 ttgattgcaggtctatagtatctaagagtgaaccatcaacac 454  Q
    ||||||||||||| || ||||  || | ||| ||||||||||    
T  38417711 ttgattgcaggtccattgtatacaacactgacccatcaacac 38417752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 307 - 372
Target Start/End: Complemental strand, 44128398 - 44128333
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| |||||||||||||||  |||  |||||||| ||||||||||| ||||||||||||||||||    
T  44128398 actataaagtgtctcaatttagtcctttaaatcttatgccgtttactattttggtcctctccgtta 44128333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 307 - 372
Target Start/End: Complemental strand, 55953916 - 55953851
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| ||| |||||||||||| |||| |||||||| ||||||||||| ||||||||||| ||||||    
T  55953916 actataaaatgtctcaatttggtcccgtaaatcttatgccgtttactattttggtcctccccgtta 55953851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 307 - 378
Target Start/End: Complemental strand, 11115044 - 11114973
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||| ||||| |||||||||| |||||||| ||||||| |||||||  |||||| ||||||||||| |||||    
T  11115044 actataaagtatctcaatttggtcccataactcttctgtcgtttaccattttggacctctccgttagttttt 11114973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 37 - 108
Target Start/End: Original strand, 13266216 - 13266287
Alignment:
Q  37 acaaaaactccacagttaagcatgcttgatttgtagcaattttaggatggatgacattttgggaagttttcc 108  Q
    |||| ||| |||||||||||| ||||||| ||  || ||||||||||||| |||| ||||||||||||||||    
T  13266216 acaagaaccccacagttaagcgtgcttgactttgagaaattttaggatgggtgaccttttgggaagttttcc 13266287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 307 - 378
Target Start/End: Original strand, 17319094 - 17319165
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||| ||||||| |||||||| | |||||||||||||| |||||||| |||||||| || |||||| |||||    
T  17319094 actataaagtgtttcaatttggttccataaatcttctggcgtttactattttggtcttcaccgttagttttt 17319165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 44471348 - 44471281
Alignment:
Q  24 ggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatggatgac 91  Q
    ||||||| |||| | || |||||||||||||||| ||||||||||| ||||||||| |||||| ||||    
T  44471348 ggtagctcattccataagaactccacagttaagcgtgcttgatttggagcaattttgggatgggtgac 44471281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 307 - 446
Target Start/End: Original strand, 47667230 - 47667369
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaaaatatattattcttaatataatttt 406  Q
    |||| |||||||||||||||| || ||||| |||||  |||||||||  | ||||||||| ||||| ||||||||  | ||   || || || | |||||    
T  47667230 actataaagtgtctcaatttggtctcataagtcttcctccgtttactaatatggtcctctgcgttagttttttaatgtctaaatttttttatgtgatttt 47667329  T
Q  407 aaccacttgattgcaggtctatagtatctaagagtgaacc 446  Q
    ||||| ||||||||| ||| || |||||||| ||||||||    
T  47667330 aaccatttgattgcatgtccattgtatctaatagtgaacc 47667369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 50814848 - 50814781
Alignment:
Q  24 ggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatggatgac 91  Q
    ||||||| |||| | || |||||||||||||||| ||||||| ||| ||||||||| |||||||||||    
T  50814848 ggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatggatgac 50814781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 381
Target Start/End: Complemental strand, 307869 - 307795
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaa 381  Q
    |||| ||||||||||||||||||||||||| |||||  || |||||| || ||||| ||||||||  ||||||||    
T  307869 actataaagtgtctcaatttgatcccataagtcttcctccatttactattgtggtcatctccgttggttttttaa 307795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 378
Target Start/End: Complemental strand, 31712565 - 31712499
Alignment:
Q  312 aaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    ||||||| ||||||||||||||||| |||||| ||||||||  |||||||| | |||||| ||||||    
T  31712565 aaagtgtttcaatttgatcccataagtcttcttccgtttaccattttggtcatttccgtttattttt 31712499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 105
Target Start/End: Complemental strand, 12692022 - 12691941
Alignment:
Q  24 ggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatggatgacattttgggaagttt 105  Q
    ||||||| |||| | || |||||||||||||||| ||||||| ||| ||||||||| |||||| |||| |  ||||||||||    
T  12692022 ggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctactgggaagttt 12691941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 307 - 368
Target Start/End: Complemental strand, 27410746 - 27410686
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctcc 368  Q
    |||| |||||||||||||||| ||| ||||||||||| ||||||||  ||||||||||||||    
T  27410746 actataaagtgtctcaatttggtcc-ataaatcttcttccgtttaccattttggtcctctcc 27410686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 313 - 378
Target Start/End: Complemental strand, 38419075 - 38419010
Alignment:
Q  313 aagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||||| |||||||| || ||||| |||||||||||||||| |||| ||| ||||||||| |||||    
T  38419075 aagtgtgtcaatttggtctcataagtcttctgccgtttactgttttagtcatctccgttagttttt 38419010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 307 - 372
Target Start/End: Original strand, 53400237 - 53400302
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| |||||||||||||||| ||| ||||||||| || |||||||  |||| |||||||||||||    
T  53400237 actataaagtgtctcaatttggtcctataaatcttatgtcgtttaccattttagtcctctccgtta 53400302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 312 - 372
Target Start/End: Complemental strand, 3217668 - 3217608
Alignment:
Q  312 aaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    ||||||| | ||||||||| |||||||||||||  ||||||| |||||||||| |||||||    
T  3217668 aaagtgttttaatttgatctcataaatcttctgttgtttactattttggtcctatccgtta 3217608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 307 - 399
Target Start/End: Original strand, 29686308 - 29686400
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaaaatatattattcttaata 399  Q
    |||| ||| |||||||| ||| |||| ||  |||| || ||||  |||||||||||||||||||||||||||| || |||| |||| ||||||    
T  29686308 actataaattgtctcaaattggtcccttatgtcttatgtcgttacctcttttggtcctctccgttaatttttttaattataatatttttaata 29686400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 307 - 379
Target Start/End: Complemental strand, 40146687 - 40146615
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaatttttt 379  Q
    |||| |||||||||||||||| |||||||| |||||| ||| |||||  | ||||| ||||||||| ||||||    
T  40146687 actataaagtgtctcaatttggtcccataagtcttcttccgattactaatgtggtcatctccgttagtttttt 40146615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 7678645 - 7678578
Alignment:
Q  24 ggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatggatgac 91  Q
    |||||||||||| | || |||||||||||||||  ||||||| ||| ||||||||| |||||| ||||    
T  7678645 ggtagcttattccataagaactccacagttaagtgtgcttgacttggagcaattttgggatgggtgac 7678578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 307 - 378
Target Start/End: Original strand, 15787004 - 15787075
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||| ||| |||||||||||| |||||||| | ||||||||||||   || || ||||||||||||||||||    
T  15787004 actataaactgtctcaatttggtcccataacttttctgccgtttatcattatgatcctctccgttaattttt 15787075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 91
Target Start/End: Original strand, 35871744 - 35871811
Alignment:
Q  24 ggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatggatgac 91  Q
    ||||||| |||| | || |||||||||||||||| ||||||| ||| ||||||||| |||||| ||||    
T  35871744 ggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgac 35871811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 307 - 378
Target Start/End: Complemental strand, 39592353 - 39592282
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||| |||||||||||| ||| |||  ||  ||||||| |||||||| ||||||| ||||||||||||||||    
T  39592353 actataaagtgtctcaaattggtccattatgtcttctgtcgtttactgttttggttctctccgttaattttt 39592282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 307 - 378
Target Start/End: Complemental strand, 47668661 - 47668590
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||| |||||||||||| ||| |||| || ||| ||||||||||| | ||||||||||||| |||| |||||    
T  47668661 actataaagtgtctcaaattggtcccttatatcatctgccgtttattgttttggtcctctctgttagttttt 47668590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 151 - 193
Target Start/End: Complemental strand, 24629333 - 24629291
Alignment:
Q  151 gtgttagtttatggggtcagttggcaaccctgaaagcagtctg 193  Q
    |||||||||| |||||||||| ||||| |||||||||||||||    
T  24629333 gtgttagtttgtggggtcagtcggcaatcctgaaagcagtctg 24629291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 313 - 427
Target Start/End: Complemental strand, 50531814 - 50531700
Alignment:
Q  313 aagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaaaatatattattcttaatataattttaaccac 412  Q
    ||||||||||||||| |||||||| |||| || |||||||| |||| ||| | || |||| | || |||  | || |||| || ||||||||| ||||      
T  50531814 aagtgtctcaatttggtcccataactcttttgtcgtttactattttagtcatttctgttagtattctaatgtctaatattttttatataatttcaaccgt 50531715  T
Q  413 ttgattgcaggtcta 427  Q
    |||||||||||||||    
T  50531714 ttgattgcaggtcta 50531700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 380
Target Start/End: Complemental strand, 10403481 - 10403408
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaatttttta 380  Q
    |||| ||||||| |||||||| || ||||||||||| | |||||| | ||| ||||||||| |||||| |||||    
T  10403481 actataaagtgtatcaatttggtctcataaatcttcagtcgtttattatttcggtcctctcggttaatatttta 10403408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 24628982 - 24628933
Alignment:
Q  42 aactccacagttaagcatgcttgatttgtagcaattttaggatggatgac 91  Q
    |||||||||||||||| ||||||| ||| ||||||||| |||||| ||||    
T  24628982 aactccacagttaagcgtgcttgacttggagcaattttgggatgggtgac 24628933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 352
Target Start/End: Complemental strand, 26393191 - 26393146
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttac 352  Q
    |||| |||||||||||||||| |||||||| ||||||| |||||||    
T  26393191 actataaagtgtctcaatttggtcccataactcttctgtcgtttac 26393146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 352
Target Start/End: Original strand, 29663694 - 29663739
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttac 352  Q
    |||| ||| |||||||||||| |||||||| |||||||||||||||    
T  29663694 actataaattgtctcaatttggtcccataactcttctgccgtttac 29663739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 372
Target Start/End: Original strand, 37559050 - 37559115
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| ||| |||||||||||| ||||||||| |||   ||||||||| |||||||| |||||||||    
T  37559050 actataaaatgtctcaatttggtcccataaaccttacaccgtttactattttggtcatctccgtta 37559115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 378
Target Start/End: Original strand, 44159143 - 44159208
Alignment:
Q  313 aagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||||| |||||||| | ||| || |||||||||||||| | |||||||| ||||||||| |||||    
T  44159143 aagtgtttcaatttggttccacaactcttctgccgtttattattttggtcatctccgttagttttt 44159208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 44470880 - 44470831
Alignment:
Q  42 aactccacagttaagcatgcttgatttgtagcaattttaggatggatgac 91  Q
    |||||||||||||||| ||||||| ||| ||||||||| |||||| ||||    
T  44470880 aactccacagttaagcgtgcttgacttggagcaattttgggatggttgac 44470831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 307 - 371
Target Start/End: Complemental strand, 21104374 - 21104310
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtt 371  Q
    |||| |||||||||||||||| || ||||  ||||||| |||||||  |||||||||| ||||||    
T  21104374 actataaagtgtctcaatttggtctcatatgtcttctgtcgtttaccattttggtcctttccgtt 21104310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 312 - 364
Target Start/End: Original strand, 26121927 - 26121979
Alignment:
Q  312 aaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcct 364  Q
    ||||||| ||||||||||||||||||||| ||| |||||| | ||||| ||||    
T  26121927 aaagtgtttcaatttgatcccataaatctcctgtcgtttagtattttgatcct 26121979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 402 - 450
Target Start/End: Complemental strand, 26631185 - 26631137
Alignment:
Q  402 attttaaccacttgattgcaggtctatagtatctaagagtgaaccatca 450  Q
    |||||||||||||||||||| |||||| |||| ||| |||||| |||||    
T  26631185 attttaaccacttgattgcatgtctattgtatttaacagtgaatcatca 26631137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 316 - 372
Target Start/End: Original strand, 29833433 - 29833489
Alignment:
Q  316 tgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||||||||||| |||| || ||||| || ||||  |||||||||||||||||||||    
T  29833433 tgtctcaatttggtcccttatatcttttgtcgttacctcttttggtcctctccgtta 29833489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 341 - 449
Target Start/End: Original strand, 39591027 - 39591135
Alignment:
Q  341 tctgccgtttactcttttggtcctctccgttaattttttaaaatatattattcttaatataattttaaccacttgattgcaggtctatagtatctaagag 440  Q
    |||| |||||||| |||| |||||| | |||| |||||| |  | || |||| ||||||| ||| |||||  ||||||||||||| ||||||| | | ||    
T  39591027 tctgtcgtttactgttttagtcctcgcagttagtttttttatgtctaatatttttaatatgattataaccgtttgattgcaggtccatagtatattacag 39591126  T
Q  441 tgaaccatc 449  Q
    |||||||||    
T  39591127 tgaaccatc 39591135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 406 - 454
Target Start/End: Original strand, 49895195 - 49895243
Alignment:
Q  406 taaccacttgattgcaggtctatagtatctaagagtgaaccatcaacac 454  Q
    |||||| |||||||||||||  | |||||||| ||||||||||||||||    
T  49895195 taaccatttgattgcaggtccgttgtatctaatagtgaaccatcaacac 49895243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 1e-39; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 320 - 493
Target Start/End: Complemental strand, 14171319 - 14171148
Alignment:
Q  320 tcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaaaatatattattcttaatataattttaaccacttgattg 419  Q
    |||||||| ||||||||||| |||| | |||||| ||||| || | ||| ||||||||||||  |||||||||||| |||| ||||||||||||||||||    
T  14171319 tcaatttggtcccataaatcatctgtcatttactattttgatcatttcctttaattttttaatgtatattattcttgatattattttaaccacttgattg 14171220  T
Q  420 caggtctatagtatctaagagtgaaccatcaacacttgannnnnnnacagttttcttcatcttctctcttcatc 493  Q
    |||||||||| ||| ||||||||||||||| ||||||||       ||||||||||||||||||||||||||||    
T  14171219 caggtctataatatataagagtgaaccatccacacttga--ttttaacagttttcttcatcttctctcttcatc 14171148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 307 - 379
Target Start/End: Original strand, 13641309 - 13641381
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaatttttt 379  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||| ||||||    
T  13641309 actataaagtgtctcaatttggtcccataaatcttctgccgtttactattttggtcatctccgttattttttt 13641381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 307 - 373
Target Start/End: Original strand, 3978096 - 3978162
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaa 373  Q
    |||| ||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||||    
T  3978096 actataaagtgtctcaatttgatcccataattcttctgtcgtttactattttggtcctctccgttaa 3978162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 307 - 372
Target Start/End: Complemental strand, 3979377 - 3979312
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| |||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||    
T  3979377 actataaagtgtctcaatttggtcccataattcttctgccgtttactattttggtcctctccgtta 3979312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 307 - 377
Target Start/End: Complemental strand, 36511395 - 36511325
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaatttt 377  Q
    |||| |||||||||||||||| |||||||||||||||| |||||||| |||||||| ||||||||| ||||    
T  36511395 actataaagtgtctcaatttggtcccataaatcttctgtcgtttactattttggtcatctccgttagtttt 36511325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 307 - 372
Target Start/End: Complemental strand, 26056211 - 26056146
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| |||||||||||||||| ||||||||||||| || |||||||| ||||||||||||||||||    
T  26056211 actataaagtgtctcaatttggtcccataaatcttttgtcgtttactattttggtcctctccgtta 26056146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 307 - 379
Target Start/End: Original strand, 47560191 - 47560263
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaatttttt 379  Q
    |||| ||||||| ||||||||||||  ||||| |||||||||||||| |||||||| ||||||||||||||||    
T  47560191 actataaagtgtttcaatttgatcctttaaatattctgccgtttactgttttggtcatctccgttaatttttt 47560263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 307 - 378
Target Start/End: Complemental strand, 19466269 - 19466198
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||| |||||||||||||||| |||||||||||||||| |||||||| || |||| |||||||||| |||||    
T  19466269 actataaagtgtctcaatttggtcccataaatcttctgtcgtttactattgtggttctctccgttagttttt 19466198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 307 - 378
Target Start/End: Original strand, 21277046 - 21277117
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||| ||||| |||||||||| ||||||||||||||||||||||||| ||||| |||||||| ||| |||||    
T  21277046 actataaagtatctcaatttggtcccataaatcttctgccgtttactattttgatcctctccattagttttt 21277117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 307 - 378
Target Start/End: Original strand, 36509863 - 36509934
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||| ||||||| |||||||| | ||||||||||||||||||||||| ||||||| |||||||||| |||||    
T  36509863 actataaagtgtttcaatttggttccataaatcttctgccgtttactattttggttctctccgttagttttt 36509934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 307 - 381
Target Start/End: Original strand, 9592290 - 9592364
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaa 381  Q
    |||| ||||||| |||||||||||||||||||||| || |||||||| ||||| || | ||||||||||||||||    
T  9592290 actataaagtgtttcaatttgatcccataaatcttttgtcgtttactattttgatcatttccgttaattttttaa 9592364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 307 - 372
Target Start/End: Complemental strand, 25787228 - 25787163
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| |||||||||||||||| || |||||||||| |||| |||||| ||||||||||||||||||    
T  25787228 actataaagtgtctcaatttggtctcataaatcttatgccatttactattttggtcctctccgtta 25787163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 307 - 372
Target Start/End: Complemental strand, 47136751 - 47136686
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| |||||||||||||||| |  |||||||||| ||||||||||| ||||||||||||||||||    
T  47136751 actataaagtgtctcaatttggtgtcataaatcttatgccgtttactattttggtcctctccgtta 47136686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 307 - 372
Target Start/End: Complemental strand, 47411512 - 47411447
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| |||||||||||||||| ||||||||||||| ||||||||||| ||||| | ||||||||||    
T  47411512 actataaagtgtctcaatttggtcccataaatcttatgccgtttactattttgattctctccgtta 47411447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 307 - 450
Target Start/End: Original strand, 26054949 - 26055092
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaaaatatattattcttaatataatttt 406  Q
    |||| ||||||| |||||||| | |||||||||||||| |||||||| ||||||||  || ||||| ||||||||  |  | ||||  | |||||||||     
T  26054949 actataaagtgtttcaatttggttccataaatcttctgtcgtttactattttggtctccttcgttagttttttaatgtcaaatatttatgatataatttc 26055048  T
Q  407 aaccacttgattgcaggtctatagtatctaagagtgaaccatca 450  Q
    ||||| | ||||||||||||||  |||  || ||||||||||||    
T  26055049 aaccattagattgcaggtctattatatacaatagtgaaccatca 26055092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 307 - 378
Target Start/End: Complemental strand, 51726908 - 51726837
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||| |||||||||||||||| | |||||||||||||| |||||||| |||| |||||| |||||| |||||    
T  51726908 actataaagtgtctcaatttggttccataaatcttctgtcgtttactattttagtcctcaccgttagttttt 51726837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 316 - 378
Target Start/End: Original strand, 40811256 - 40811318
Alignment:
Q  316 tgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    ||||||||||||||||||||| |||| ||||||||| | |||||||| ||||||||| |||||    
T  40811256 tgtctcaatttgatcccataactcttttgccgtttattattttggtcatctccgttagttttt 40811318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 307 - 381
Target Start/End: Original strand, 49139853 - 49139927
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaa 381  Q
    |||| |||||||||||||||| || ||||||||||| || ||||||| |||||||  ||||||||| ||||||||    
T  49139853 actataaagtgtctcaatttggtctcataaatcttccgcagtttactattttggtaatctccgttagttttttaa 49139927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 307 - 381
Target Start/End: Complemental strand, 50679885 - 50679811
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaa 381  Q
    |||| |||||||||||||||| |||||||| |||||  |||||||||  | ||||||||||||||| ||||||||    
T  50679885 actataaagtgtctcaatttggtcccataagtcttcctccgtttactaatatggtcctctccgttagttttttaa 50679811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 313 - 378
Target Start/End: Original strand, 22167837 - 22167902
Alignment:
Q  313 aagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||||| |||||||| ||||||||||||||||||||||| | ||||||| ||||| |||| |||||    
T  22167837 aagtgtttcaatttggtcccataaatcttctgccgtttattattttggttctctctgttagttttt 22167902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 307 - 372
Target Start/End: Original strand, 25786020 - 25786085
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| |||||||||||||||| ||||||||||||| || |||||| | ||||||||||||| ||||    
T  25786020 actataaagtgtctcaatttggtcccataaatcttatgtcgtttattattttggtcctctctgtta 25786085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 307 - 372
Target Start/End: Original strand, 35683107 - 35683172
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| |||||||||||||||| |||| ||  ||||||||||||  |||||||||||||||||||||    
T  35683107 actataaagtgtctcaatttggtcccttatgtcttctgccgttacctcttttggtcctctccgtta 35683172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 307 - 372
Target Start/End: Original strand, 47411036 - 47411101
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| |||||||||||||||| || |||||||||| || |||||||| |||||||| |||||||||    
T  47411036 actataaagtgtctcaatttggtctcataaatcttatgtcgtttactattttggtcatctccgtta 47411101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 307 - 371
Target Start/End: Complemental strand, 14071267 - 14071203
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtt 371  Q
    |||| |||||||||||||||| |||||||| ||||||| |||||||  |||||||||| ||||||    
T  14071267 actataaagtgtctcaatttggtcccataagtcttctgtcgtttaccattttggtcctttccgtt 14071203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 381
Target Start/End: Original strand, 13929347 - 13929421
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaa 381  Q
    |||| |||||||||||||||| |||| |||||||||| |||||||   | |||||||| |||||| |||||||||    
T  13929347 actataaagtgtctcaatttggtcccgtaaatcttcttccgtttatcatcttggtcctgtccgtttattttttaa 13929421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 381
Target Start/End: Original strand, 51725395 - 51725469
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaa 381  Q
    |||| |||||||||||||||||||| |||||  ||||||||||||   |||||||| | |||||| |||||||||    
T  51725395 actataaagtgtctcaatttgatcctataaaatttctgccgtttatcattttggtcatgtccgtttattttttaa 51725469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 307 - 372
Target Start/End: Complemental strand, 2238042 - 2237977
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| |||||||||||||||| |||| ||  ||||||| ||||  |||||||||||||||||||||    
T  2238042 actataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtcctctccgtta 2237977  T

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Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 307 - 372
Target Start/End: Original strand, 14390310 - 14390375
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| ||| |||||||||||| | |||||||||||||  |||||||  ||||||||||||||||||    
T  14390310 actataaaatgtctcaatttggttccataaatcttctttcgtttaccattttggtcctctccgtta 14390375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 307 - 372
Target Start/End: Original strand, 16217492 - 16217557
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| |||||||||||||||| ||| ||||||||| || | |||||| |||||||| |||||||||    
T  16217492 actataaagtgtctcaatttggtcctataaatcttatgtcatttactattttggtcatctccgtta 16217557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 307 - 372
Target Start/End: Complemental strand, 16218542 - 16218477
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| ||||| |||||||||| ||||||||||||| || |||||| | |||||||| |||||||||    
T  16218542 actataaagtatctcaatttggtcccataaatcttatgtcgtttaatattttggtcatctccgtta 16218477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 307 - 372
Target Start/End: Complemental strand, 48935174 - 48935109
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| |||||||||||||||| |||| ||  ||||||||||||  ||||||||||| |||||||||    
T  48935174 actataaagtgtctcaatttggtcccttatgtcttctgccgttacctcttttggtcatctccgtta 48935109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 307 - 447
Target Start/End: Original strand, 52741540 - 52741681
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaaaatatattattcttaatataatttt 406  Q
    |||| |||||||||||| |||||||| ||  ||||||| | |||| | |||||||||||||| ||| ||||||||  | || |||| ||||||| ||| |    
T  52741540 actataaagtgtctcaaattgatcccttatgtcttctgtcatttattgttttggtcctctccattagttttttaacttctagtatttttaatatgattat 52741639  T
Q  407 aaccacttgattg-caggtctatagtatctaagagtgaacca 447  Q
    ||||  |||||||  ||||| ||||||| | | |||||||||    
T  52741640 aaccgtttgattgttaggtccatagtatattatagtgaacca 52741681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 307 - 371
Target Start/End: Complemental strand, 13930739 - 13930675
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtt 371  Q
    |||| |||||||||||||||| |||||||| |||| || |||||||  |||||||||| ||||||    
T  13930739 actataaagtgtctcaatttggtcccataagtcttatgtcgtttaccattttggtcctttccgtt 13930675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 312 - 368
Target Start/End: Original strand, 19464657 - 19464713
Alignment:
Q  312 aaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctcc 368  Q
    ||||||| |||||||| | ||| ||||||||||||||||||| |||||||| |||||    
T  19464657 aaagtgtttcaatttggttccacaaatcttctgccgtttactattttggtcatctcc 19464713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 193
Target Start/End: Complemental strand, 20054565 - 20054397
Alignment:
Q  24 ggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatggatgacattttgggaagttttcccaaacaacaggcaag 123  Q
    ||||||| |||| | || |||||||||||||||| ||||||| ||| ||||||||| |||||| |||| |   |||||| ||||||    | |  || ||    
T  20054565 ggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaag-tttcccggtaagcgtgcgag 20054467  T
Q  124 tgaggataaaacacgctnnnnnnnctagtgttagtttatggggtcagttggcaaccctgaaagcagtctg 193  Q
    |||||| ||||||||||       || ||||| |||| |||||||||| ||||| |||||||||||||||    
T  20054466 tgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctg 20054397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 193
Target Start/End: Complemental strand, 20055021 - 20054853
Alignment:
Q  24 ggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatggatgacattttgggaagttttcccaaacaacaggcaag 123  Q
    ||||||| |||| | || |||||||||||||||| ||||||| ||| ||||||||| |||||| |||| |   |||||| ||||||    | |  || ||    
T  20055021 ggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaag-tttcccggtaagcgtgcgag 20054923  T
Q  124 tgaggataaaacacgctnnnnnnnctagtgttagtttatggggtcagttggcaaccctgaaagcagtctg 193  Q
    |||||| ||||||||||       || ||||| |||| |||||||||| ||||| |||||||||||||||    
T  20054922 tgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctg 20054853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 193
Target Start/End: Complemental strand, 20055477 - 20055309
Alignment:
Q  24 ggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatggatgacattttgggaagttttcccaaacaacaggcaag 123  Q
    ||||||| |||| | || |||||||||||||||| ||||||| ||| ||||||||| |||||| |||| |   |||||| ||||||    | |  || ||    
T  20055477 ggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaag-tttcccggtaagcgtgcgag 20055379  T
Q  124 tgaggataaaacacgctnnnnnnnctagtgttagtttatggggtcagttggcaaccctgaaagcagtctg 193  Q
    |||||| ||||||||||       || ||||| |||| |||||||||| ||||| |||||||||||||||    
T  20055378 tgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctg 20055309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 193
Target Start/End: Complemental strand, 20055933 - 20055765
Alignment:
Q  24 ggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatggatgacattttgggaagttttcccaaacaacaggcaag 123  Q
    ||||||| |||| | || |||||||||||||||| ||||||| ||| ||||||||| |||||| |||| |   |||||| ||||||    | |  || ||    
T  20055933 ggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaag-tttcccggtaagcgtgcgag 20055835  T
Q  124 tgaggataaaacacgctnnnnnnnctagtgttagtttatggggtcagttggcaaccctgaaagcagtctg 193  Q
    |||||| ||||||||||       || ||||| |||| |||||||||| ||||| |||||||||||||||    
T  20055834 tgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctg 20055765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 193
Target Start/End: Complemental strand, 20056389 - 20056221
Alignment:
Q  24 ggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatggatgacattttgggaagttttcccaaacaacaggcaag 123  Q
    ||||||| |||| | || |||||||||||||||| ||||||| ||| ||||||||| |||||| |||| |   |||||| ||||||    | |  || ||    
T  20056389 ggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaag-tttcccggtaagcgtgcgag 20056291  T
Q  124 tgaggataaaacacgctnnnnnnnctagtgttagtttatggggtcagttggcaaccctgaaagcagtctg 193  Q
    |||||| ||||||||||       || ||||| |||| |||||||||| ||||| |||||||||||||||    
T  20056290 tgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctg 20056221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 193
Target Start/End: Complemental strand, 20057292 - 20057124
Alignment:
Q  24 ggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatggatgacattttgggaagttttcccaaacaacaggcaag 123  Q
    ||||||| |||| | || |||||||||||||||| ||||||| ||| ||||||||| |||||| |||| |   |||||| ||||||    | |  || ||    
T  20057292 ggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaag-tttcccggtaagcgtgcgag 20057194  T
Q  124 tgaggataaaacacgctnnnnnnnctagtgttagtttatggggtcagttggcaaccctgaaagcagtctg 193  Q
    |||||| ||||||||||       || ||||| |||| |||||||||| ||||| |||||||||||||||    
T  20057193 tgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctg 20057124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 193
Target Start/End: Complemental strand, 20057748 - 20057580
Alignment:
Q  24 ggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatggatgacattttgggaagttttcccaaacaacaggcaag 123  Q
    ||||||| |||| | || |||||||||||||||| ||||||| ||| ||||||||| |||||| |||| |   |||||| ||||||    | |  || ||    
T  20057748 ggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaag-tttcccggtaagcgtgcgag 20057650  T
Q  124 tgaggataaaacacgctnnnnnnnctagtgttagtttatggggtcagttggcaaccctgaaagcagtctg 193  Q
    |||||| ||||||||||       || ||||| |||| |||||||||| ||||| |||||||||||||||    
T  20057649 tgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctg 20057580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 193
Target Start/End: Original strand, 38341023 - 38341191
Alignment:
Q  24 ggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatggatgacattttgggaagttttcccaaacaacaggcaag 123  Q
    ||||||| |||| | || |||| ||||||||||| ||||||| ||| ||||||||| |||||| |||| |  |||||||||| ||   | | |  || ||    
T  38341023 ggtagctcattccataagaacttcacagttaagcgtgcttgacttggagcaattttgggatgggtgacctactgggaagtttcccggta-agcgtgcgag 38341121  T
Q  124 tgaggataaaacacgctnnnnnnnctagtgttagtttatggggtcagttggcaaccctgaaagcagtctg 193  Q
    |||||| |||||||||        || ||||| ||||||||||||||| ||||| |||||||||||||||    
T  38341122 tgaggacaaaacacgcggaaaagactcgtgttggtttatggggtcagtcggcaatcctgaaagcagtctg 38341191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 307 - 379
Target Start/End: Complemental strand, 52181369 - 52181297
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaatttttt 379  Q
    |||| |||||||||||||||  || |||||||||| ||  ||||||| |||||||| ||||||||||| ||||    
T  52181369 actataaagtgtctcaatttagtctcataaatcttatgttgtttactattttggtcatctccgttaatatttt 52181297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 307 - 362
Target Start/End: Original strand, 14169671 - 14169726
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtc 362  Q
    |||| ||| |||||||||||| ||||||||||||| || |||||||| ||||||||    
T  14169671 actataaaatgtctcaatttggtcccataaatcttttgtcgtttactattttggtc 14169726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 313 - 372
Target Start/End: Complemental strand, 14765152 - 14765093
Alignment:
Q  313 aagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||||| |||||||| |||||||||| || ||| ||||||| ||| ||||||||||||||    
T  14765152 aagtgtgtcaatttggtcccataaattttttgcagtttactatttcggtcctctccgtta 14765093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 91
Target Start/End: Original strand, 52250660 - 52250727
Alignment:
Q  24 ggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatggatgac 91  Q
    ||||||| |||| | || |||||||||||||||| ||||||| ||| ||||||||| |||||| ||||    
T  52250660 ggtagctcattccataagaactccacagttaagcgtgcttgacttgaagcaattttgggatgggtgac 52250727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 91
Target Start/End: Original strand, 52250997 - 52251064
Alignment:
Q  24 ggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatggatgac 91  Q
    ||||||| |||| | || |||||||||||||||| ||||||| ||| ||||||||| |||||| ||||    
T  52250997 ggtagctcattccataagaactccacagttaagcgtgcttgacttgaagcaattttgggatgggtgac 52251064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 43 - 97
Target Start/End: Original strand, 8278093 - 8278147
Alignment:
Q  43 actccacagttaagcatgcttgatttgtagcaattttaggatggatgacattttg 97  Q
    ||||||||||||||| ||||||| ||| ||||||||| |||||| |||| |||||    
T  8278093 actccacagttaagcgtgcttgacttgaagcaattttgggatgggtgaccttttg 8278147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 372
Target Start/End: Original strand, 2236865 - 2236930
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| |||||||||||||||| |||| ||  ||||||| ||||  |||||||| ||||||||||||    
T  2236865 actataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttgatcctctccgtta 2236930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 16451944 - 16451895
Alignment:
Q  42 aactccacagttaagcatgcttgatttgtagcaattttaggatggatgac 91  Q
    |||||||||||||||| ||||||| ||| ||||||||| |||||| ||||    
T  16451944 aactccacagttaagcgtgcttgacttggagcaattttgggatgggtgac 16451895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 16461097 - 16461048
Alignment:
Q  42 aactccacagttaagcatgcttgatttgtagcaattttaggatggatgac 91  Q
    |||||||||||||||| ||||||| ||| ||||||||| |||||| ||||    
T  16461097 aactccacagttaagcgtgcttgacttggagcaattttgggatgggtgac 16461048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 372
Target Start/End: Complemental strand, 42248369 - 42248304
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| |||||||||||||||| ||| ||||||||| || |||||||  |||| ||||||| |||||    
T  42248369 actataaagtgtctcaatttggtcctataaatcttatgtcgtttaccattttagtcctcttcgtta 42248304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 46693746 - 46693697
Alignment:
Q  42 aactccacagttaagcatgcttgatttgtagcaattttaggatggatgac 91  Q
    |||||||||||||||| ||||||| ||| ||||||||| |||||| ||||    
T  46693746 aactccacagttaagcgtgcttgacttggagcaattttgggatgggtgac 46693697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 372
Target Start/End: Original strand, 48973250 - 48973315
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| ||||||||||||||||||||| ||  ||||||| ||||  ||||||||| |||||| ||||    
T  48973250 actataaagtgtctcaatttgatcccttatgtcttctgtcgttacctcttttggccctctctgtta 48973315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 406 - 454
Target Start/End: Original strand, 6048071 - 6048119
Alignment:
Q  406 taaccacttgattgcaggtctatagtatctaagagtgaaccatcaacac 454  Q
    |||||| ||||||| ||||| || |||||||| ||||||||||||||||    
T  6048071 taaccatttgattggaggtccattgtatctaatagtgaaccatcaacac 6048119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 402 - 450
Target Start/End: Complemental strand, 19194864 - 19194816
Alignment:
Q  402 attttaaccacttgattgcaggtctatagtatctaagagtgaaccatca 450  Q
    |||||||||||||||||||||||  || |||||||| |||| |||||||    
T  19194864 attttaaccacttgattgcaggttcattgtatctaatagtgcaccatca 19194816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 454
Target Start/End: Complemental strand, 34654373 - 34654257
Alignment:
Q  338 tcttctgccgtttactcttttggtcctctccgttaattttttaaaatatattattcttaatataattttaaccacttgattgcaggtctatagtatctaa 437  Q
    |||||| |||||  |||| |||||||||||||||||||||| ||    || |||| ||||||| |||| ||||| | ||||||||||| || ||||  ||    
T  34654373 tcttctaccgttacctctattggtcctctccgttaatttttaaatgactaatatttttaatatgatttcaaccattcgattgcaggtccattgtatacaa 34654274  T
Q  438 gagtgaaccatcaacac 454  Q
     | ||||||| ||||||    
T  34654273 caatgaaccaacaacac 34654257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 316 - 372
Target Start/End: Complemental strand, 35684258 - 35684202
Alignment:
Q  316 tgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||||||||||| |||| ||  ||||||| ||||  |||||||||||||||||||||    
T  35684258 tgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtcctctccgtta 35684202  T

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Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 356 - 424
Target Start/End: Complemental strand, 44978681 - 44978613
Alignment:
Q  356 tttggtcctctccgttaattttttaaaatatattattcttaatataattttaaccacttgattgcaggt 424  Q
    |||| |||| |||||||||||||| || |||| |||| ||||||| ||| |||||  ||||||||||||    
T  44978681 tttgatcctttccgttaatttttttaattataatatttttaatatgattataaccgtttgattgcaggt 44978613  T

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Target: chr2 (Bit Score: 72; Significance: 2e-32; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 320 - 509
Target Start/End: Original strand, 25569834 - 25570021
Alignment:
Q  320 tcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaaaatatattattcttaatataattttaaccacttgattg 419  Q
    |||||||| || ||||| |||||  ||||||| | |||||||  | |  |||| ||||||||  |||||||||||| |||| ||||||||||||||||||    
T  25569834 tcaatttggtcacataagtcttcctccgtttattgttttggttttttatgttagttttttaatgtatattattcttgatatcattttaaccacttgattg 25569933  T
Q  420 caggtctatagtatctaagagtgaaccatcaacacttgannnnnnnacagttttcttcatcttctctcttcatcatactatgcagaactt 509  Q
    || ||||||||||| |||||||||||||||| |||||||       | ||||||||||||||||||||||||||||||||  ||||||||    
T  25569934 catgtctatagtatttaagagtgaaccatcagcacttga--tttttatagttttcttcatcttctctcttcatcatactacacagaactt 25570021  T

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Target: chr2; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 307 - 378
Target Start/End: Original strand, 23177726 - 23177797
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||| |||||    
T  23177726 actataaagtgtctcaatttggtcccataaatcttctgccgtttaccattttggtcctctccgttagttttt 23177797  T

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Target: chr2; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 307 - 378
Target Start/End: Original strand, 23588983 - 23589054
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||| |||||    
T  23588983 actataaagtgtctcaatttggtcccataaatcttctgccgtttaccattttggtcctctccgttagttttt 23589054  T

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Target: chr2; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 307 - 381
Target Start/End: Original strand, 6706978 - 6707052
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaa 381  Q
    |||| |||||||||||||||| | ||||||||||||| ||||||||| ||||||||| |||||||| ||||||||    
T  6706978 actataaagtgtctcaatttggttccataaatcttcttccgtttactattttggtcccctccgttagttttttaa 6707052  T

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Target: chr2; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 307 - 379
Target Start/End: Complemental strand, 1625040 - 1624968
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaatttttt 379  Q
    |||| |||||||||||||||| ||| ||||||||| |||| |||||| |||||||| ||||||||||||||||    
T  1625040 actataaagtgtctcaatttggtcctataaatcttatgccatttactattttggtcttctccgttaatttttt 1624968  T

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Target: chr2; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 307 - 378
Target Start/End: Original strand, 14509261 - 14509332
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||| ||||||| | |||| | |||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  14509261 actataaagtgttttaattcggtcccataaatcttctgtcgtttactattttggtcctctccgttaattttt 14509332  T

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Target: chr2; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 532 - 575
Target Start/End: Original strand, 25570084 - 25570127
Alignment:
Q  532 acatcaaatcctaaaatcttaaacacatcaacaacaccttcttt 575  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  25570084 acatcaaatcctaaaatcttaaacacatcaacaacaccttcttt 25570127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 307 - 372
Target Start/End: Original strand, 2581855 - 2581920
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| |||||||||||||||| |||||||||||||  |||||||||| | ||||||||||||||||    
T  2581855 actataaagtgtctcaatttggtcccataaatcttacgccgtttactatcttggtcctctccgtta 2581920  T

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Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 307 - 372
Target Start/End: Original strand, 12852938 - 12853003
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| |||||||||||||||| |||||||||||||||  |||||||| |||||||| |||||||||    
T  12852938 actataaagtgtctcaatttggtcccataaatcttctatcgtttactattttggtcatctccgtta 12853003  T

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Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 314 - 381
Target Start/End: Complemental strand, 40174821 - 40174754
Alignment:
Q  314 agtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaa 381  Q
    ||||| |||||||| ||||||||||||||||  ||||||| |||||||| ||||||||| ||||||||    
T  40174821 agtgtttcaatttggtcccataaatcttctgttgtttactattttggtcatctccgttagttttttaa 40174754  T

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Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 307 - 372
Target Start/End: Original strand, 2305592 - 2305657
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| |||||||||||||||| |||| ||  ||||||||||||  |||||||||||||||||||||    
T  2305592 actataaagtgtctcaatttggtcccttatgtcttctgccgttacctcttttggtcctctccgtta 2305657  T

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Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 307 - 372
Target Start/End: Original strand, 4829517 - 4829582
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| ||| ||||||||||||||| |||||||||| || |||||||| ||||||||||||| ||||    
T  4829517 actataaaatgtctcaatttgatctcataaatcttatgtcgtttactattttggtcctctctgtta 4829582  T

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Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 307 - 372
Target Start/End: Original strand, 42027245 - 42027310
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||||||| |||||||||||| |||||||||| |||||| |||||||  ||||||||| |||||||    
T  42027245 actacaaaatgtctcaatttggtcccataaattttctgctgtttactactttggtcctttccgtta 42027310  T

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Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 108
Target Start/End: Original strand, 8256643 - 8256727
Alignment:
Q  24 ggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatggatgacattttgggaagttttcc 108  Q
    ||||||| |||| | || |||||||||||||||| ||||||| ||| ||||||||| |||||| |||| |  |||||||||||||    
T  8256643 ggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctgctgggaagttttcc 8256727  T

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Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 307 - 379
Target Start/End: Complemental strand, 35801109 - 35801037
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaatttttt 379  Q
    |||| ||||||| |||||||| |||| ||| ||||||||| |||||   ||||||||||||||||||||||||    
T  35801109 actataaagtgtttcaatttggtcccctaactcttctgccatttaccactttggtcctctccgttaatttttt 35801037  T

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Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 307 - 378
Target Start/End: Original strand, 7037018 - 7037089
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||| ||||||| |||||||| |||||||| |||||||||||||||  |||||||| | |||||| ||||||    
T  7037018 actataaagtgtttcaatttggtcccataagtcttctgccgtttaccattttggtcatttccgtttattttt 7037089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 312 - 371
Target Start/End: Complemental strand, 12959764 - 12959705
Alignment:
Q  312 aaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtt 371  Q
    |||||||||||||||  ||| ||||||||||||||||||||  ||||| |||||||||||    
T  12959764 aaagtgtctcaatttagtccgataaatcttctgccgtttacctttttgatcctctccgtt 12959705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 24 - 91
Target Start/End: Original strand, 41754406 - 41754473
Alignment:
Q  24 ggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatggatgac 91  Q
    ||||||| |||| | || |||||||||||||||| ||||||| ||| ||||||||| |||||||||||    
T  41754406 ggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatggatgac 41754473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 312 - 379
Target Start/End: Original strand, 42246648 - 42246715
Alignment:
Q  312 aaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaatttttt 379  Q
    ||||||| ||||||||||||||||| |||| | ||||||||| |||||||||| | ||||| ||||||    
T  42246648 aaagtgtttcaatttgatcccataactcttttaccgtttactattttggtccttttcgttagtttttt 42246715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 381
Target Start/End: Complemental strand, 10368449 - 10368375
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaa 381  Q
    |||| ||||||||||||||||||||||||||| |||| |||||||   |||||||| | ||||||  ||||||||    
T  10368449 actataaagtgtctcaatttgatcccataaattttcttccgtttatcattttggtcatgtccgtttgttttttaa 10368375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 91
Target Start/End: Original strand, 33771136 - 33771185
Alignment:
Q  42 aactccacagttaagcatgcttgatttgtagcaattttaggatggatgac 91  Q
    |||||||||||||||||||||||| ||| ||||||||| |||||| ||||    
T  33771136 aactccacagttaagcatgcttgacttggagcaattttgggatgggtgac 33771185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 312 - 372
Target Start/End: Complemental strand, 2306720 - 2306660
Alignment:
Q  312 aaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||||||||||||||| |||  ||  ||||||||||||  |||||||||||||||||||||    
T  2306720 aaagtgtctcaatttggtccattatgtcttctgccgttacctcttttggtcctctccgtta 2306660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 313 - 373
Target Start/End: Complemental strand, 14510567 - 14510507
Alignment:
Q  313 aagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaa 373  Q
    ||||||||||||||| ||| |||| |||||||||||||||| |||| ||| ||| ||||||    
T  14510567 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcatcttcgttaa 14510507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 84
Target Start/End: Complemental strand, 32377745 - 32377685
Alignment:
Q  24 ggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggat 84  Q
    ||||||| |||| | || |||||||||||||||||||||||| ||| ||||||||| ||||    
T  32377745 ggtagctcattccaaaagaactccacagttaagcatgcttgacttggagcaattttgggat 32377685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 91
Target Start/End: Original strand, 11388304 - 11388371
Alignment:
Q  24 ggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatggatgac 91  Q
    ||||||| |||| | || |||||||||||||||| ||||||| ||| ||||||||| |||||| ||||    
T  11388304 ggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgac 11388371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 307 - 361
Target Start/End: Original strand, 11386676 - 11386730
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggt 361  Q
    |||| ||||||| |||||||||||||||||| ||||| ||||||||  |||||||    
T  11386676 actataaagtgtttcaatttgatcccataaaccttctaccgtttaccattttggt 11386730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 307 - 345
Target Start/End: Complemental strand, 12854168 - 12854130
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgc 345  Q
    |||| |||||||||||||||| |||||||||||||||||    
T  12854168 actataaagtgtctcaatttggtcccataaatcttctgc 12854130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 524 - 562
Target Start/End: Original strand, 25570052 - 25570090
Alignment:
Q  524 caaaaaatacatcaaatcctaaaatcttaaacacatcaa 562  Q
    ||||||| |||||||||| ||||||||||||||||||||    
T  25570052 caaaaaacacatcaaatcttaaaatcttaaacacatcaa 25570090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 312 - 378
Target Start/End: Complemental strand, 28109928 - 28109862
Alignment:
Q  312 aaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    ||||| |||||||||| |||||||| | |||||  ||||||  |||||||||||||||||| |||||    
T  28109928 aaagtatctcaatttggtcccataacttttctgtagtttaccattttggtcctctccgttatttttt 28109862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 372
Target Start/End: Original strand, 15650493 - 15650558
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| |||||||||||||||| |  | |||||||| || |||||||| |||||||| |||||||||    
T  15650493 actataaagtgtctcaatttggtatcttaaatcttatgtcgtttactattttggtcatctccgtta 15650558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 25338008 - 25337959
Alignment:
Q  42 aactccacagttaagcatgcttgatttgtagcaattttaggatggatgac 91  Q
    |||||||||||||||| ||||||| ||| ||||||||| |||||| ||||    
T  25338008 aactccacagttaagcgtgcttgacttggagcaattttgggatgggtgac 25337959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 372
Target Start/End: Complemental strand, 29424676 - 29424611
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| ||||||| |||||||| |||| | ||| |||||||||||| | ||||||||||||| ||||    
T  29424676 actataaagtgtttcaatttggtcccttgaatattctgccgtttattgttttggtcctctctgtta 29424611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 29804799 - 29804860
Alignment:
Q  24 ggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatg 85  Q
    ||||||| |||| | || |||||||||||||||| ||||||| ||| ||||||||| |||||    
T  29804799 ggtagctcattccataagaactccacagttaagcgtgcttgacttgaagcaattttgggatg 29804860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 372
Target Start/End: Original strand, 35799564 - 35799629
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| |||||||||||||||| || ||||| | |||| ||||||||   |||||||||||||||||    
T  35799564 actataaagtgtctcaatttggtctcataacttttcttccgtttacctctttggtcctctccgtta 35799629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 312 - 372
Target Start/End: Original strand, 4628939 - 4628999
Alignment:
Q  312 aaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    ||||| ||||||||||||||||||  |||| |||||||  ||||||||||| | |||||||    
T  4628939 aaagtatctcaatttgatcccatatgtcttttgccgttacctcttttggtcatatccgtta 4628999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 307 - 371
Target Start/End: Original strand, 10367291 - 10367355
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtt 371  Q
    |||| |||||||||||||||  || ||||| |||||||||||||||  |||| ||| ||||||||    
T  10367291 actataaagtgtctcaatttagtctcataagtcttctgccgtttacctttttagtcgtctccgtt 10367355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 329 - 381
Target Start/End: Complemental strand, 23178924 - 23178872
Alignment:
Q  329 tcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaa 381  Q
    |||||||||||||| | |||||| | |||||||| ||||||||| ||||||||    
T  23178924 tcccataaatcttcagtcgtttattattttggtcatctccgttagttttttaa 23178872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 329 - 381
Target Start/End: Complemental strand, 23590181 - 23590129
Alignment:
Q  329 tcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaa 381  Q
    |||||||||||||| | |||||| | |||||||| ||||||||| ||||||||    
T  23590181 tcccataaatcttcagtcgtttattattttggtcatctccgttagttttttaa 23590129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 307 - 371
Target Start/End: Complemental strand, 37869104 - 37869040
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtt 371  Q
    |||| |||||||||||||||  || ||||| ||||||| |||||||  |||||||| ||||||||    
T  37869104 actataaagtgtctcaatttagtctcataagtcttctgtcgtttacctttttggtcttctccgtt 37869040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 1e-24; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 307 - 381
Target Start/End: Original strand, 37274939 - 37275013
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaa 381  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  37274939 actataaagtgtctcaatttgttcccataaatcttctgccgtttactattttggtcctctccgttagttttttaa 37275013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 307 - 453
Target Start/End: Complemental strand, 36940097 - 36939951
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaaaatatattattcttaatataatttt 406  Q
    |||| ||||||| |||||||| |  |||||||||||||||||||||| |||||||| |||||||||||||||||| || || || | || ||||  |||     
T  36940097 actataaagtgtttcaatttggtatcataaatcttctgccgtttactattttggtcatctccgttaattttttaatatctaataattttgatatggtttc 36939998  T
Q  407 aaccacttgattgcaggtctatagtatctaagagtgaaccatcaaca 453  Q
    ||||| | ||||||||||| || |||| ||| ||||||||| |||||    
T  36939997 aaccattcgattgcaggtccattgtatataatagtgaaccaccaaca 36939951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 307 - 372
Target Start/End: Original strand, 36070230 - 36070295
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  36070230 actataaagtgtctcaatttgatcccataaatcttctgccgtttactattttggtcctccccgtta 36070295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 312 - 372
Target Start/End: Complemental strand, 31625443 - 31625383
Alignment:
Q  312 aaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||    
T  31625443 aaagtgtctcaatttggtcccataaatcttttgccgtttactattttggtcctctccgtta 31625383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 307 - 378
Target Start/End: Complemental strand, 13367114 - 13367043
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||| ||||||| | |||||| ||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  13367114 actataaagtgttttaatttggtcccataaatcttctgccgtttactattttggtcctctccgttagttttt 13367043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 307 - 372
Target Start/End: Complemental strand, 16363876 - 16363811
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| ||||| |||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||    
T  16363876 actataaagtatctcaatttgatcccataaatcgtctgctgtttactattttggtcctctccgtta 16363811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 307 - 368
Target Start/End: Complemental strand, 38591071 - 38591010
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctcc 368  Q
    |||| |||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||||    
T  38591071 actataaagtgtctcaatttggtcccataaatcttatgccgtttactattttggtcctctcc 38591010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 320 - 378
Target Start/End: Original strand, 117113 - 117171
Alignment:
Q  320 tcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    ||||||||||||||||||||||||| |||||| | |||||||||||||||||| |||||    
T  117113 tcaatttgatcccataaatcttctgtcgtttattgttttggtcctctccgttagttttt 117171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 307 - 381
Target Start/End: Original strand, 24068382 - 24068456
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaa 381  Q
    |||| |||||||||||||||| |||||||| |||||  |||||||||  ||||||||||||||||| ||||||||    
T  24068382 actataaagtgtctcaatttggtcccataagtcttcctccgtttactaatttggtcctctccgttagttttttaa 24068456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 307 - 424
Target Start/End: Complemental strand, 10053808 - 10053691
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaaaatatattattcttaatataatttt 406  Q
    |||| |||||||||||| ||| |||| ||  |||| || ||||  |||||||||| ||||||||||||||||| || |||| |||| ||||||| ||| |    
T  10053808 actataaagtgtctcaagttggtcccttatgtcttatgtcgttacctcttttggttctctccgttaatttttttaattataatatttttaatatgattat 10053709  T
Q  407 aaccacttgattgcaggt 424  Q
    ||||  ||||||||||||    
T  10053708 aaccgtttgattgcaggt 10053691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 190
Target Start/End: Complemental strand, 22549024 - 22548859
Alignment:
Q  24 ggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatggatgacattttgggaagttttcccaaacaacaggcaag 123  Q
    ||||||| |||| | ||||||||||||||||||| ||||||| ||| ||||||||| |||||| |||| |   |||||| |||||||   | |  || ||    
T  22549024 ggtagctcattccataaaaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaag-tttcccagtaagcgtgcgag 22548926  T
Q  124 tgaggataaaacacgctnnnnnnnctagtgttagtttatggggtcagttggcaaccctgaaagcagt 190  Q
    |||||||||||||||||       || ||||| |||| |||||||||| ||||| ||||||||||||    
T  22548925 tgaggataaaacacgctgaacagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagt 22548859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 317 - 433
Target Start/End: Original strand, 39323849 - 39323965
Alignment:
Q  317 gtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaaaatatattattcttaatataattttaaccacttga 416  Q
    ||||||| |||||| | ||  |||||| |||||  ||||||||||||||||||||| ||||| || || || |||| || ||||||||||||||| | ||    
T  39323849 gtctcaaattgatctcttatgtcttcttccgttacctcttttggtcctctccgttagtttttcaagatctaatatttttgatataattttaaccattaga 39323948  T
Q  417 ttgcaggtctatagtat 433  Q
    ||||| |||||| ||||    
T  39323949 ttgcatgtctattgtat 39323965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 307 - 378
Target Start/End: Original strand, 7486129 - 7486200
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||| ||||||  |||||||| ||||||||||||| ||| ||||||| |||||||||||||||||| |||||    
T  7486129 actataaagtgcttcaatttggtcccataaatcttttgctgtttactattttggtcctctccgttagttttt 7486200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 307 - 370
Target Start/End: Complemental strand, 24069510 - 24069447
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgt 370  Q
    |||| |||||||||||||||| |||||||| |||||||||||||||  |||||||||| |||||    
T  24069510 actataaagtgtctcaatttggtcccataactcttctgccgtttaccattttggtcctttccgt 24069447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 307 - 378
Target Start/End: Complemental strand, 37276307 - 37276236
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||| |||||||||||||||| ||||||||||||| ||||||||| | | ||||||||||| |||| |||||    
T  37276307 actataaagtgtctcaatttggtcccataaatcttttgccgtttattatattggtcctctctgttagttttt 37276236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 316 - 378
Target Start/End: Original strand, 35943969 - 35944031
Alignment:
Q  316 tgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||||||||||| ||||||||||||| ||| ||||||| |||||||| ||||||||| |||||    
T  35943969 tgtctcaatttggtcccataaatcttatgcagtttactattttggtcatctccgttagttttt 35944031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 312 - 378
Target Start/End: Complemental strand, 39546736 - 39546670
Alignment:
Q  312 aaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||||||||||||||| |||||||||| || ||||||||||  |||||||| ||||||||| |||||    
T  39546736 aaagtgtctcaatttggtcccataaatattatgccgtttaccgttttggtcatctccgttagttttt 39546670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 307 - 371
Target Start/End: Original strand, 29738343 - 29738407
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtt 371  Q
    |||| |||||||||||||||  || ||||| |||||||||||||||  |||||||||||||||||    
T  29738343 actataaagtgtctcaatttagtctcataagtcttctgccgtttacctttttggtcctctccgtt 29738407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 307 - 378
Target Start/End: Original strand, 19913544 - 19913615
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||| ||||||| |||||||| |||||||| |||||||| |||||   |||||||||||||||||| |||||    
T  19913544 actataaagtgtttcaatttggtcccataagtcttctgcggtttatcattttggtcctctccgttagttttt 19913615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 425
Target Start/End: Complemental strand, 19914970 - 19914852
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaaaatatattattcttaatataatttt 406  Q
    |||| ||||||||||||||||  |||||||||||||| ||||||||  |||||||| | ||||||  ||| ||||  | || |||| || |||| ||| |    
T  19914970 actataaagtgtctcaatttgtacccataaatcttctaccgtttaccattttggtcatatccgtttgtttattaatgtctaatatttttgatattattgt 19914871  T
Q  407 aaccacttgattgcaggtc 425  Q
     |||| |||||||||||||    
T  19914870 gaccatttgattgcaggtc 19914852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 381
Target Start/End: Complemental strand, 29739707 - 29739633
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaa 381  Q
    |||| |||||||||||||||| |||||||||| |||| ||||||||  |||||||| | ||||||  ||||||||    
T  29739707 actataaagtgtctcaatttggtcccataaattttcttccgtttaccattttggtcatgtccgtttgttttttaa 29739633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 428
Target Start/End: Original strand, 34616181 - 34616307
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttct-----gccgtttactcttttggtcctctccgttaattttttaaaatatattattcttaatata 401  Q
    |||| |||||||||||||||| ||||||||||||| |     | |||||||  |||||||| | ||||||| ||||||||  | || |||| |||||||     
T  34616181 actataaagtgtctcaatttggtcccataaatcttttcttttgtcgtttaccattttggtcatttccgttagttttttaatgtttaatatttttaatatg 34616280  T
Q  402 attttaaccacttgattgcaggtctat 428  Q
    |||| ||||| | ||||||||||||||    
T  34616281 atttcaaccattcgattgcaggtctat 34616307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 332 - 378
Target Start/End: Original strand, 36938758 - 36938804
Alignment:
Q  332 cataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||||||||||||||||||||| |||||||| |||| ||||||||||    
T  36938758 cataaatcttctgccgtttactattttggtcttctctgttaattttt 36938804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 313 - 366
Target Start/End: Complemental strand, 2421351 - 2421298
Alignment:
Q  313 aagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctct 366  Q
    |||||| |||||||| ||||| ||||||||||||||||| | ||||||||||||    
T  2421351 aagtgtttcaatttggtcccagaaatcttctgccgtttattattttggtcctct 2421298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 313 - 378
Target Start/End: Original strand, 8095404 - 8095469
Alignment:
Q  313 aagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    ||||||||||||||| |||||| | |||| || |||||||| |||||||||| ||||||| |||||    
T  8095404 aagtgtctcaatttggtcccattactcttttgtcgtttactattttggtcctttccgttagttttt 8095469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 313 - 378
Target Start/End: Original strand, 20308663 - 20308728
Alignment:
Q  313 aagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    ||||||||||||||| || ||||| ||||||| |||||||| |||||||| | ||| |||||||||    
T  20308663 aagtgtctcaatttggtctcataactcttctgtcgtttactattttggtcatttccattaattttt 20308728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 313 - 378
Target Start/End: Original strand, 21095296 - 21095361
Alignment:
Q  313 aagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    ||||||||||||||| || ||||| ||||||| |||||||| |||||||| | ||| |||||||||    
T  21095296 aagtgtctcaatttggtctcataactcttctgtcgtttactattttggtcatttccattaattttt 21095361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 190
Target Start/End: Complemental strand, 22548578 - 22548413
Alignment:
Q  24 ggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatggatgacattttgggaagttttcccaaacaacaggcaag 123  Q
    ||||||| |||| | || |||||||||||||||| ||||||| ||| ||||||||| |||||| |||| |   |||||| |||||||   | |  || ||    
T  22548578 ggtagctcattccataataactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaag-tttcccagtaagcgtgcgag 22548480  T
Q  124 tgaggataaaacacgctnnnnnnnctagtgttagtttatggggtcagttggcaaccctgaaagcagt 190  Q
    |||||| ||||||||||       || ||||| |||| |||||||||| ||||| ||||||||||||    
T  22548479 tgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagt 22548413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 307 - 372
Target Start/End: Original strand, 31623958 - 31624023
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| ||||||| |||||||| ||||||||||||| || |||||| | |||| |||||||||||||    
T  31623958 actataaagtgtttcaatttggtcccataaatcttatgtcgtttattattttagtcctctccgtta 31624023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 313 - 378
Target Start/End: Complemental strand, 41522746 - 41522681
Alignment:
Q  313 aagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||||| |||||||| ||| |||| |||||||||||||||| |||| ||||| ||||| |||||||    
T  41522746 aagtgtgtcaatttggtcctataagtcttctgccgtttactgttttagtcctttccgtcaattttt 41522681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 307 - 372
Target Start/End: Complemental strand, 41867980 - 41867915
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| |||||||||||||||| |||||||||| || ||||||||  | |||| |||||||||||||    
T  41867980 actataaagtgtctcaatttggtcccataaattttatgccgttttttattttagtcctctccgtta 41867915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 307 - 372
Target Start/End: Original strand, 43275802 - 43275867
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| |||||||||||||||  |||||||| |||| ||||||||| | ||||||||||| ||||||    
T  43275802 actataaagtgtctcaatttagtcccataactcttatgccgtttattattttggtcctcaccgtta 43275867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 312 - 372
Target Start/End: Complemental strand, 45385853 - 45385793
Alignment:
Q  312 aaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    ||||||| |||||||||||| ||||||||| || |||||||  |||| |||||||||||||    
T  45385853 aaagtgtttcaatttgatcctataaatcttatgtcgtttaccattttagtcctctccgtta 45385793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 10844644 - 10844577
Alignment:
Q  24 ggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatggatgac 91  Q
    ||||||| |||| | || |||||||||||||||| ||||||| ||| ||||||||| |||||| ||||    
T  10844644 ggtagctcattccataagaactccacagttaagcgtgcttgacttgaagcaattttgggatgggtgac 10844577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 12827283 - 12827216
Alignment:
Q  24 ggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatggatgac 91  Q
    ||||||| |||| | || |||||||||||||||| ||||||| ||| ||||||||| |||||| ||||    
T  12827283 ggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgac 12827216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 91
Target Start/End: Original strand, 25144889 - 25144956
Alignment:
Q  24 ggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatggatgac 91  Q
    ||||||| |||| | || |||||||||||||||| ||||||| ||| ||||||||| |||||| ||||    
T  25144889 ggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgac 25144956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 307 - 378
Target Start/End: Original strand, 37472455 - 37472526
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||| |||||||||||||||| |||||||| |||| || |||||||  |||||||||| ||| || ||||||    
T  37472455 actataaagtgtctcaatttggtcccataagtcttttgtcgtttaccattttggtcctttccatttattttt 37472526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 307 - 362
Target Start/End: Complemental strand, 43277985 - 43277930
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtc 362  Q
    |||| ||| |||||||||||| |||| |||||||| ||||||||||| ||||||||    
T  43277985 actataaaatgtctcaatttggtcccgtaaatcttatgccgtttactattttggtc 43277930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 360 - 450
Target Start/End: Original strand, 2075480 - 2075570
Alignment:
Q  360 gtcctctccgttaattttttaaaatatattattcttaatataattttaaccacttgattgcaggtctatagtatctaagagtgaaccatca 450  Q
    |||||| |||||||||||||||  |||| |||   | || | |||||||||||||||||||||||  || |||||||| |||| |||||||    
T  2075480 gtcctcaccgttaattttttaatgtataatatgtatgatgtgattttaaccacttgattgcaggttcattgtatctaatagtgcaccatca 2075570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 324 - 378
Target Start/End: Original strand, 8395064 - 8395118
Alignment:
Q  324 tttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||| |||||||| |||||| ||||||||  |||||||||||||||||| |||||    
T  8395064 tttggtcccataattcttcttccgtttaccattttggtcctctccgttagttttt 8395118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 312 - 418
Target Start/End: Complemental strand, 45195863 - 45195757
Alignment:
Q  312 aaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaaaatatattattcttaatataattttaacca 411  Q
    |||||||||||||||  |||  || |||||||||||||  || |||||||| || | ||||||||||| |  | || |||| ||||||||||| |||||     
T  45195863 aaagtgtctcaatttagtccattatatcttctgccgttatctattttggtcatcacagttaattttttgatgtttaatatttttaatataattataaccg 45195764  T
Q  412 cttgatt 418  Q
    |||||||    
T  45195763 cttgatt 45195757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 372
Target Start/End: Complemental strand, 1570270 - 1570205
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| |||||||||||||||| ||   ||||| || ||||||||||| |||||||| |||||||||    
T  1570270 actataaagtgtctcaatttggtctattaaattttatgccgtttactattttggtcatctccgtta 1570205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 378
Target Start/End: Original strand, 21961885 - 21961946
Alignment:
Q  317 gtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    ||||||| |||||||| ||  |||||| |||||  ||||||||||||||||||||| |||||    
T  21961885 gtctcaaattgatcccttatgtcttcttccgttatctcttttggtcctctccgttagttttt 21961946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 27022349 - 27022300
Alignment:
Q  42 aactccacagttaagcatgcttgatttgtagcaattttaggatggatgac 91  Q
    |||||||||||||||| ||||||| ||| ||||||||| |||||| ||||    
T  27022349 aactccacagttaagcgtgcttgacttggagcaattttgggatgggtgac 27022300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 316 - 352
Target Start/End: Original strand, 3237478 - 3237514
Alignment:
Q  316 tgtctcaatttgatcccataaatcttctgccgtttac 352  Q
    |||||||||||| |||||||||| |||||||||||||    
T  3237478 tgtctcaatttggtcccataaatattctgccgtttac 3237514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 320 - 372
Target Start/End: Original strand, 4807431 - 4807483
Alignment:
Q  320 tcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||||||| |||||||||||||  |||||||| | ||||||| ||||||||||    
T  4807431 tcaatttggtcccataaatcttacgccgtttattattttggttctctccgtta 4807483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 312 - 372
Target Start/End: Complemental strand, 27750680 - 27750620
Alignment:
Q  312 aaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    ||||| |||||||||| ||||||||||||| |   ||||||| |||||||| |||||||||    
T  27750680 aaagtatctcaatttggtcccataaatcttatattgtttactattttggtcttctccgtta 27750620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 402 - 450
Target Start/End: Original strand, 31844518 - 31844566
Alignment:
Q  402 attttaaccacttgattgcaggtctatagtatctaagagtgaaccatca 450  Q
    |||||||||||||||||||| |||||| |||  ||| ||||||||||||    
T  31844518 attttaaccacttgattgcatgtctattgtaattaacagtgaaccatca 31844566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 307 - 359
Target Start/End: Original strand, 38589872 - 38589924
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttg 359  Q
    |||| |||||| ||||||||| ||||||||||||| || |||||||| |||||    
T  38589872 actataaagtggctcaatttggtcccataaatcttatgtcgtttactattttg 38589924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 378
Target Start/End: Complemental strand, 44103329 - 44103289
Alignment:
Q  338 tcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||||| |||||| ||||||||||||||||||||| |||||    
T  44103329 tcttcttccgtttcctcttttggtcctctccgttagttttt 44103289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 314 - 378
Target Start/End: Original strand, 44606198 - 44606262
Alignment:
Q  314 agtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    ||||| |||||||| ||||||||||||||| | ||||| | ||||| |||||||| ||| |||||    
T  44606198 agtgtttcaatttggtcccataaatcttcttctgtttattattttgatcctctccattagttttt 44606262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 7e-23; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 307 - 450
Target Start/End: Complemental strand, 32980516 - 32980373
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaaaatatattattcttaatataatttt 406  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||| ||||||||| ||||||||  | ||  ||| || |||| ||||     
T  32980516 actacaaagtgtctcaatttggtcctataaatcttctgccgtttactattttggtcatctccgttagttttttaatttctaacatttttgatatgatttc 32980417  T
Q  407 aaccacttgattgcaggtctatagtatctaagagtgaaccatca 450  Q
    ||||| | ||||||||||| ||  |||  || ||||||||||||    
T  32980416 aaccattcgattgcaggtccattatatacaatagtgaaccatca 32980373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 307 - 379
Target Start/End: Complemental strand, 47855402 - 47855330
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaatttttt 379  Q
    |||| |||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||| ||||||    
T  47855402 actataaagtgtctcaatttggtcctataaatcttctgccgtttactattttggtcctctccgttattttttt 47855330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 313 - 378
Target Start/End: Original strand, 23559877 - 23559942
Alignment:
Q  313 aagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||| |||||    
T  23559877 aagtgtctcaatttgatcccataattcttctgtcgtttactattttggtcctctccgttagttttt 23559942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 316 - 381
Target Start/End: Complemental strand, 19253057 - 19252992
Alignment:
Q  316 tgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaa 381  Q
    ||||||||||||||||||||||| |||||||||||||  |||||||||| |||||| |||||||||    
T  19253057 tgtctcaatttgatcccataaatattctgccgtttaccattttggtcctgtccgtttattttttaa 19252992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 317 - 378
Target Start/End: Original strand, 25583176 - 25583237
Alignment:
Q  317 gtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    ||||||||||| |||||||| |||||||||||||||| ||||||||||||| ||||||||||    
T  25583176 gtctcaatttggtcccataagtcttctgccgtttactattttggtcctctctgttaattttt 25583237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 307 - 372
Target Start/End: Original strand, 29536766 - 29536831
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| |||||||||||||||| |||||||||||||||  |||||||| ||||||||||||||||||    
T  29536766 actataaagtgtctcaatttggtcccataaatcttctttcgtttactattttggtcctctccgtta 29536831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 307 - 372
Target Start/End: Original strand, 42632758 - 42632823
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| |||||||||||||||||||||||||||||| || |||||||| |||| |||||||||||||    
T  42632758 actataaagtgtctcaatttgatcccataaatcttatgtcgtttactattttagtcctctccgtta 42632823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 307 - 372
Target Start/End: Complemental strand, 54654030 - 54653965
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| |||||||||||||||| |||||||| ||||||| |||||||| ||||||||||||||||||    
T  54654030 actataaagtgtctcaatttggtcccataattcttctgtcgtttactattttggtcctctccgtta 54653965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 307 - 378
Target Start/End: Original strand, 8371272 - 8371343
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||| ||| |||||||||||| | ||||||||||||||| ||||||| |||||||||||||||||| |||||    
T  8371272 actataaaatgtctcaatttggttccataaatcttctgcagtttactattttggtcctctccgttagttttt 8371343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 307 - 378
Target Start/End: Original strand, 32979140 - 32979211
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||| ||||||||||||||||||||||||||| ||||||  ||  ||||||||||||||||||||| |||||    
T  32979140 actataaagtgtctcaatttgatcccataaattttctgcaattacctcttttggtcctctccgttagttttt 32979211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 307 - 374
Target Start/End: Complemental strand, 47808170 - 47808103
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaat 374  Q
    |||| |||||||||||||||| || ||||||||||||| ||||| || ||||||||||||||||||||    
T  47808170 actataaagtgtctcaatttggtctcataaatcttctgtcgtttgctattttggtcctctccgttaat 47808103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 307 - 381
Target Start/End: Complemental strand, 11220722 - 11220648
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaa 381  Q
    |||| |||||||||||||||| ||| |||||||||||| |||||||| ||||||||| |||||||  ||||||||    
T  11220722 actataaagtgtctcaatttggtcctataaatcttctgtcgtttactattttggtcccctccgtttgttttttaa 11220648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 312 - 372
Target Start/End: Original strand, 47806875 - 47806934
Alignment:
Q  312 aaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||||||||||||||||||| ||||||||||||| ||||||  ||||||||||||||||||    
T  47806875 aaagtgtctcaatttgatcctataaatcttctgctgtttac-attttggtcctctccgtta 47806934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 329 - 379
Target Start/End: Complemental strand, 29537184 - 29537134
Alignment:
Q  329 tcccataaatcttctgccgtttactcttttggtcctctccgttaatttttt 379  Q
    ||||||||||||||||||||||||  |||||||||||||||||| ||||||    
T  29537184 tcccataaatcttctgccgtttacaattttggtcctctccgttagtttttt 29537134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 307 - 372
Target Start/End: Original strand, 11219482 - 11219547
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| |||||||||||||||| || ||| | |||||||||||||||| |||||||| |||||||||    
T  11219482 actataaagtgtctcaatttggtctcatgagtcttctgccgtttactattttggtcatctccgtta 11219547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 307 - 372
Target Start/End: Original strand, 41386182 - 41386247
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| |||||||||||||||| | |||||||||||  | |||||||| ||||||||||||||||||    
T  41386182 actataaagtgtctcaatttggttccataaatcttacgacgtttactattttggtcctctccgtta 41386247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 307 - 372
Target Start/End: Complemental strand, 51825685 - 51825620
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| ||||||| |||||||| |||||||||||||||| |||||||| |||||||| | |||||||    
T  51825685 actataaagtgtttcaatttggtcccataaatcttctgtcgtttactattttggtcatatccgtta 51825620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 307 - 379
Target Start/End: Original strand, 7820442 - 7820514
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaatttttt 379  Q
    |||| ||||||| ||||||||  ||||||||| || || |||||||| |||||||||||||||||| ||||||    
T  7820442 actataaagtgtttcaatttggacccataaattttatgtcgtttactgttttggtcctctccgttagtttttt 7820514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 307 - 379
Target Start/End: Complemental strand, 10987717 - 10987645
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaatttttt 379  Q
    |||| |||||||||||||||| |||||||||| || ||||||||  | ||||||||||||| |||||| ||||    
T  10987717 actataaagtgtctcaatttggtcccataaattttatgccgttttttattttggtcctctctgttaatatttt 10987645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 317 - 381
Target Start/End: Complemental strand, 25585887 - 25585823
Alignment:
Q  317 gtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaa 381  Q
    ||||||||||| || ||||||||||||| |||||||| |||| ||| ||||||||| ||||||||    
T  25585887 gtctcaatttggtctcataaatcttctgtcgtttactattttagtcatctccgttagttttttaa 25585823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 307 - 351
Target Start/End: Complemental strand, 51401415 - 51401371
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgttta 351  Q
    |||| |||||||||||||||| |||||||||||||||||||||||    
T  51401415 actataaagtgtctcaatttggtcccataaatcttctgccgttta 51401371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 367 - 450
Target Start/End: Original strand, 21515375 - 21515458
Alignment:
Q  367 ccgttaattttttaaaatatattattcttaatataattttaaccacttgattgcaggtctatagtatctaagagtgaaccatca 450  Q
    |||||||||||||||  |||| |||   |||| | |||||||||||||||||||||||| || |||||||| |||| |||||||    
T  21515375 ccgttaattttttaatgtataatatgtataatgtgattttaaccacttgattgcaggtccattgtatctaatagtgcaccatca 21515458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 307 - 378
Target Start/End: Complemental strand, 26798970 - 26798899
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||| ||| |||||||||||| |||||||| |||||  ||||||||  |||||||||||||||||| |||||    
T  26798970 actataaaatgtctcaatttggtcccataattcttcctccgtttaccattttggtcctctccgttagttttt 26798899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 307 - 442
Target Start/End: Original strand, 43345371 - 43345506
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaaaatatattattcttaatataatttt 406  Q
    |||| ||| ||| |||||||| |||||||||||||||  |||||||  |||||||  ||||||||| ||||||||  | || |||| || |||| |||      
T  43345371 actataaaatgtttcaatttggtcccataaatcttctctcgtttaccattttggttttctccgttagttttttaatgtttaatatttttgatatgattcc 43345470  T
Q  407 aaccacttgattgcaggtctatagtatctaagagtg 442  Q
    ||||| | ||||||||||||||  ||| ||||||||    
T  43345471 aaccattcgattgcaggtctattatatttaagagtg 43345506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 307 - 446
Target Start/End: Complemental strand, 47767015 - 47766876
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaaaatatattattcttaatataatttt 406  Q
    |||| |||||||||||||||| |||||||| |||||  |||||||||  | | ||||||| ||||| ||||||||  | ||   || || || | |||||    
T  47767015 actataaagtgtctcaatttggtcccataagtcttcctccgtttactaatgtcgtcctctgcgttagttttttaatgtctaaatttttttatgtgatttt 47766916  T
Q  407 aaccacttgattgcaggtctatagtatctaagagtgaacc 446  Q
    ||||| ||||||||| ||| || |||||||| ||||||||    
T  47766915 aaccatttgattgcatgtccattgtatctaatagtgaacc 47766876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 307 - 454
Target Start/End: Original strand, 48252985 - 48253132
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaaaatatattattcttaatataatttt 406  Q
    |||| |||||||||||||||| |||||||| |||||  |||||||||  | | ||| ||||||||| ||||||||  | ||   || || || | |||||    
T  48252985 actataaagtgtctcaatttggtcccataagtcttcctccgtttactaatgtagtcatctccgttagttttttaatgtctaaattttttgatgtgatttt 48253084  T
Q  407 aaccacttgattgcaggtctatagtatctaagagtgaaccatcaacac 454  Q
    ||||| ||||||||| ||| || |||||||| |||||||  |||||||    
T  48253085 aaccatttgattgcatgtccattgtatctaatagtgaactgtcaacac 48253132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 307 - 378
Target Start/End: Original strand, 53808370 - 53808441
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||| ||||||||||||| || ||||||||||||| || |||||||| |||||||| ||||| ||| |||||    
T  53808370 actataaagtgtctcaatctggtcccataaatcttatgtcgtttactattttggtcatctccattagttttt 53808441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 322 - 372
Target Start/End: Original strand, 2124096 - 2124146
Alignment:
Q  322 aatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||||| ||||||||||||| ||||||||||| |||||||| |||||||||    
T  2124096 aatttggtcccataaatcttatgccgtttactattttggtcatctccgtta 2124146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 425
Target Start/End: Complemental strand, 8372680 - 8372562
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaaaatatattattcttaatataatttt 406  Q
    |||| |||||||||||||||| |||||||||||  |  | ||||||| ||||||||  |||||||| ||||||||  | || |||| || |||| ||||     
T  8372680 actataaagtgtctcaatttggtcccataaatccacaacagtttactattttggtcacctccgttagttttttaatgtttaatatttttgatatgatttc 8372581  T
Q  407 aaccacttgattgcaggtc 425  Q
    ||||| | |||||||||||    
T  8372580 aaccattcgattgcaggtc 8372562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 193
Target Start/End: Original strand, 14820289 - 14820439
Alignment:
Q  42 aactccacagttaagcatgcttgatttgtagcaattttaggatggatgacattttgggaagttttcccaaacaacaggcaagtgaggataaaacacgctn 141  Q
    |||||||||||||||| ||||||| ||| | ||||||| |||||| |||| | | || |||||| ||   | | || ||||||||||| ||||||||||     
T  14820289 aactccacagttaagcgtgcttgacttggaacaattttgggatgggtgacctatcggaaagtttcccggta-agcatgcaagtgaggacaaaacacgctg 14820387  T
Q  142 nnnnnnctagtgttagtttatggggtcagttggcaaccctgaaagcagtctg 193  Q
          || ||||| |||| |||||||||| ||||| |||||||||||||||    
T  14820388 aaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctg 14820439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 433
Target Start/End: Original strand, 17345363 - 17345488
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaaaatatattattcttaatataatttt 406  Q
    |||| ||||| |||||||||| | || |||||||||| | |||  || |||||||||||||||||| ||||||||  | || |||| ||||||| ||||     
T  17345363 actaaaaagtatctcaatttggttccttaaatcttcttctgttacct-ttttggtcctctccgttagttttttaatgtctaatatttttaatatgatttg 17345461  T
Q  407 aaccacttgattgcaggtctatagtat 433  Q
    ||||| | ||||||| |||||| ||||    
T  17345462 aaccattcgattgcatgtctattgtat 17345488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 377
Target Start/End: Original strand, 19622057 - 19622127
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaatttt 377  Q
    |||| |||||||||||||||  || ||||||||||||||  ||||||  ||||||||||||||||| ||||    
T  19622057 actataaagtgtctcaatttagtctcataaatcttctgctatttactggtttggtcctctccgttagtttt 19622127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 314 - 372
Target Start/End: Complemental strand, 42633943 - 42633885
Alignment:
Q  314 agtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||||||||||||| ||||||||||||| || |||||| | ||||||||||||| ||||    
T  42633943 agtgtctcaatttggtcccataaatcttatgtcgtttattattttggtcctctctgtta 42633885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 333 - 379
Target Start/End: Original strand, 47854565 - 47854611
Alignment:
Q  333 ataaatcttctgccgtttactcttttggtcctctccgttaatttttt 379  Q
    ||||||||||| ||||||||| |||||||||||||||||| ||||||    
T  47854565 ataaatcttcttccgtttactattttggtcctctccgttagtttttt 47854611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 307 - 372
Target Start/End: Original strand, 32973191 - 32973256
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| |||||||||||||||| |||| ||  ||||||||||||  ||||||| |||||||||||||    
T  32973191 actataaagtgtctcaatttggtcccttatgtcttctgccgttacctctttttgtcctctccgtta 32973256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 307 - 372
Target Start/End: Complemental strand, 32974287 - 32974222
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| |||||||||||||||| |||| ||  ||||||||||||  ||||||||||| |||||||||    
T  32974287 actataaagtgtctcaatttggtcccttatgtcttctgccgttacctcttttggtcatctccgtta 32974222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 307 - 372
Target Start/End: Complemental strand, 41387497 - 41387432
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| ||| |||||||||||| ||||||||| |||   ||||||||| ||||||||||||||||||    
T  41387497 actataaaatgtctcaatttggtcccataaaccttacaccgtttactattttggtcctctccgtta 41387432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 307 - 372
Target Start/End: Complemental strand, 43103360 - 43103295
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||||||| | |||||||||| |  ||||||| |||||||||||||| |||||||||| |||||||    
T  43103360 actacaaaatatctcaatttggtttcataaattttctgccgtttactattttggtcctttccgtta 43103295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 307 - 372
Target Start/End: Complemental strand, 48035388 - 48035323
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| |||||||||||||||| |||| ||  |||| |||||||  |||||||||||||||||||||    
T  48035388 actataaagtgtctcaatttggtcccttatgtcttatgccgttacctcttttggtcctctccgtta 48035323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 50347857 - 50347930
Alignment:
Q  18 ctttctggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatggatgac 91  Q
    |||| |||||||| |||| | || |||||||||||||||| ||||||| ||| ||||||||| |||||| ||||    
T  50347857 ctttttggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgac 50347930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 307 - 372
Target Start/End: Original strand, 53047949 - 53048014
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| |||||||||||||||| |||| ||  ||||||| ||||  |||||||||||||||||||||    
T  53047949 actataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtcctctccgtta 53048014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 307 - 372
Target Start/End: Complemental strand, 53049101 - 53049036
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| |||||||||||||||| |||| ||  ||||||| ||||  |||||||||||||||||||||    
T  53049101 actataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtcctctccgtta 53049036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 108
Target Start/End: Complemental strand, 31284305 - 31284221
Alignment:
Q  24 ggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatggatgacattttgggaagttttcc 108  Q
    ||||||| |||| | || |||||||||||||||| ||||||| ||| ||||||||| |||||| |||| |   ||||||||||||    
T  31284305 ggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctgccgggaagttttcc 31284221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 316 - 379
Target Start/End: Complemental strand, 13078006 - 13077943
Alignment:
Q  316 tgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaatttttt 379  Q
    ||||| |||||| ||||||||||||| || |||||||| |||||| ||||| ||||||| ||||    
T  13078006 tgtcttaatttggtcccataaatcttatgtcgtttactattttggacctcttcgttaatatttt 13077943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 13150583 - 13150516
Alignment:
Q  24 ggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatggatgac 91  Q
    ||||||| |||| | || |||||||||||||||| ||||||| ||| ||||||||| |||||| ||||    
T  13150583 ggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgac 13150516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 307 - 378
Target Start/End: Complemental strand, 17350166 - 17350095
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||| |||||||||||||||| |||| ||  |||||| | |||  ||||||||||||||||||||| |||||    
T  17350166 actataaagtgtctcaatttggtcccttatgtcttctcctgttacctcttttggtcctctccgttagttttt 17350095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 313 - 372
Target Start/End: Original strand, 36626789 - 36626848
Alignment:
Q  313 aagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||||| |||||||| |||| |||||||| || |||||||| |||||||||||| |||||    
T  36626789 aagtgtttcaatttggtcccttaaatcttatgtcgtttactgttttggtcctcttcgtta 36626848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 312 - 371
Target Start/End: Original strand, 43101951 - 43102010
Alignment:
Q  312 aaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtt 371  Q
    |||||||||||||||| |||||||| ||||||| || ||||| ||||| || ||||||||    
T  43101951 aaagtgtctcaatttggtcccataattcttctgtcgcttactattttgatcatctccgtt 43102010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 360 - 450
Target Start/End: Complemental strand, 143186 - 143096
Alignment:
Q  360 gtcctctccgttaattttttaaaatatattattcttaatataattttaaccacttgattgcaggtctatagtatctaagagtgaaccatca 450  Q
    |||||| |||||||||||||||  |||| |||   | || | |||||||||||||||||||||||  || |||||||| |||| |||||||    
T  143186 gtcctcaccgttaattttttaatgtataatatgtatgatgtgattttaaccacttgattgcaggttcattgtatctaatagtgcaccatca 143096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 24 - 86
Target Start/End: Original strand, 28561863 - 28561925
Alignment:
Q  24 ggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatgg 86  Q
    ||||||| |||| | || |||||||||||||||| ||||||| ||| ||||||||| ||||||    
T  28561863 ggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgg 28561925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 32386762 - 32386696
Alignment:
Q  25 gtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatggatgac 91  Q
    |||||| |||| | || |||||||||||||||| ||||||| ||| ||||||||| |||||| ||||    
T  32386762 gtagctaattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgac 32386696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 313 - 379
Target Start/End: Original strand, 48866199 - 48866265
Alignment:
Q  313 aagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaatttttt 379  Q
    |||||| |||||||| ||| |||| |||||| |||||||||  | ||||||||||||||| ||||||    
T  48866199 aagtgtgtcaatttggtcctataagtcttcttccgtttactaatatggtcctctccgttagtttttt 48866265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 11180045 - 11179996
Alignment:
Q  42 aactccacagttaagcatgcttgatttgtagcaattttaggatggatgac 91  Q
    |||||||||||||||| ||||||| ||| ||||||||| |||||| ||||    
T  11180045 aactccacagttaagcgtgcttgacttggagcaattttgggatgggtgac 11179996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 362
Target Start/End: Original strand, 21127983 - 21128032
Alignment:
Q  313 aagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtc 362  Q
    |||||| |||||||| |||||||| |||||||||||||||  ||||||||    
T  21127983 aagtgtgtcaatttggtcccataactcttctgccgtttaccattttggtc 21128032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 32227232 - 32227183
Alignment:
Q  42 aactccacagttaagcatgcttgatttgtagcaattttaggatggatgac 91  Q
    |||||||||||||||| ||||||| ||| ||||||||| |||||| ||||    
T  32227232 aactccacagttaagcgtgcttgacttggagcaattttgggatgggtgac 32227183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 91
Target Start/End: Original strand, 32227635 - 32227684
Alignment:
Q  42 aactccacagttaagcatgcttgatttgtagcaattttaggatggatgac 91  Q
    |||||||||||||||| ||||||| ||| ||||||||| |||||| ||||    
T  32227635 aactccacagttaagcgtgcttgacttggagcaattttgggatgggtgac 32227684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 372
Target Start/End: Original strand, 39287522 - 39287587
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| |||||||||||||||| |||| ||  | ||||| ||||  |||||||||||||||||||||    
T  39287522 actataaagtgtctcaatttggtcccttatgttttctgtcgttacctcttttggtcctctccgtta 39287587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 41474122 - 41474183
Alignment:
Q  32 attctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatggatgacat 93  Q
    |||||| |||||||||||||| |||| ||||||| ||| | ||||||| |||||| ||||||    
T  41474122 attctataaaaactccacagtcaagcgtgcttgacttggaacaattttgggatgggtgacat 41474183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 454
Target Start/End: Complemental strand, 45422147 - 45422082
Alignment:
Q  389 tattcttaatataattttaaccacttgattgcaggtctatagtatctaagagtgaaccatcaacac 454  Q
    ||||||| |||| || ||||||| |||||||||||||||| ||||| ||  |||||||| ||||||    
T  45422147 tattcttgatatgatattaaccatttgattgcaggtctattgtatcaaaccgtgaaccaccaacac 45422082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 364
Target Start/End: Original strand, 54752668 - 54752725
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcct 364  Q
    |||| |||||||||||||||| |||  || ||||| ||||||||||| ||||||||||    
T  54752668 actataaagtgtctcaatttggtcctgtatatcttatgccgtttactattttggtcct 54752725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 312 - 372
Target Start/End: Original strand, 11481958 - 11482018
Alignment:
Q  312 aaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||||||||||||||| |||| ||  |||| |||||||  ||||||||||||| |||||||    
T  11481958 aaagtgtctcaatttggtcccttatgtcttttgccgttacctcttttggtcctatccgtta 11482018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 307 - 371
Target Start/End: Complemental strand, 49122066 - 49122002
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtt 371  Q
    |||| |||||||||||||||| || ||||| | |||||||||||||  |||||||| | ||||||    
T  49122066 actataaagtgtctcaatttggtctcataagttttctgccgtttaccattttggtcttttccgtt 49122002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 307 - 379
Target Start/End: Complemental strand, 49334401 - 49334329
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaatttttt 379  Q
    |||| ||| ||||||||| || ||| ||||||||||| ||||||||| ||||| || |||| |||| ||||||    
T  49334401 actataaattgtctcaatatggtccgataaatcttctaccgtttactattttgatcatctctgttagtttttt 49334329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 307 - 371
Target Start/End: Original strand, 51400267 - 51400331
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtt 371  Q
    |||| |||||||||||||||  |||||||||| ||| ||||| |||  |||||||||| ||||||    
T  51400267 actataaagtgtctcaatttagtcccataaattttcagccgtataccattttggtcctttccgtt 51400331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 1e-21; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 370 - 458
Target Start/End: Original strand, 27897807 - 27897896
Alignment:
Q  370 ttaattttttaaaatatattattcttaatataattttaaccacttgattgcaggtctatagtatct-aagagtgaaccatcaacacttga 458  Q
    ||||||||||||  |||||||||||| |||| |||||||||||||||||||||||||||| ||| | |||||||||||||| ||||||||    
T  27897807 ttaattttttaatgtatattattcttgatatcattttaaccacttgattgcaggtctataatatttaaagagtgaaccatcgacacttga 27897896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 314 - 381
Target Start/End: Complemental strand, 13446715 - 13446648
Alignment:
Q  314 agtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaa 381  Q
    |||||||||||||| ||||||||||||||||||||||| | | |||||||||||||||| ||||||||    
T  13446715 agtgtctcaatttggtcccataaatcttctgccgtttattatattggtcctctccgttagttttttaa 13446648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 307 - 433
Target Start/End: Complemental strand, 40926583 - 40926457
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaaaatatattattcttaatataatttt 406  Q
    |||| |||||||||||||||| ||| |||||| |||| ||||||||  ||||||||||||||||||| |||||||  | || |||| ||||||| ||| |    
T  40926583 actataaagtgtctcaatttggtcctataaattttctaccgtttaccgttttggtcctctccgttaactttttaatgtctaatatttttaatatgattat 40926484  T
Q  407 aaccacttgattgcaggtctatagtat 433  Q
    ||||  ||||||  ||||| |||||||    
T  40926483 aaccgtttgatttaaggtccatagtat 40926457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 307 - 372
Target Start/End: Complemental strand, 22746384 - 22746319
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| |||||||||||||||| ||||||||||||| ||||||||||| ||||| ||||||||||||    
T  22746384 actataaagtgtctcaatttggtcccataaatcttgtgccgtttactattttgatcctctccgtta 22746319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 307 - 372
Target Start/End: Complemental strand, 46674998 - 46674933
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| |||||||||| ||||| ||||||||||||| ||||||||||| ||||||||||||||||||    
T  46674998 actataaagtgtctcgatttggtcccataaatcttttgccgtttactattttggtcctctccgtta 46674933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 312 - 372
Target Start/End: Original strand, 19278410 - 19278470
Alignment:
Q  312 aaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||||||||||||||| |||||||| |||||||||||||||| |||||||||||| |||||    
T  19278410 aaagtgtctcaatttggtcccataattcttctgccgtttactattttggtcctcttcgtta 19278470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 307 - 371
Target Start/End: Complemental strand, 46458777 - 46458713
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtt 371  Q
    |||| |||||||||||||||| ||||||||||||||| ||||||||  |||||||||||||||||    
T  46458777 actataaagtgtctcaatttggtcccataaatcttcttccgtttaccattttggtcctctccgtt 46458713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 317 - 378
Target Start/End: Original strand, 43930381 - 43930442
Alignment:
Q  317 gtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    ||||||||||| ||| |||||||||||| |||||||| ||||||||||||| ||||||||||    
T  43930381 gtctcaatttggtcctataaatcttctgtcgtttactattttggtcctctctgttaattttt 43930442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 307 - 379
Target Start/End: Original strand, 22744798 - 22744870
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaatttttt 379  Q
    |||| ||||||| |||||||| ||| ||||||||| ||||||||||| |||||||| ||||||||||| ||||    
T  22744798 actataaagtgtttcaatttggtcctataaatcttatgccgtttactattttggtcttctccgttaatatttt 22744870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 316 - 372
Target Start/End: Complemental strand, 36703005 - 36702949
Alignment:
Q  316 tgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||||||||||| |||||||||| |||||||||||||| |||||||||| |||||||    
T  36703005 tgtctcaatttggtcccataaatattctgccgtttactattttggtcctttccgtta 36702949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 307 - 379
Target Start/End: Original strand, 47163205 - 47163277
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaatttttt 379  Q
    |||| |||||| || |||||| ||||||||||||| | ||||||||| |||||||||||||||||| ||||||    
T  47163205 actataaagtgccttaatttggtcccataaatctttttccgtttactattttggtcctctccgttagtttttt 47163277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 307 - 378
Target Start/End: Original strand, 4857253 - 4857324
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||| ||| |||||| ||||| ||||| ||||||||||||||||||| |||| ||||||||||||| |||||    
T  4857253 actataaaatgtctcgatttggtcccacaaatcttctgccgtttactgttttagtcctctccgttagttttt 4857324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 42 - 137
Target Start/End: Complemental strand, 5406599 - 5406504
Alignment:
Q  42 aactccacagttaagcatgcttgatttgtagcaattttaggatggatgacattttgggaagttttcccaaacaacaggcaagtgaggataaaacac 137  Q
    |||||||||||||||| ||||||| ||  ||||||||| ||||||||||| || ||| ||||||||| ||| |||  || |||||||| |||||||    
T  5406599 aactccacagttaagcgtgcttgactttgagcaattttgggatggatgactttctggaaagttttccgaaaaaacgtgcgagtgaggacaaaacac 5406504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 307 - 446
Target Start/End: Complemental strand, 28326454 - 28326315
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaaaatatattattcttaatataatttt 406  Q
    |||| |||||||||||||||| | | |||| |||||  ||||||||| || ||||||||||||||| ||||||||  | ||   || ||||||| |||||    
T  28326454 actataaagtgtctcaatttggttctataagtcttcctccgtttactattgtggtcctctccgttagttttttaatgtctaaattttttaatatgatttt 28326355  T
Q  407 aaccacttgattgcaggtctatagtatctaagagtgaacc 446  Q
    ||||| ||||||||| ||| ||  ||| ||| ||||||||    
T  28326354 aaccatttgattgcatgtccattatatttaatagtgaacc 28326315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 307 - 378
Target Start/End: Original strand, 38406070 - 38406141
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||| ||||||||||||  || | |||||||||||||| |||||||| |||||||||| |||||||||||||    
T  38406070 actataaagtgtctcaaactggttccataaatcttctgacgtttactgttttggtcctttccgttaattttt 38406141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 307 - 425
Target Start/End: Original strand, 14107884 - 14108002
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaaaatatattattcttaatataatttt 406  Q
    |||| ||||||||||||  || |||| || |||||||| |||| ||  |||||||||||||||||| |||||| |  | || |||| ||||||||||| |    
T  14107884 actataaagtgtctcaaagtggtcccttatatcttctgtcgttcaccgttttggtcctctccgttagttttttgatgtctaatatttttaatataattat 14107983  T
Q  407 aaccacttgattgcaggtc 425  Q
    ||||  |||||||||||||    
T  14107984 aaccgtttgattgcaggtc 14108002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 307 - 425
Target Start/End: Original strand, 14417841 - 14417959
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaaaatatattattcttaatataatttt 406  Q
    |||| ||||||||||||  || |||| || |||||||| |||| ||  |||||||||||||||||| |||||| |  | || |||| ||||||||||| |    
T  14417841 actataaagtgtctcaaagtggtcccttatatcttctgtcgttcaccgttttggtcctctccgttagttttttgatgtctaatatttttaatataattat 14417940  T
Q  407 aaccacttgattgcaggtc 425  Q
    ||||  |||||||||||||    
T  14417941 aaccgtttgattgcaggtc 14417959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 307 - 381
Target Start/End: Complemental strand, 24873661 - 24873587
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaa 381  Q
    |||| |||||||||||||||| |||||||| |||||||||||||||  |||||||| | ||||||  ||||||||    
T  24873661 actataaagtgtctcaatttggtcccataagtcttctgccgtttaccattttggtcatttccgtttgttttttaa 24873587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 312 - 378
Target Start/End: Original strand, 26406182 - 26406248
Alignment:
Q  312 aaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    ||||||||||||||||||| ||||| ||||||||||||||   |||||||| ||||||||| |||||    
T  26406182 aaagtgtctcaatttgatctcataactcttctgccgtttaacattttggtcatctccgttatttttt 26406248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 307 - 372
Target Start/End: Complemental strand, 19279676 - 19279611
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| |||||||||||||||| |||||||||| || || |||||||| |||||||||| |||||||    
T  19279676 actataaagtgtctcaatttggtcccataaattttttgtcgtttactattttggtcctttccgtta 19279611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 24 - 105
Target Start/End: Original strand, 28495971 - 28496052
Alignment:
Q  24 ggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatggatgacattttgggaagttt 105  Q
    ||||||| |||| | || |||||||||||||||| ||||||| ||| ||||||||| |||||| |||| | |||||||||||    
T  28495971 ggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctattgggaagttt 28496052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 307 - 376
Target Start/End: Original strand, 41126291 - 41126360
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattt 376  Q
    |||| |||||||||||||||| |||| ||  ||||||| ||||  |||||||||||||||||||||||||    
T  41126291 actataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtcctctccgttaattt 41126360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 318 - 378
Target Start/End: Complemental strand, 27899267 - 27899207
Alignment:
Q  318 tctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||||||||||||||||||||||| || |||||||| |||||||| | ||||||| |||||    
T  27899267 tctcaatttgatcccataaatcttttgtcgtttactattttggtcttatccgttagttttt 27899207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 307 - 379
Target Start/End: Original strand, 35127862 - 35127934
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaatttttt 379  Q
    |||| ||| |||||||||||  ||||||||||||| ||||||||||| |||||||| ||| ||||||| ||||    
T  35127862 actataaaatgtctcaattttgtcccataaatcttatgccgtttactattttggtcatcttcgttaatatttt 35127934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 307 - 379
Target Start/End: Original strand, 43935237 - 43935309
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaatttttt 379  Q
    |||| |||||||||||||||| || |||||||||||||||||||||| ||||  ||||| || ||| ||||||    
T  43935237 actataaagtgtctcaatttggtctcataaatcttctgccgtttactattttcatcctccccattagtttttt 43935309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 307 - 379
Target Start/End: Complemental strand, 43936204 - 43936132
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaatttttt 379  Q
    |||| ||||| ||| |||||| || ||||| ||||||| |||||||| |||||||||||||||||| ||||||    
T  43936204 actataaagtttcttaatttggtctcataattcttctgtcgtttactattttggtcctctccgttagtttttt 43936132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 13122534 - 13122467
Alignment:
Q  24 ggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatggatgac 91  Q
    ||||||| |||| | || |||||||||||||||| ||||||||||| ||||||||| |||||| ||||    
T  13122534 ggtagctcattccataagaactccacagttaagcgtgcttgatttggagcaattttgggatgggtgac 13122467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 317 - 372
Target Start/End: Complemental strand, 22061849 - 22061794
Alignment:
Q  317 gtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    ||||||||||| ||||||||||||| ||||||||||| |||| ||| |||||||||    
T  22061849 gtctcaatttggtcccataaatcttatgccgtttactattttagtcttctccgtta 22061794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 307 - 362
Target Start/End: Original strand, 25153710 - 25153765
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtc 362  Q
    |||| |||||||||||||||| ||||||||||||||| ||||||||  ||||||||    
T  25153710 actataaagtgtctcaatttggtcccataaatcttcttccgtttaccgttttggtc 25153765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 381
Target Start/End: Original strand, 14206725 - 14206799
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaa 381  Q
    |||| ||| ||| |||||||| ||| |||||||||||| |||||||| ||||| || ||||||||| ||||||||    
T  14206725 actataaaatgtttcaatttggtcctataaatcttctgtcgtttactattttgctcatctccgttagttttttaa 14206799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 381
Target Start/End: Original strand, 14215415 - 14215489
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaa 381  Q
    |||| ||| ||| |||||||| ||| |||||||||||| |||||||| ||||| || ||||||||| ||||||||    
T  14215415 actataaaatgtttcaatttggtcctataaatcttctgtcgtttactattttgctcatctccgttagttttttaa 14215489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 91
Target Start/End: Original strand, 2193391 - 2193440
Alignment:
Q  42 aactccacagttaagcatgcttgatttgtagcaattttaggatggatgac 91  Q
    |||||||||||||||| ||||||||||| ||||||||| |||||| ||||    
T  2193391 aactccacagttaagcgtgcttgatttggagcaattttgggatgggtgac 2193440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 307 - 372
Target Start/End: Original strand, 22060515 - 22060580
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| |||||||||||||||| | ||| || |||| ||||||||||| |||||||| |||||||||    
T  22060515 actataaagtgtctcaatttggttccacaagtcttatgccgtttactattttggtcatctccgtta 22060580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 307 - 372
Target Start/End: Complemental strand, 43007713 - 43007648
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| |||||||||||||||| |||||||| |||| || |||||||| |||| || ||||||||||    
T  43007713 actataaagtgtctcaatttggtcccataagtcttatgtcgtttactattttagttctctccgtta 43007648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 312 - 372
Target Start/End: Complemental strand, 48672834 - 48672774
Alignment:
Q  312 aaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||||||||||||||| |||||||||||   || |||||||| |||| |||||||||||||    
T  48672834 aaagtgtctcaatttggtcccataaatcgcgtgtcgtttactattttagtcctctccgtta 48672774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 91
Target Start/End: Original strand, 2465850 - 2465917
Alignment:
Q  24 ggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatggatgac 91  Q
    ||||||| |||| | || |||||||||||||||| ||||||| ||| ||||||||| |||||| ||||    
T  2465850 ggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgac 2465917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 2941786 - 2941719
Alignment:
Q  24 ggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatggatgac 91  Q
    ||||||| |||| | || |||||||||||||||| ||||||| ||| ||||||||| |||||| ||||    
T  2941786 ggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgac 2941719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 13125165 - 13125098
Alignment:
Q  24 ggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatggatgac 91  Q
    ||||||| |||| | || |||||||||||||||| ||||||| ||| ||||||||| |||||| ||||    
T  13125165 ggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgac 13125098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 28495637 - 28495570
Alignment:
Q  24 ggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatggatgac 91  Q
    ||||||| |||| | || |||||||||||||||| ||||||| ||| ||||||||| |||||| ||||    
T  28495637 ggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgac 28495570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 34405620 - 34405553
Alignment:
Q  24 ggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatggatgac 91  Q
    ||||||| |||| | || |||||||||||||||| ||||||| ||| ||||||||| |||||| ||||    
T  34405620 ggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgac 34405553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 316 - 359
Target Start/End: Original strand, 36702838 - 36702881
Alignment:
Q  316 tgtctcaatttgatcccataaatcttctgccgtttactcttttg 359  Q
    |||||||||||| |||||||||| |||||||||||||| |||||    
T  36702838 tgtctcaatttggtcccataaatattctgccgtttactattttg 36702881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 307 - 446
Target Start/End: Original strand, 41515048 - 41515187
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaaaatatattattcttaatataatttt 406  Q
    |||| ||||||| |||||||| |||||||| |||||    ||||||| || |||| |||||||||||||||||||  | ||   || || |||| |||||    
T  41515048 actataaagtgtttcaatttggtcccataagtcttcatatgtttactattgtggttctctccgttaattttttaatgtctaaagttttttatatgatttt 41515147  T
Q  407 aaccacttgattgcaggtctatagtatctaagagtgaacc 446  Q
    ||||| ||||||||| ||| ||  ||| ||| ||||||||    
T  41515148 aaccatttgattgcatgtccattatatttaatagtgaacc 41515187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 91
Target Start/End: Original strand, 42515661 - 42515728
Alignment:
Q  24 ggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatggatgac 91  Q
    ||||||| |||| | || |||||||||||||||| ||||||| ||| ||||||||| |||||| ||||    
T  42515661 ggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgac 42515728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 313 - 372
Target Start/End: Original strand, 43006443 - 43006502
Alignment:
Q  313 aagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    ||||||||||||||| |||| ||| |||| |||||||| || |||||||| |||||||||    
T  43006443 aagtgtctcaatttggtcccctaagtcttatgccgtttgctattttggtcatctccgtta 43006502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 307 - 362
Target Start/End: Original strand, 46457122 - 46457177
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtc 362  Q
    |||| |||||||||||||||| ||||||||||||||| || |||||  ||||||||    
T  46457122 actataaagtgtctcaatttggtcccataaatcttcttccatttaccattttggtc 46457177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 307 - 370
Target Start/End: Original strand, 48671130 - 48671192
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgt 370  Q
    |||| ||||| |||||||||||||| ||||||||| ||||||||||| ||| ||| ||||||||    
T  48671130 actataaagtatctcaatttgatcc-ataaatcttatgccgtttactatttcggttctctccgt 48671192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 91
Target Start/End: Original strand, 7646550 - 7646599
Alignment:
Q  42 aactccacagttaagcatgcttgatttgtagcaattttaggatggatgac 91  Q
    |||||||||||||||| ||||||| ||| ||||||||| |||||| ||||    
T  7646550 aactccacagttaagcgtgcttgacttggagcaattttgggatgggtgac 7646599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 372
Target Start/End: Complemental strand, 30224040 - 30223975
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| ||| |||||||||||| |||| ||  ||||||||||||   ||||||||||||||||||||    
T  30224040 actataaattgtctcaatttggtcccttatgtcttctgccgttacatcttttggtcctctccgtta 30223975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 372
Target Start/End: Original strand, 33458362 - 33458426
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| |||||||||||||| | |||||||| |||||| |||||||||  | |||||||||||||||    
T  33458362 actataaagtgtctcaattag-tcccataagtcttcttccgtttactaatgtggtcctctccgtta 33458426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 372
Target Start/End: Original strand, 34557449 - 34557514
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| |||||||||||||||| |||| ||  |||| ||||||||| |||||||||| | |||||||    
T  34557449 actataaagtgtctcaatttggtcccttatgtcttttgccgtttattcttttggtcatatccgtta 34557514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 307 - 367
Target Start/End: Complemental strand, 4858408 - 4858348
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctc 367  Q
    |||| ||| |||||||||||| ||||||||||||||||  ||||||| ||||  |||||||    
T  4858408 actataaaatgtctcaatttggtcccataaatcttctgttgtttactattttaatcctctc 4858348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 312 - 372
Target Start/End: Complemental strand, 7347279 - 7347219
Alignment:
Q  312 aaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||||||||||||||| ||| ||||||||| || |||||||  ||||  ||||||||||||    
T  7347279 aaagtgtctcaatttggtcctataaatcttatgtcgtttaccattttaatcctctccgtta 7347219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 24 - 108
Target Start/End: Original strand, 9125076 - 9125160
Alignment:
Q  24 ggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatggatgacattttgggaagttttcc 108  Q
    ||||||| |||| | || |||||||||||||||| ||||||| | | ||||||||| |||||| |||| |   ||||||||||||    
T  9125076 ggtagctcattccataagaactccacagttaagcgtgcttgactcggagcaattttgggatgggtgacctaccgggaagttttcc 9125160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 307 - 371
Target Start/End: Complemental strand, 25155000 - 25154936
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtt 371  Q
    |||| ||||||||||||||| ||| |||||||||||| | |||||   |||||||| ||||||||    
T  25155000 actataaagtgtctcaatttaatctcataaatcttcttctgtttatcattttggtcatctccgtt 25154936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 312 - 372
Target Start/End: Original strand, 30222703 - 30222763
Alignment:
Q  312 aaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    ||||| |||||||||| |||| ||  ||||||| ||||  |||||||||||||||||||||    
T  30222703 aaagtatctcaatttggtcccttatgtcttctgtcgttacctcttttggtcctctccgtta 30222763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 24 - 108
Target Start/End: Complemental strand, 43776319 - 43776235
Alignment:
Q  24 ggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatggatgacattttgggaagttttcc 108  Q
    ||||||| |||| | || |||||||||||||||| ||||||| ||| ||||||||| | |||| |||| |   ||||||||||||    
T  43776319 ggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttggaatgggtgacctgcggggaagttttcc 43776235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 312 - 368
Target Start/End: Original strand, 46673547 - 46673602
Alignment:
Q  312 aaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctcc 368  Q
    ||||||| |||||||| ||||||||||||| || |||||||| | ||||||||||||    
T  46673547 aaagtgtttcaatttggtcccataaatcttatg-cgtttactatgttggtcctctcc 46673602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 50; Significance: 3e-19; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 338 - 447
Target Start/End: Complemental strand, 73019 - 72910
Alignment:
Q  338 tcttctgccgtttactcttttggtcctctccgttaattttttaaaatatattattcttaatataattttaaccacttgattgcaggtctatagtatctaa 437  Q
    ||||||| ||||  ||||||||||||||||||||| |||||| || |||| |||| ||||||| ||| |||||  ||||||||||||||||||||| | |    
T  73019 tcttctgtcgttacctcttttggtcctctccgttagtttttttaattataatatttttaatatgattataaccgtttgattgcaggtctatagtatatta 72920  T
Q  438 gagtgaacca 447  Q
     |||||||||    
T  72919 cagtgaacca 72910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 105837 - 105898
Alignment:
Q  24 ggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatg 85  Q
    ||||||| |||| | || |||||||||||||||| ||||||| ||| ||||||||| |||||    
T  105837 ggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatg 105898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 47; Significance: 2e-17; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 307 - 381
Target Start/End: Original strand, 22179 - 22253
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaa 381  Q
    |||| ||| |||||||||||| || ||||||||||||| |||||||| |||||||| ||||||||||||||||||    
T  22179 actataaaatgtctcaatttgttcacataaatcttctgtcgtttactattttggtcatctccgttaattttttaa 22253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 312 - 378
Target Start/End: Complemental strand, 39960 - 39894
Alignment:
Q  312 aaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||||||||||||||| ||||||||||||||   | ||  |||||||||||||||| |||| |||||    
T  39960 aaagtgtctcaatttggtcccataaatcttcccacattacctcttttggtcctctctgttagttttt 39894  T

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Target: scaffold1974 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1974
Description:

Target: scaffold1974; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 307 - 378
Target Start/End: Complemental strand, 692 - 621
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||| |||||||||||||||  ||||||||||||||||||||||||  |||||||| ||||||||| |||||    
T  692 actataaagtgtctcaatttagtcccataaatcttctgccgtttaccattttggtcatctccgttagttttt 621  T

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Target: scaffold1878 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1878
Description:

Target: scaffold1878; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 307 - 378
Target Start/End: Original strand, 582 - 653
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||| |||||||||||||||  ||||||||||||||||||||||||  |||||||| ||||||||| |||||    
T  582 actataaagtgtctcaatttagtcccataaatcttctgccgtttaccattttggtcatctccgttagttttt 653  T

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Target: scaffold0290 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 307 - 378
Target Start/End: Complemental strand, 9542 - 9471
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||| |||||||||||||||  ||||||||||||||||||||||||  |||||||| ||||||||| |||||    
T  9542 actataaagtgtctcaatttagtcccataaatcttctgccgtttaccattttggtcatctccgttagttttt 9471  T

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Target: scaffold0290; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 307 - 381
Target Start/End: Original strand, 8431 - 8505
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaa 381  Q
    |||| ||| |||||||| ||| |||||||||||||| | | |||||| ||| |||| ||||||||| ||||||||    
T  8431 actataaactgtctcaaattggtcccataaatcttcagtcatttactatttcggtcatctccgttagttttttaa 8505  T

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Target: scaffold0098 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 315 - 381
Target Start/End: Complemental strand, 42402 - 42336
Alignment:
Q  315 gtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaa 381  Q
    |||| ||||||||||||||||||||||||| |||||||| ||||||||||||| |||| | ||||||    
T  42402 gtgtatcaatttgatcccataaatcttctgtcgtttactattttggtcctctctgttagtattttaa 42336  T

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Target: scaffold2127 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold2127
Description:

Target: scaffold2127; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 307 - 372
Target Start/End: Complemental strand, 579 - 514
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||| |||||||||||||||| |  |||||||||| ||||||||||| ||||||||||||||||||    
T  579 actataaagtgtctcaatttggtgtcataaatcttatgccgtttactattttggtcctctccgtta 514  T

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Target: scaffold0025 (Bit Score: 38; Significance: 0.000000000004; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 312 - 449
Target Start/End: Original strand, 54648 - 54785
Alignment:
Q  312 aaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaaaatatattattcttaatataattttaacca 411  Q
    |||||||||||||||| ||||||||||||||  | ||||||   | ||||||||||||||| |||||| |  | || |||| ||||||| ||| |||||     
T  54648 aaagtgtctcaatttggtcccataaatcttcctctgtttaccaatgtggtcctctccgttagttttttgatgtctaatatttttaatatgattataaccg 54747  T
Q  412 cttgattgcaggtctatagtatctaagagtgaaccatc 449  Q
     |||||||||| |  ||||||| | | |||||||||||    
T  54748 tttgattgcagattcatagtatattacagtgaaccatc 54785  T

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Target: scaffold0025; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 312 - 367
Target Start/End: Complemental strand, 56759 - 56704
Alignment:
Q  312 aaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctc 367  Q
    |||||||||||||||| ||| ||||||||||||||||||||| ||| | |||||||    
T  56759 aaagtgtctcaatttggtcctataaatcttctgccgtttactgtttagatcctctc 56704  T

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Target: scaffold0013 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 307 - 428
Target Start/End: Original strand, 96212 - 96333
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttttaaaatatattattcttaatataatttt 406  Q
    |||| |||||||||||||||||||| ||||||||||| ||||||||  |||||||| | |||||   |||||||| || || |||| || ||||  |||     
T  96212 actataaagtgtctcaatttgatccgataaatcttcttccgtttaccattttggtcatgtccgtgtgttttttaatatctaatatttttgatatgttttc 96311  T
Q  407 aaccacttgattgcaggtctat 428  Q
     |||| | ||||||||||||||    
T  96312 gaccattcgattgcaggtctat 96333  T

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Target: scaffold0166 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 313 - 373
Target Start/End: Complemental strand, 4276 - 4216
Alignment:
Q  313 aagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaa 373  Q
    |||||||||||||||||| ||||| || ||||||||||||  ||||| |||||||||||||    
T  4276 aagtgtctcaatttgatctcataactcgtctgccgtttaccattttgttcctctccgttaa 4216  T

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Target: scaffold0007 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 307 - 379
Target Start/End: Complemental strand, 145933 - 145861
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaatttttt 379  Q
    |||| ||| ||||| |||||| ||| ||||||||| ||||||||||| |||||||| ||||||||||| ||||    
T  145933 actataaaatgtcttaatttggtccaataaatcttatgccgtttactattttggtcatctccgttaatatttt 145861  T

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Target: scaffold0137 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 42 - 105
Target Start/End: Original strand, 7077 - 7140
Alignment:
Q  42 aactccacagttaagcatgcttgatttgtagcaattttaggatggatgacattttgggaagttt 105  Q
    |||||||||||||||||||||||| ||| ||||||||| | |||| |||| |||||| ||||||    
T  7077 aactccacagttaagcatgcttgacttggagcaattttggtatgggtgaccttttggaaagttt 7140  T

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Target: scaffold0045 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 307 - 374
Target Start/End: Complemental strand, 77245 - 77178
Alignment:
Q  307 actacaaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaat 374  Q
    |||| |||| || |||||||| |||||||||| |||| ||||||||| |||||||| |||||||||||    
T  77245 actataaagcgtttcaatttggtcccataaatattctaccgtttactgttttggtcttctccgttaat 77178  T

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Target: scaffold0022 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 105
Target Start/End: Complemental strand, 163163 - 163082
Alignment:
Q  24 ggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatggatgacattttgggaagttt 105  Q
    ||||||| |||| | || |||||||||||||||| ||||||| ||| ||||||||| |||||| |||| | | |||||||||    
T  163163 ggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctatcgggaagttt 163082  T

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Target: scaffold0177 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 312 - 372
Target Start/End: Original strand, 1812 - 1872
Alignment:
Q  312 aaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    |||||||||||||||| |||| ||  ||||||| ||||  |||||||||||||||||||||    
T  1812 aaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtcctctccgtta 1872  T

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Target: scaffold0499 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 2080 - 2013
Alignment:
Q  24 ggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatggatgac 91  Q
    ||||||| |||| | || |||||||||||||||| ||||||| ||| ||||||||| |||||| ||||    
T  2080 ggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgac 2013  T

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Target: scaffold0277 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 14731 - 14664
Alignment:
Q  24 ggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatggatgac 91  Q
    ||||||| |||| | || |||||||||||||||| ||||||| ||| ||||||||| |||||| ||||    
T  14731 ggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgac 14664  T

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Target: scaffold0243 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 91
Target Start/End: Original strand, 1337 - 1404
Alignment:
Q  24 ggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatggatgac 91  Q
    ||||||| |||| | || |||||||||||||||| ||||||| ||| ||||||||| |||||| ||||    
T  1337 ggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgac 1404  T

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Target: scaffold0020 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 107492 - 107425
Alignment:
Q  24 ggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatggatgac 91  Q
    ||||||| |||| | || |||||||||||||||| ||||||| ||| ||||||||| |||||| ||||    
T  107492 ggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgac 107425  T

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Target: scaffold0168 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 24 - 86
Target Start/End: Original strand, 2859 - 2921
Alignment:
Q  24 ggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatgg 86  Q
    ||||||| |||| | || |||||||||||||||| ||||||| ||| ||||||||| ||||||    
T  2859 ggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgg 2921  T

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Target: scaffold0122 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 328 - 378
Target Start/End: Original strand, 16018 - 16068
Alignment:
Q  328 atcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    |||||||||| ||| ||||||||||| |||| ||||||||||||| |||||    
T  16018 atcccataaaccttatgccgtttactattttagtcctctccgttagttttt 16068  T

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Target: scaffold0322 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 91
Target Start/End: Original strand, 19101 - 19150
Alignment:
Q  42 aactccacagttaagcatgcttgatttgtagcaattttaggatggatgac 91  Q
    |||||||||||||||| ||||||| ||| ||||||||| |||||| ||||    
T  19101 aactccacagttaagcgtgcttgacttggagcaattttgggatgggtgac 19150  T

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Target: scaffold0015 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 378
Target Start/End: Complemental strand, 207852 - 207791
Alignment:
Q  317 gtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgttaattttt 378  Q
    ||||||| |||||||| ||  |||||| |||||  ||||||||||||||||||||| |||||    
T  207852 gtctcaaattgatcccttatgtcttcttccgttatctcttttggtcctctccgttagttttt 207791  T

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Target: scaffold0040 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 24 - 108
Target Start/End: Complemental strand, 2239 - 2155
Alignment:
Q  24 ggtagcttattctacaaaaactccacagttaagcatgcttgatttgtagcaattttaggatggatgacattttgggaagttttcc 108  Q
    |||||||||||| | || ||||| | |||||||| ||||||| ||| ||||||||| |||||| |||| |   ||||||||||||    
T  2239 ggtagcttattccataagaactcaatagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagttttcc 2155  T

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Target: scaffold0002 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 312 - 372
Target Start/End: Complemental strand, 458519 - 458459
Alignment:
Q  312 aaagtgtctcaatttgatcccataaatcttctgccgtttactcttttggtcctctccgtta 372  Q
    ||||||||| |||||| |||| ||  |||||||| |||  |||||||||||||||||||||    
T  458519 aaagtgtcttaatttggtcccttatgtcttctgctgttatctcttttggtcctctccgtta 458459  T

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