View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19382_low_55 (Length: 339)

Name: NF19382_low_55
Description: NF19382
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19382_low_55
NF19382_low_55
[»] chr7 (26 HSPs)
chr7 (13-317)||(4346432-4346736)
chr7 (13-317)||(4339898-4340204)
chr7 (13-317)||(4398097-4398403)
chr7 (13-306)||(4335728-4336020)
chr7 (233-284)||(30463390-30463441)
chr7 (234-284)||(30463968-30464018)
chr7 (241-284)||(8683069-8683112)
chr7 (232-281)||(25251500-25251549)
chr7 (241-284)||(8879766-8879809)
chr7 (241-284)||(10244726-10244769)
chr7 (229-284)||(21136818-21136873)
chr7 (235-282)||(36980987-36981034)
chr7 (241-284)||(39801705-39801748)
chr7 (241-284)||(40752858-40752901)
chr7 (241-284)||(44558793-44558836)
chr7 (242-284)||(3533027-3533069)
chr7 (232-281)||(36803828-36803877)
chr7 (110-154)||(4477526-4477570)
chr7 (241-281)||(5526724-5526764)
chr7 (232-284)||(7670424-7670476)
chr7 (232-284)||(8615013-8615065)
chr7 (232-284)||(30857238-30857290)
chr7 (241-281)||(32263006-32263046)
chr7 (233-281)||(42043088-42043136)
chr7 (232-284)||(46737775-46737827)
chr7 (241-281)||(48980486-48980526)
[»] scaffold0057 (1 HSPs)
scaffold0057 (243-282)||(35179-35218)
[»] chr8 (14 HSPs)
chr8 (241-284)||(13286130-13286173)
chr8 (242-284)||(12910825-12910867)
chr8 (241-282)||(44293574-44293615)
chr8 (241-284)||(8717494-8717537)
chr8 (243-286)||(30417627-30417670)
chr8 (241-284)||(37015855-37015898)
chr8 (242-284)||(30427731-30427773)
chr8 (235-281)||(33620891-33620937)
chr8 (241-282)||(15188898-15188939)
chr8 (243-284)||(17002358-17002399)
chr8 (235-284)||(19778058-19778107)
chr8 (241-282)||(21557432-21557473)
chr8 (242-282)||(574384-574424)
chr8 (252-284)||(11052986-11053018)
[»] chr5 (12 HSPs)
chr5 (237-284)||(6234819-6234866)
chr5 (241-284)||(19248478-19248521)
chr5 (242-284)||(18489095-18489137)
chr5 (236-282)||(26409247-26409293)
chr5 (243-284)||(13409429-13409470)
chr5 (241-284)||(37932329-37932372)
chr5 (234-284)||(34206219-34206269)
chr5 (232-284)||(6624766-6624818)
chr5 (241-281)||(10199018-10199058)
chr5 (240-284)||(27679496-27679540)
chr5 (236-284)||(31308662-31308710)
chr5 (248-284)||(42505878-42505914)
[»] chr1 (27 HSPs)
chr1 (241-284)||(1794595-1794638)
chr1 (241-284)||(52441530-52441573)
chr1 (235-284)||(45140025-45140074)
chr1 (248-284)||(18166608-18166644)
chr1 (228-284)||(24124849-24124905)
chr1 (248-284)||(44678036-44678072)
chr1 (249-284)||(13775630-13775665)
chr1 (241-284)||(27449464-27449507)
chr1 (241-284)||(29233993-29234036)
chr1 (241-284)||(34632168-34632211)
chr1 (241-284)||(42045391-42045434)
chr1 (242-284)||(8253739-8253781)
chr1 (242-284)||(34521209-34521251)
chr1 (241-282)||(7925363-7925404)
chr1 (241-282)||(8153134-8153175)
chr1 (241-282)||(36371061-36371102)
chr1 (232-284)||(1091169-1091221)
chr1 (248-284)||(3509960-3509996)
chr1 (248-284)||(13779584-13779620)
chr1 (240-284)||(14520942-14520986)
chr1 (236-284)||(14880822-14880870)
chr1 (236-284)||(16997284-16997332)
chr1 (240-284)||(17283949-17283993)
chr1 (248-284)||(26803470-26803506)
chr1 (252-284)||(28006752-28006784)
chr1 (240-284)||(38448885-38448929)
chr1 (241-281)||(51127912-51127952)
[»] chr6 (14 HSPs)
chr6 (235-284)||(5679431-5679480)
chr6 (241-284)||(1918477-1918520)
chr6 (229-284)||(4450249-4450304)
chr6 (241-284)||(12333587-12333630)
chr6 (241-284)||(20744137-20744180)
chr6 (241-284)||(24269882-24269925)
chr6 (241-284)||(29335594-29335637)
chr6 (241-284)||(32053787-32053830)
chr6 (242-284)||(655768-655810)
chr6 (237-278)||(2044672-2044713)
chr6 (248-284)||(1377721-1377757)
chr6 (248-284)||(1385469-1385505)
chr6 (248-284)||(9372374-9372410)
chr6 (246-282)||(10053254-10053290)
[»] chr3 (20 HSPs)
chr3 (241-282)||(33633339-33633380)
chr3 (243-284)||(50570208-50570249)
chr3 (242-282)||(22843464-22843504)
chr3 (248-284)||(40575628-40575664)
chr3 (242-282)||(42269298-42269338)
chr3 (233-284)||(977960-978011)
chr3 (241-284)||(10498714-10498757)
chr3 (241-284)||(16792993-16793036)
chr3 (241-284)||(52535884-52535927)
chr3 (241-279)||(53429154-53429192)
chr3 (242-284)||(53996299-53996341)
chr3 (239-284)||(8113581-8113626)
chr3 (243-284)||(29631187-29631228)
chr3 (241-282)||(46903907-46903948)
chr3 (235-284)||(51882219-51882268)
chr3 (248-284)||(2662098-2662134)
chr3 (240-284)||(5702197-5702240)
chr3 (248-284)||(24428492-24428528)
chr3 (248-284)||(25441519-25441555)
chr3 (252-284)||(30050447-30050479)
[»] chr2 (26 HSPs)
chr2 (242-282)||(4238759-4238799)
chr2 (236-284)||(24593370-24593418)
chr2 (249-285)||(36441185-36441221)
chr2 (241-281)||(40896531-40896571)
chr2 (241-284)||(7206124-7206167)
chr2 (241-284)||(9383228-9383271)
chr2 (241-284)||(22608526-22608569)
chr2 (241-284)||(34464428-34464471)
chr2 (242-284)||(30762514-30762556)
chr2 (241-282)||(4557792-4557833)
chr2 (235-284)||(12124538-12124587)
chr2 (248-284)||(7350552-7350588)
chr2 (241-281)||(9517031-9517071)
chr2 (248-284)||(9686463-9686499)
chr2 (248-284)||(15617658-15617694)
chr2 (240-284)||(18231492-18231536)
chr2 (240-284)||(19179069-19179113)
chr2 (232-284)||(22520207-22520259)
chr2 (248-284)||(22571884-22571920)
chr2 (236-284)||(24305324-24305372)
chr2 (240-284)||(24393736-24393780)
chr2 (242-286)||(24520656-24520700)
chr2 (248-284)||(25598581-25598617)
chr2 (240-284)||(28771580-28771624)
chr2 (232-284)||(40099402-40099454)
chr2 (232-284)||(42066702-42066754)
[»] scaffold0118 (1 HSPs)
scaffold0118 (241-284)||(39997-40040)
[»] chr4 (20 HSPs)
chr4 (241-284)||(2186352-2186395)
chr4 (243-286)||(10519136-10519179)
chr4 (241-284)||(12671767-12671810)
chr4 (241-284)||(21317357-21317400)
chr4 (241-284)||(32180829-32180872)
chr4 (241-284)||(37193248-37193291)
chr4 (241-284)||(52270049-52270092)
chr4 (242-284)||(6087747-6087789)
chr4 (242-284)||(19854565-19854607)
chr4 (242-284)||(20383488-20383530)
chr4 (242-284)||(28435267-28435309)
chr4 (243-284)||(11949782-11949823)
chr4 (243-284)||(31760247-31760288)
chr4 (243-284)||(37921747-37921788)
chr4 (241-282)||(54500568-54500609)
chr4 (252-284)||(6520081-6520113)
chr4 (248-284)||(16304117-16304153)
chr4 (234-286)||(18915063-18915115)
chr4 (236-284)||(22279539-22279587)
chr4 (232-284)||(22630379-22630431)
[»] scaffold0117 (1 HSPs)
scaffold0117 (235-284)||(18286-18335)
[»] scaffold0006 (1 HSPs)
scaffold0006 (241-286)||(223694-223739)
[»] scaffold0197 (1 HSPs)
scaffold0197 (241-281)||(21777-21817)
[»] scaffold0122 (1 HSPs)
scaffold0122 (248-284)||(31174-31210)


Alignment Details
Target: chr7 (Bit Score: 218; Significance: 1e-120; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 13 - 317
Target Start/End: Original strand, 4346432 - 4346736
Alignment:
Q  13 aatatcttcaataaccaaaaatattttcaactannnnnnnnactattgttccaacataaacttctatttttctacaagtcatggctaacgttgatgaaga 112  Q
    |||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4346432 aatatcttcaataaccaaaaatattttcaactattttttttactattgttccaacataaacttctatttttctacaagtcatggctaacgttgatgaaga 4346531  T
Q  113 agttattaattgtgcatattaagatgtatatggagattcacatagatagtagtcactcggnnnnnnnnnnnnnnnnnaccgaaagtgtgcactttttaaa 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                 |||||||||||||||||||||||    
T  4346532 agttattaattgtgcatattaagatgtatatggagattcacatagatagtagtcactcggttttattttaattttttaccgaaagtgtgcactttttaaa 4346631  T
Q  213 tctatttaccaaacagtaattatgtctccgtgagattagctcagttagtatagacaatgcataatatatgcatgaaaaaatggtaaaatgttttgtcctt 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  4346632 tctatttaccaaacagtaattatgtctccgtgagattagctcagttggtagggacaatgcataatatatgcatgaaaaaatggtaaaatgttttgtcctt 4346731  T
Q  313 tcgag 317  Q
    |||||    
T  4346732 tcgag 4346736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 13 - 317
Target Start/End: Original strand, 4339898 - 4340204
Alignment:
Q  13 aatatcttcaataaccaaaaatattttcaactannnnnnnnactattgttccaacataaacttctatttttctacaagtcatggctaacgttgatgaaga 112  Q
    |||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||    
T  4339898 aatatcttcaataaccaaaaatattttcaactattttttttactattgttccaacataaacttctatttttctacaagtcacggctaatgttgatcaaga 4339997  T
Q  113 agttattaattgtgcatattaagatgtatatggagattcacatagatagtagtcactcggnnnnnnnnnnnnnnnnnaccgaaagtgtgcactttttaaa 212  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||                 |||||||||||||||||||||||    
T  4339998 agttattaattgtgcatattaagatgtatatggagattcgcatagagagtagtcactcggttttattttaattttttaccgaaagtgtgcactttttaaa 4340097  T
Q  213 tctatttaccaaacagtaattatgtctccgtgagattagctcagttagtatagacaatgcataatatatgcatgaaaaaatggtaaaatg--ttttgtcc 310  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||  |||||||||||||||||||| ||| |||||||||||||  ||||||||    
T  4340098 tctatttaccaaacagcaattatgtctccgtgagattagctcagttggtaaggacaatgcataatatatgcaagaataaatggtaaaatgttttttgtcc 4340197  T
Q  311 tttcgag 317  Q
    |||||||    
T  4340198 tttcgag 4340204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 13 - 317
Target Start/End: Original strand, 4398097 - 4398403
Alignment:
Q  13 aatatcttcaataaccaaaaatattttcaactannnnnnnnactattgttccaacataaacttctatttttctacaagtcatggctaacgttgatgaaga 112  Q
    ||||||||||||||||||||||||||||||| |        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  4398097 aatatcttcaataaccaaaaatattttcaacaattttttttactattgttccaacataaacttctatttttctacaagtcatggctaatgttgatgaaga 4398196  T
Q  113 agttattaattgtgcatattaagatgtatatggagattcacatagatagtagtcactcggnnnnnnnnnnnnnnnnnaccgaaagtgtgcactttttaaa 212  Q
    ||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||| ||                 |||||||||||||||||||||||    
T  4398197 agttactaattttgcatattaagatgtatatggagattcgcatagatagtagtcactgggttttattttaactttttaccgaaagtgtgcactttttaaa 4398296  T
Q  213 tctatttaccaaacagtaattatgtctccgtgagattagctcagttagtatagacaatgcataatatatgcatgaaaaaatggtaaaatg--ttttgtcc 310  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||| |||   ||||||||||||||||||| ||||||| |||||||||  ||||||||    
T  4398297 tctatttaccaaacagcaattatgtctctgtgagattagctcagttggtaagaacaatgcataatatatgcaagaaaaaagggtaaaatgttttttgtcc 4398396  T
Q  311 tttcgag 317  Q
    |||||||    
T  4398397 tttcgag 4398403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 13 - 306
Target Start/End: Original strand, 4335728 - 4336020
Alignment:
Q  13 aatatcttcaataaccaaaaatattttcaactannnnnnnnactattgttccaacataaacttctatttttctacaagtcatggctaacgttgatgaaga 112  Q
    ||||||||||||||| |||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  4335728 aatatcttcaataacaaaaaatattttcaactattttttttactattgttccaacataaacttctatttttctacaagtcatggctaatgttgatcaaga 4335827  T
Q  113 agttattaattgtgcatattaagatgtatatggagattcacatagatagtagtcactcggnnnnnnnnnnnnnnnnnaccgaaagtgtgcactttttaaa 212  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||                 ||||||||||||||| |||||||    
T  4335828 agttattaattgcgcatattaagatgtatatggagattcgcatagatagtagtcactcggttttattttaatttcttaccgaaagtgtgcac-ttttaaa 4335926  T
Q  213 tctatttaccaaacagtaattatgtctccgtgagattagctcagttagtatagacaatgcataatatatgcatgaaaaaatggtaaaatgtttt 306  Q
    |||||||| ||||||| ||||||||||||||| |||||| |||||| |||   |||||||||||||||| ||||||||||||||||||||||||    
T  4335927 tctatttatcaaacagcaattatgtctccgtgggattagttcagttggtaagaacaatgcataatatatacatgaaaaaatggtaaaatgtttt 4336020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 284
Target Start/End: Complemental strand, 30463441 - 30463390
Alignment:
Q  233 tatgtctccgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    ||||||| |||||| ||| |||||||||||||||||||||||||||||||||    
T  30463441 tatgtcttcgtgaggttaactcagttagtatagacaatgcataatatatgca 30463390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 234 - 284
Target Start/End: Complemental strand, 30464018 - 30463968
Alignment:
Q  234 atgtctccgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||||| |||||| ||||||||||||||||||| |||||||||||||||||    
T  30464018 atgtcttcgtgagtttagctcagttagtatagataatgcataatatatgca 30463968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 284
Target Start/End: Original strand, 8683069 - 8683112
Alignment:
Q  241 cgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||||| ||||||||||| |||||||||||||||||||||||||    
T  8683069 cgtgagcttagctcagttggtatagacaatgcataatatatgca 8683112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 281
Target Start/End: Original strand, 25251500 - 25251549
Alignment:
Q  232 ttatgtctccgtgagattagctcagttagtatagacaatgcataatatat 281  Q
    ||||||||||||||| ||| ||||||| ||||| ||||||||||||||||    
T  25251500 ttatgtctccgtgagcttaactcagttggtataaacaatgcataatatat 25251549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 284
Target Start/End: Complemental strand, 8879809 - 8879766
Alignment:
Q  241 cgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||||| ||| ||||||| |||||||||||||||||||||||||    
T  8879809 cgtgagcttaactcagttggtatagacaatgcataatatatgca 8879766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 284
Target Start/End: Original strand, 10244726 - 10244769
Alignment:
Q  241 cgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||||| ||||||||||| |||| ||||||||||||||||||||    
T  10244726 cgtgagcttagctcagttggtatggacaatgcataatatatgca 10244769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 229 - 284
Target Start/End: Original strand, 21136818 - 21136873
Alignment:
Q  229 taattatgtctccgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    ||||||||||| |||||| ||| ||||||| |||| ||||||| ||||||||||||    
T  21136818 taattatgtcttcgtgagcttaactcagttggtatggacaatgtataatatatgca 21136873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 282
Target Start/End: Original strand, 36980987 - 36981034
Alignment:
Q  235 tgtctccgtgagattagctcagttagtatagacaatgcataatatatg 282  Q
    ||||| |||||| |||||| ||||||||||||||||| ||||||||||    
T  36980987 tgtcttcgtgagcttagcttagttagtatagacaatgtataatatatg 36981034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 284
Target Start/End: Original strand, 39801705 - 39801748
Alignment:
Q  241 cgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||||| ||||||||||| |||| ||||||||||||||||||||    
T  39801705 cgtgagcttagctcagttggtatggacaatgcataatatatgca 39801748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 284
Target Start/End: Complemental strand, 40752901 - 40752858
Alignment:
Q  241 cgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||||| |||||||||||||||| |||||| |||||||||||||    
T  40752901 cgtgagcttagctcagttagtatggacaatacataatatatgca 40752858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 284
Target Start/End: Complemental strand, 44558836 - 44558793
Alignment:
Q  241 cgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||||| ||||||||||| |||| ||||||||||||||||||||    
T  44558836 cgtgagtttagctcagttggtatggacaatgcataatatatgca 44558793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 284
Target Start/End: Complemental strand, 3533069 - 3533027
Alignment:
Q  242 gtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    ||||| |||||||||||||||  ||||||||||||||||||||    
T  3533069 gtgagtttagctcagttagtaaggacaatgcataatatatgca 3533027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 281
Target Start/End: Original strand, 36803828 - 36803877
Alignment:
Q  232 ttatgtctccgtgagattagctcagttagtatagacaatgcataatatat 281  Q
    |||||||  |||||| ||||||||||| ||| ||||||||||||||||||    
T  36803828 ttatgtcctcgtgagcttagctcagttggtagagacaatgcataatatat 36803877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 4477570 - 4477526
Alignment:
Q  110 agaagttattaattgtgcatattaagatgtatatggagattcaca 154  Q
    |||| |||||||||||||| ||||||||||| |||||| ||||||    
T  4477570 agaaattattaattgtgcacattaagatgtaaatggagtttcaca 4477526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 281
Target Start/End: Original strand, 5526724 - 5526764
Alignment:
Q  241 cgtgagattagctcagttagtatagacaatgcataatatat 281  Q
    |||||| ||||||||||| |||| |||||||||||||||||    
T  5526724 cgtgagcttagctcagttggtatggacaatgcataatatat 5526764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 284
Target Start/End: Original strand, 7670424 - 7670476
Alignment:
Q  232 ttatgtctccgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||||||| |||||| ||||||||||| || |  |||||||||||||||||||    
T  7670424 ttatgtcttcgtgagcttagctcagttggtttgaacaatgcataatatatgca 7670476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 284
Target Start/End: Original strand, 8615013 - 8615065
Alignment:
Q  232 ttatgtctccgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    ||||||||  ||||| ||||||||||| |||  ||||||||||||||||||||    
T  8615013 ttatgtctttgtgagcttagctcagttggtaaggacaatgcataatatatgca 8615065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 284
Target Start/End: Original strand, 30857238 - 30857290
Alignment:
Q  232 ttatgtctccgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||||||  |||||| |||||| |||| |||| ||||||||||||||||||||    
T  30857238 ttatgtcctcgtgagtttagcttagttggtatggacaatgcataatatatgca 30857290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 281
Target Start/End: Original strand, 32263006 - 32263046
Alignment:
Q  241 cgtgagattagctcagttagtatagacaatgcataatatat 281  Q
    |||||| ||||||||||| |||||||||||| |||||||||    
T  32263006 cgtgagcttagctcagttggtatagacaatgtataatatat 32263046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 281
Target Start/End: Complemental strand, 42043136 - 42043088
Alignment:
Q  233 tatgtctccgtgagattagctcagttagtatagacaatgcataatatat 281  Q
    |||||||  ||||| ||||||||||| |||| |||||||||||||||||    
T  42043136 tatgtctttgtgagcttagctcagttggtatggacaatgcataatatat 42043088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 284
Target Start/End: Original strand, 46737775 - 46737827
Alignment:
Q  232 ttatgtctccgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||||||  |||||| ||||||||||| || | ||||||||||||||||||||    
T  46737775 ttatgtcctcgtgagcttagctcagtttgtttggacaatgcataatatatgca 46737827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 281
Target Start/End: Original strand, 48980486 - 48980526
Alignment:
Q  241 cgtgagattagctcagttagtatagacaatgcataatatat 281  Q
    |||||| ||||||||||| |||| |||||||||||||||||    
T  48980486 cgtgagcttagctcagttggtatggacaatgcataatatat 48980526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 282
Target Start/End: Original strand, 35179 - 35218
Alignment:
Q  243 tgagattagctcagttagtatagacaatgcataatatatg 282  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  35179 tgagcttagctcagttagtatagacaatgcataatatatg 35218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000003; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 284
Target Start/End: Original strand, 13286130 - 13286173
Alignment:
Q  241 cgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||||| ||||||||||| |||||||||||||||||||||||||    
T  13286130 cgtgagcttagctcagttggtatagacaatgcataatatatgca 13286173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 284
Target Start/End: Complemental strand, 12910867 - 12910825
Alignment:
Q  242 gtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    ||||||||||||||||| |||| ||||||||||||||||||||    
T  12910867 gtgagattagctcagttggtatggacaatgcataatatatgca 12910825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 282
Target Start/End: Original strand, 44293574 - 44293615
Alignment:
Q  241 cgtgagattagctcagttagtatagacaatgcataatatatg 282  Q
    |||||| ||||||||||| |||||||||||||||||||||||    
T  44293574 cgtgagcttagctcagttggtatagacaatgcataatatatg 44293615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 284
Target Start/End: Complemental strand, 8717537 - 8717494
Alignment:
Q  241 cgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||||| ||||||||||| |||| ||||||||||||||||||||    
T  8717537 cgtgagtttagctcagttggtatggacaatgcataatatatgca 8717494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 243 - 286
Target Start/End: Complemental strand, 30417670 - 30417627
Alignment:
Q  243 tgagattagctcagttagtatagacaatgcataatatatgcatg 286  Q
    |||| ||||||||||| |||||||||||| ||||||||||||||    
T  30417670 tgagcttagctcagttggtatagacaatgtataatatatgcatg 30417627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 284
Target Start/End: Complemental strand, 37015898 - 37015855
Alignment:
Q  241 cgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||||| ||||||||||| ||| |||||||||||||||||||||    
T  37015898 cgtgagcttagctcagttggtagagacaatgcataatatatgca 37015855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 284
Target Start/End: Original strand, 30427731 - 30427773
Alignment:
Q  242 gtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    ||||| ||||||||||| |||| ||||||||||||||||||||    
T  30427731 gtgagcttagctcagttggtatggacaatgcataatatatgca 30427773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 281
Target Start/End: Original strand, 33620891 - 33620937
Alignment:
Q  235 tgtctccgtgagattagctcagttagtatagacaatgcataatatat 281  Q
    ||||| |||||| ||| |||||||||||| |||||||||||||||||    
T  33620891 tgtcttcgtgagtttaactcagttagtatggacaatgcataatatat 33620937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 282
Target Start/End: Original strand, 15188898 - 15188939
Alignment:
Q  241 cgtgagattagctcagttagtatagacaatgcataatatatg 282  Q
    |||||| ||| |||||||||||| ||||||||||||||||||    
T  15188898 cgtgagcttaactcagttagtatggacaatgcataatatatg 15188939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 284
Target Start/End: Complemental strand, 17002399 - 17002358
Alignment:
Q  243 tgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    ||||||||||||||||  |||||||||||||||| |||||||    
T  17002399 tgagattagctcagttgatatagacaatgcataaaatatgca 17002358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 19778058 - 19778107
Alignment:
Q  235 tgtctccgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||| ||||||| ||||||||||| |||  ||||||||||||||||||||    
T  19778058 tgtccccgtgagcttagctcagttggtaaggacaatgcataatatatgca 19778107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 282
Target Start/End: Original strand, 21557432 - 21557473
Alignment:
Q  241 cgtgagattagctcagttagtatagacaatgcataatatatg 282  Q
    |||||| ||| |||||||||||| ||||||||||||||||||    
T  21557432 cgtgagcttaactcagttagtatggacaatgcataatatatg 21557473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 282
Target Start/End: Original strand, 574384 - 574424
Alignment:
Q  242 gtgagattagctcagttagtatagacaatgcataatatatg 282  Q
    ||||| |||||||||||  ||||||||||||||||||||||    
T  574384 gtgagcttagctcagttgatatagacaatgcataatatatg 574424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 284
Target Start/End: Original strand, 11052986 - 11053018
Alignment:
Q  252 ctcagttagtatagacaatgcataatatatgca 284  Q
    |||||||||||| ||||||||||||||||||||    
T  11052986 ctcagttagtatggacaatgcataatatatgca 11053018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000003; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 237 - 284
Target Start/End: Complemental strand, 6234866 - 6234819
Alignment:
Q  237 tctccgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||||||||| ||||||||||||||||  |||||||||||||||||||    
T  6234866 tctccgtgagcttagctcagttagtatgaacaatgcataatatatgca 6234819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 284
Target Start/End: Original strand, 19248478 - 19248521
Alignment:
Q  241 cgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||||| ||||||||||| |||||||||||||||||||||||||    
T  19248478 cgtgagcttagctcagttggtatagacaatgcataatatatgca 19248521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 284
Target Start/End: Complemental strand, 18489137 - 18489095
Alignment:
Q  242 gtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    ||||| ||||||||||| |||||||||||||||||||||||||    
T  18489137 gtgagtttagctcagttggtatagacaatgcataatatatgca 18489095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 282
Target Start/End: Original strand, 26409247 - 26409293
Alignment:
Q  236 gtctccgtgagattagctcagttagtatagacaatgcataatatatg 282  Q
    ||||||||||| ||||||||||| |||| ||||||||||||||||||    
T  26409247 gtctccgtgagcttagctcagttggtatggacaatgcataatatatg 26409293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 284
Target Start/End: Original strand, 13409429 - 13409470
Alignment:
Q  243 tgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||| ||||||||||||||| |||||||||||||||||||||    
T  13409429 tgagtttagctcagttagtaaagacaatgcataatatatgca 13409470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 284
Target Start/End: Original strand, 37932329 - 37932372
Alignment:
Q  241 cgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||||| ||||||||||| |||| ||||||||||||||||||||    
T  37932329 cgtgagcttagctcagttggtatggacaatgcataatatatgca 37932372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 284
Target Start/End: Original strand, 34206219 - 34206269
Alignment:
Q  234 atgtctccgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    ||||| ||||||| ||| ||||||| ||| |||||||||||||||||||||    
T  34206219 atgtccccgtgagtttaactcagttggtaaagacaatgcataatatatgca 34206269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 284
Target Start/End: Original strand, 6624766 - 6624818
Alignment:
Q  232 ttatgtctccgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||||||  |||||| ||||||||||| | || ||||||||||||||||||||    
T  6624766 ttatgtcctcgtgagcttagctcagttggcatggacaatgcataatatatgca 6624818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 281
Target Start/End: Original strand, 10199018 - 10199058
Alignment:
Q  241 cgtgagattagctcagttagtatagacaatgcataatatat 281  Q
    |||||| ||||||||||| |||| |||||||||||||||||    
T  10199018 cgtgagcttagctcagttggtatggacaatgcataatatat 10199058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 284
Target Start/End: Original strand, 27679496 - 27679540
Alignment:
Q  240 ccgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    ||||||| ||||||||||| ||| ||| |||||||||||||||||    
T  27679496 ccgtgagcttagctcagttggtaaagataatgcataatatatgca 27679540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 284
Target Start/End: Complemental strand, 31308710 - 31308662
Alignment:
Q  236 gtctccgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    ||||||||||| ||||||||||| ||| |||||||  ||||||||||||    
T  31308710 gtctccgtgagcttagctcagttggtaaagacaatatataatatatgca 31308662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 284
Target Start/End: Original strand, 42505878 - 42505914
Alignment:
Q  248 ttagctcagttagtatagacaatgcataatatatgca 284  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  42505878 ttagctcagttggtatggacaatgcataatatatgca 42505914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000003; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 284
Target Start/End: Original strand, 1794595 - 1794638
Alignment:
Q  241 cgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||||| |||||||||||||||| ||||||||||||||||||||    
T  1794595 cgtgagcttagctcagttagtatggacaatgcataatatatgca 1794638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 284
Target Start/End: Complemental strand, 52441573 - 52441530
Alignment:
Q  241 cgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||||| ||||||||||| |||||||||||||||||||||||||    
T  52441573 cgtgagcttagctcagttggtatagacaatgcataatatatgca 52441530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 284
Target Start/End: Complemental strand, 45140074 - 45140025
Alignment:
Q  235 tgtctccgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||| ||||||| ||||||||||| |||| ||||||||||||||||||||    
T  45140074 tgtccccgtgagcttagctcagttggtatggacaatgcataatatatgca 45140025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 284
Target Start/End: Original strand, 18166608 - 18166644
Alignment:
Q  248 ttagctcagttagtatagacaatgcataatatatgca 284  Q
    ||||||||||| |||||||||||||||||||||||||    
T  18166608 ttagctcagttggtatagacaatgcataatatatgca 18166644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 24124905 - 24124849
Alignment:
Q  228 gtaattatgtctccgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||||| |||||||||||| |||||||||||  ||  ||||||||||||||||||||    
T  24124905 gtaattttgtctccgtgagtttagctcagttgttaaggacaatgcataatatatgca 24124849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 284
Target Start/End: Complemental strand, 44678072 - 44678036
Alignment:
Q  248 ttagctcagttagtatagacaatgcataatatatgca 284  Q
    ||||||||||| |||||||||||||||||||||||||    
T  44678072 ttagctcagtttgtatagacaatgcataatatatgca 44678036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 249 - 284
Target Start/End: Complemental strand, 13775665 - 13775630
Alignment:
Q  249 tagctcagttagtatagacaatgcataatatatgca 284  Q
    |||||||||||||| |||||||||||||||||||||    
T  13775665 tagctcagttagtagagacaatgcataatatatgca 13775630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 284
Target Start/End: Complemental strand, 27449507 - 27449464
Alignment:
Q  241 cgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||||| |||||||||||| ||| ||||||||||||||||||||    
T  27449507 cgtgagcttagctcagttaatatggacaatgcataatatatgca 27449464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 284
Target Start/End: Complemental strand, 29234036 - 29233993
Alignment:
Q  241 cgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||||| ||||||||||| ||||||||||||||||| |||||||    
T  29234036 cgtgagtttagctcagttggtatagacaatgcataaaatatgca 29233993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 284
Target Start/End: Original strand, 34632168 - 34632211
Alignment:
Q  241 cgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||||| ||||||||||| |||||||||||| ||||||||||||    
T  34632168 cgtgagcttagctcagttggtatagacaatgtataatatatgca 34632211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 284
Target Start/End: Complemental strand, 42045434 - 42045391
Alignment:
Q  241 cgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||||| ||||||||||| |||| ||||||||||||||||||||    
T  42045434 cgtgagcttagctcagttggtatggacaatgcataatatatgca 42045391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 284
Target Start/End: Original strand, 8253739 - 8253781
Alignment:
Q  242 gtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    ||||| ||||||||||| |||| ||||||||||||||||||||    
T  8253739 gtgagcttagctcagttggtatggacaatgcataatatatgca 8253781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 284
Target Start/End: Complemental strand, 34521251 - 34521209
Alignment:
Q  242 gtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    ||||| ||||||||||| |||| ||||||||||||||||||||    
T  34521251 gtgagtttagctcagttggtatggacaatgcataatatatgca 34521209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 282
Target Start/End: Original strand, 7925363 - 7925404
Alignment:
Q  241 cgtgagattagctcagttagtatagacaatgcataatatatg 282  Q
    |||||| ||||||||||| ||| |||||||||||||||||||    
T  7925363 cgtgagcttagctcagttggtagagacaatgcataatatatg 7925404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 282
Target Start/End: Original strand, 8153134 - 8153175
Alignment:
Q  241 cgtgagattagctcagttagtatagacaatgcataatatatg 282  Q
    |||||| ||| ||||||| |||||||||||||||||||||||    
T  8153134 cgtgagtttaactcagttggtatagacaatgcataatatatg 8153175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 282
Target Start/End: Complemental strand, 36371102 - 36371061
Alignment:
Q  241 cgtgagattagctcagttagtatagacaatgcataatatatg 282  Q
    |||||| ||||||||||| ||| |||||||||||||||||||    
T  36371102 cgtgagcttagctcagttggtagagacaatgcataatatatg 36371061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 284
Target Start/End: Original strand, 1091169 - 1091221
Alignment:
Q  232 ttatgtctccgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||||||  |||||| ||| ||||||| |||||||||||||||||| ||||||    
T  1091169 ttatgtcctcgtgagcttaactcagttggtatagacaatgcataatgtatgca 1091221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 284
Target Start/End: Complemental strand, 3509996 - 3509960
Alignment:
Q  248 ttagctcagttagtatagacaatgcataatatatgca 284  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  3509996 ttagctcagttggtatggacaatgcataatatatgca 3509960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 284
Target Start/End: Original strand, 13779584 - 13779620
Alignment:
Q  248 ttagctcagttagtatagacaatgcataatatatgca 284  Q
    |||||||||||  ||||||||||||||||||||||||    
T  13779584 ttagctcagttgatatagacaatgcataatatatgca 13779620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 284
Target Start/End: Original strand, 14520942 - 14520986
Alignment:
Q  240 ccgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    ||||||| ||||||||||| |||| |||||||||||| |||||||    
T  14520942 ccgtgagcttagctcagttggtatggacaatgcataaaatatgca 14520986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 284
Target Start/End: Original strand, 14880822 - 14880870
Alignment:
Q  236 gtctccgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||| |||||| |||||| ||||||||  ||||||||||||||||||||    
T  14880822 gtcttcgtgagcttagcttagttagtagggacaatgcataatatatgca 14880870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 284
Target Start/End: Complemental strand, 16997332 - 16997284
Alignment:
Q  236 gtctccgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    ||||||||||| ||||||||||| ||| |||||||||||| | ||||||    
T  16997332 gtctccgtgagcttagctcagttggtagagacaatgcatattttatgca 16997284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 284
Target Start/End: Original strand, 17283949 - 17283993
Alignment:
Q  240 ccgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    ||||||| ||||||||||| |||  ||||||||||||||||||||    
T  17283949 ccgtgagcttagctcagttggtaaggacaatgcataatatatgca 17283993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 284
Target Start/End: Complemental strand, 26803506 - 26803470
Alignment:
Q  248 ttagctcagttagtatagacaatgcataatatatgca 284  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  26803506 ttagctcagttggtatggacaatgcataatatatgca 26803470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 284
Target Start/End: Original strand, 28006752 - 28006784
Alignment:
Q  252 ctcagttagtatagacaatgcataatatatgca 284  Q
    |||||||| ||||||||||||||||||||||||    
T  28006752 ctcagttaatatagacaatgcataatatatgca 28006784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 284
Target Start/End: Complemental strand, 38448929 - 38448885
Alignment:
Q  240 ccgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    ||||||| ||||||||||| |||  ||||||||||||||||||||    
T  38448929 ccgtgagcttagctcagttggtaaggacaatgcataatatatgca 38448885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 281
Target Start/End: Complemental strand, 51127952 - 51127912
Alignment:
Q  241 cgtgagattagctcagttagtatagacaatgcataatatat 281  Q
    |||||| |||||||||||| ||| |||||||||||||||||    
T  51127952 cgtgagtttagctcagttaatatggacaatgcataatatat 51127912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000005; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 5679431 - 5679480
Alignment:
Q  235 tgtctccgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||||||||||  ||||||||| ||||| |||||||||||||||||||||    
T  5679431 tgtctccgtgaacttagctcagctagtaaagacaatgcataatatatgca 5679480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 284
Target Start/End: Complemental strand, 1918520 - 1918477
Alignment:
Q  241 cgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||||| ||| ||||||| |||||||||||||||||||||||||    
T  1918520 cgtgagtttaactcagttggtatagacaatgcataatatatgca 1918477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 229 - 284
Target Start/End: Original strand, 4450249 - 4450304
Alignment:
Q  229 taattatgtctccgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||| |||| |||||||| |||||||||||  || |||||||||||||||||||||    
T  4450249 taatgatgtttccgtgagcttagctcagttgataaagacaatgcataatatatgca 4450304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 284
Target Start/End: Complemental strand, 12333630 - 12333587
Alignment:
Q  241 cgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||||| |||||||||||||||| |||||||||||| |||||||    
T  12333630 cgtgagcttagctcagttagtatggacaatgcataaaatatgca 12333587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 284
Target Start/End: Original strand, 20744137 - 20744180
Alignment:
Q  241 cgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||||| ||||||||||| |||| ||||||||||||||||||||    
T  20744137 cgtgagcttagctcagttggtatggacaatgcataatatatgca 20744180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 284
Target Start/End: Original strand, 24269882 - 24269925
Alignment:
Q  241 cgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||||| |||||||||||||||| |||||||||||| |||||||    
T  24269882 cgtgagcttagctcagttagtatggacaatgcataaaatatgca 24269925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 284
Target Start/End: Complemental strand, 29335637 - 29335594
Alignment:
Q  241 cgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||||| ||| ||||||||||||| |||||||||||||||||||    
T  29335637 cgtgagcttaactcagttagtataaacaatgcataatatatgca 29335594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 284
Target Start/End: Original strand, 32053787 - 32053830
Alignment:
Q  241 cgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||||| ||||||||||| |||| ||||||||||||||||||||    
T  32053787 cgtgagcttagctcagttggtatggacaatgcataatatatgca 32053830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 284
Target Start/End: Complemental strand, 655810 - 655768
Alignment:
Q  242 gtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    ||||| ||||||||||| |||| ||||||||||||||||||||    
T  655810 gtgagcttagctcagttggtatcgacaatgcataatatatgca 655768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 278
Target Start/End: Complemental strand, 2044713 - 2044672
Alignment:
Q  237 tctccgtgagattagctcagttagtatagacaatgcataata 278  Q
    |||||||||| |||| |||||| |||||||||||||||||||    
T  2044713 tctccgtgagtttagttcagttggtatagacaatgcataata 2044672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 284
Target Start/End: Complemental strand, 1377757 - 1377721
Alignment:
Q  248 ttagctcagttagtatagacaatgcataatatatgca 284  Q
    ||||||||||||||| ||||||||||||| |||||||    
T  1377757 ttagctcagttagtagagacaatgcataacatatgca 1377721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 284
Target Start/End: Complemental strand, 1385505 - 1385469
Alignment:
Q  248 ttagctcagttagtatagacaatgcataatatatgca 284  Q
    ||||||||||||||| ||||||||||||| |||||||    
T  1385505 ttagctcagttagtagagacaatgcataacatatgca 1385469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 284
Target Start/End: Complemental strand, 9372410 - 9372374
Alignment:
Q  248 ttagctcagttagtatagacaatgcataatatatgca 284  Q
    |||||||||||||||| ||||| ||||||||||||||    
T  9372410 ttagctcagttagtatggacaacgcataatatatgca 9372374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 282
Target Start/End: Original strand, 10053254 - 10053290
Alignment:
Q  246 gattagctcagttagtatagacaatgcataatatatg 282  Q
    ||||||||||||| |||| ||||||||||||||||||    
T  10053254 gattagctcagttggtatggacaatgcataatatatg 10053290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000005; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 282
Target Start/End: Complemental strand, 33633380 - 33633339
Alignment:
Q  241 cgtgagattagctcagttagtatagacaatgcataatatatg 282  Q
    |||||| ||| |||||||||||||||||||||||||||||||    
T  33633380 cgtgagcttaactcagttagtatagacaatgcataatatatg 33633339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 284
Target Start/End: Complemental strand, 50570249 - 50570208
Alignment:
Q  243 tgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||| ||||||||||| |||||||||||||||||||||||||    
T  50570249 tgagcttagctcagttggtatagacaatgcataatatatgca 50570208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 282
Target Start/End: Original strand, 22843464 - 22843504
Alignment:
Q  242 gtgagattagctcagttagtatagacaatgcataatatatg 282  Q
    ||||| ||||||||||||||| |||||||||||||||||||    
T  22843464 gtgagcttagctcagttagtaaagacaatgcataatatatg 22843504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 284
Target Start/End: Complemental strand, 40575664 - 40575628
Alignment:
Q  248 ttagctcagttagtatagacaatgcataatatatgca 284  Q
    |||||||| ||||||||||||||||||||||||||||    
T  40575664 ttagctcaattagtatagacaatgcataatatatgca 40575628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 282
Target Start/End: Original strand, 42269298 - 42269338
Alignment:
Q  242 gtgagattagctcagttagtatagacaatgcataatatatg 282  Q
    ||||| |||||||||||||||| ||||||||||||||||||    
T  42269298 gtgagtttagctcagttagtatggacaatgcataatatatg 42269338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 233 - 284
Target Start/End: Complemental strand, 978011 - 977960
Alignment:
Q  233 tatgtctccgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    ||||||| ||| || ||||||||||| |||| ||||||||||||||||||||    
T  978011 tatgtctacgtaagcttagctcagttggtatggacaatgcataatatatgca 977960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 284
Target Start/End: Complemental strand, 10498757 - 10498714
Alignment:
Q  241 cgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||||| ||||||||||| |||| ||||||||||||||||||||    
T  10498757 cgtgagcttagctcagttggtatggacaatgcataatatatgca 10498714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 284
Target Start/End: Complemental strand, 16793036 - 16792993
Alignment:
Q  241 cgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||||| ||||| ||||| |||||||||||||||||||||||||    
T  16793036 cgtgagcttagcacagttggtatagacaatgcataatatatgca 16792993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 284
Target Start/End: Complemental strand, 52535927 - 52535884
Alignment:
Q  241 cgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||||| ||| ||||||||||||||||||| |||||||||||||    
T  52535927 cgtgagcttaactcagttagtatagacaatacataatatatgca 52535884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 279
Target Start/End: Original strand, 53429154 - 53429192
Alignment:
Q  241 cgtgagattagctcagttagtatagacaatgcataatat 279  Q
    |||||| ||||||||||| ||||||||||||||||||||    
T  53429154 cgtgagtttagctcagttggtatagacaatgcataatat 53429192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 284
Target Start/End: Original strand, 53996299 - 53996341
Alignment:
Q  242 gtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    ||||| ||||||||||| |||| ||||||||||||||||||||    
T  53996299 gtgagcttagctcagttggtatggacaatgcataatatatgca 53996341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 284
Target Start/End: Complemental strand, 8113626 - 8113581
Alignment:
Q  239 tccgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||||||| ||||||||||| |||  ||||||||||||||||||||    
T  8113626 tccgtgagcttagctcagttggtaaggacaatgcataatatatgca 8113581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 284
Target Start/End: Original strand, 29631187 - 29631228
Alignment:
Q  243 tgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||| ||||||||||| |||| ||||||||||||||||||||    
T  29631187 tgagcttagctcagttggtatggacaatgcataatatatgca 29631228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 282
Target Start/End: Original strand, 46903907 - 46903948
Alignment:
Q  241 cgtgagattagctcagttagtatagacaatgcataatatatg 282  Q
    |||||||||| ||||||| |||| ||||||||||||||||||    
T  46903907 cgtgagattaactcagttggtatggacaatgcataatatatg 46903948  T

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Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 284
Target Start/End: Complemental strand, 51882268 - 51882219
Alignment:
Q  235 tgtctccgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||| ||||||| ||| ||||||| |||| ||||||||||||||||||||    
T  51882268 tgtccccgtgagcttaactcagttggtatggacaatgcataatatatgca 51882219  T

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Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 284
Target Start/End: Original strand, 2662098 - 2662134
Alignment:
Q  248 ttagctcagttagtatagacaatgcataatatatgca 284  Q
    ||||||||||| ||| |||||||||||||||||||||    
T  2662098 ttagctcagttggtaaagacaatgcataatatatgca 2662134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 284
Target Start/End: Complemental strand, 5702240 - 5702197
Alignment:
Q  240 ccgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    ||||||| ||||||||||| ||| |||||||||||||||||||||    
T  5702240 ccgtgagcttagctcagttggta-agacaatgcataatatatgca 5702197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 284
Target Start/End: Complemental strand, 24428528 - 24428492
Alignment:
Q  248 ttagctcagttagtatagacaatgcataatatatgca 284  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  24428528 ttagctcagttggtatggacaatgcataatatatgca 24428492  T

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Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 284
Target Start/End: Complemental strand, 25441555 - 25441519
Alignment:
Q  248 ttagctcagttagtatagacaatgcataatatatgca 284  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  25441555 ttagctcagttggtatggacaatgcataatatatgca 25441519  T

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Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 284
Target Start/End: Complemental strand, 30050479 - 30050447
Alignment:
Q  252 ctcagttagtatagacaatgcataatatatgca 284  Q
    |||||||||||| ||||||||||||||||||||    
T  30050479 ctcagttagtatggacaatgcataatatatgca 30050447  T

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Target: chr2 (Bit Score: 33; Significance: 0.000000002; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 282
Target Start/End: Original strand, 4238759 - 4238799
Alignment:
Q  242 gtgagattagctcagttagtatagacaatgcataatatatg 282  Q
    ||||| |||||||||||||||| ||||||||||||||||||    
T  4238759 gtgagcttagctcagttagtatggacaatgcataatatatg 4238799  T

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Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 284
Target Start/End: Original strand, 24593370 - 24593418
Alignment:
Q  236 gtctccgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    ||||||||||| ||||||||||| |||  ||||||||||||||||||||    
T  24593370 gtctccgtgagcttagctcagttggtaaggacaatgcataatatatgca 24593418  T

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Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 285
Target Start/End: Complemental strand, 36441221 - 36441185
Alignment:
Q  249 tagctcagttagtatagacaatgcataatatatgcat 285  Q
    |||||||||| ||||||||||||||||||||||||||    
T  36441221 tagctcagttggtatagacaatgcataatatatgcat 36441185  T

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Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 281
Target Start/End: Complemental strand, 40896571 - 40896531
Alignment:
Q  241 cgtgagattagctcagttagtatagacaatgcataatatat 281  Q
    |||||| ||||||||||| ||||||||||||||||||||||    
T  40896571 cgtgagcttagctcagttggtatagacaatgcataatatat 40896531  T

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Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 284
Target Start/End: Original strand, 7206124 - 7206167
Alignment:
Q  241 cgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||||| ||||||||||| ||| |||||||||||||||||||||    
T  7206124 cgtgagcttagctcagttggtagagacaatgcataatatatgca 7206167  T

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Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 284
Target Start/End: Complemental strand, 9383271 - 9383228
Alignment:
Q  241 cgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||||| ||||||||||| |||| ||||||||||||||||||||    
T  9383271 cgtgagcttagctcagttggtatggacaatgcataatatatgca 9383228  T

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Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 284
Target Start/End: Original strand, 22608526 - 22608569
Alignment:
Q  241 cgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||||| ||||||||||| ||| |||||||||||||||||||||    
T  22608526 cgtgagcttagctcagttggtagagacaatgcataatatatgca 22608569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 284
Target Start/End: Complemental strand, 34464471 - 34464428
Alignment:
Q  241 cgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||||| ||||||||||| |||| ||||||||||||||||||||    
T  34464471 cgtgagtttagctcagttggtatggacaatgcataatatatgca 34464428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 284
Target Start/End: Complemental strand, 30762556 - 30762514
Alignment:
Q  242 gtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    ||||| ||||||||||| ||||||||||||||||| |||||||    
T  30762556 gtgagtttagctcagttggtatagacaatgcataaaatatgca 30762514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 282
Target Start/End: Complemental strand, 4557833 - 4557792
Alignment:
Q  241 cgtgagattagctcagttagtatagacaatgcataatatatg 282  Q
    ||||||||||||  |||| |||||||||||||||||||||||    
T  4557833 cgtgagattagcaaagttggtatagacaatgcataatatatg 4557792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 12124538 - 12124587
Alignment:
Q  235 tgtctccgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||| ||||||| ||||||||||| |||  ||||||||||||||||||||    
T  12124538 tgtccccgtgagtttagctcagttggtaaggacaatgcataatatatgca 12124587  T

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Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 284
Target Start/End: Original strand, 7350552 - 7350588
Alignment:
Q  248 ttagctcagttagtatagacaatgcataatatatgca 284  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  7350552 ttagctcagttggtatggacaatgcataatatatgca 7350588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 281
Target Start/End: Complemental strand, 9517071 - 9517031
Alignment:
Q  241 cgtgagattagctcagttagtatagacaatgcataatatat 281  Q
    |||||||||||||||||| ||||  ||||||||||||||||    
T  9517071 cgtgagattagctcagttggtatgaacaatgcataatatat 9517031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 284
Target Start/End: Original strand, 9686463 - 9686499
Alignment:
Q  248 ttagctcagttagtatagacaatgcataatatatgca 284  Q
    ||||||||||| ||||||||||| |||||||||||||    
T  9686463 ttagctcagttggtatagacaatacataatatatgca 9686499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 284
Target Start/End: Original strand, 15617658 - 15617694
Alignment:
Q  248 ttagctcagttagtatagacaatgcataatatatgca 284  Q
    |||||||||||||||| || |||||||||||||||||    
T  15617658 ttagctcagttagtatggataatgcataatatatgca 15617694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 284
Target Start/End: Complemental strand, 18231536 - 18231492
Alignment:
Q  240 ccgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    ||||||| ||||||||||| |||  ||||||||||||||||||||    
T  18231536 ccgtgagcttagctcagttggtaaggacaatgcataatatatgca 18231492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 284
Target Start/End: Complemental strand, 19179113 - 19179069
Alignment:
Q  240 ccgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    ||||||| ||||||||||| |||  ||||||||||||||||||||    
T  19179113 ccgtgagcttagctcagttggtaaggacaatgcataatatatgca 19179069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 284
Target Start/End: Original strand, 22520207 - 22520259
Alignment:
Q  232 ttatgtctccgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    ||||||| ||||||| |||| ||||||||||   |||||||||||||||||||    
T  22520207 ttatgtccccgtgagcttagttcagttagtaagaacaatgcataatatatgca 22520259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 284
Target Start/End: Complemental strand, 22571920 - 22571884
Alignment:
Q  248 ttagctcagttagtatagacaatgcataatatatgca 284  Q
    |||||||||||  ||||||||||||||||||||||||    
T  22571920 ttagctcagttgatatagacaatgcataatatatgca 22571884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 284
Target Start/End: Complemental strand, 24305372 - 24305324
Alignment:
Q  236 gtctccgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||| |||||| |||||||||||| ||| |||||||||||| |||||||    
T  24305372 gtcttcgtgagcttagctcagttaatatggacaatgcataaaatatgca 24305324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 284
Target Start/End: Original strand, 24393736 - 24393780
Alignment:
Q  240 ccgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    ||||||| |||||||||||||||  ||||||||||||| ||||||    
T  24393736 ccgtgagtttagctcagttagtaaggacaatgcataatgtatgca 24393780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 286
Target Start/End: Complemental strand, 24520700 - 24520656
Alignment:
Q  242 gtgagattagctcagttagtatagacaatgcataatatatgcatg 286  Q
    ||||| |||||| |||| ||| |||||||||||||||||||||||    
T  24520700 gtgagcttagcttagttggtaaagacaatgcataatatatgcatg 24520656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 284
Target Start/End: Complemental strand, 25598617 - 25598581
Alignment:
Q  248 ttagctcagttagtatagacaatgcataatatatgca 284  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  25598617 ttagctcagttggtatggacaatgcataatatatgca 25598581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 284
Target Start/End: Original strand, 28771580 - 28771624
Alignment:
Q  240 ccgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    ||||||| ||||||||||| |||  ||||||||||||||||||||    
T  28771580 ccgtgagtttagctcagttggtaaggacaatgcataatatatgca 28771624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 284
Target Start/End: Complemental strand, 40099454 - 40099402
Alignment:
Q  232 ttatgtctccgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    ||||||| || |||| ||||||||||| |||  ||||||||||||||||||||    
T  40099454 ttatgtccccatgagcttagctcagttggtaaggacaatgcataatatatgca 40099402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 284
Target Start/End: Original strand, 42066702 - 42066754
Alignment:
Q  232 ttatgtctccgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||||||  |||||| ||||||||||| |||| ||||||||| ||||||||||    
T  42066702 ttatgtcatcgtgagcttagctcagttggtatggacaatgcacaatatatgca 42066754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 284
Target Start/End: Original strand, 39997 - 40040
Alignment:
Q  241 cgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||||| ||||||||||| |||| ||||||||||||||||||||    
T  39997 cgtgagcttagctcagttggtatggacaatgcataatatatgca 40040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 32; Significance: 0.000000008; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 284
Target Start/End: Complemental strand, 2186395 - 2186352
Alignment:
Q  241 cgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||||| ||||||||||| |||| ||||||||||||||||||||    
T  2186395 cgtgagcttagctcagttggtatggacaatgcataatatatgca 2186352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 243 - 286
Target Start/End: Original strand, 10519136 - 10519179
Alignment:
Q  243 tgagattagctcagttagtatagacaatgcataatatatgcatg 286  Q
    |||| ||||||||||| |||||||||||||||||||||| ||||    
T  10519136 tgagcttagctcagttggtatagacaatgcataatatatacatg 10519179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 284
Target Start/End: Complemental strand, 12671810 - 12671767
Alignment:
Q  241 cgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||||| ||||||||||| ||||||||||||||||| |||||||    
T  12671810 cgtgagtttagctcagttggtatagacaatgcataaaatatgca 12671767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 284
Target Start/End: Complemental strand, 21317400 - 21317357
Alignment:
Q  241 cgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||||| ||||||||||| ||| |||||||||||||||||||||    
T  21317400 cgtgagcttagctcagttggtagagacaatgcataatatatgca 21317357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 284
Target Start/End: Original strand, 32180829 - 32180872
Alignment:
Q  241 cgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||||| ||||||||||| ||||||||||||||||| |||||||    
T  32180829 cgtgagcttagctcagttggtatagacaatgcataaaatatgca 32180872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 284
Target Start/End: Original strand, 37193248 - 37193291
Alignment:
Q  241 cgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||||| |||||||||||||||| ||||||| ||||||||||||    
T  37193248 cgtgagcttagctcagttagtatggacaatgtataatatatgca 37193291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 284
Target Start/End: Complemental strand, 52270092 - 52270049
Alignment:
Q  241 cgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||||| ||||||||||| |||| ||||||||||||||||||||    
T  52270092 cgtgagcttagctcagttggtatggacaatgcataatatatgca 52270049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 284
Target Start/End: Original strand, 6087747 - 6087789
Alignment:
Q  242 gtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    ||||| ||||||||||| ||||||| |||||||||||||||||    
T  6087747 gtgagcttagctcagttggtatagataatgcataatatatgca 6087789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 284
Target Start/End: Original strand, 19854565 - 19854607
Alignment:
Q  242 gtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    ||||| ||||||||||| |||| ||||||||||||||||||||    
T  19854565 gtgagcttagctcagttggtatggacaatgcataatatatgca 19854607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 284
Target Start/End: Original strand, 20383488 - 20383530
Alignment:
Q  242 gtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    ||||| ||||||||||| |||| ||||||||||||||||||||    
T  20383488 gtgagcttagctcagttggtatggacaatgcataatatatgca 20383530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 284
Target Start/End: Complemental strand, 28435309 - 28435267
Alignment:
Q  242 gtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    ||||| ||||||||||| |||| ||||||||||||||||||||    
T  28435309 gtgagtttagctcagttggtatggacaatgcataatatatgca 28435267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 284
Target Start/End: Complemental strand, 11949823 - 11949782
Alignment:
Q  243 tgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||| ||||||||||| |||| ||||||||||||||||||||    
T  11949823 tgagcttagctcagttggtatggacaatgcataatatatgca 11949782  T

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Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 284
Target Start/End: Original strand, 31760247 - 31760288
Alignment:
Q  243 tgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||| ||||||||||| |||||||||||| ||||||||||||    
T  31760247 tgagcttagctcagttggtatagacaatgtataatatatgca 31760288  T

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Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 284
Target Start/End: Original strand, 37921747 - 37921788
Alignment:
Q  243 tgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||| |||||||||||||||  ||||||||||||||||||||    
T  37921747 tgagtttagctcagttagtaaggacaatgcataatatatgca 37921788  T

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Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 282
Target Start/End: Original strand, 54500568 - 54500609
Alignment:
Q  241 cgtgagattagctcagttagtatagacaatgcataatatatg 282  Q
    |||||| ||||||||||| ||| |||||||||||||||||||    
T  54500568 cgtgagcttagctcagttggtagagacaatgcataatatatg 54500609  T

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Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 284
Target Start/End: Original strand, 6520081 - 6520113
Alignment:
Q  252 ctcagttagtatagacaatgcataatatatgca 284  Q
    ||||||||||| |||||||||||||||||||||    
T  6520081 ctcagttagtaaagacaatgcataatatatgca 6520113  T

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Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 284
Target Start/End: Complemental strand, 16304153 - 16304117
Alignment:
Q  248 ttagctcagttagtatagacaatgcataatatatgca 284  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  16304153 ttagctcagttggtatggacaatgcataatatatgca 16304117  T

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Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 286
Target Start/End: Complemental strand, 18915115 - 18915063
Alignment:
Q  234 atgtctccgtgagattagctcagttagtatagacaatgcataatatatgcatg 286  Q
    ||||| ||||||| ||||||||||| |||  ||||||||||||||||| ||||    
T  18915115 atgtccccgtgagtttagctcagttggtaaggacaatgcataatatattcatg 18915063  T

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Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 284
Target Start/End: Complemental strand, 22279587 - 22279539
Alignment:
Q  236 gtctccgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||||| |||| ||||||||||| |||  ||||||||||||||||||||    
T  22279587 gtctccatgagcttagctcagttggtaaggacaatgcataatatatgca 22279539  T

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Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 284
Target Start/End: Complemental strand, 22630431 - 22630379
Alignment:
Q  232 ttatgtctccgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||||||  |||||||||| ||||||| |||  ||||||||||||||||||||    
T  22630431 ttatgtcctcgtgagattatctcagttggtagtgacaatgcataatatatgca 22630379  T

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Target: scaffold0117 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 18286 - 18335
Alignment:
Q  235 tgtctccgtgagattagctcagttagtatagacaatgcataatatatgca 284  Q
    |||||||||||| ||||||||||| |||  ||||||| ||||||||||||    
T  18286 tgtctccgtgagcttagctcagttggtaaggacaatgtataatatatgca 18335  T

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Target: scaffold0006 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 286
Target Start/End: Complemental strand, 223739 - 223694
Alignment:
Q  241 cgtgagattagctcagttagtatagacaatgcataatatatgcatg 286  Q
    |||||| |||||||||||||| |  |||||||||||||||||||||    
T  223739 cgtgagcttagctcagttagtttgaacaatgcataatatatgcatg 223694  T

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Target: scaffold0197 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 281
Target Start/End: Complemental strand, 21817 - 21777
Alignment:
Q  241 cgtgagattagctcagttagtatagacaatgcataatatat 281  Q
    |||||| ||||||||||| ||||||||||||||||| ||||    
T  21817 cgtgagcttagctcagttggtatagacaatgcataaaatat 21777  T

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Target: scaffold0122 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 284
Target Start/End: Complemental strand, 31210 - 31174
Alignment:
Q  248 ttagctcagttagtatagacaatgcataatatatgca 284  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  31210 ttagctcagttggtatggacaatgcataatatatgca 31174  T

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