View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19391_high_20 (Length: 223)

Name: NF19391_high_20
Description: NF19391
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19391_high_20
NF19391_high_20
[»] chr5 (4 HSPs)
chr5 (19-73)||(42561969-42562023)
chr5 (19-66)||(29696607-29696654)
chr5 (19-52)||(179429-179462)
chr5 (19-67)||(9120134-9120182)
[»] chr4 (24 HSPs)
chr4 (19-77)||(7908673-7908731)
chr4 (19-73)||(48864406-48864460)
chr4 (19-143)||(49038444-49038568)
chr4 (19-67)||(50666686-50666734)
chr4 (19-70)||(7790451-7790502)
chr4 (19-70)||(7878754-7878805)
chr4 (27-127)||(48853060-48853166)
chr4 (19-77)||(7771766-7771824)
chr4 (19-73)||(7786835-7786889)
chr4 (27-73)||(45371710-45371756)
chr4 (19-64)||(48147358-48147403)
chr4 (19-67)||(37826632-37826680)
chr4 (19-67)||(49043810-49043858)
chr4 (19-73)||(7766013-7766067)
chr4 (19-77)||(7773457-7773515)
chr4 (27-77)||(7813856-7813906)
chr4 (19-73)||(45384528-45384582)
chr4 (19-73)||(48156065-48156119)
chr4 (19-66)||(48863636-48863683)
chr4 (19-73)||(7237379-7237433)
chr4 (27-77)||(7801016-7801066)
chr4 (19-77)||(48870931-48870989)
chr4 (19-77)||(48876235-48876293)
chr4 (19-77)||(48886617-48886675)
[»] chr1 (8 HSPs)
chr1 (23-69)||(24367540-24367586)
chr1 (19-70)||(24323141-24323192)
chr1 (19-69)||(24416149-24416199)
chr1 (27-70)||(24340790-24340833)
chr1 (27-70)||(24353155-24353198)
chr1 (37-70)||(24369830-24369863)
chr1 (19-67)||(24310587-24310635)
chr1 (91-127)||(24367608-24367644)
[»] chr7 (3 HSPs)
chr7 (18-71)||(48884194-48884247)
chr7 (19-65)||(30165868-30165914)
chr7 (19-55)||(30130916-30130952)
[»] chr3 (2 HSPs)
chr3 (27-66)||(11024146-11024185)
chr3 (27-66)||(11005571-11005610)
[»] chr6 (3 HSPs)
chr6 (19-73)||(21979264-21979318)
chr6 (27-64)||(21016200-21016237)
chr6 (19-55)||(14197337-14197373)


Alignment Details
Target: chr5 (Bit Score: 47; Significance: 5e-18; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 42562023 - 42561969
Alignment:
Q  19 ggtgatggaagaatacaaagtgcattcatcttggactaagactcttgttcttcct 73  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  42562023 ggtgatgaaagaatacaaagtgcattcatcttggactaagattcttgttcttcct 42561969  T

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Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 29696607 - 29696654
Alignment:
Q  19 ggtgatggaagaatacaaagtgcattcatcttggactaagactcttgt 66  Q
    |||||||||| ||||||| ||||| || ||||||||||||||||||||    
T  29696607 ggtgatggaaaaatacaatgtgcaatcctcttggactaagactcttgt 29696654  T

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Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 52
Target Start/End: Original strand, 179429 - 179462
Alignment:
Q  19 ggtgatggaagaatacaaagtgcattcatcttgg 52  Q
    ||||||| ||||||||||||||||||||||||||    
T  179429 ggtgatgaaagaatacaaagtgcattcatcttgg 179462  T

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Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 9120134 - 9120182
Alignment:
Q  19 ggtgatggaagaatacaaagtgcattcatcttggactaagactcttgtt 67  Q
    ||||||| ||||||||||||||||||| |||||||  || |||||||||    
T  9120134 ggtgatgaaagaatacaaagtgcattcctcttggaagaaaactcttgtt 9120182  T

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Target: chr4 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 7908673 - 7908731
Alignment:
Q  19 ggtgatggaagaatacaaagtgcattcatcttggactaagactcttgttcttcctgttg 77  Q
    ||||||| ||||||||||||||||||||||||||| ||| |||||||||||| ||||||    
T  7908673 ggtgatgaaagaatacaaagtgcattcatcttggaataaaactcttgttctttctgttg 7908731  T

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Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 48864406 - 48864460
Alignment:
Q  19 ggtgatggaagaatacaaagtgcattcatcttggactaagactcttgttcttcct 73  Q
    ||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||    
T  48864406 ggtgatgaaagaatacaaagtgcattcgtcttggactaagattcttgttcttcct 48864460  T

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Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 143
Target Start/End: Complemental strand, 49038568 - 49038444
Alignment:
Q  19 ggtgatggaagaatacaaagtgcattcatcttggactaagactcttgttcttcctgttggtcccaccgacttcattttccctatatgttgtacaaagagt 118  Q
    ||||||| ||||||||||||| ||||| |||||||||||||||||||||||  || || ||  ||    || | ||| |||||||||||||||||| |||    
T  49038568 ggtgatgaaagaatacaaagttcattcgtcttggactaagactcttgttctgtctattagtggcattccctacttttcccctatatgttgtacaaaaagt 49038469  T
Q  119 ggtgatattgtagtaacagatggtt 143  Q
    ||| ||||| | | |||||||||||    
T  49038468 ggtcatattattggaacagatggtt 49038444  T

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Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 50666686 - 50666734
Alignment:
Q  19 ggtgatggaagaatacaaagtgcattcatcttggactaagactcttgtt 67  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  50666686 ggtgatgtaagaatacaaagtgcattcatcttggactaaaactcttgtt 50666734  T

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Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 7790451 - 7790502
Alignment:
Q  19 ggtgatggaagaatacaaagtgcattcatcttggactaagactcttgttctt 70  Q
    ||||||| ||||||||||||||||||| ||||||||||| ||||||||||||    
T  7790451 ggtgatgaaagaatacaaagtgcattcgtcttggactaaaactcttgttctt 7790502  T

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Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 7878754 - 7878805
Alignment:
Q  19 ggtgatggaagaatacaaagtgcattcatcttggactaagactcttgttctt 70  Q
    ||||||| ||||||||||||||||||||||||||| ||| ||||||||||||    
T  7878754 ggtgatgaaagaatacaaagtgcattcatcttggattaaaactcttgttctt 7878805  T

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Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 27 - 127
Target Start/End: Original strand, 48853060 - 48853166
Alignment:
Q  27 aagaatacaaagtgcattcatcttggactaagactcttgttcttcctgttgg------tcccaccgacttcattttccctatatgttgtacaaagagtgg 120  Q
    ||||||||||||||| ||| |||||||||||||||||||||||| || || |      ||||||  ||| | ||| ||| ||||||||||||||||||||    
T  48853060 aagaatacaaagtgcgttcgtcttggactaagactcttgttctttcttttagttccattcccactcactacttttccccaatatgttgtacaaagagtgg 48853159  T
Q  121 tgatatt 127  Q
    |||||||    
T  48853160 tgatatt 48853166  T

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Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 7771766 - 7771824
Alignment:
Q  19 ggtgatggaagaatacaaagtgcattcatcttggactaagactcttgttcttcctgttg 77  Q
    ||||||| ||||||||||||||||||| || |||||||| |||||||||||| ||||||    
T  7771766 ggtgatgaaagaatacaaagtgcattcgtcatggactaaaactcttgttctttctgttg 7771824  T

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Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 7786835 - 7786889
Alignment:
Q  19 ggtgatggaagaatacaaagtgcattcatcttggactaagactcttgttcttcct 73  Q
    ||||||| |||||||||| ||||||| |||||||| |||||||||||||||||||    
T  7786835 ggtgatgaaagaatacaacgtgcatttatcttggaataagactcttgttcttcct 7786889  T

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Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 73
Target Start/End: Complemental strand, 45371756 - 45371710
Alignment:
Q  27 aagaatacaaagtgcattcatcttggactaagactcttgttcttcct 73  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||    
T  45371756 aagaatacaaagtgcattcgtcttggactaagacttttgttcttcct 45371710  T

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Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 48147403 - 48147358
Alignment:
Q  19 ggtgatggaagaatacaaagtgcattcatcttggactaagactctt 64  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||    
T  48147403 ggtgatgaaagaatacaaagtgcattcgtcttggactaagactctt 48147358  T

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Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 37826680 - 37826632
Alignment:
Q  19 ggtgatggaagaatacaaagtgcattcatcttggactaagactcttgtt 67  Q
    ||||||| ||||||||||| ||||||| |||||||||||||||||||||    
T  37826680 ggtgatgaaagaatacaaactgcattcgtcttggactaagactcttgtt 37826632  T

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Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 49043858 - 49043810
Alignment:
Q  19 ggtgatggaagaatacaaagtgcattcatcttggactaagactcttgtt 67  Q
    ||||||| ||||||||||||||||||| || ||||||||||||||||||    
T  49043858 ggtgatgaaagaatacaaagtgcattcgtcatggactaagactcttgtt 49043810  T

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Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 7766013 - 7766067
Alignment:
Q  19 ggtgatggaagaatacaaagtgcattcatcttggactaagactcttgttcttcct 73  Q
    ||||||| |||||||||||||| |||| || ||||||||||| ||||||||||||    
T  7766013 ggtgatgaaagaatacaaagtgtattcgtcatggactaagacacttgttcttcct 7766067  T

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Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 7773515 - 7773457
Alignment:
Q  19 ggtgatggaagaatacaaagtgcattcatcttggactaagactcttgttcttcctgttg 77  Q
    ||||||| ||||||||||||||||||| ||||||| |||  ||||||||||| ||||||    
T  7773515 ggtgatgaaagaatacaaagtgcattcgtcttggattaaatctcttgttctttctgttg 7773457  T

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Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 77
Target Start/End: Original strand, 7813856 - 7813906
Alignment:
Q  27 aagaatacaaagtgcattcatcttggactaagactcttgttcttcctgttg 77  Q
    ||||||||||||||||||| ||||||| ||| |||||||||||| ||||||    
T  7813856 aagaatacaaagtgcattcgtcttggaataaaactcttgttctttctgttg 7813906  T

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Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 45384582 - 45384528
Alignment:
Q  19 ggtgatggaagaatacaaagtgcattcatcttggactaagactcttgttcttcct 73  Q
    ||||||| ||||||| ||||||||||| |||||||| ||||||| ||||||||||    
T  45384582 ggtgatgaaagaatataaagtgcattcgtcttggacaaagactcgtgttcttcct 45384528  T

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Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 48156119 - 48156065
Alignment:
Q  19 ggtgatggaagaatacaaagtgcattcatcttggactaagactcttgttcttcct 73  Q
    ||||||| | ||||||||||||||||| ||||||||||| |||||||| ||||||    
T  48156119 ggtgatgaacgaatacaaagtgcattcttcttggactaaaactcttgtccttcct 48156065  T

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Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 48863636 - 48863683
Alignment:
Q  19 ggtgatggaagaatacaaagtgcattcatcttggactaagactcttgt 66  Q
    ||||||||||||||||  ||||||||||||||||| ||| ||||||||    
T  48863636 ggtgatggaagaatacggagtgcattcatcttggattaaaactcttgt 48863683  T

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Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 7237433 - 7237379
Alignment:
Q  19 ggtgatggaagaatacaaagtgcattcatcttggactaagactcttgttcttcct 73  Q
    ||||||| ||||||||||| ||||||| | ||||||||| |||||||| ||||||    
T  7237433 ggtgatgaaagaatacaaaatgcattcgttttggactaaaactcttgtgcttcct 7237379  T

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Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 77
Target Start/End: Original strand, 7801016 - 7801066
Alignment:
Q  27 aagaatacaaagtgcattcatcttggactaagactcttgttcttcctgttg 77  Q
    |||| |||||||||||||| ||||||| ||| |||||||||||| ||||||    
T  7801016 aagattacaaagtgcattcgtcttggaataaaactcttgttctttctgttg 7801066  T

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Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 48870931 - 48870989
Alignment:
Q  19 ggtgatggaagaatacaaagtgcattcatcttggactaagactcttgttcttcctgttg 77  Q
    ||||||| | |||||||||||| | || |||||||| ||||||||||||||| ||||||    
T  48870931 ggtgatgaatgaatacaaagtgaactcgtcttggacaaagactcttgttctttctgttg 48870989  T

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Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 48876235 - 48876293
Alignment:
Q  19 ggtgatggaagaatacaaagtgcattcatcttggactaagactcttgttcttcctgttg 77  Q
    ||||||| | |||||||||||| | || |||||||| ||||||||||||||| ||||||    
T  48876235 ggtgatgaatgaatacaaagtgaactcgtcttggacaaagactcttgttctttctgttg 48876293  T

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Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 48886617 - 48886675
Alignment:
Q  19 ggtgatggaagaatacaaagtgcattcatcttggactaagactcttgttcttcctgttg 77  Q
    ||||||| | |||||||||||| | || |||||||| ||||||||||||||| ||||||    
T  48886617 ggtgatgaatgaatacaaagtgaactcgtcttggacaaagactcttgttctttctgttg 48886675  T

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Target: chr1 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 69
Target Start/End: Original strand, 24367540 - 24367586
Alignment:
Q  23 atggaagaatacaaagtgcattcatcttggactaagactcttgttct 69  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||    
T  24367540 atggaagaatacaaagtgcattcgtcttggactaaaactcttgttct 24367586  T

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Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 24323141 - 24323192
Alignment:
Q  19 ggtgatggaagaatacaaagtgcattcatcttggactaagactcttgttctt 70  Q
    ||||||| |||||||||||||||| ||||||| |||||| ||||||||||||    
T  24323141 ggtgatgaaagaatacaaagtgcagtcatcttcgactaaaactcttgttctt 24323192  T

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Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 24416149 - 24416199
Alignment:
Q  19 ggtgatggaagaatacaaagtgcattcatcttggactaagactcttgttct 69  Q
    ||||||| |||||||||||| ||| |||||||||||||| |||||||||||    
T  24416149 ggtgatgaaagaatacaaagggcagtcatcttggactaaaactcttgttct 24416199  T

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Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 70
Target Start/End: Original strand, 24340790 - 24340833
Alignment:
Q  27 aagaatacaaagtgcattcatcttggactaagactcttgttctt 70  Q
    ||||||| |||||||| |||||||||||||| ||||||||||||    
T  24340790 aagaatataaagtgcagtcatcttggactaaaactcttgttctt 24340833  T

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Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 70
Target Start/End: Original strand, 24353155 - 24353198
Alignment:
Q  27 aagaatacaaagtgcattcatcttggactaagactcttgttctt 70  Q
    ||||||| |||||||| |||||||||||||| ||||||||||||    
T  24353155 aagaatataaagtgcagtcatcttggactaaaactcttgttctt 24353198  T

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Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 70
Target Start/End: Original strand, 24369830 - 24369863
Alignment:
Q  37 agtgcattcatcttggactaagactcttgttctt 70  Q
    ||||||||||||||||||||| ||||||||||||    
T  24369830 agtgcattcatcttggactaaaactcttgttctt 24369863  T

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Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 24310587 - 24310635
Alignment:
Q  19 ggtgatggaagaatacaaagtgcattcatcttggactaagactcttgtt 67  Q
    ||||||| |||||||||||||||| || ||||||| ||| |||||||||    
T  24310587 ggtgatgaaagaatacaaagtgcagtcttcttggagtaaaactcttgtt 24310635  T

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Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 127
Target Start/End: Original strand, 24367608 - 24367644
Alignment:
Q  91 cattttccctatatgttgtacaaagagtggtgatatt 127  Q
    |||||||||||||||||||||||| | ||||||||||    
T  24367608 cattttccctatatgttgtacaaaaactggtgatatt 24367644  T

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Target: chr7 (Bit Score: 38; Significance: 0.000000000001; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 48884194 - 48884247
Alignment:
Q  18 aggtgatggaagaatacaaagtgcattcatcttggactaagactcttgttcttc 71  Q
    |||||||| |||||||||||||||||   |||||||||||||||||||||||||    
T  48884194 aggtgatgaaagaatacaaagtgcatatgtcttggactaagactcttgttcttc 48884247  T

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Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 30165868 - 30165914
Alignment:
Q  19 ggtgatggaagaatacaaagtgcattcatcttggactaagactcttg 65  Q
    ||||||| ||||||||  |||||||||||||||||||| ||||||||    
T  30165868 ggtgatgcaagaatacgcagtgcattcatcttggactacgactcttg 30165914  T

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Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 30130952 - 30130916
Alignment:
Q  19 ggtgatggaagaatacaaagtgcattcatcttggact 55  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  30130952 ggtgatgcaagaatacacagtgcattcatcttggact 30130916  T

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Target: chr3 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 66
Target Start/End: Complemental strand, 11024185 - 11024146
Alignment:
Q  27 aagaatacaaagtgcattcatcttggactaagactcttgt 66  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  11024185 aagaatacaaagtgcattcgtcttggactaagactcttgt 11024146  T

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Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 66
Target Start/End: Complemental strand, 11005610 - 11005571
Alignment:
Q  27 aagaatacaaagtgcattcatcttggactaagactcttgt 66  Q
    ||||||||||||||||||| |||||||||||| |||||||    
T  11005610 aagaatacaaagtgcattcgtcttggactaaggctcttgt 11005571  T

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Target: chr6 (Bit Score: 31; Significance: 0.00000002; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 21979318 - 21979264
Alignment:
Q  19 ggtgatggaagaatacaaagtgcattcatcttggactaagactcttgttcttcct 73  Q
    ||||||| ||||||||||||||| ||| ||||||| |||||  ||||||||||||    
T  21979318 ggtgatgaaagaatacaaagtgcgttcctcttggaataagaaacttgttcttcct 21979264  T

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Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 64
Target Start/End: Original strand, 21016200 - 21016237
Alignment:
Q  27 aagaatacaaagtgcattcatcttggactaagactctt 64  Q
    ||||||||||||| ||||| ||||||||||||||||||    
T  21016200 aagaatacaaagtacattcgtcttggactaagactctt 21016237  T

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Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 14197373 - 14197337
Alignment:
Q  19 ggtgatggaagaatacaaagtgcattcatcttggact 55  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  14197373 ggtgatgaaagaatacaaaatgcattcatcttggact 14197337  T

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