View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19391_low_15 (Length: 277)

Name: NF19391_low_15
Description: NF19391
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19391_low_15
NF19391_low_15
[»] chr7 (11 HSPs)
chr7 (1-260)||(46472649-46472909)
chr7 (1-53)||(39293042-39293094)
chr7 (1-45)||(28719392-28719436)
chr7 (1-45)||(44306483-44306527)
chr7 (1-45)||(4483665-4483709)
chr7 (1-45)||(44306446-44306490)
chr7 (1-45)||(45148443-45148487)
chr7 (1-45)||(16382448-16382492)
chr7 (1-45)||(16382485-16382529)
chr7 (1-45)||(39293005-39293049)
chr7 (1-45)||(44306409-44306453)
[»] chr3 (9 HSPs)
chr3 (111-258)||(35773456-35773603)
chr3 (1-45)||(38376997-38377041)
chr3 (1-46)||(17759669-17759714)
chr3 (1-46)||(19060989-19061034)
chr3 (1-45)||(5229299-5229343)
chr3 (1-45)||(11401475-11401519)
chr3 (1-45)||(11401512-11401556)
chr3 (1-45)||(11516784-11516828)
chr3 (1-45)||(17392279-17392323)
[»] chr6 (8 HSPs)
chr6 (1-53)||(22594793-22594845)
chr6 (1-45)||(22594756-22594800)
chr6 (1-45)||(23220638-23220682)
chr6 (1-45)||(29161669-29161713)
chr6 (1-45)||(16135220-16135264)
chr6 (1-35)||(11374084-11374118)
chr6 (1-35)||(17084543-17084577)
chr6 (1-45)||(29161743-29161787)
[»] scaffold0317 (2 HSPs)
scaffold0317 (1-45)||(15073-15117)
scaffold0317 (1-45)||(15036-15080)
[»] chr8 (18 HSPs)
chr8 (1-45)||(16000940-16000984)
chr8 (1-45)||(20177244-20177288)
chr8 (1-45)||(20221971-20222015)
chr8 (1-45)||(25756889-25756933)
chr8 (1-45)||(20177207-20177251)
chr8 (1-45)||(20221934-20221978)
chr8 (1-44)||(22312607-22312650)
chr8 (3-38)||(24238489-24238524)
chr8 (4-45)||(19332787-19332828)
chr8 (1-34)||(25294880-25294913)
chr8 (1-38)||(25608964-25609001)
chr8 (1-45)||(11543451-11543495)
chr8 (1-45)||(19332821-19332865)
chr8 (1-45)||(19332858-19332902)
chr8 (1-45)||(20177170-20177214)
chr8 (1-45)||(20221897-20221941)
chr8 (1-45)||(25294906-25294950)
chr8 (1-45)||(25756926-25756970)
[»] chr5 (7 HSPs)
chr5 (111-219)||(8957791-8957899)
chr5 (1-45)||(20455282-20455326)
chr5 (1-45)||(21108446-21108490)
chr5 (1-45)||(11964887-11964931)
chr5 (1-33)||(14342989-14343021)
chr5 (1-45)||(20455319-20455363)
chr5 (1-45)||(21108409-21108453)
[»] chr4 (6 HSPs)
chr4 (1-45)||(5371883-5371927)
chr4 (1-43)||(17376745-17376787)
chr4 (5-45)||(19558269-19558309)
chr4 (1-45)||(54364757-54364801)
chr4 (1-45)||(5371920-5371964)
chr4 (1-45)||(14570193-14570237)
[»] chr2 (5 HSPs)
chr2 (1-53)||(22331574-22331626)
chr2 (1-45)||(24562056-24562100)
chr2 (1-45)||(18534764-18534808)
chr2 (1-45)||(22331619-22331663)
chr2 (1-45)||(24840704-24840748)
[»] scaffold0090 (3 HSPs)
scaffold0090 (1-43)||(1449-1491)
scaffold0090 (1-43)||(5829-5871)
scaffold0090 (1-45)||(35994-36038)
[»] scaffold0009 (3 HSPs)
scaffold0009 (1-38)||(255662-255699)
scaffold0009 (1-45)||(255625-255669)
scaffold0009 (1-44)||(255551-255594)
[»] scaffold1204 (1 HSPs)
scaffold1204 (1-45)||(1445-1489)
[»] scaffold0231 (2 HSPs)
scaffold0231 (1-45)||(14152-14196)
scaffold0231 (1-45)||(14189-14233)
[»] chr1 (3 HSPs)
chr1 (1-37)||(77228-77264)
chr1 (1-45)||(20821892-20821936)
chr1 (1-45)||(20821929-20821973)
[»] scaffold0183 (1 HSPs)
scaffold0183 (2-45)||(9711-9754)
[»] scaffold0174 (3 HSPs)
scaffold0174 (1-45)||(21272-21316)
scaffold0174 (1-45)||(21309-21353)
scaffold0174 (1-45)||(21346-21390)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-45)||(247139-247183)


Alignment Details
Target: chr7 (Bit Score: 237; Significance: 1e-131; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 260
Target Start/End: Complemental strand, 46472909 - 46472649
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgttccttgtgacaaatttttattgaaggggttgatatcaaagattatgttcaatcaag 100  Q
    |||||||||||||||| |||||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46472909 tatatgttgattgattatgatattattggtgaatagatatatgttgcttgtgacaaatttttattgaaggggttgatatcaaagattatgttcaatcaag 46472810  T
Q  101 gtctcagaaccaaagcaattggaaagtgccaaaggcagagaatgtcaaattaattatgaaatatctcgaggtaaattacaatttgagaagatcaattata 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46472809 gtctcagaaccaaagcaattggaaagtgccaaaggcagagaatgtcaaattaattatgaaatatctcgaggtaaattacaatttgagaagatcaattata 46472710  T
Q  201 agattgttgaa-ttagaacagatattaaggggtcttgttaggattagagacaaggtgaaag 260  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  46472709 agattgttgaatttagaacagatattaaggggtcttgttaggattagagacaaggtgaaag 46472649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 39293042 - 39293094
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgttccttgtga 53  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  39293042 tatatgttgattgattgtgatattattggtgaatacatatatgttgcttgtga 39293094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 28719436 - 28719392
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||    
T  28719436 tatatgttgattgattgtgatattgttggtgaatacatatatgtt 28719392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 44306483 - 44306527
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||    
T  44306483 tatatgttgattgattgtgatattattgatgaatacatatatgtt 44306527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 4483709 - 4483665
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    |||||||||||||||||||||||| ||| ||||||||| ||||||    
T  4483709 tatatgttgattgattgtgatattgttgttgaatacatatatgtt 4483665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 44306446 - 44306490
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    |||||||||||||||||||||||| ||||| ||||||| ||||||    
T  44306446 tatatgttgattgattgtgatattgttggtcaatacatatatgtt 44306490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 45148487 - 45148443
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    ||||||||||||| |||||||||| ||||||||||||| ||||||    
T  45148487 tatatgttgattggttgtgatattgttggtgaatacatatatgtt 45148443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 16382492 - 16382448
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    |||||||| ||||||||||||||| |||||| |||||| ||||||    
T  16382492 tatatgtttattgattgtgatattgttggtggatacatatatgtt 16382448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 16382529 - 16382485
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    |||||||||||  ||||||||||| ||||||||||||| ||||||    
T  16382529 tatatgttgatatattgtgatattgttggtgaatacatatatgtt 16382485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 39293005 - 39293049
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    |||||||||||||||||||||||| ||| |||||| || ||||||    
T  39293005 tatatgttgattgattgtgatatttttgatgaataaatatatgtt 39293049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 44306409 - 44306453
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    |||||||||||| ||||| |||||||||||| |||||| ||||||    
T  44306409 tatatgttgattaattgttatattattggtggatacatatatgtt 44306453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 2e-30; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 111 - 258
Target Start/End: Original strand, 35773456 - 35773603
Alignment:
Q  111 caaagcaattggaaagtgccaaaggcagagaatgtcaaattaattatgaaatatctcgaggtaaattacaatttgagaagatcaattataagattgttga 210  Q
    ||||| ||||||||||| |||||| ||||||||  ||||||| || ||||||||||||||||||| |||||||||| |||||||||| | ||||||||||    
T  35773456 caaagaaattggaaagttccaaagccagagaatcccaaattatttctgaaatatctcgaggtaaaatacaatttgaaaagatcaattctgagattgttga 35773555  T
Q  211 attagaacagatattaaggggtcttgttaggattagagacaaggtgaa 258  Q
     |||||||| |  ||||| |||||||||  | |||||| |||||||||    
T  35773556 gttagaacaaaagttaagtggtcttgttgagcttagagccaaggtgaa 35773603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 38376997 - 38377041
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||    
T  38376997 tatatgttgattgattatgatattgttggtgaatacatgtatgtt 38377041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 17759669 - 17759714
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgttc 46  Q
    ||||||||||||| |||||||||| ||||||||||||| |||||||    
T  17759669 tatatgttgattggttgtgatattgttggtgaatacatatatgttc 17759714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 19060989 - 19061034
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgttc 46  Q
    ||||||||||||| |||||||||| ||||||||||||| |||||||    
T  19060989 tatatgttgattggttgtgatattgttggtgaatacatatatgttc 19061034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 5229299 - 5229343
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    |||||||||||||||||||||||| | ||||||| ||| ||||||    
T  5229299 tatatgttgattgattgtgatattgtcggtgaatgcatatatgtt 5229343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 11401519 - 11401475
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    |||||||||||||||||||||||| | ||||||| ||| ||||||    
T  11401519 tatatgttgattgattgtgatattgtcggtgaatgcatatatgtt 11401475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 11401556 - 11401512
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    |||||||| |||||| |||||||| ||||||||||||| ||||||    
T  11401556 tatatgttaattgatggtgatattgttggtgaatacatatatgtt 11401512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 11516784 - 11516828
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    ||||||||||||||||| ||| || ||||||||||||| ||||||    
T  11516784 tatatgttgattgattgagatgttgttggtgaatacatatatgtt 11516828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 17392323 - 17392279
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    |||||||||||| |||||||| || ||||||||||||| ||||||    
T  17392323 tatatgttgatttattgtgatgttgttggtgaatacatatatgtt 17392279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 1e-16; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 22594793 - 22594845
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgttccttgtga 53  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  22594793 tatatgttgattgattgtgatattattggtgaatacatatatgttgcttgtga 22594845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 22594756 - 22594800
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||    
T  22594756 tatatgttgattgattgtgatattgttggtgaatacatatatgtt 22594800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 23220682 - 23220638
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||    
T  23220682 tatatgttgattgattgtgatattgttggtgaatacatatatgtt 23220638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 29161669 - 29161713
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||    
T  29161669 tatatgttgattgattgtgatattgttggtgaatacatatatgtt 29161713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 16135264 - 16135220
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    |||||||||||||| ||||||||| ||||||||||||| ||||||    
T  16135264 tatatgttgattgactgtgatattgttggtgaatacatatatgtt 16135220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 11374084 - 11374118
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaata 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  11374084 tatatgttgattgattgtgatattgttggtgaata 11374118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 17084543 - 17084577
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaata 35  Q
    |||||||||||||||||||||| ||||||||||||    
T  17084543 tatatgttgattgattgtgatactattggtgaata 17084577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 29161743 - 29161787
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    ||||||||||||| |||||||| | ||||||||||||| ||||||    
T  29161743 tatatgttgattggttgtgatactgttggtgaatacatatatgtt 29161787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 15073 - 15117
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||    
T  15073 tatatgttgattgattgtgatattgttggtgaatacatatatgtt 15117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 15036 - 15080
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    |||||||| |||||| |||||||| ||||||||||||| ||||||    
T  15036 tatatgttaattgatggtgatattgttggtgaatacatatatgtt 15080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000006; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 16000984 - 16000940
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||    
T  16000984 tatatgttgattgattgtgatattgttggtgaatacatatatgtt 16000940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 20177244 - 20177288
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||    
T  20177244 tatatgttgattgattgtgatattattgatgaatacatatatgtt 20177288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 20221971 - 20222015
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||    
T  20221971 tatatgttgattgattgtgatattattgatgaatacatatatgtt 20222015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 25756933 - 25756889
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||    
T  25756933 tatatgttgattgattgtgatatttttggtgaatacatatatgtt 25756889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 20177207 - 20177251
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    |||||||||||||||||||||||| ||||| ||||||| ||||||    
T  20177207 tatatgttgattgattgtgatattgttggtcaatacatatatgtt 20177251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 20221934 - 20221978
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    |||||||||||||||||||||||| ||||| ||||||| ||||||    
T  20221934 tatatgttgattgattgtgatattgttggtcaatacatatatgtt 20221978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 22312650 - 22312607
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgt 44  Q
    ||||||||| |||||||||||||| ||||||||||||| |||||    
T  22312650 tatatgttggttgattgtgatattgttggtgaatacatatatgt 22312607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 38
Target Start/End: Complemental strand, 24238524 - 24238489
Alignment:
Q  3 tatgttgattgattgtgatattattggtgaatacat 38  Q
    |||||||||||||||||||||| |||||||||||||    
T  24238524 tatgttgattgattgtgatattgttggtgaatacat 24238489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 19332787 - 19332828
Alignment:
Q  4 atgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    |||||||||| |||||||||| ||||||||||||| ||||||    
T  19332787 atgttgattggttgtgatattgttggtgaatacatatatgtt 19332828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 25294913 - 25294880
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaat 34  Q
    |||||||||||||||||||||||| |||||||||    
T  25294913 tatatgttgattgattgtgatatttttggtgaat 25294880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 25609001 - 25608964
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacat 38  Q
    ||||||||||||| |||||||||| |||||||||||||    
T  25609001 tatatgttgattggttgtgatattgttggtgaatacat 25608964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 11543495 - 11543451
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    ||||||||| |||||||| ||||| ||||||||||||| ||||||    
T  11543495 tatatgttggttgattgttatattgttggtgaatacatatatgtt 11543451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 19332821 - 19332865
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    ||||||||||||||||| |||||| ||||| ||||||| ||||||    
T  19332821 tatatgttgattgattgagatattgttggtaaatacatatatgtt 19332865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 19332858 - 19332902
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    ||||||||||||| |||||||||| | ||||||||||| ||||||    
T  19332858 tatatgttgattggttgtgatattgtgggtgaatacatatatgtt 19332902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 20177170 - 20177214
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    |||||||||||| ||||| |||||||||||| |||||| ||||||    
T  20177170 tatatgttgattaattgttatattattggtggatacatatatgtt 20177214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 20221897 - 20221941
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    |||||||||||| ||||| |||||||||||| |||||| ||||||    
T  20221897 tatatgttgattaattgttatattattggtggatacatatatgtt 20221941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 25294950 - 25294906
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    |||||||| |||||| |||||||| ||||||||||||| ||||||    
T  25294950 tatatgttaattgatggtgatattgttggtgaatacatatatgtt 25294906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 25756970 - 25756926
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    |||||||| |||||| |||||||| ||||||||||||| ||||||    
T  25756970 tatatgttaattgatggtgatattgttggtgaatacatatatgtt 25756926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000006; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 111 - 219
Target Start/End: Original strand, 8957791 - 8957899
Alignment:
Q  111 caaagcaattggaaagtgccaaaggcagagaatgtcaaattaattatgaaatatctcgaggtaaattacaatttgagaagatcaattataagattgttga 210  Q
    ||||||||||||||| || |||||  |||||| | ||||||||||  ||||||||| || ||||| || || |||| |||||||||| |  ||||||||     
T  8957791 caaagcaattggaaattgtcaaagtaagagaaggacaaattaattcggaaatatcttgaagtaaaatagaaattgaaaagatcaatttttcgattgttgg 8957890  T
Q  211 attagaaca 219  Q
    |||||||||    
T  8957891 attagaaca 8957899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 20455282 - 20455326
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||    
T  20455282 tatatgttgattgattgtgatattgttggtgaatacatatatgtt 20455326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 21108490 - 21108446
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||    
T  21108490 tatatgttgattgattgtgatattgttggtgaatacatatatgtt 21108446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 11964931 - 11964887
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    |||||||||||||| ||||||||| | ||||||||||| ||||||    
T  11964931 tatatgttgattgagtgtgatattgtcggtgaatacatatatgtt 11964887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 14342989 - 14343021
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaa 33  Q
    |||||||||||||||||||||||| ||||||||    
T  14342989 tatatgttgattgattgtgatattgttggtgaa 14343021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 20455319 - 20455363
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    |||||||| ||||||||||||||| ||||||||| ||| ||||||    
T  20455319 tatatgttaattgattgtgatattgttggtgaatgcatatatgtt 20455363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 21108453 - 21108409
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    |||||||||||||| ||||||||| | ||||||||||| ||||||    
T  21108453 tatatgttgattgagtgtgatattgtcggtgaatacatatatgtt 21108409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000006; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 5371883 - 5371927
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||    
T  5371883 tatatgttgattgattgtgatattgttggtgaatacatatatgtt 5371927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 17376745 - 17376787
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatg 43  Q
    |||||||||||||||||||||||| ||||||||||||| ||||    
T  17376745 tatatgttgattgattgtgatattgttggtgaatacatatatg 17376787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 19558309 - 19558269
Alignment:
Q  5 tgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    |||||||||||||||||||| ||||||||||||| ||||||    
T  19558309 tgttgattgattgtgatattgttggtgaatacatatatgtt 19558269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 54364757 - 54364801
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    |||||||||||| ||||||||||| ||||||||||||| ||||||    
T  54364757 tatatgttgatttattgtgatattgttggtgaatacatatatgtt 54364801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 5371920 - 5371964
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    |||||||| ||||||||||||||| ||||||||| ||| ||||||    
T  5371920 tatatgttaattgattgtgatattgttggtgaatgcatatatgtt 5371964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 14570237 - 14570193
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    ||||||||||||||| |||||||  ||||||||||||| ||||||    
T  14570237 tatatgttgattgatagtgatatggttggtgaatacatatatgtt 14570193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000006; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 22331626 - 22331574
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgttccttgtga 53  Q
    |||||||||||||||||||||||||||| ||||||||| | |||| |||||||    
T  22331626 tatatgttgattgattgtgatattattgatgaatacatatgtgttgcttgtga 22331574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 24562056 - 24562100
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||    
T  24562056 tatatgttgattgattgtgatattgttggtgaatacatatatgtt 24562100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 18534808 - 18534764
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    |||||||||||||||||||||||| ||| ||||||||| ||||||    
T  18534808 tatatgttgattgattgtgatattcttgatgaatacatatatgtt 18534764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 22331663 - 22331619
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    |||||||||||||||||| ||||| ||||||||||||| ||||||    
T  22331663 tatatgttgattgattgtaatattgttggtgaatacatatatgtt 22331619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 24840748 - 24840704
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    ||||||||||||||||| |||||| |||||||| |||| ||||||    
T  24840748 tatatgttgattgattgagatattgttggtgaaaacatatatgtt 24840704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 35; Significance: 0.0000000001; HSPs: 3)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 1449 - 1491
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatg 43  Q
    |||||||||||||||||||||||| ||||||||||||| ||||    
T  1449 tatatgttgattgattgtgatattgttggtgaatacatatatg 1491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 5829 - 5871
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatg 43  Q
    |||||||||||||||||||||||| ||||||||||||| ||||    
T  5829 tatatgttgattgattgtgatattgttggtgaatacatatatg 5871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 35994 - 36038
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    ||||||||||||||||| |||||| || |||||||||| ||||||    
T  35994 tatatgttgattgattgagatattgttagtgaatacatatatgtt 36038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000004; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 255662 - 255699
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacat 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  255662 tatatgttgattgattgtgatattgttggtgaatacat 255699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 255625 - 255669
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    ||||||| |||||||||||||||| ||||||||||||| ||||||    
T  255625 tatatgtggattgattgtgatatttttggtgaatacatatatgtt 255669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 255551 - 255594
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgt 44  Q
    |||||||||||||||| ||||||| ||||||||||||| |||||    
T  255551 tatatgttgattgattttgatattgttggtgaatacatatatgt 255594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1204 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1204
Description:

Target: scaffold1204; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 1445 - 1489
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    ||||||||||||| |||||||||| ||||||||||||| ||||||    
T  1445 tatatgttgattggttgtgatattgttggtgaatacatatatgtt 1489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 14152 - 14196
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    |||||||||||||||||||||||  ||||||||||||| ||||||    
T  14152 tatatgttgattgattgtgatatggttggtgaatacatatatgtt 14196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 14189 - 14233
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    ||||||||||| |||||||||||| ||||||||||||| ||||||    
T  14189 tatatgttgatcgattgtgatattgttggtgaatacatatatgtt 14233  T

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Target: chr1 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 77228 - 77264
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaataca 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  77228 tatatgttgattgattgtgatattgttggtgaataca 77264  T

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Target: chr1; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 20821936 - 20821892
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    |||||||||||||||| ||||| | ||||||||||||| ||||||    
T  20821936 tatatgttgattgattatgataatgttggtgaatacatatatgtt 20821892  T

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Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 20821973 - 20821929
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    |||||||||||||||||||||||  ||||||| ||||| ||||||    
T  20821973 tatatgttgattgattgtgatatggttggtgagtacatatatgtt 20821929  T

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Target: scaffold0183 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 45
Target Start/End: Complemental strand, 9754 - 9711
Alignment:
Q  2 atatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    ||||||||||||||||||||||| ||||| ||||||| ||||||    
T  9754 atatgttgattgattgtgatattgttggtcaatacatatatgtt 9711  T

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Target: scaffold0174 (Bit Score: 29; Significance: 0.0000004; HSPs: 3)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 21272 - 21316
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    |||||||||||||||||||||||| || || ||||||| ||||||    
T  21272 tatatgttgattgattgtgatattgttagtaaatacatatatgtt 21316  T

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Target: scaffold0174; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 21309 - 21353
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    |||||||||||||||||||||||| ||| ||| ||||| ||||||    
T  21309 tatatgttgattgattgtgatattgttgatgagtacatatatgtt 21353  T

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Target: scaffold0174; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 21346 - 21390
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    ||||||||||||||||| |||||| ||||||| ||||| ||||||    
T  21346 tatatgttgattgattgcgatattgttggtgagtacatatatgtt 21390  T

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Target: scaffold0005 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 247139 - 247183
Alignment:
Q  1 tatatgttgattgattgtgatattattggtgaatacatgtatgtt 45  Q
    ||||||||||||||| |||||||  ||||||||||||| ||||||    
T  247139 tatatgttgattgatagtgatatggttggtgaatacatatatgtt 247183  T

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