View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19382_low_65 (Length: 299)
Name: NF19382_low_65
Description: NF19382
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19382_low_65 |
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Alignment Details
Target: chr3 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 23 - 280
Target Start/End: Original strand, 33360261 - 33360517
Alignment:
| Q |
23 |
tcgattttcactatgtcaatctttatgtgccacatatcactgtactacttgtgtaacaaattcaatcaataaatataaattctatgaaaagtacttttct |
122 |
Q |
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| T |
33360261 |
tcgattttcactatgttaatctttatgtgccacatatcattgtactacttgtgtaacaaattcaatcaataaatataaattctatgaaaagtacttttct |
33360360 |
T |
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| Q |
123 |
tctatcatgtaacgaatcatatatatgataacatacaaatttcataaaattaaaaataaaaggtagagaacaatagtgaaagtgtggaacctgataggtc |
222 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
33360361 |
tctatcatgtaacgaatcatatatatgataacatacaaatttcataaaattaaaaataaaaggtagagaac-atagtgaaagtgtggaacctgataggtc |
33360459 |
T |
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| Q |
223 |
ggagtttgtcactgtgggagggattggaagcaatagagactgcattatttttgccaag |
280 |
Q |
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|||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
33360460 |
ggagcttgtcactgtgggagggattggaaacaatagagactgcattatttttgccaag |
33360517 |
T |
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