View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19385_high_13 (Length: 201)
Name: NF19385_high_13
Description: NF19385
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19385_high_13 |
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Alignment Details
Target: chr1 (Bit Score: 158; Significance: 3e-84; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 19 - 184
Target Start/End: Complemental strand, 44374474 - 44374309
Alignment:
| Q |
19 |
ggattcaggatcaagttgtaaattgcaatgatcaatgaggtatggagattttaatttatgattttcttctgaataatgtatattgtatttgttgtaatca |
118 |
Q |
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| T |
44374474 |
ggattcaggatcaagttgtaaattgcaatggtcaatgaggtatggagattttaatttatgattttcttctgaataatgtatatagtatttgttgtaatca |
44374375 |
T |
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| Q |
119 |
gaggaatttccatgtgcttgaagtccaaacacaagaaatgggatatatagtggttttgcattatat |
184 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44374374 |
gaggaatttccatgtgcttgaagtccaaacacaagaaatgggatatatagtggttttgcattatat |
44374309 |
T |
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