View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19387_high_1 (Length: 730)
Name: NF19387_high_1
Description: NF19387
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19387_high_1 |
 | |
|
Alignment Details
Target: chr5 (Bit Score: 474; Significance: 0; HSPs: 20)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 474; E-Value: 0
Query Start/End: Original strand, 31 - 713
Target Start/End: Original strand, 30712958 - 30713640
Alignment:
| Q |
31 |
gtggcaataggaaaggagatagtaaagaaatgtaatggattgcctcttgcagcaaaatcattgggaagtttaatgaactcaaggaaagatgaaaaggaat |
130 |
Q |
| |
|
|||| ||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||| |||| |||| ||||||||| || ||||| |||| |
|
|
| T |
30712958 |
gtggaaataggaaaggagatagcaaagaaatgtaatggattgccacttgcagcaaaagcattggggggtttgatgagctcaaggaatgaagaaaatgaat |
30713057 |
T |
|
| Q |
131 |
ggcttaaaattaaagacagtgaactttgggatttatcagatgaaaattccattttgcctgctttgaggttgagttacttatatttaccggcagccctaaa |
230 |
Q |
| |
|
||||| | |||||||||||||| ||||||| |||| || | |||||||| |||||||||||||||||| |||||||||| |||||| | || ||||||| |
|
|
| T |
30713058 |
ggcttgatattaaagacagtgagctttgggctttaccacaagaaaattctattttgcctgctttgaggctgagttacttttatttatcaccaaccctaaa |
30713157 |
T |
|
| Q |
231 |
acaatgtttctctttttgtgctatatttcccaaagatacagatatcctaaaggaagaattgatttggctttggatggctaatggattgatttcatctagg |
330 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||| ||| |||||||| |||||||||||| | |||||||||||||||||||| |||||||||| | |
|
|
| T |
30713158 |
gcaatgtttctctttttgtgctatatttcccaaggatagagaaatcctaaaagaagaattgattcgactttggatggctaatggatttatttcatctatg |
30713257 |
T |
|
| Q |
331 |
ggtaatacggaggttgaagatgttggcatcatggtttgggatgaattgtaccaaaaatcattctttcaagattgcaagatggatgaatattctggaaaca |
430 |
Q |
| |
|
|||||| ||| |||||||||||||| | |||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
30713258 |
ggtaatttggacgttgaagatgttggaaacatggtttggaaggaattgtaccaaaaatcattcttccaagattgcaagatggatgaatattctggaaaca |
30713357 |
T |
|
| Q |
431 |
gttcttttaaaatgcatgatattgtccatgatctcgctcaatcagtaacggggaaagaatgtgtgtatttggagaatgcaaacatgactaatttgacaaa |
530 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30713358 |
tttcttttaaaatgcatgatcttgtccatgatctcgctcaatcagtaacggggaaagaatgtgtgtatttggagaatgcaaacatgactaatttgacaaa |
30713457 |
T |
|
| Q |
531 |
aaacacacaccacataagttttcactctgaaaatttgttatcattcgatgagggtgccttcaaaaaagttgaatccttacgaacattgtttgacttggag |
630 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30713458 |
aaacacacaccacataagttttcactctgaaaaattgttatcattcgatgagggtgccttcaaaaaagttgaatccttacgaacattgtttgacttggag |
30713557 |
T |
|
| Q |
631 |
aattatattgcnnnnnnncatgatcccttcccattaaacagctctcttcgagttttaagcacatcctctctacaggtcccagt |
713 |
Q |
| |
|
||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
30713558 |
aattatattgcaaaaaaacatgatcacttcccattaaacagctctcttcgagttttaagcacatcctttctacaggtcccagt |
30713640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 451; E-Value: 0
Query Start/End: Original strand, 1 - 623
Target Start/End: Complemental strand, 30060972 - 30060350
Alignment:
| Q |
1 |
ggacattacaaagaagagcgtgctgatctcgtggcaataggaaaggagatagtaaagaaatgtaatggattgcctcttgcagcaaaatcattgggaagtt |
100 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30060972 |
ggacatcacaaagaagagcgtgctgatctcgtggcaataggaaaggagatagtaaagaaatgcaatggattgcctcttgcagcaaaatcattgggaagtt |
30060873 |
T |
|
| Q |
101 |
taatgaactcaaggaaagatgaaaaggaatggcttaaaattaaagacagtgaactttgggatttatcagatgaaaattccattttgcctgctttgaggtt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30060872 |
taatgaactcaaggaaagatgaaaaggaatggcttaaaattaaagacagtgaactttgggatttatcagatgaaaattccattttgcctgctttgaggtt |
30060773 |
T |
|
| Q |
201 |
gagttacttatatttaccggcagccctaaaacaatgtttctctttttgtgctatatttcccaaagatacagatatcctaaaggaagaattgatttggctt |
300 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |
|
|
| T |
30060772 |
gagttacttttatttaccggcagccctaaaacaatgtttctctttttgtgctatatttcccaaagatgcagaaatcctaaaggaagaattgatttggctt |
30060673 |
T |
|
| Q |
301 |
tggatggctaatggattgatttcatctaggggtaatacggaggttgaagatgttggcatcatggtttgggatgaattgtaccaaaaatcattctttcaag |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
30060672 |
tggatggctaatggattgatttcatctaggggtactacggaggttgaagatgttggcatcatggtgtgggatgaattgtaccaaaaatcattctttcaag |
30060573 |
T |
|
| Q |
401 |
attgcaagatggatgaatattctggaaacagttcttttaaaatgcatgatattgtccatgatctcgctcaatcagtaacggggaaagaatgtgtgtattt |
500 |
Q |
| |
|
|| | || |||||||||| |||||| ||| ||| || || |||||||| ||||||||||||| ||||||||||||| |||| |||||||| ||||||| |
|
|
| T |
30060572 |
atagaaaaatggatgaattttctggcgacatttcattcaagatgcatgaccttgtccatgatcttgctcaatcagtaatggggcaagaatgtatgtattt |
30060473 |
T |
|
| Q |
501 |
ggagaatgcaaacatgactaatttgacaaaaaacacacaccacataagttttcactctgaaaatttgttatcattcgatgagggtgccttcaaaaaagtt |
600 |
Q |
| |
|
||||||||||||| |||||| |||| |||||| |||||||||||| |||||| || | || | | |||||| ||||| ||| ||| ||||||| |||| |
|
|
| T |
30060472 |
ggagaatgcaaacttgactagtttgtcaaaaagcacacaccacattagttttgacaataaagactcgttatccttcgacaaggatgctttcaaaatagtt |
30060373 |
T |
|
| Q |
601 |
gaatccttacgaacattgtttga |
623 |
Q |
| |
|
|||||||| ||||||| |||||| |
|
|
| T |
30060372 |
gaatccttgcgaacatggtttga |
30060350 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 442; E-Value: 0
Query Start/End: Original strand, 31 - 713
Target Start/End: Complemental strand, 30436389 - 30435707
Alignment:
| Q |
31 |
gtggcaataggaaaggagatagtaaagaaatgtaatggattgcctcttgcagcaaaatcattgggaagtttaatgaactcaaggaaagatgaaaaggaat |
130 |
Q |
| |
|
|||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||| ||||||||| || |||||||||| |
|
|
| T |
30436389 |
gtggaaattggaaaggagatagtaaagaaatgtaatggattgcctcttgcagcaaaagcattggggggtttgatgagctcaaggaatgaagaaaaggaat |
30436290 |
T |
|
| Q |
131 |
ggcttaaaattaaagacagtgaactttgggatttatcagatgaaaattccattttgcctgctttgaggttgagttacttatatttaccggcagccctaaa |
230 |
Q |
| |
|
||||| | |||||||||||||| ||||||| |||| || | |||||||| |||||||| |||||||| ||||||||||| |||||| | || ||||||| |
|
|
| T |
30436289 |
ggcttgatattaaagacagtgagctttgggctttaccacaagaaaattctattttgcccgctttgagattgagttacttttatttaacaccaaccctaaa |
30436190 |
T |
|
| Q |
231 |
acaatgtttctctttttgtgctatatttcccaaagatacagatatcctaaaggaagaattgatttggctttggatggctaatggattgatttcatctagg |
330 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||| ||| |||||||| |||||||||||| | |||||||||||||||| ||| |||||||||| | |
|
|
| T |
30436189 |
gcaatgtttctctttttgtgctatatttcccaaggatagagaaatcctaaaagaagaattgattcgactttggatggctaatgaatttatttcatctatg |
30436090 |
T |
|
| Q |
331 |
ggtaatacggaggttgaagatgttggcatcatggtttgggatgaattgtaccaaaaatcattctttcaagattgcaagatggatgaatattctggaaaca |
430 |
Q |
| |
|
|||||| ||| |||||||||||||| | ||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||| |
|
|
| T |
30436089 |
ggtaatttggacgttgaagatgttggaaaaatggtttggaaggaattgtaccaaaaatcattctttcaagatagcaagatggatgaatattttggagaca |
30435990 |
T |
|
| Q |
431 |
gttcttttaaaatgcatgatattgtccatgatctcgctcaatcagtaacggggaaagaatgtgtgtatttggagaatgcaaacatgactaatttgacaaa |
530 |
Q |
| |
|
|||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30435989 |
tttctttcaagatgcatgatcttgtccatgatctcgctcaatcagtaacggggaaagaatgtatgtatttggagaatgcaaacatgactaatttgacaaa |
30435890 |
T |
|
| Q |
531 |
aaacacacaccacataagttttcactctgaaaatttgttatcattcgatgagggtgccttcaaaaaagttgaatccttacgaacattgtttgacttggag |
630 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30435889 |
aaacacacaccacataagttttaactctgaaaatttgttatcattcgatgagggtgccttcaaaaaagttgaatccttacgaacattgtttgacttggag |
30435790 |
T |
|
| Q |
631 |
aattatattgcnnnnnnncatgatcccttcccattaaacagctctcttcgagttttaagcacatcctctctacaggtcccagt |
713 |
Q |
| |
|
||||||||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |
|
|
| T |
30435789 |
aattatattccaaaaaaacatgatcacttcccattaaacagctctcttcgagttttaagcacatcctctctacaaggcccagt |
30435707 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 435; E-Value: 0
Query Start/End: Original strand, 1 - 623
Target Start/End: Complemental strand, 30750246 - 30749624
Alignment:
| Q |
1 |
ggacattacaaagaagagcgtgctgatctcgtggcaataggaaaggagatagtaaagaaatgtaatggattgcctcttgcagcaaaatcattgggaagtt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
30750246 |
ggacattacaaagaagagcgtgctgatctcgtggcaataggaaaggagatagtaaagaaatgtaatggattgcctcttgcagcaaaagcattgggaagtt |
30750147 |
T |
|
| Q |
101 |
taatgaactcaaggaaagatgaaaaggaatggcttaaaattaaagacagtgaactttgggatttatcagatgaaaattccattttgcctgctttgaggtt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30750146 |
taatgaactcaaggaaagatgaaaaggaatggcttaaaattaaagatagtgaactttgggatttatcagatgaaaattccattttgcctgctttgaggtt |
30750047 |
T |
|
| Q |
201 |
gagttacttatatttaccggcagccctaaaacaatgtttctctttttgtgctatatttcccaaagatacagatatcctaaaggaagaattgatttggctt |
300 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||| |
|
|
| T |
30750046 |
gagttacttttatttaccggcagccctaaaacaatgtttctctttttgtgctatatttcccaaagatgcagaaatcctaaaggaaaaattgatttggctt |
30749947 |
T |
|
| Q |
301 |
tggatggctaatggattgatttcatctaggggtaatacggaggttgaagatgttggcatcatggtttgggatgaattgtaccaaaaatcattctttcaag |
400 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
30749946 |
tggatggctaatggattgatttcatctaggggtaatatggaggttgaagatgttggcatcatggtttgggatgaattgtatcaaaaatcattctttcaag |
30749847 |
T |
|
| Q |
401 |
attgcaagatggatgaatattctggaaacagttcttttaaaatgcatgatattgtccatgatctcgctcaatcagtaacggggaaagaatgtgtgtattt |
500 |
Q |
| |
|
|| | || |||||||||| |||||| ||| ||| || || || |||||| ||||||||||||| ||||||||||||| |||| |||||||| ||||||| |
|
|
| T |
30749846 |
atagaaaaatggatgaattttctggcgacatttcattcaagattcatgatcttgtccatgatcttgctcaatcagtaatggggcaagaatgtatgtattt |
30749747 |
T |
|
| Q |
501 |
ggagaatgcaaacatgactaatttgacaaaaaacacacaccacataagttttcactctgaaaatttgttatcattcgatgagggtgccttcaaaaaagtt |
600 |
Q |
| |
|
||||||||||||| |||||| |||| | |||| ||||||||| || |||||| || | | | | |||||| ||||| ||| ||| ||||||| |||| |
|
|
| T |
30749746 |
ggagaatgcaaacttgactagtttgtcgaaaagcacacaccatattagttttgacaataacgactcgttatccttcgacaaggatgctttcaaaatagtt |
30749647 |
T |
|
| Q |
601 |
gaatccttacgaacattgtttga |
623 |
Q |
| |
|
|||||||| ||||||| |||||| |
|
|
| T |
30749646 |
gaatccttgcgaacatggtttga |
30749624 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 355; E-Value: 0
Query Start/End: Original strand, 1 - 623
Target Start/End: Complemental strand, 30400677 - 30400055
Alignment:
| Q |
1 |
ggacattacaaagaagagcgtgctgatctcgtggcaataggaaaggagatagtaaagaaatgtaatggattgcctcttgcagcaaaatcattgggaagtt |
100 |
Q |
| |
|
|||||||| | |||||||||||| || || || |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |
|
|
| T |
30400677 |
ggacattatagagaagagcgtgcagaacttgtagcaataggaaaggagatagtaaagaaatgtaatggattgcctcttgcagcaaaagcattgggaggtt |
30400578 |
T |
|
| Q |
101 |
taatgaactcaaggaaagatgaaaaggaatggcttaaaattaaagacagtgaactttgggatttatcagatgaaaattccattttgcctgctttgaggtt |
200 |
Q |
| |
|
| |||| ||||||||| | ||||||||||||||| | |||||||||| ||| ||||||| |||| |||| ||||||| ||||||| | |||||||||| |
|
|
| T |
30400577 |
tgatgagctcaaggaatggagaaaaggaatggcttgatattaaagacactgagctttgggctttaccagaagaaaattatattttgcgttctttgaggtt |
30400478 |
T |
|
| Q |
201 |
gagttacttatatttaccggcagccctaaaacaatgtttctctttttgtgctatatttcccaaagatacagatatcctaaaggaagaattgatttggctt |
300 |
Q |
| |
|
||||||||| |||||| | | ||||||| |||||||||||||||||||||||||||||||| |||| || ||| | || |||||||||||| |||| |
|
|
| T |
30400477 |
gagttacttttatttaacaccgaccctaaagcaatgtttctctttttgtgctatatttcccaaggatagggaaatcttgaaagaagaattgattcagctt |
30400378 |
T |
|
| Q |
301 |
tggatggctaatggattgatttcatctaggggtaatacggaggttgaagatgttggcatcatggtttgggatgaattgtaccaaaaatcattctttcaag |
400 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30400377 |
tggatggctaatggattgatttcatcttggggtaatacggaggttgaagatgttggcatcatggtttgggatgaattgtaccaaaaatcattctttcaag |
30400278 |
T |
|
| Q |
401 |
attgcaagatggatgaatattctggaaacagttcttttaaaatgcatgatattgtccatgatctcgctcaatcagtaacggggaaagaatgtgtgtattt |
500 |
Q |
| |
|
| || |||||||||| |||||| |||| ||| || || ||||||||| ||||||||||||||||| | ||||||| |||| |||||||| | ||||| |
|
|
| T |
30400277 |
acaaaaaaatggatgaattttctggcaacatttcattcaagatgcatgatcttgtccatgatctcgctaagtcagtaatggggcaagaatgtatatattt |
30400178 |
T |
|
| Q |
501 |
ggagaatgcaaacatgactaatttgacaaaaaacacacaccacataagttttcactctgaaaatttgttatcattcgatgagggtgccttcaaaaaagtt |
600 |
Q |
| |
|
|||||||||||||||||||| |||| |||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
30400177 |
ggagaatgcaaacatgactagtttgtcaaaaagcacacaccacataagttttaactctgataatttgttatcattcgatgagggtgccttcagaaaagtt |
30400078 |
T |
|
| Q |
601 |
gaatccttacgaacattgtttga |
623 |
Q |
| |
|
|||||||| ||||||| |||||| |
|
|
| T |
30400077 |
gaatccttgcgaacatggtttga |
30400055 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 342; E-Value: 0
Query Start/End: Original strand, 31 - 620
Target Start/End: Complemental strand, 29853884 - 29853295
Alignment:
| Q |
31 |
gtggcaataggaaaggagatagtaaagaaatgtaatggattgcctcttgcagcaaaatcattgggaagtttaatgaactcaaggaaagatgaaaaggaat |
130 |
Q |
| |
|
|||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| |||| |||| ||||||||| || |||||||||| |
|
|
| T |
29853884 |
gtggaaataggaaaggagattgtaaagaaatgtaatggattgcctcttgcagcaaaaacattgggaggtttgatgagctcaaggaatgaagaaaaggaat |
29853785 |
T |
|
| Q |
131 |
ggcttaaaattaaagacagtgaactttgggatttatcagatgaaaattccattttgcctgctttgaggttgagttacttatatttaccggcagccctaaa |
230 |
Q |
| |
|
||||| | |||||||||||||| ||||||| |||| || | |||||||| ||||||| ||||||||||||||||||||| |||||| | || ||||||| |
|
|
| T |
29853784 |
ggcttgatattaaagacagtgagctttgggctttaccacaagaaaattctattttgcttgctttgaggttgagttacttttatttaacaccaaccctaaa |
29853685 |
T |
|
| Q |
231 |
acaatgtttctctttttgtgctatatttcccaaagatacagatatcctaaaggaagaattgatttggctttggatggctaatggattgatttcatctagg |
330 |
Q |
| |
|
|||||||||||| ||||| |||||||||||||| ||| ||| ||||| || |||||||||||| |||||||||||||||||||| |||||||||| | |
|
|
| T |
29853684 |
acaatgtttctccttttgcgctatatttcccaaggatggagaaatcctgaaagaagaattgattcaactttggatggctaatggatttatttcatctaag |
29853585 |
T |
|
| Q |
331 |
ggtaatacggaggttgaagatgttggcatcatggtttgggatgaattgtaccaaaaatcattctttcaagattgcaagatggatgaatattctggaaaca |
430 |
Q |
| |
|
|||||| ||| |||||||||||||| | ||||||||| | |||||||||||||| ||||||||||||||| ||||||||||||||| |||||| ||| |
|
|
| T |
29853584 |
ggtaatttggacgttgaagatgttggaaatatggtttggaaggaattgtaccaaaagtcattctttcaagatatcaagatggatgaatactctggagaca |
29853485 |
T |
|
| Q |
431 |
gttcttttaaaatgcatgatattgtccatgatctcgctcaatcagtaacggggaaagaatgtgtgtatttggagaatgcaaacatgactaatttgacaaa |
530 |
Q |
| |
|
|| ||| || ||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
29853484 |
tttttttcaagatgcatgatcttgtccatgatctcgctcaatcagtaatggggcaagaatgtgtgtatttggagaatgcaaacatgactagtttgacaaa |
29853385 |
T |
|
| Q |
531 |
aaacacacaccacataagttttcactctgaaaatttgttatcattcgatgagggtgccttcaaaaaagttgaatccttacgaacattgtt |
620 |
Q |
| |
|
|| ||||||||||||||||||| |||| || ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
29853384 |
aagcacacaccacataagttttaactccgataatttgttatcattcgatgagggtgcctttaaaaaagttgaatccttgcgaacattgtt |
29853295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 40 - 632
Target Start/End: Complemental strand, 30483965 - 30483376
Alignment:
| Q |
40 |
ggaaaggagatagtaaagaaatgtaatggattgcctcttgcagcaaaatcattgggaagtttaatgaactcaaggaaagatgaaaaggaatggcttaaaa |
139 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||| ||| || ||||||||||||||| | | |
|
|
| T |
30483965 |
ggaaaggagatagtaaagaaatgtaatggattgcctcttgcagcaaaagcattggggggtttaatggtctcaatgaatgaagaaaaggaatggcttgata |
30483866 |
T |
|
| Q |
140 |
ttaaagacagtgaactttgggatttatcagatgaaaattccattttgcctgctttgaggttgagttacttatatttaccggcagccctaaaacaatgttt |
239 |
Q |
| |
|
||||||||||||| |||||||||||| || ||||||| || ||||| ||||||||||||||||||||||| |||||| | || ||||||| |||||||| |
|
|
| T |
30483865 |
ttaaagacagtgagctttgggatttaccacatgaaaaatctattttacctgctttgaggttgagttacttttatttaacaccaaccctaaagcaatgttt |
30483766 |
T |
|
| Q |
240 |
ctctttttgtgctatatttcccaaagatacagatatcctaaaggaagaattgatttggctttggatggctaatggattgatttcatctaggggtaatacg |
339 |
Q |
| |
|
||| ||||||||||||||||||||||||| ||| ||||| ||||||||||||||| ||||||||||||||||||||| ||| || | | | ||| |
|
|
| T |
30483765 |
ctccttttgtgctatatttcccaaagatagagaaatcctgaaggaagaattgattcagctttggatggctaatggatttattgca---aagaggaattta |
30483669 |
T |
|
| Q |
340 |
gaggttgaagatgttggcatcatggtttgggatgaattgtaccaaaaatcattctttcaagattgcaagatggatgaatattctggaaacagttctttta |
439 |
Q |
| |
|
||||||||||||||||| | |||||||||| | ||||||||| |||||| |||||||||||| ||||||||||||||||||||||| ||| |||||| | |
|
|
| T |
30483668 |
gaggttgaagatgttggaaacatggtttggaaggaattgtacagaaaatcgttctttcaagatagcaagatggatgaatattctggagacatttctttca |
30483569 |
T |
|
| Q |
440 |
aaatgcatgatattgtccatgatctcgctcaatcagtaacggggaaagaatgtgtgtatttggagaatgcaaacatgactaatttgacaaaaaacacaca |
539 |
Q |
| |
|
| ||||||||| ||||||||||||||||||||||||||| |||| |||||||| || |||||||||| ||||| |||||||||| |||||| |||||| |
|
|
| T |
30483568 |
agatgcatgatcttgtccatgatctcgctcaatcagtaatggggcaagaatgtacgtgtttggagaataaaaacacgactaatttgtcaaaaagcacaca |
30483469 |
T |
|
| Q |
540 |
ccacataagttttcactctgaaaatttgttatcattcgatgagggtgccttcaaaaaagttgaatccttacgaacattgtttgacttggagaa |
632 |
Q |
| |
|
|||||| ||||| || | || || ||||| |||||||| ||| |||||||||||||||||||| |||||||||||||||||| |||| |
|
|
| T |
30483468 |
ccacattggttttaacagcaagaaatttttatccttcgatgaaaatgctttcaaaaaagttgaatccttgcgaacattgtttgacttgaagaa |
30483376 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 31 - 624
Target Start/End: Original strand, 30338058 - 30338648
Alignment:
| Q |
31 |
gtggcaataggaaaggagatagtaaagaaatgtaatggattgcctcttgcagcaaaatcattgggaagtttaatgaactcaaggaaagatgaaaaggaat |
130 |
Q |
| |
|
|||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||| ||| || |||||||||| |
|
|
| T |
30338058 |
gtggaaattggaaaggagatagtaaagaaatgtaatggattgcctcttgcagcaaaagcattggggggtttaatggtctcaatgaatgaagaaaaggaat |
30338157 |
T |
|
| Q |
131 |
ggcttaaaattaaagacagtgaactttgggatttatcagatgaaaattccattttgcctgctttgaggttgagttacttatatttaccggcagccctaaa |
230 |
Q |
| |
|
||||| | |||||||||||||| |||||||||||| || ||||||| || ||||| ||||||||||| ||||||||||| |||||| | || ||||||| |
|
|
| T |
30338158 |
ggcttgatattaaagacagtgagctttgggatttaccacatgaaaaatctattttacctgctttgagtttgagttacttttatttaacaccaaccctaaa |
30338257 |
T |
|
| Q |
231 |
acaatgtttctctttttgtgctatatttcccaaagatacagatatcctaaaggaagaattgatttggctttggatggctaatggattgatttcatctagg |
330 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||||| ||| || | | |
|
|
| T |
30338258 |
gcaatgtttctccttttgtgctatatttcccaaagatagagaaatcctgaaggaagaattgattcaactttggatggctaatggatttattgca---aag |
30338354 |
T |
|
| Q |
331 |
ggtaatacggaggttgaagatgttggcatcatggtttgggatgaattgtaccaaaaatcattctttcaagattgcaagatggatgaatattctggaaaca |
430 |
Q |
| |
|
| ||| ||||||||||||||||| | |||||||||| | ||||||||| ||||||| |||||||||||| ||||||||||||||||||||||| ||| |
|
|
| T |
30338355 |
aggaatttagaggttgaagatgttggaaacatggtttggaaggaattgtacaaaaaatcgttctttcaagatagcaagatggatgaatattctggagaca |
30338454 |
T |
|
| Q |
431 |
gttcttttaaaatgcatgatattgtccatgatctcgctcaatcagtaacggggaaagaatgtgtgtatttggagaatgcaaacatgactaatttgacaaa |
530 |
Q |
| |
|
|||||| || ||||||||| ||||||||||||||||||||||||||| |||| |||||||| ||| |||||||||| ||||| |||||||||| |||| |
|
|
| T |
30338455 |
tttctttcaagatgcatgatcttgtccatgatctcgctcaatcagtaatggggcaagaatgtatgtgtttggagaataaaaacacgactaatttgtcaaa |
30338554 |
T |
|
| Q |
531 |
aaacacacaccacataagttttcactctgaaaatttgttatcattcgatgagggtgccttcaaaaaagttgaatccttacgaacattgtttgac |
624 |
Q |
| |
|
|| |||||||||||| ||||| || | || || ||||| |||||||| ||| |||||||||||||||||||| ||||| ||||||||| |
|
|
| T |
30338555 |
aagcacacaccacattggttttgacagcaacaactttttatccttcgatgaaaatgctttcaaaaaagttgaatccttgcgaactttgtttgac |
30338648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 36 - 545
Target Start/End: Complemental strand, 29872742 - 29872233
Alignment:
| Q |
36 |
aataggaaaggagatagtaaagaaatgtaatggattgcctcttgcagcaaaatcattgggaagtttaatgaactcaaggaaagatgaaaaggaatggctt |
135 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| |||| |||| ||||||||| || ||||||||||||||| |
|
|
| T |
29872742 |
aataggaaaggagattgtaaagaaatgtaatggattgcctcttgcagcaaaagcattgggaggtttgatgagctcaaggaatgaagaaaaggaatggctt |
29872643 |
T |
|
| Q |
136 |
aaaattaaagacagtgaactttgggatttatcagatgaaaattccattttgcctgctttgaggttgagttacttatatttaccggcagccctaaaacaat |
235 |
Q |
| |
|
| ||||| |||||||| ||||||| |||||| | |||||||| ||||||| ||||||||||||||||||||| |||||| | || ||||||| |||| |
|
|
| T |
29872642 |
gatattaaggacagtgagctttgggctttatcgcaagaaaattctattttgcttgctttgaggttgagttacttttatttaacaccaaccctaaagcaat |
29872543 |
T |
|
| Q |
236 |
gtttctctttttgtgctatatttcccaaagatacagatatcctaaaggaagaattgatttggctttggatggctaatggattgatttcatctaggggtaa |
335 |
Q |
| |
|
||||||||||||| |||||||||||||| |||| | | ||||| || |||||||||||| |||||||||||||||| ||| |||||||||| |||||| |
|
|
| T |
29872542 |
gtttctctttttgcgctatatttcccaaggatagaaaaatcctgaaagaagaattgattcaactttggatggctaatgaatttatttcatctatgggtaa |
29872443 |
T |
|
| Q |
336 |
tacggaggttgaagatgttggcatcatggtttgggatgaattgtaccaaaaatcattctttcaagattgcaagatggatgaatattctggaaacagttct |
435 |
Q |
| |
|
| ||| |||||||||||||| | |||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||| |
|
|
| T |
29872442 |
tttggacgttgaagatgttggaaacatggtttggaaggaattgtaccaaaaatcattctttcaagatggcaagatggatgaatattctggagacatttct |
29872343 |
T |
|
| Q |
436 |
tttaaaatgcatgatattgtccatgatctcgctcaatcagtaacggggaaagaatgtgtgtatttggagaatgcaaacatgactaatttgacaaaaaaca |
535 |
Q |
| |
|
|| || ||||||||| ||||||||||||||||||||||| ||| |||| |||||||| || |||||||||| ||||||||| | |||| |||||| || |
|
|
| T |
29872342 |
ttcaagatgcatgatcttgtccatgatctcgctcaatcaataatggggcaagaatgtatgcatttggagaacaaaaacatgaccagtttgtcaaaaagca |
29872243 |
T |
|
| Q |
536 |
cacaccacat |
545 |
Q |
| |
|
|||||||||| |
|
|
| T |
29872242 |
cacaccacat |
29872233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 12 - 621
Target Start/End: Complemental strand, 30207114 - 30206505
Alignment:
| Q |
12 |
agaagagcgtgctgatctcgtggcaataggaaaggagatagtaaagaaatgtaatggattgcctcttgcagcaaaatcattgggaagtttaatgaactca |
111 |
Q |
| |
|
|||||||||||| || || |||| |||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||| || |||||| ||| |
|
|
| T |
30207114 |
agaagagcgtgcagagcttgtggaaataggaaaggagatagtaaagaaatgtgatggattgcctcttgcagcacaagcattgggaggtctaatgagttca |
30207015 |
T |
|
| Q |
112 |
aggaaagatgaaaaggaatggcttaaaattaaagacagtgaactttgggatttatcagatgaaaattccattttgcctgctttgaggttgagttacttat |
211 |
Q |
| |
|
||||| || ||||| ||||||||| |||||||||| ||||||||||||| |||| || |||| |||| ||||| ||||||||||||||||| ||||| |
|
|
| T |
30207014 |
aggaatgaagaaaaagaatggcttgaaattaaagagagtgaactttgggctttaccacatgagaattatattttacctgctttgaggttgagctactttc |
30206915 |
T |
|
| Q |
212 |
atttaccggcagccctaaaacaatgtttctctttttgtgctatatttcccaaagatacagatatcctaaaggaagaattgatttggctttggatggctaa |
311 |
Q |
| |
|
||||| | || || |||| | |||||| ||||||||||||| ||||||||||||||||| || | | ||||||||||||| |||||||||||||| |
|
|
| T |
30206914 |
atttaactccaaccttaaagcggtgtttcgctttttgtgctatgtttcccaaagatacagaattcgtgagggaagaattgattcatctttggatggctaa |
30206815 |
T |
|
| Q |
312 |
tggattgatttcatctaggggtaatacggaggttgaagatgttggcatcatggtttgggatgaattgtaccaaaaatcattctttcaagattgcaagatg |
411 |
Q |
| |
|
|| ||| |||| |||||||| |||| |||||||||||||||||||| |||||||||| ||||||||| ||||||||| ||||||||||| ||||||| |
|
|
| T |
30206814 |
tgaatttattttatctagggaaaatatggaggttgaagatgttggcagcatggtttggaatgaattgtgccaaaaatctttctttcaagacatcaagatg |
30206715 |
T |
|
| Q |
412 |
gatgaatattctggaaacagttcttttaaaatgcatgatattgtccatgatctcgctcaatcagtaacggggaaagaatgtgtgtatttggagaatgcaa |
511 |
Q |
| |
|
|| | ||||||| ||| |||||| || ||||||||| ||||||||||||| ||||||||||||| ||| |||||||| |||||||||||||| ||| |
|
|
| T |
30206714 |
gacaacggttctggagacatttctttcaagatgcatgatcttgtccatgatcttgctcaatcagtaatgggtcaagaatgtatgtatttggagaattcaa |
30206615 |
T |
|
| Q |
512 |
acatgactaatttgacaaaaaacacacaccacataagttttcactctgaaaatttgttatcattcgatgagggtgccttcaaaaaagttgaatccttacg |
611 |
Q |
| |
|
||||||||| |||| |||||| ||||||||||||||||||||||| ||| | ||||||||||||| ||||||||||||| |||||||||||||| | |
|
|
| T |
30206614 |
acatgactactttgtcaaaaagcacacaccacataagttttcactatgatgacgtgttatcattcgacgagggtgccttcaggaaagttgaatccttgag |
30206515 |
T |
|
| Q |
612 |
aacattgttt |
621 |
Q |
| |
|
|||||||||| |
|
|
| T |
30206514 |
aacattgttt |
30206505 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 36 - 621
Target Start/End: Original strand, 30241919 - 30242495
Alignment:
| Q |
36 |
aataggaaaggagatagtaaagaaatgtaatggattgcctcttgcagcaaaatcattgggaagtttaatgaactcaaggaaagatgaaaaggaatggctt |
135 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||| ||||||||| ||||||||| || ||| ||||||||||| |
|
|
| T |
30241919 |
aataggaaaggagattgtaaagaaatgtaatggattgcctcttgcagcgaaagcattgggaggtttaatgagctcaaggaatgaagaagaggaatggctt |
30242018 |
T |
|
| Q |
136 |
aaaattaaagacagtgaactttgggatttatcagatgaaaattccattttgcctgctttgaggttgagttacttatatttaccggcagccctaaaacaat |
235 |
Q |
| |
|
|||||||||| || || ||||||| || || | |||| |||||||||||||||||||||||||||| |||||| | || | |||||||||| |
|
|
| T |
30242019 |
gaaattaaagatagcgagctttgggccttgccacaagaaa------ttttgcctgctttgaggttgagttacttttatttaacaccaactctaaaacaat |
30242112 |
T |
|
| Q |
236 |
gtttctctttttgtgctatatttcccaaagatacagatatcctaaaggaagaattgatttggctttggatggctaatggattgatttcatctaggggtaa |
335 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| ||| || |||||||||||||| ||| || || || || |
|
|
| T |
30242113 |
gtttctctttttgtgctatatttcccaaagatggagaaatcctgaaggaagaattgattcagctctgaatggctaatggatttattgcaa--agaggaaa |
30242210 |
T |
|
| Q |
336 |
tacggaggttgaagatgttggcatcatggtttgggatgaattgtaccaaaaatcattctttcaagattgcaagatggatgaatattctggaaacagttct |
435 |
Q |
| |
|
| | |||||||||||||||| | |||||||||| | |||||||||||||||||||| |||||||| |||| |||||||||||||||||| ||| |||| |
|
|
| T |
30242211 |
ttag-aggttgaagatgttggaaacatggtttggaaggaattgtaccaaaaatcattttttcaagacagcaaaatggatgaatattctggagacatttct |
30242309 |
T |
|
| Q |
436 |
tttaaaatgcatgatattgtccatgatctcgctcaatcagtaacggggaaagaatgtgtgtatttggagaatgcaaacatgactaatttgacaaaaaaca |
535 |
Q |
| |
|
|| || ||||||||| ||||||||||||||||||||||||||| |||| ||||||| ||||||||||||| ||||||||| | |||| |||||| || |
|
|
| T |
30242310 |
ttcaagatgcatgatcttgtccatgatctcgctcaatcagtaatggggccagaatgtatgtatttggagaacaaaaacatgaccagtttgtcaaaaagca |
30242409 |
T |
|
| Q |
536 |
cacaccacataagttttcactctgaaaatttgttatcattcgatgagggtgccttcaaaaaagttgaatccttacgaacattgttt |
621 |
Q |
| |
|
|||||||||| ||||| ||| || | |||||||| || ||| || ||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
30242410 |
cacaccacattggttttgactacaaagacttgttatcctttgataagaatgctttcaaaaaagttgaatccttgagaacattgttt |
30242495 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 308 - 621
Target Start/End: Original strand, 30676978 - 30677291
Alignment:
| Q |
308 |
ctaatggattgatttcatctaggggtaatacggaggttgaagatgttggcatcatggtttgggatgaattgtaccaaaaatcattctttcaagattgcaa |
407 |
Q |
| |
|
|||||||||| |||||||||| ||||||| ||| ||||| |||||||| | || ||||||| | |||||||||||||||||||||||||||||| | || |
|
|
| T |
30676978 |
ctaatggatttatttcatctatgggtaatttggacgttgatgatgttggaaacacggtttggaaggaattgtaccaaaaatcattctttcaagatagaaa |
30677077 |
T |
|
| Q |
408 |
gatggatgaatattctggaaacagttcttttaaaatgcatgatattgtccatgatctcgctcaatcagtaacggggaaagaatgtgtgtatttggagaat |
507 |
Q |
| |
|
||||||||||||||||||| ||| ||||||||| ||||||||| ||||||||||||||||||||| ||||| |||| ||||||| ||||||||||||| |
|
|
| T |
30677078 |
gatggatgaatattctggagacatttcttttaagatgcatgatcttgtccatgatctcgctcaattagtaatggggccagaatgtatgtatttggagaaa |
30677177 |
T |
|
| Q |
508 |
gcaaacatgactaatttgacaaaaaacacacaccacataagttttcactctgaaa-atttgttatcattcgatgagggtgccttcaaaaaagttgaatcc |
606 |
Q |
| |
|
||||||||| | |||| |||||| |||||||||||| ||||| || || ||| | |||||||| || ||| || ||| |||||||||||||||||| |
|
|
| T |
30677178 |
aaaaacatgaccagtttgtcaaaaagcacacaccacattggttttgac-ctcaaagacttgttatcctttgataagaatgctttcaaaaaagttgaatcc |
30677276 |
T |
|
| Q |
607 |
ttacgaacattgttt |
621 |
Q |
| |
|
|| ||||||||||| |
|
|
| T |
30677277 |
ttgagaacattgttt |
30677291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 303 - 626
Target Start/End: Original strand, 30330936 - 30331259
Alignment:
| Q |
303 |
gatggctaatggattgatttcatctaggggtaatacggaggttgaagatgttggcatcatggtttgggatgaattgtaccaaaaatcattctttcaagat |
402 |
Q |
| |
|
||||||| ||||||| |||||||||||| ||||| |||||| |||||||| | ||||| |||| ||| ||||| ||||||| |||||||| |||| |
|
|
| T |
30330936 |
gatggctgatggatttatttcatctaggcgtaatttggaggtcctagatgttgctagcatggcttggaatggattgtgccaaaaaccattctttgaagac |
30331035 |
T |
|
| Q |
403 |
tgcaagatggatgaatattctggaaacagttcttttaaaatgcatgatattgtccatgatctcgctcaatcagtaacggggaaagaatgtgtgtatttgg |
502 |
Q |
| |
|
|||||| ||||||||||| | ||| |||||| || | || |||| || || ||||||| ||||||||| || || | || ||| | ||||| ||| |
|
|
| T |
30331036 |
atcaagatctatgaatattctaaagacatttctttaaagacgcgtgatcttttcaatgatcttgctcaatcaatactggagcaacaatatatgtatctgg |
30331135 |
T |
|
| Q |
503 |
agaatgcaaacatgactaatttgacaaaaaacacacaccacataagttttcactctgaaaatttgttatcattcgatgagggtgccttcaaaaaagttga |
602 |
Q |
| |
|
|||||||||||||||||| ||||||||||| ||| || |||||||||||| |||| | |||||||||||| ||||||| |||||||||||||||||||| |
|
|
| T |
30331136 |
agaatgcaaacatgactagtttgacaaaaagcacccatcacataagttttgactccaataatttgttatcaatcgatgacggtgccttcaaaaaagttga |
30331235 |
T |
|
| Q |
603 |
atccttacgaacattgtttgactt |
626 |
Q |
| |
|
|||||| |||||||||| |||||| |
|
|
| T |
30331236 |
atccttgcgaacattgtatgactt |
30331259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 122 - 510
Target Start/End: Complemental strand, 17983389 - 17983001
Alignment:
| Q |
122 |
aaaaggaatggcttaaaattaaagacagtgaactttgggatttatcagatgaaaattccattttgcctgctttgaggttgagttacttatatttaccggc |
221 |
Q |
| |
|
||||||||||| || |||||||||| || || || |||| |||| | |||| ||||| ||||| || ||| | |||||||| ||||| ||||| | | |
|
|
| T |
17983389 |
aaaaggaatggtttgaaattaaagagagcgagctctgggctttaccgcatgagaattctattttcccagctctaaggttgagctactttcatttatcacc |
17983290 |
T |
|
| Q |
222 |
agccctaaaacaatgtttctctttttgtgctatatttcccaaagatacagatatcctaaaggaagaattgatttggctttggatggctaatggattgatt |
321 |
Q |
| |
|
| || |||||||||||||| ||||||||||||||||||||||||| |||| ||| | || |||||| | ||| ||||||||||||||| ||| || |
|
|
| T |
17983289 |
aaccttaaaacaatgtttcgctttttgtgctatatttcccaaagaagcagaaatcatgaaagaagaactaattcatctttggatggctaataaatttatc |
17983190 |
T |
|
| Q |
322 |
tcatctaggggtaatacggaggttgaagatgttggcatcatggtttgggatgaattgtaccaaaaatcattctttcaagattgcaagatggatgaatatt |
421 |
Q |
| |
|
|||||||| ||| |||||||||||||||||||| |||| ||||| ||||||||||||||||||| ||||||||||| | | || ||||| |||| |
|
|
| T |
17983189 |
tcatctagaaaaaatttggaggttgaagatgttggcaacatgatttggaatgaattgtaccaaaaatctttctttcaagacatccatattgatgattatt |
17983090 |
T |
|
| Q |
422 |
ctggaaacagttcttttaaaatgcatgatattgtccatgatctcgctcaatcagtaacggggaaagaatgtgtgtatttggagaatgca |
510 |
Q |
| |
|
| | | |||||| |||||||| ||| | ||||||||||| |||||||||||| ||||| | ||||||||| ||| ||||||||| |
|
|
| T |
17983089 |
caagtgtgatttctttcaaaatgcacgatctcgtccatgatcttgctcaatcagtagcggggcatgaatgtgtggttttagagaatgca |
17983001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 31 - 189
Target Start/End: Original strand, 30676821 - 30676979
Alignment:
| Q |
31 |
gtggcaataggaaaggagatagtaaagaaatgtaatggattgcctcttgcagcaaaatcattgggaagtttaatgaactcaaggaaagatgaaaaggaat |
130 |
Q |
| |
|
|||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||| ||||||||| || || ||||||| |
|
|
| T |
30676821 |
gtggaaattggaaaggagatagtaaagaaatgtaatggattgcctcttgcagcaaaagcattggggggtttgatgagctcaaggaatgaagagaaggaat |
30676920 |
T |
|
| Q |
131 |
ggcttaaaattaaagacagtgaactttgggatttatcagatgaaaattccattttgcct |
189 |
Q |
| |
|
||||| | |||||||||||||| ||||||| |||| || | ||||||| ||||||||| |
|
|
| T |
30676921 |
ggcttgatattaaagacagtgagctttgggctttaccacaaaaaaattctattttgcct |
30676979 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 34 - 476
Target Start/End: Complemental strand, 30475945 - 30475503
Alignment:
| Q |
34 |
gcaataggaaaggagatagtaaagaaatgtaatggattgcctcttgcagcaaaatcattgggaagtttaatgaactcaaggaaagatgaaaaggaatggc |
133 |
Q |
| |
|
|||||||| |||| |||||||||||| ||| |||||||||||||||||| || |||||||| || ||||| |||||||| |||||||| ||||||| |
|
|
| T |
30475945 |
gcaataggtaaggcgatagtaaagaagtgtggaggattgcctcttgcagcacaagcattgggaggtctaatgcgctcaaggagtgatgaaaatgaatggc |
30475846 |
T |
|
| Q |
134 |
ttaaaattaaagacagtgaactttgggatttatcagatgaaaattccattttgcctgctttgaggttgagttacttatatttaccggcagccctaaaaca |
233 |
Q |
| |
|
|| |||||||||||||| | || ||| ||| || |||| |||||||||||||| || |||||||| || ||||| ||||| | | || |||| | |
|
|
| T |
30475845 |
ttgaaattaaagacagtaatctctggaccttaccatatgagaattccattttgccagccttgaggttaagctactttcatttaacaccgaccttaaagcg |
30475746 |
T |
|
| Q |
234 |
atgtttctctttttgtgctatatttcccaaagatacagatatcctaaaggaagaattgatttggctttggatggctaatggattgatttcatctaggggt |
333 |
Q |
| |
|
||||| |||||||||| |||||||||||||||| || || |||||||||| |||||| || ||||||| |||||||| |||| || | || | |
|
|
| T |
30475745 |
gtgttttgctttttgtgcgatatttcccaaagatatggaaattgtaaaggaagatttgattcatctatggatgggcaatggatttattttctcaaaggct |
30475646 |
T |
|
| Q |
334 |
aatacggaggttgaagatgttggcatcatggtttgggatgaattgtaccaaaaatcattctttcaagattgcaagatggatgaatattctggaaacagtt |
433 |
Q |
| |
|
||| ||| || ||| | |||||| ||| ||||| | ||| ||| ||||||||||||||| ||||| |||||| ||||| ||||| ||| ||| | |
|
|
| T |
30475645 |
aatttggatgtagaattttttggcaatatgatttggaaggaactgtgccaaaaatcattcttccaagacatcaagatagatgattattcaggagacatta |
30475546 |
T |
|
| Q |
434 |
cttttaaaatgcatgatattgtccatgatctcgctcaatcagt |
476 |
Q |
| |
|
|||| || |||||||| | || |||||||| ||||||||||| |
|
|
| T |
30475545 |
ctttcaagatgcatgacctagtgcatgatcttgctcaatcagt |
30475503 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 484 - 621
Target Start/End: Original strand, 17418149 - 17418286
Alignment:
| Q |
484 |
aaagaatgtgtgtatttggagaatgcaaacatgactaatttgacaaaaaacacacaccacataagttttcactctgaaaatttgttatcattcgatgagg |
583 |
Q |
| |
|
||||||||| ||||||| |||||||||||||||| || |||| |||||| ||||||||||||| ||||||||||||| | | | ||||| || |||||| |
|
|
| T |
17418149 |
aaagaatgtatgtatttagagaatgcaaacatgattattttgtcaaaaagcacacaccacatatgttttcactctgatgactcgctatcactcaatgagg |
17418248 |
T |
|
| Q |
584 |
gtgccttcaaaaaagttgaatccttacgaacattgttt |
621 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||| |
|
|
| T |
17418249 |
atgccttcaaaaaagttgaatccttgcgaacattgttt |
17418286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 35 - 474
Target Start/End: Original strand, 30521162 - 30521601
Alignment:
| Q |
35 |
caataggaaaggagatagtaaagaaatgtaatggattgcctcttgcagcaaaatcattgggaagtttaatgaactcaaggaaagatgaaaaggaatggct |
134 |
Q |
| |
|
|||||||||| |||||||||||||| ||| |||||||||||||||||| || |||||||| | ||||| |||||||| | ||||| |||||||| |
|
|
| T |
30521162 |
caataggaaaagagatagtaaagaagtgtgggggattgcctcttgcagcacaagcattgggaggcctaatgtgctcaaggagtggagaaaaagaatggct |
30521261 |
T |
|
| Q |
135 |
taaaattaaagacagtgaactttgggatttatcagatgaaaattccattttgcctgctttgaggttgagttacttatatttaccggcagccctaaaacaa |
234 |
Q |
| |
|
| |||||||||| || ||||| |||| | |||| ||||| |||||||||||||| |||||||| ||||| ||||| || || |||||||| |
|
|
| T |
30521262 |
tgaaattaaagatagcaggatttggtctttaccgaatgagaattctattttgcctgctttaaggttgagctactttcatttaaacccaaccttaaaacaa |
30521361 |
T |
|
| Q |
235 |
tgtttctctttttgtgctatatttcccaaagatacagatatcctaaaggaagaattgatttggctttggatggctaatggattgatttcatctaggggta |
334 |
Q |
| |
|
|||||| |||||||||| || ||||||||||||| ||| ||| | |||| ||| || ||| || ||||| || || ||||| || ||||| |||| | |
|
|
| T |
30521362 |
tgtttcactttttgtgccatgtttcccaaagatatagaaatcatgaagggagatttaattcatctctggatcgccaacggatttatatcatcaagggaaa |
30521461 |
T |
|
| Q |
335 |
atacggaggttgaagatgttggcatcatggtttgggatgaattgtaccaaaaatcattctttcaagattgcaagatggatgaatattctggaaacagttc |
434 |
Q |
| |
|
|| ||||| ||||||||||| | ||| ||||| ||||||||| |||||| ||||| || ||||| |||||||| || |||| ||| || ||| |
|
|
| T |
30521462 |
atttagaggtagaagatgttggaaatatgatttggaatgaattgtgccaaaagtcatttttccaagaaatcaagatggtcgatgattcaggaggcatttc |
30521561 |
T |
|
| Q |
435 |
ttttaaaatgcatgatattgtccatgatctcgctcaatca |
474 |
Q |
| |
|
||| || |||||||| ||||||||||||| ||||||||| |
|
|
| T |
30521562 |
tttcaagttgcatgatcttgtccatgatcttgctcaatca |
30521601 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 35 - 474
Target Start/End: Original strand, 30561502 - 30561941
Alignment:
| Q |
35 |
caataggaaaggagatagtaaagaaatgtaatggattgcctcttgcagcaaaatcattgggaagtttaatgaactcaaggaaagatgaaaaggaatggct |
134 |
Q |
| |
|
|||||||||| |||||||||||||| ||| |||||||||||||||||| || |||||||| | ||||| |||||||| | ||||| |||||||| |
|
|
| T |
30561502 |
caataggaaaagagatagtaaagaagtgtgggggattgcctcttgcagcacaagcattgggaggcctaatgtgctcaaggagtggagaaaaagaatggct |
30561601 |
T |
|
| Q |
135 |
taaaattaaagacagtgaactttgggatttatcagatgaaaattccattttgcctgctttgaggttgagttacttatatttaccggcagccctaaaacaa |
234 |
Q |
| |
|
| |||||||||| || ||||| |||| | |||| ||||| |||||||||||||| |||||||| ||||| ||||| || || |||||||| |
|
|
| T |
30561602 |
tgaaattaaagatagcaggatttggtctttaccgaatgagaattctattttgcctgctttaaggttgagctactttcatttaaacccaaccttaaaacaa |
30561701 |
T |
|
| Q |
235 |
tgtttctctttttgtgctatatttcccaaagatacagatatcctaaaggaagaattgatttggctttggatggctaatggattgatttcatctaggggta |
334 |
Q |
| |
|
|||||| |||||||||| || ||||||||||||| ||| ||| | |||| ||| || ||| || ||||| || || ||||| || ||||| |||| | |
|
|
| T |
30561702 |
tgtttcactttttgtgccatgtttcccaaagatatagaaatcatgaagggagatttaattcatctctggatcgccaacggatttatatcatcaagggaaa |
30561801 |
T |
|
| Q |
335 |
atacggaggttgaagatgttggcatcatggtttgggatgaattgtaccaaaaatcattctttcaagattgcaagatggatgaatattctggaaacagttc |
434 |
Q |
| |
|
|| ||||| ||||||||||| | ||| ||||| ||||||||| |||||| ||||| || ||||| |||||||| || |||| ||| || ||| |
|
|
| T |
30561802 |
atttagaggtagaagatgttggaaatatgatttggaatgaattgtgccaaaagtcatttttccaagaaatcaagatggtcgatgattcaggaggcatttc |
30561901 |
T |
|
| Q |
435 |
ttttaaaatgcatgatattgtccatgatctcgctcaatca |
474 |
Q |
| |
|
||| || |||||||| ||||||||||||| ||||||||| |
|
|
| T |
30561902 |
tttcaagttgcatgatcttgtccatgatcttgctcaatca |
30561941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 650 - 711
Target Start/End: Original strand, 30338680 - 30338741
Alignment:
| Q |
650 |
atgatcccttcccattaaacagctctcttcgagttttaagcacatcctctctacaggtccca |
711 |
Q |
| |
|
|||||| ||||||||||| ||||||||| || |||||||||||||| ||||| ||| ||||| |
|
|
| T |
30338680 |
atgatcacttcccattaagcagctctctccgtgttttaagcacatcttctctgcagatccca |
30338741 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 324; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 2 - 696
Target Start/End: Complemental strand, 26707934 - 26707243
Alignment:
| Q |
2 |
gacattacaaagaagagcgtgctgatctcgtggcaataggaaaggagatagtaaagaaatgtaatggattgcctcttgcagcaaaatcattgggaagttt |
101 |
Q |
| |
|
||||||||| |||||||| | | | || |||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||| |||| |
|
|
| T |
26707934 |
gacattacagagaagagcatacaaagcttgtggaaataggaaaggagatagtaaaaaaatgtaatggattacctcttgcagcaaaagcattgggaggttt |
26707835 |
T |
|
| Q |
102 |
aatgaactcaaggaaagatgaaaaggaatggcttaaaattaaagacagtgaactttgggatttatcagatgaaaattccattttgcctgctttgaggttg |
201 |
Q |
| |
|
|||| ||||| ||| || ||||||||||||||| | |||||||||||||| |||||||||||| || | ||||| || ||||||||||||||||||||| |
|
|
| T |
26707834 |
aatgttctcaatgaatgaagaaaaggaatggcttgatattaaagacagtgagctttgggatttaccacaagaaaaatctattttgcctgctttgaggttg |
26707735 |
T |
|
| Q |
202 |
agttacttatatttaccggcagccctaaaacaatgtttctctttttgtgctatatttcccaaagatacagatatcctaaaggaagaattgatttggcttt |
301 |
Q |
| |
|
|||||||| |||||| | || ||||||| ||||||||||||||||||||||||||||||||||||| ||| ||| | ||||||||||||||| |||| |
|
|
| T |
26707734 |
agttacttttatttaacaccaaccctaaagcaatgtttctctttttgtgctatatttcccaaagatagagaaatcttgaaggaagaattgattcaacttt |
26707635 |
T |
|
| Q |
302 |
ggatggctaatggattgatttcatctaggggtaatacggaggttgaagatgttggcatcatggtttgggatgaattgtaccaaaaatcattctttcaaga |
401 |
Q |
| |
|
|||||||||||||||| ||| || ||| ||| ||||||||||||||||| | |||||||||| | ||||||||||||||||||||||||||||| |
|
|
| T |
26707634 |
ggatggctaatggatttattgcaaagagg---aatttagaggttgaagatgttggaaacatggtttggaaggaattgtaccaaaaatcattctttcaaga |
26707538 |
T |
|
| Q |
402 |
ttgcaagatggatgaatattctggaaacagttcttttaaaatgcatgatattgtccatgatctcgctcaatcagtaacggggaaagaatgtgtgtatttg |
501 |
Q |
| |
|
|| ||||||| ||||||||||||| ||| |||||| || ||||||||| || |||||||||||||||||||||||| ||| ||||||| |||||||| |
|
|
| T |
26707537 |
ctgtaagatgggtgaatattctggagacatttctttcaagatgcatgatcttatccatgatctcgctcaatcagtaatgggacaagaatgcatgtatttg |
26707438 |
T |
|
| Q |
502 |
gagaatgcaaacatgactaatttgacaaaaaacacacaccacataagttttcactctgaaaatttgttatcattcgatgagggtgccttcaaaaaagttg |
601 |
Q |
| |
|
|||||||||||||||| || ||||||||||| ||||||||||||||||||| |||| || | ||| |||||||||||||||||| |||||||||||||| |
|
|
| T |
26707437 |
gagaatgcaaacatgagtagtttgacaaaaagcacacaccacataagttttaactccgatacttttttatcattcgatgagggtatcttcaaaaaagttg |
26707338 |
T |
|
| Q |
602 |
aatccttacgaacattgtttgacttggagaattatattgcnnnnnnncatgatcccttcccattaaacagctctcttcgagttttaagcacatcc |
696 |
Q |
| |
|
||||||| |||||||||||||||||| |||||||| | ||||||| ||||||||||||| |||||||||| |||||| |||||||| |
|
|
| T |
26707337 |
aatccttgcgaacattgtttgacttgaagaattattccccaaaaaaccatgatcacttcccattaaaccgctctcttcgggttttatgcacatcc |
26707243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 228; Significance: 1e-125; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 2 - 621
Target Start/End: Original strand, 20296086 - 20296705
Alignment:
| Q |
2 |
gacattacaaagaagagcgtgctgatctcgtggcaataggaaaggagatagtaaagaaatgtaatggattgcctcttgcagcaaaatcattgggaagttt |
101 |
Q |
| |
|
||||||||| |||||||| | | | || |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| |
|
|
| T |
20296086 |
gacattacagagaagagcatacaaagcttgtggaaataggaaaggagatagtaaagaaatgtaatggattgcctcttgcagcaaaagcattgggaggttt |
20296185 |
T |
|
| Q |
102 |
aatgaactcaaggaaagatgaaaaggaatggcttaaaattaaagacagtgaactttgggatttatcagatgaaaattccattttgcctgctttgaggttg |
201 |
Q |
| |
|
|||| ||||| ||| || ||||||||||||| | | |||||||||| ||| ||||||| |||| || | ||||| || |||||||||||||||||| || |
|
|
| T |
20296186 |
aatggtctcaatgaatgaagaaaaggaatggcgtgatattaaagacaatgacctttgggctttaccacaagaaaaatctattttgcctgctttgaggctg |
20296285 |
T |
|
| Q |
202 |
agttacttatatttaccggcagccctaaaacaatgtttctctttttgtgctatatttcccaaagatacagatatcctaaaggaagaattgatttggcttt |
301 |
Q |
| |
|
|||||||| |||||| | || | ||||| ||||||||||||||||||||||||||||| || |||| ||| ||| | || |||||||||||| ||||| |
|
|
| T |
20296286 |
agttacttttatttaacaccaactctaaagcaatgtttctctttttgtgctatatttcctaaggatagagaaatcttgaaagaagaattgattcagcttt |
20296385 |
T |
|
| Q |
302 |
ggatggctaatggattgatttcatctaggggtaatacggaggttgaagatgttggcatcatggtttgggatgaattgtaccaaaaatcattctttcaaga |
401 |
Q |
| |
|
|||||||||||||||| |||||||||| ||||||| ||| |||||||||||||| | |||||||||| | ||||||||||||||||||||||||||||| |
|
|
| T |
20296386 |
ggatggctaatggattaatttcatctatgggtaatttggacgttgaagatgttggaaacatggtttggaaggaattgtaccaaaaatcattctttcaaga |
20296485 |
T |
|
| Q |
402 |
ttgcaagatggatgaatattctggaaacagttcttttaaaatgcatgatattgtccatgatctcgctcaatcagtaacggggaaagaatgtgtgtatttg |
501 |
Q |
| |
|
||| || |||||||||||| || | | || ||| || ||||||||| |||| |||||||| ||| |||||| ||||||||||||| |||||||| |
|
|
| T |
20296486 |
aatcaaaatagatgaatattctagagatatttatttcaagatgcatgatcttgtttatgatctccttcattcagtagtggggaaagaatgtatgtatttg |
20296585 |
T |
|
| Q |
502 |
gagaatgcaaacatgactaatttgacaaaaaacacacaccacataagttttcactctgaaaatttgttatcattcgatgagggtgccttcaaaaaagttg |
601 |
Q |
| |
|
||| || |||| | ||||||||| || || |||||||||||| ||||| ||| | | |||||||| || | |||||||||||||| |||||| |
|
|
| T |
20296586 |
gaggataaaaacgttactaatttgtcacgaagcacacaccacattggttttgactacacagacttgttatccatcaacaagggtgccttcaaagaagttg |
20296685 |
T |
|
| Q |
602 |
aatccttacgaacattgttt |
621 |
Q |
| |
|
||||||| |||||||||||| |
|
|
| T |
20296686 |
aatccttgcgaacattgttt |
20296705 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 31 - 474
Target Start/End: Complemental strand, 52352532 - 52352088
Alignment:
| Q |
31 |
gtggcaataggaaaggagatagtaaagaaatgtaatggattgcctcttgcagcaaaatcattgggaagtttaatgaactcaaggaaagatgaaaaggaat |
130 |
Q |
| |
|
||||||||||| || | |||||||||||| ||| |||||||||||||| ||| || |||| ||| || ||||| |||||| || | |||||||||| |
|
|
| T |
52352532 |
gtggcaataggcaaagcgatagtaaagaagtgtgggggattgcctcttgctgcacaagcattaggaggtctaatgcgctcaagaaatggagaaaaggaat |
52352433 |
T |
|
| Q |
131 |
ggcttaaaattaaagacagtgaactttgggatttatcagatgaaaattccattttgcctgctttgaggttgagttacttatatttaccggcagccctaaa |
230 |
Q |
| |
|
|| || |||||||||| || | |||||| |||||||||||| ||||| ||||||||||| |||||||||||||| || ||||| || || || |||| |
|
|
| T |
52352432 |
gggttgaaattaaagagagcaagctttggtctttatcagatgagaattctattttgcctgccttgaggttgagttatttccatttaacgtcaaccttaaa |
52352333 |
T |
|
| Q |
231 |
acaatgtttctctttttgtgctatatttcccaaagatacagatatcctaaaggaagaattgatttggctttggatggctaatggattgatttcatctagg |
330 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||| || |||||||| || || |||||| || |||||||| |||||||| ||||| |||| | |
|
|
| T |
52352332 |
acaatgtttctctttctgtgccatatttcccaaagatacggaaatcctaaaagacgatttgattcatctctggatggccaatggatttatttcgtctaag |
52352233 |
T |
|
| Q |
331 |
ggtaatacggaggttg-aagatgttggcatcatggtttgggatgaattgtaccaaaaatcattctttcaagattgcaagatggatgaatattctggaaac |
429 |
Q |
| |
|
| ||| |||||| | |||| ||||||| ||| ||||| |||||||||||||||| |||||||||||||| |||||| |||| |||| ||| || |
|
|
| T |
52352232 |
gaaaatttggaggtagaaagaagttggcaatatgatttggaatgaattgtaccaaaagtcattctttcaagacatcaagatcaatgattatttaggagac |
52352133 |
T |
|
| Q |
430 |
agttcttttaaaatgcatgatattgtccatgatctcgctcaatca |
474 |
Q |
| |
|
| |||||| || ||||||||| |||| |||||||| ||||||||| |
|
|
| T |
52352132 |
atttctttcaagatgcatgatcttgtacatgatcttgctcaatca |
52352088 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 32 - 401
Target Start/End: Complemental strand, 13617168 - 13616800
Alignment:
| Q |
32 |
tggcaataggaaaggagatagtaaagaaatgtaatggattgcctcttgcagcaaaatcattgggaagtttaatgaactcaaggaaagatgaaaaggaatg |
131 |
Q |
| |
|
|||||||||||||||||||||| || || ||| |||||||||||||||| | || ||||||| | |||| |||| |||| | ||||||||||| |
|
|
| T |
13617168 |
tggcaataggaaaggagatagttaaaaagtgtggaggattgcctcttgcaggacaagcattggggtctctaatacactcgaggagtggagaaaaggaatg |
13617069 |
T |
|
| Q |
132 |
gcttaaaattaaagacagtgaactttgggatttatcagatgaaaattccattttgcctgctttgaggttgagttacttatatttaccggcagccctaaaa |
231 |
Q |
| |
|
| | |||||| ||| || || |||||||||||| |||| ||||| ||||| |||| ||||||| |||||||||| ||||| || || || | ||| |
|
|
| T |
13617068 |
gtgtgaaattagagagagcgagctttgggatttacggtatgagaattctatttttcctgatttgaggctgagttacttc-atttatcgccaacctttaaa |
13616970 |
T |
|
| Q |
232 |
caatgtttctctttttgtgctatatttcccaaagatacagatatcctaaaggaagaattgatttggctttggatggctaatggattgatttcatctaggg |
331 |
Q |
| |
|
||||| ||| |||| |||| | ||||||| ||||||||| | ||| |||||||||||||||| |||||||||||||||| ||| ||||||| || |
|
|
| T |
13616969 |
caatgattcgctttctgtgttgtatttcctaaagatacaaaaatcacaaaggaagaattgattcatctttggatggctaatgaatttatttcatgtaaaa |
13616870 |
T |
|
| Q |
332 |
gtaatacggaggttgaagatgttggcatcatggtttgggatgaattgtaccaaaaatcattctttcaaga |
401 |
Q |
| |
|
|| |||||||||||||||||| | |||| ||||| ||||||||||||||||||| || |||||||| |
|
|
| T |
13616869 |
aaaaattggaggttgaagatgttggaaacatgatttggaatgaattgtaccaaaaatctttttttcaaga |
13616800 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 143; Significance: 1e-74; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 1 - 539
Target Start/End: Complemental strand, 7100024 - 7099486
Alignment:
| Q |
1 |
ggacattacaaagaagagcgtgctgatctcgtggcaataggaaaggagatagtaaagaaatgtaatggattgcctcttgcagcaaaatcattgggaagtt |
100 |
Q |
| |
|
|||||||||| ||||||||||||||| || ||| |||||| |||||||||||||| || ||| |||||||||||||||||| || |||| || || |
|
|
| T |
7100024 |
ggacattacagagaagagcgtgctgagcttgtgaaaataggcaaggagatagtaaaaaagtgtggaggattgcctcttgcagcacaagcattagggtgtc |
7099925 |
T |
|
| Q |
101 |
taatgaactcaaggaaagatgaaaaggaatggcttaaaattaaagacagtgaactttgggatttatcagatgaaaattccattttgcctgctttgaggtt |
200 |
Q |
| |
|
||||| | ||||| | || ||||| | |||| | |||||||||| ||||| | |||| |||| | | || ||||| |||||||| ||||||||||| |
|
|
| T |
7099924 |
taatgcattcaagaagtgaagaaaaagcatggttagaaattaaagagagtgagatctgggctttaccgcacgagaattctattttgccagctttgaggtt |
7099825 |
T |
|
| Q |
201 |
gagttacttatatttaccggcagccctaaaacaatgtttctctttttgtgctatatttcccaaagatacagatatcctaaaggaagaattgatttggctt |
300 |
Q |
| |
|
||| ||||| ||||| | || || |||||||||||||| |||||||||||||||||| |||||||||| | ||| | ||||||||||||||| ||| |
|
|
| T |
7099824 |
gagctacttccatttatcaccaaccttaaaacaatgtttcgctttttgtgctatatttcgcaaagatacaaaaatcatgaaggaagaattgattcatctt |
7099725 |
T |
|
| Q |
301 |
tggatggctaatggattgatttcatctaggggtaatacggaggttgaagatgttggcatcatggtttgggatgaattgtaccaaaaatcattctttcaag |
400 |
Q |
| |
|
||||||||||||||||| ||||||||||| ||| |||||||||||||||||| | |||| ||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
7099724 |
tggatggctaatggatttatttcatctagaaaaaatttggaggttgaagatgttggaaacatgatttggaatgaattgtaccaaaaatctttctttcaag |
7099625 |
T |
|
| Q |
401 |
attgcaagatggatgaatattctggaaacagttcttttaaaatgcatgatattgtccatgatctcgctcaatcagtaacggggaaagaatgtgtgtattt |
500 |
Q |
| |
|
| | | |||||||| ||||| || | |||||| |||||||||||| | ||||||||||| |||||||||||| |||| |||||||| || ||| |
|
|
| T |
7099624 |
acatccatatggatgattattcaagagtgatttctttcaaaatgcatgatctcgtccatgatcttgctcaatcagtaggggggcaagaatgtatggtttt |
7099525 |
T |
|
| Q |
501 |
ggagaatgcaaacatgactaatttgacaaaaaacacaca |
539 |
Q |
| |
|
|| |||||| | ||||||| ||| |||||| |||||| |
|
|
| T |
7099524 |
agataatgcatatgtgactaacttgtcaaaaagcacaca |
7099486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 12 - 477
Target Start/End: Original strand, 7581233 - 7581698
Alignment:
| Q |
12 |
agaagagcgtgctgatctcgtggcaataggaaaggagatagtaaagaaatgtaatggattgcctcttgcagcaaaatcattgggaagtttaatgaactca |
111 |
Q |
| |
|
||||||| |||| || || ||||||||||| |||||||||||||| |||||| |||||||||||||||||| || ||||||| || ||||| ||||| |
|
|
| T |
7581233 |
agaagagagtgcagagcttgtggcaataggcaaggagatagtaaaaaaatgtgcgggattgcctcttgcagcacaagcattggggtgtctaatgcactca |
7581332 |
T |
|
| Q |
112 |
aggaaagatgaaaaggaatggcttaaaattaaagacagtgaactttgggatttatcagatgaaaattccattttgcctgctttgaggttgagttacttat |
211 |
Q |
| |
|
|||| || |||||||||||| || |||||||||| || || |||||||||||| | |||| ||||| | |||||| ||| |||| ||||| ||||| |
|
|
| T |
7581333 |
aggagtgaagaaaaggaatggtttgaaattaaagagagcgagctttgggatttaccgcatgagaattctactttgccagctctgagattgagctactttc |
7581432 |
T |
|
| Q |
212 |
atttaccggcagccctaaaacaatgtttctctttttgtgctatatttcccaaagatacagatatcctaaaggaagaattgatttggctttggatggctaa |
311 |
Q |
| |
|
||||| | || || |||||||||||||| ||||||||||||||||||| ||||||||| | ||| | ||||||||||||||| |||||||||||||| |
|
|
| T |
7581433 |
atttatcaccaaccttaaaacaatgtttcgctttttgtgctatatttcctaaagatacaaaaatcatgaaggaagaattgattcatctttggatggctaa |
7581532 |
T |
|
| Q |
312 |
tggattgatttcatctaggggtaatacggaggttgaagatgttggcatcatggtttgggatgaattgtaccaaaaatcattctttcaagattgcaagatg |
411 |
Q |
| |
|
|| ||| ||||||||||| ||| |||||||||||||||||||| |||| ||||| ||||||||| |||||| || ||||||||||| | ||| |
|
|
| T |
7581533 |
tgaatttatttcatctagaaaaaatttggaggttgaagatgttggcaacatgatttggaatgaattgtgccaaaagtctttctttcaagacattcatatg |
7581632 |
T |
|
| Q |
412 |
gatgaatattctggaaacagttcttttaaaatgcatgatattgtccatgatctcgctcaatcagta |
477 |
Q |
| |
|
||||| |||| || ||| |||||| |||||||||||| | |||||||||| |||| ||||||| |
|
|
| T |
7581633 |
gatgatgattcaagagacatttctttcaaaatgcatgatctcatccatgatcttgctcgatcagta |
7581698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 85; Significance: 4e-40; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 242 - 402
Target Start/End: Original strand, 25293668 - 25293828
Alignment:
| Q |
242 |
ctttttgtgctatatttcccaaagatacagatatcctaaaggaagaattgatttggctttggatggctaatggattgatttcatctaggggtaatacgga |
341 |
Q |
| |
|
||||||||||||| ||||| ||||||||| | ||| ||||||||||||| | |||||||||||||||||||| ||||||||||||| ||| ||| |
|
|
| T |
25293668 |
ctttttgtgctatgtttccaaaagatacaaaaatcgataaggaagaattgactcatctttggatggctaatggatttatttcatctagggaaaatttgga |
25293767 |
T |
|
| Q |
342 |
ggttgaagatgttggcatcatggtttgggatgaattgtaccaaaaatcattctttcaagat |
402 |
Q |
| |
|
||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||| |
|
|
| T |
25293768 |
ggttgaagatgttggcagcatggtttggaatgaattgtgccaaaaatcattctttcaagat |
25293828 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 576 - 615
Target Start/End: Original strand, 25293947 - 25293986
Alignment:
| Q |
576 |
cgatgagggtgccttcaaaaaagttgaatccttacgaaca |
615 |
Q |
| |
|
|||||||||| |||||| |||||||||||||||||||||| |
|
|
| T |
25293947 |
cgatgagggttccttcataaaagttgaatccttacgaaca |
25293986 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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