View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19390_low_14 (Length: 235)
Name: NF19390_low_14
Description: NF19390
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19390_low_14 |
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Alignment Details
Target: chr3 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 8 - 214
Target Start/End: Complemental strand, 53805219 - 53805013
Alignment:
| Q |
8 |
gagtgagatgaatgtagcaattctccgaaaatggaatctgtgaaaggtttttctgaaacagtgaaagagattcagattctatttgaaagggcatcggatt |
107 |
Q |
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| T |
53805219 |
gagttagaagaatgtagcaattctccgaaaatggaatctgtgaaaggtttttctgaaacagtgaaagagattcagattctatttgaaagggcatcggatt |
53805120 |
T |
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| Q |
108 |
cagggaatgtgattttggaaatgctagacgttggaaaacttcgttaccattcaaaaattgaactcaatccaggtaagcaagcaagttgtacaatttaatt |
207 |
Q |
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| T |
53805119 |
cagggaatgtgattttggaaatgctagacgttggaaaacttcgttaccattcaaaaattgaactcaatccaggtaagcaagcaagttgtacaatttaatt |
53805020 |
T |
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| Q |
208 |
agtcatt |
214 |
Q |
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||||||| |
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| T |
53805019 |
agtcatt |
53805013 |
T |
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