View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19390_low_5 (Length: 442)
Name: NF19390_low_5
Description: NF19390
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19390_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 386; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 386; E-Value: 0
Query Start/End: Original strand, 15 - 424
Target Start/End: Original strand, 42038150 - 42038559
Alignment:
| Q |
15 |
cacagacactcacacaagattctacggttccaactcatggctggatgtgtctcccactcatagaagaagtatgcactgccaagattttaccgagaaacac |
114 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42038150 |
cacagacactcacacaagattctacggttccaactcacggctggatgtgtctcccactcatagaagaagtatgcactgccaagattttaccgagaaacac |
42038249 |
T |
|
| Q |
115 |
ttccaccatcaaaattttgccctatcgatcaaactttgccctatccaacaagaactcaacataaatagatcatcccaacaaagattagatcattgtgaga |
214 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42038250 |
ttccacgatcaaaattttgccctatcgatcaaactttgccctatccaacaagaactcaacataaatagatcatcccaacaaagattagatcattgtgaga |
42038349 |
T |
|
| Q |
215 |
gttccaaatagtccgctagacaacatgtcatacaagcgtcatgtcaaacaagcgtcaaacataacctaaccatcttactataacccaacccccaaaaaga |
314 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
42038350 |
gttccaaatagtccgctagacaacatgtcatacaagcgccatgtcaaacaagcgtcaaacataacctgaccatcttactataacccaacccccaaaaaga |
42038449 |
T |
|
| Q |
315 |
cacaaaagcaaccaagatcctgaagaagaacaaactgccaacccaactatccaactatacaataccacatagagaggatggtgtcaaaggacatgaacaa |
414 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
42038450 |
cacaaaagcaaccaagatcctgaagaagaacaaactgccaacccaaccatccaactatacaataccacatagagacgatggtgtcaaaggacatgaacaa |
42038549 |
T |
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| Q |
415 |
gtgaatcacc |
424 |
Q |
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|||||||||| |
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| T |
42038550 |
gtgaatcacc |
42038559 |
T |
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