View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19385_low_6 (Length: 327)
Name: NF19385_low_6
Description: NF19385
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19385_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 279; Significance: 1e-156; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 10 - 309
Target Start/End: Complemental strand, 43413102 - 43412807
Alignment:
| Q |
10 |
aagaatatgaatcagtctggcttgcttcaattggtctcaagtgattctgatttgagaaagccggtactattttgttataatttacttccttcgcgttagg |
109 |
Q |
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| T |
43413102 |
aagaatatgaatcagtctggcttgcttcaattggtctcaagtgattctgatttgagaaagccggtactattttgttataatttacttccttcgcgttagg |
43413003 |
T |
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| Q |
110 |
atctgttcctgtgtgcctgaaggaaccaaaaggaaataaaagtgtcaaacaaatatattgtaaactacattttctgatacatacatgccttgtattctca |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |
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| T |
43413002 |
atctgttcctgtgtgcctgaaggaaccaaaaggaaataaaagtgtcaaacaaatatattgtaaactacattttctgat----acatgccttgtattttca |
43412907 |
T |
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| Q |
210 |
aacaatcatatgtaacactatatatacaaaaacataatttttgtaattgtttgtctaattaaccattcaagaatctcacattgtatagcaatatagtcta |
309 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43412906 |
aacaatcatatgtaacactatatatacaaaaacataatttttgtaattgtttgtctaattaaccattcaagaatctcacattgtatagcaatatagtcta |
43412807 |
T |
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