View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19388_low_7 (Length: 358)

Name: NF19388_low_7
Description: NF19388
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19388_low_7
NF19388_low_7
[»] chr7 (4 HSPs)
chr7 (3-338)||(9015589-9015924)
chr7 (9-338)||(13276142-13276472)
chr7 (1-66)||(16033541-16033606)
chr7 (246-338)||(16033762-16033854)
[»] chr6 (5 HSPs)
chr6 (71-304)||(16164174-16164409)
chr6 (11-240)||(19724347-19724577)
chr6 (1-327)||(17806931-17807258)
chr6 (3-49)||(16164127-16164173)
chr6 (273-327)||(19724279-19724333)
[»] chr3 (4 HSPs)
chr3 (9-264)||(268640-268896)
chr3 (132-337)||(8990569-8990774)
chr3 (220-327)||(14139385-14139492)
chr3 (220-327)||(14140197-14140304)
[»] chr4 (2 HSPs)
chr4 (173-310)||(12813800-12813937)
chr4 (170-264)||(14770972-14771066)
[»] scaffold0093 (1 HSPs)
scaffold0093 (222-327)||(49371-49476)
[»] chr5 (1 HSPs)
chr5 (222-318)||(26866293-26866389)
[»] scaffold0293 (1 HSPs)
scaffold0293 (197-251)||(5324-5378)
[»] scaffold0401 (1 HSPs)
scaffold0401 (227-327)||(5400-5500)
[»] chr2 (2 HSPs)
chr2 (30-66)||(23812263-23812299)
chr2 (1-327)||(25114378-25114705)
[»] scaffold0013 (1 HSPs)
scaffold0013 (170-265)||(150605-150700)
[»] scaffold0001 (1 HSPs)
scaffold0001 (27-106)||(92916-92995)
[»] scaffold0053 (1 HSPs)
scaffold0053 (153-306)||(40652-40806)
[»] scaffold0005 (1 HSPs)
scaffold0005 (170-264)||(68664-68758)


Alignment Details
Target: chr7 (Bit Score: 312; Significance: 1e-176; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 312; E-Value: 1e-176
Query Start/End: Original strand, 3 - 338
Target Start/End: Complemental strand, 9015924 - 9015589
Alignment:
Q  3 taaatatgcataaatttatcaacaaaatcatgaaacattgaattcattactctttggtatgtagaaccagcattctttaagccgaaaggaattactaccc 102  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  9015924 taaatctgcataaatttatcaacaaaatcatgaaacattgaattcattactctttggtatgtagaatcaacattctttaagccgaaaggaattactaccc 9015825  T
Q  103 attcgtacgtgcctaaatctcctggacaccaaaatgttgttttagacacatcttcatcagcgatgaaatttgattgtaactagaatagctatcgagcata 202  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9015824 attcgtacgtgcctaaatctcctggacaccgaaatgttgttttagacacatgttcatcagcgatgaaatttgattgtaactagaatagctatcgagcata 9015725  T
Q  203 ctcaagtattcaaatcatgctgcagaatcaactagcatttctaccactggcataggatattcatcctttggtgtagcattgttcaggtctctaaagtcta 302  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9015724 ctcaagtattcaaatcatgctgcagaatcaactagcatttctaccactggcataggatattcatcctttggtgtagcattgttcaggtctctaaagtcta 9015625  T
Q  303 tacaaactctaagaattccatttttaataattacag 338  Q
    |||||||||||||||||||||||||| |||||||||    
T  9015624 tacaaactctaagaattccatttttattaattacag 9015589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 9 - 338
Target Start/End: Original strand, 13276142 - 13276472
Alignment:
Q  9 tgcataaatttatcaacaaaatcatgaaacattgaattcattactctttggtatgtagaaccagcattctttaagccgaaaggaattactacccattcgt 108  Q
    |||||||||||  |||  ||||||| |||||||||||||||| || |||||||||||| |||| |||||| || ||| ||||| |||| ||||||||| |    
T  13276142 tgcataaatttgccaatgaaatcattaaacattgaattcattgctatttggtatgtagcaccaacattctctaggccaaaaggcattattacccattcat 13276241  T
Q  109 acgtgcctaaatctcctggacaccaaaatgttgttttagacacatcttcatcagcgatg-aaatttgattgtaactagaatagctatcgagcatactcaa 207  Q
    | || |||||| ||||||| || |||||||||||||| ||||||||||  ||||  ||| |||||||||| ||||  ||||||| ||| |||||||||||    
T  13276242 aagtacctaaagctcctgggcatcaaaatgttgtttttgacacatcttattcagtaatgaaaatttgattataaccggaatagccatcaagcatactcaa 13276341  T
Q  208 gtattcaaatcatgctgcagaatcaactagcatttctaccactggcataggatattcatcctttggtgtagcattgttcaggtctctaaagtctatacaa 307  Q
    ||||||||||| || |||||||  ||||||||| ||| | || |||||  ||| || |||  |||||||||||||||| | ||||| |||||||||||||    
T  13276342 gtattcaaatcctgttgcagaacgaactagcatctcttctaccggcatgagatgtttatctgttggtgtagcattgtttaagtctccaaagtctatacaa 13276441  T
Q  308 actctaagaattccatttttaataattacag 338  Q
    |||||||||  |||| ||||  |||||||||    
T  13276442 actctaagagatccaattttcttaattacag 13276472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 16033541 - 16033606
Alignment:
Q  1 tgtaaatatgcataaatttatcaacaaaatcatgaaacattgaattcattactctttggtatgtag 66  Q
    ||||||| |||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||    
T  16033541 tgtaaatttgcataaatttatcaataaaatcatgaaacattgaactcatttctctttggtatgtag 16033606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 246 - 338
Target Start/End: Original strand, 16033762 - 16033854
Alignment:
Q  246 ccactggcataggatattcatcctttggtgtagcattgttcaggtctctaaagtctatacaaactctaagaattccatttttaataattacag 338  Q
    ||||||||||| |||||||||||||||||||||||||||| |  || ||||||| ||| ||||||||||||  |||||||||  |||||||||    
T  16033762 ccactggcataagatattcatcctttggtgtagcattgttgaaatccctaaagtttattcaaactctaagagatccatttttcttaattacag 16033854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 124; Significance: 1e-63; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 71 - 304
Target Start/End: Original strand, 16164174 - 16164409
Alignment:
Q  71 agcattctttaagccgaaaggaattactaccc-attcgtacgtgcctaaatctcctggacaccaaaatgttgttttagacacatcttcatcagcgatgaa 169  Q
    |||||||| || ||| |||||||||||||||| ||||||| || |||||| || |||||||   ||||| |||||| || |||| ||| ||||| |||||    
T  16164174 agcattctataggccaaaaggaattactaccccattcgtaagtacctaaagcttctggacattgaaatgatgtttttgatacatgttcttcagcaatgaa 16164273  T
Q  170 -atttgattgtaactagaatagctatcgagcatactcaagtattcaaatcatgctgcagaatcaactagcatttctaccactggcataggatattcatcc 268  Q
     ||||||||||||| ||||||||  ||||||||||||| ||||||||||| ||||||||||||||||||||||| | ||||||||||||||||| |||||    
T  16164274 tatttgattgtaaccagaatagccgtcgagcatactcatgtattcaaatcctgctgcagaatcaactagcatttgtgccactggcataggatatgcatcc 16164373  T
Q  269 tttggtgtagcattgttcaggtctctaaagtctata 304  Q
    ||||||||||||||||||||||||||||||||||||    
T  16164374 tttggtgtagcattgttcaggtctctaaagtctata 16164409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 11 - 240
Target Start/End: Complemental strand, 19724577 - 19724347
Alignment:
Q  11 cataaatttatcaacaaaatcatgaaacattgaattcattactctttggtatgtagaaccagcattctttaagccgaaaggaattactacccattcgtac 110  Q
    |||||||||||||| ||||||||| |||||| |||||||| ||||||||| ||||| |||| |||||||||  || ||||| || ||||||||||||||     
T  19724577 cataaatttatcaataaaatcatggaacattaaattcatttctctttggtttgtagcaccaacattctttagaccaaaaggcatcactacccattcgtaa 19724478  T
Q  111 gtgcctaaatctcctggacaccaaaatgttgttttagacacatcttcatcagcgatga-aatttgattgtaactagaatagctatcgagcatactcaagt 209  Q
    ||||||||| ||||  |||| | |||||||||||| ||||  ||||| ||||| ||||  |||| |||||||| | |||| | ||| | |||||| ||||    
T  19724477 gtgcctaaagctccgagacatcgaaatgttgtttttgacatttcttcttcagcaatgaggattttattgtaaccaaaataaccatcaaacatactaaagt 19724378  T
Q  210 attcaaatcatgctgcagaatcaactagcat 240  Q
    ||||||| | |||||| ||||||| ||||||    
T  19724377 attcaaaacctgctgctgaatcaattagcat 19724347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 327
Target Start/End: Original strand, 17806931 - 17807258
Alignment:
Q  1 tgtaaatatgcataaatttatcaacaaaatcatgaaacattgaattcattactctttggtatgtagaaccagcattctttaagccgaaaggaattactac 100  Q
    ||||||| ||||||| |||  | | ||||||||||||||| ||||||||| ||||||| ||   || |||| |||| ||||  || ||||| |||||||     
T  17806931 tgtaaatttgcataactttccctataaaatcatgaaacatagaattcattgctctttgataacaagcaccaacattttttagaccaaaaggcattactat 17807030  T
Q  101 ccattcgtacgtgcctaaatctcctggacaccaaaatgttgttttagacacatcttcatcagcgatgaa-atttgattgtaactagaatagctatcgagc 199  Q
    |||||| ||    |||||| |  ||||| | | ||| |  |||||||| || ||||| | ||| ||| | |||||||| || | |||||| | ||| |||    
T  17807031 ccattcataacaacctaaagcctctggatatctaaaagcggttttagatacgtcttcttaagcaatgtatatttgattataccaagaataaccatctagc 17807130  T
Q  200 atactcaagtattcaaatcatgctgcagaatcaactagcatttctaccactggcataggatattcatcctttggtgtagcattgttcaggtctctaaagt 299  Q
    || || || |||||||| | || ||| |||||||| ||||| ||| ||||||||||||| |||||||| ||||| |||||   ||| |  || ||||| |    
T  17807131 atgcttaaatattcaaaacctggtgctgaatcaacaagcatctctgccactggcatagggtattcatcttttggagtagctaagtttaaatccctaaaat 17807230  T
Q  300 ctatacaaactctaagaattccattttt 327  Q
    ||||||| ||||||||| | ||||||||    
T  17807231 ctatacagactctaagagtcccattttt 17807258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 16164127 - 16164173
Alignment:
Q  3 taaatatgcataaatttatcaacaaaatcatgaaacattgaattcat 49  Q
    ||||| |||||||||||||||| |||||| |||||||||||||||||    
T  16164127 taaatttgcataaatttatcaataaaatcgtgaaacattgaattcat 16164173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 327
Target Start/End: Complemental strand, 19724333 - 19724279
Alignment:
Q  273 gtgtagcattgttcaggtctctaaagtctatacaaactctaagaattccattttt 327  Q
    |||||||||||||||||||| || |||||||||| ||| ||||| ||||||||||    
T  19724333 gtgtagcattgttcaggtctttatagtctatacagactataagagttccattttt 19724279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 2e-28; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 264
Target Start/End: Original strand, 268640 - 268896
Alignment:
Q  9 tgcataaatttatcaacaaaatcatgaaacattgaattcattactctttggtatgtagaaccagcattctttaagccgaaaggaattactacccattcgt 108  Q
    |||||||||||| |||  ||| |||| ||||||||||||||| ||||||||||||||| |||| |||||||||  || ||||| ||||||||| |||| |    
T  268640 tgcataaatttaccaatgaaaacatggaacattgaattcattgctctttggtatgtagcaccaacattctttagaccaaaaggcattactaccaattcat 268739  T
Q  109 acgtgcctaaatctcctggacaccaaaatgttgttttagacacatcttcatcagcgatgaa-atttgattgtaactagaatagctatcgagcatactcaa 207  Q
    |    |||||| ||| ||| ||   |||||   |||| ||||   |||| ||| | ||||| |||||||| ||||  |||||||  ||||||||||||||    
T  268740 aataacctaaagctcatgggcattgaaatgccatttttgacatgccttcttcaacaatgaagatttgattataaccggaatagccgtcgagcatactcaa 268839  T
Q  208 gtattcaaatcatgctgcagaatcaactagcatttctaccactggcataggatattc 264  Q
    ||||||||||  |||| || |||||| |||||||||| ||| |||||||||||||||    
T  268840 gtattcaaatgctgctacataatcaagtagcatttctgccattggcataggatattc 268896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 132 - 337
Target Start/End: Original strand, 8990569 - 8990774
Alignment:
Q  132 caaaatgttgttttagacacatcttcatcagcgat-gaaatttgattgtaactagaatagctatcgagcatactcaagtattcaaatcatgctgcagaat 230  Q
    |||||||||||||| ||||||||||  ||| | ||  |||||||||| |||| ||| || | ||| | |||||||||||||||||||| |  ||  ||||    
T  8990569 caaaatgttgtttttgacacatcttgttcaacaataaaaatttgattataaccagagtaaccatcaaacatactcaagtattcaaatcctaatgttgaat 8990668  T
Q  231 caactagcatttctaccactggcataggatattcatcctttggtgtagcattgttcaggtctctaaagtctatacaaactctaagaattccatttttaat 330  Q
    ||||||||| |||| || |||||||| |||||||||||||||||||| |||| || |  || ||||| |||||||||| ||||||| |  |||||||  |    
T  8990669 caactagca-ttctgccgctggcatatgatattcatcctttggtgtaacattatttaattccctaaaatctatacaaattctaagagtcacatttttctt 8990767  T
Q  331 aattaca 337  Q
    |||||||    
T  8990768 aattaca 8990774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 220 - 327
Target Start/End: Complemental strand, 14139492 - 14139385
Alignment:
Q  220 tgctgcagaatcaactagcatttctaccactggcataggatattcatcctttggtgtagcattgttcaggtctctaaagtctatacaaactctaagaatt 319  Q
    |||||| ||||| || |||||||||||||||| ||||||||| |||||||| || ||||| | ||| | ||||||||| || ||||||||||||||| |     
T  14139492 tgctgctgaatcgacaagcatttctaccactgacataggataatcatccttaggagtagcttggtttaagtctctaaaatcaatacaaactctaagagtc 14139393  T
Q  320 ccattttt 327  Q
    ||||||||    
T  14139392 ccattttt 14139385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 220 - 327
Target Start/End: Complemental strand, 14140304 - 14140197
Alignment:
Q  220 tgctgcagaatcaactagcatttctaccactggcataggatattcatcctttggtgtagcattgttcaggtctctaaagtctatacaaactctaagaatt 319  Q
    |||||| ||||| || |||||||||||||||  ||||||||| |||||||| || ||||| | ||| | ||||||||| || ||||||||||||||| |     
T  14140304 tgctgctgaatcgacaagcatttctaccactaacataggataatcatccttaggagtagcttggtttaagtctctaaaatcaatacaaactctaagagtc 14140205  T
Q  320 ccattttt 327  Q
    ||||||||    
T  14140204 ccattttt 14140197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 173 - 310
Target Start/End: Complemental strand, 12813937 - 12813800
Alignment:
Q  173 tgattgtaactagaatagctatcgagcatactcaagtattcaaatcatgctgcagaatcaactagcatttctaccactggcataggatattcatcctttg 272  Q
    |||||||| | ||| ||||  |||||||||||||  ||||| |||| |||||||||||| || ||||||||| |||| |||||  |  ||||||||||||    
T  12813937 tgattgtaccaagagtagccgtcgagcatactcagatattcgaatcttgctgcagaatcgacaagcatttcttccaccggcatttggcattcatcctttg 12813838  T
Q  273 gtgtagcattgttcaggtctctaaagtctatacaaact 310  Q
    |||| || ||||| |  |||||||||||||||||||||    
T  12813837 gtgtcgccttgtttaaatctctaaagtctatacaaact 12813800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 264
Target Start/End: Original strand, 14770972 - 14771066
Alignment:
Q  170 atttgattgtaactagaatagctatcgagcatactcaagtattcaaatcatgctgcagaatcaactagcatttctaccactggcataggatattc 264  Q
    |||||||| |||| |||||| | ||| |||||||||||||| ||||| |  || || ||||| |||||||||||||| || ||||| || |||||    
T  14770972 atttgattataaccagaatatccatctagcatactcaagtaatcaaaacccgccgctgaatctactagcatttctactacaggcattgggtattc 14771066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 222 - 327
Target Start/End: Original strand, 49371 - 49476
Alignment:
Q  222 ctgcagaatcaactagcatttctaccactggcataggatattcatcctttggtgtagcattgttcaggtctctaaagtctatacaaactctaagaattcc 321  Q
    |||| ||||| |||||||||||| ||||||||||||| ||||||||||| || |||||   ||||| ||||||||| || ||||| ||||| |||||  |    
T  49371 ctgctgaatcgactagcatttctgccactggcatagggtattcatccttaggagtagctaagttcaagtctctaaaatccatacagactctgagaatctc 49470  T
Q  322 attttt 327  Q
    ||||||    
T  49471 attttt 49476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 222 - 318
Target Start/End: Original strand, 26866293 - 26866389
Alignment:
Q  222 ctgcagaatcaactagcatttctaccactggcataggatattcatcctttggtgtagcattgttcaggtctctaaagtctatacaaactctaagaat 318  Q
    |||| ||||| |||||||||||| ||||||||||||| ||||||||||| || |||||   ||||| ||||||||| || ||||| ||||| |||||    
T  26866293 ctgctgaatcgactagcatttctgccactggcatagggtattcatccttaggagtagctaagttcaagtctctaaaatccatacagactctgagaat 26866389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 251
Target Start/End: Complemental strand, 5378 - 5324
Alignment:
Q  197 agcatactcaagtattcaaatcatgctgcagaatcaactagcatttctaccactg 251  Q
    |||||||| || ||||||||||||||||| |||||||||| ||||||| ||||||    
T  5378 agcatacttaaatattcaaatcatgctgctgaatcaactaacatttctgccactg 5324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0401 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 327
Target Start/End: Complemental strand, 5500 - 5400
Alignment:
Q  227 gaatcaactagcatttctaccactggcataggatattcatcctttggtgtagcattgttcaggtctctaaagtctatacaaactctaagaattccatttt 326  Q
    ||||| || ||||||||| ||| ||| |||||||||||||||||  | ||||| |  || | ||| ||||| |||||||||||||||||| | |||||||    
T  5500 gaatcgacaagcatttctgccattggaataggatattcatccttatgagtagcttgatttaagtccctaaaatctatacaaactctaagagtcccatttt 5401  T
Q  327 t 327  Q
    |    
T  5400 t 5400  T

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Target: chr2 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 66
Target Start/End: Original strand, 23812263 - 23812299
Alignment:
Q  30 tcatgaaacattgaattcattactctttggtatgtag 66  Q
    ||||||||||| |||||||||||||||||||||||||    
T  23812263 tcatgaaacatcgaattcattactctttggtatgtag 23812299  T

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Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 327
Target Start/End: Original strand, 25114378 - 25114705
Alignment:
Q  1 tgtaaatatgcataaatttatcaacaaaatcatgaaacattgaattcattactctttggtatgtagaaccagcattctttaagccgaaaggaattactac 100  Q
    ||||||| |||||||||||  | | ||||||||||||||| ||||||||| ||||||| ||   || || |||||| ||||  || ||||| || ||||     
T  25114378 tgtaaatttgcataaatttccctataaaatcatgaaacatagaattcattgctctttgatagcaagcactagcattttttagaccaaaaggcataactat 25114477  T
Q  101 ccattcgtacgtgcctaaatctcctggacaccaaaatgttgttttagacacatcttcatcagcgatg-aaatttgattgtaactagaatagctatcgagc 199  Q
    |||||| ||    || ||| | |||||| | | ||| |  || ||||| |  ||||| ||| | ||| | | ||||||||| | |||||||| ||| | |    
T  25114478 ccattcataacaacccaaagcccctggatatctaaaagcagtcttagaaatgtcttcttcaacaatgtatacttgattgtacccagaatagccatctaac 25114577  T
Q  200 atactcaagtattcaaatcatgctgcagaatcaactagcatttctaccactggcataggatattcatcctttggtgtagcattgttcaggtctctaaagt 299  Q
    |  || || ||||||   |||| || ||||||||| ||||||||| ||||||| ||||| |||||||| ||||| |||||   ||||| ||||||||| |    
T  25114578 aagcttaaatattcatggcatgttgtagaatcaacaagcatttctgccactggaatagggtattcatcttttggggtagctaagttcaagtctctaaaat 25114677  T
Q  300 ctatacaaactctaagaattccattttt 327  Q
    ||||| | ||||||||| | ||||||||    
T  25114678 ctatatagactctaagagtcccattttt 25114705  T

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Target: scaffold0013 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 170 - 265
Target Start/End: Complemental strand, 150700 - 150605
Alignment:
Q  170 atttgattgtaactagaatagctatcgagcatactcaagtattcaaatcatgctgcagaatcaactagcatttctaccactggcataggatattca 265  Q
    ||||||||||| || |||||||  || |||||||||||||| || || |  || || |||||||||||||||||| |||| ||||| || ||||||    
T  150700 atttgattgtaccttgaatagccgtctagcatactcaagtactcgaaacccgccgctgaatcaactagcatttctgccacaggcattgggtattca 150605  T

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Target: scaffold0001 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 106
Target Start/End: Complemental strand, 92995 - 92916
Alignment:
Q  27 aaatcatgaaacattgaattcattactctttggtatgtagaaccagcattctttaagccgaaaggaattactacccattc 106  Q
    ||||||||||||||| |||||||  |||| |||||||||| ||||||||| ||||  || || || ||||||| ||||||    
T  92995 aaatcatgaaacattaaattcatcgctctctggtatgtagcaccagcattttttagaccaaatggcattactagccattc 92916  T

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Target: scaffold0053 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 306
Target Start/End: Original strand, 40652 - 40806
Alignment:
Q  153 tcttcatcagcgatgaa-atttgattgtaactagaatagctatcgagcatactcaagtattcaaatcatgctgcagaatcaactagcatttctaccactg 251  Q
    ||||| ||||| ||||| |||||||| ||||  ||||||| ||| ||||||||||||||||| || |  |  || ||||| |||||||||||| |||| |    
T  40652 tcttcttcagcaatgaagatttgattataacctgaatagccatctagcatactcaagtattcgaaacccgtcgctgaatctactagcatttctgccacag 40751  T
Q  252 gcataggatattcatcctttggtgtagcattgttcaggtctctaaagtctataca 306  Q
    |||| || ||||| || || || |||||    ||||  |||||||||||||||||    
T  40752 gcattgggtattcgtctttaggggtagcgagattcaaatctctaaagtctataca 40806  T

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Target: scaffold0005 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 264
Target Start/End: Complemental strand, 68758 - 68664
Alignment:
Q  170 atttgattgtaactagaatagctatcgagcatactcaagtattcaaatcatgctgcagaatcaactagcatttctaccactggcataggatattc 264  Q
    |||||||| |||| |||||| | ||| |||||||||||||| ||||| |  || || ||||| |||||||||||||| || ||||| || |||||    
T  68758 atttgattataaccagaatatccatctagcatactcaagtaatcaaaacccgccgctgaatctactagcatttctactacaggcattgggtattc 68664  T

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