View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19382_low_94 (Length: 227)
Name: NF19382_low_94
Description: NF19382
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19382_low_94 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 141; Significance: 4e-74; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 87 - 227
Target Start/End: Original strand, 41415133 - 41415273
Alignment:
| Q |
87 |
gcacccttcaaactatttgatacttgtttgactaatctaaagataggttttaaattggaaacaaagtttccttctttcatagaaaaaatttacttgtgtt |
186 |
Q |
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| T |
41415133 |
gcacccttcaaactatttgatacttgtttgactaatctaaagataggttttaaattggaaacaaagtttccttctttcatagaaaaaatttacttgtgtt |
41415232 |
T |
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| Q |
187 |
ctaaaccaataaaggaaaaaatgttttatctgctaagtatt |
227 |
Q |
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| T |
41415233 |
ctaaaccaataaaggaaaaaatgttttatctgctaagtatt |
41415273 |
T |
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