View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19382_low_61 (Length: 302)

Name: NF19382_low_61
Description: NF19382
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19382_low_61
NF19382_low_61
[»] chr7 (1 HSPs)
chr7 (6-302)||(22636658-22636954)


Alignment Details
Target: chr7 (Bit Score: 281; Significance: 1e-157; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 6 - 302
Target Start/End: Complemental strand, 22636954 - 22636658
Alignment:
Q  6 cataggccaaagaggaacattgtggtatcatgcacatatttcatggcttagatcaactcttcatggccctattgtcattcttcccaaaaagcatgtgcct 105  Q
    |||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  22636954 cataggacaaaggggaacattgtggtatcatgcacacatttcatggcttagatctactcttcatggccctattgtcattcttcccaaaaagcatgtgcct 22636855  T
Q  106 tacccattccctcatcctttcaaacaaatcccaattgtattaggtaagttaagaccactcaaaatatgtcacacattttaatattaactctacatattat 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22636854 tacccattccctcatcctttcaaacaaatcccaattgtattaggtaagttaagaccactcaaaatatgtcacacattttaatattaactctacatattat 22636755  T
Q  206 aagtgtacattttttatttcctaaattagtatattaactttgataacatgataggggagtggtggaaagcagacacagaagcagttataaatcaagc 302  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22636754 aagtgtacattttttatttcctaaattagtatattaactttgataacatgataggggagtggtggaaagcagacacagaagcagttataaatcaagc 22636658  T

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