View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19395_high_13 (Length: 308)

Name: NF19395_high_13
Description: NF19395
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19395_high_13
NF19395_high_13
[»] chr5 (11 HSPs)
chr5 (9-308)||(22750950-22751249)
chr5 (57-300)||(38144532-38144773)
chr5 (65-300)||(28370058-28370291)
chr5 (65-300)||(19512204-19512438)
chr5 (52-271)||(23528478-23528695)
chr5 (65-126)||(18407947-18408008)
chr5 (65-126)||(23111203-23111264)
chr5 (65-117)||(22438751-22438803)
chr5 (65-116)||(19236900-19236951)
chr5 (65-114)||(22461158-22461207)
chr5 (65-114)||(22467782-22467831)
[»] chr7 (24 HSPs)
chr7 (9-308)||(18873169-18873468)
chr7 (65-308)||(15167984-15168227)
chr7 (66-308)||(10895795-10896037)
chr7 (58-300)||(14422802-14423043)
chr7 (57-308)||(12709839-12710090)
chr7 (57-308)||(13122910-13123161)
chr7 (65-300)||(16009395-16009628)
chr7 (57-301)||(13743526-13743768)
chr7 (57-271)||(12590639-12590851)
chr7 (57-175)||(13007374-13007491)
chr7 (65-230)||(16677180-16677347)
chr7 (65-230)||(17651416-17651583)
chr7 (65-117)||(11382874-11382926)
chr7 (65-117)||(11389351-11389403)
chr7 (65-117)||(20311055-20311107)
chr7 (65-117)||(21230963-21231015)
chr7 (65-125)||(13679485-13679545)
chr7 (65-116)||(2971254-2971305)
chr7 (65-116)||(11311059-11311110)
chr7 (65-116)||(20906465-20906516)
chr7 (67-118)||(46625961-46626012)
chr7 (57-97)||(831629-831669)
chr7 (57-97)||(1196809-1196849)
chr7 (57-97)||(34958578-34958618)
[»] scaffold0026 (2 HSPs)
scaffold0026 (57-308)||(11846-12097)
scaffold0026 (65-300)||(111504-111737)
[»] chr3 (22 HSPs)
chr3 (65-308)||(14762761-14763004)
chr3 (65-308)||(38310803-38311046)
chr3 (65-294)||(20247792-20248021)
chr3 (65-300)||(9534146-9534379)
chr3 (65-301)||(24192771-24193008)
chr3 (65-300)||(23370509-23370743)
chr3 (65-297)||(55499105-55499337)
chr3 (65-175)||(24933832-24933941)
chr3 (57-143)||(41455093-41455178)
chr3 (57-201)||(16801463-16801606)
chr3 (65-123)||(18929239-18929297)
chr3 (65-126)||(17240516-17240577)
chr3 (65-116)||(13302244-13302295)
chr3 (65-116)||(13323791-13323842)
chr3 (65-116)||(12033448-12033499)
chr3 (65-116)||(13312900-13312951)
chr3 (65-116)||(17131732-17131783)
chr3 (65-116)||(51301589-51301640)
chr3 (65-175)||(10389447-10389557)
chr3 (65-175)||(10414536-10414646)
chr3 (65-175)||(10421206-10421316)
chr3 (65-118)||(16801027-16801080)
[»] scaffold1773 (1 HSPs)
scaffold1773 (57-308)||(988-1237)
[»] scaffold0006 (1 HSPs)
scaffold0006 (57-308)||(49989-50238)
[»] chr6 (24 HSPs)
chr6 (65-295)||(23057760-23057990)
chr6 (57-308)||(29614142-29614393)
chr6 (65-300)||(23839016-23839250)
chr6 (65-300)||(10986184-10986418)
chr6 (57-300)||(18800255-18800497)
chr6 (65-297)||(4477678-4477909)
chr6 (57-194)||(930091-930227)
chr6 (65-300)||(21565215-21565449)
chr6 (57-175)||(12168305-12168422)
chr6 (57-175)||(19287214-19287331)
chr6 (57-175)||(19785865-19785982)
chr6 (57-175)||(19878398-19878515)
chr6 (57-175)||(19884174-19884291)
chr6 (65-144)||(34639990-34640069)
chr6 (65-144)||(34646664-34646743)
chr6 (65-175)||(25469708-25469816)
chr6 (69-117)||(24512851-24512899)
chr6 (65-114)||(9187498-9187547)
chr6 (65-118)||(25348486-25348539)
chr6 (65-118)||(25598643-25598696)
chr6 (65-118)||(25397172-25397225)
chr6 (65-118)||(2286770-2286823)
chr6 (65-118)||(19471338-19471391)
chr6 (65-126)||(31252413-31252474)
[»] scaffold0029 (1 HSPs)
scaffold0029 (57-281)||(111717-111942)
[»] chr4 (12 HSPs)
chr4 (57-308)||(8045828-8046078)
chr4 (57-308)||(11847916-11848173)
chr4 (65-175)||(53483646-53483756)
chr4 (65-117)||(15408139-15408191)
chr4 (65-118)||(8834895-8834948)
chr4 (65-118)||(13888641-13888694)
chr4 (65-116)||(14486661-14486712)
chr4 (67-118)||(22724691-22724742)
chr4 (65-118)||(15245215-15245268)
chr4 (67-118)||(15308120-15308171)
chr4 (67-116)||(27906266-27906315)
chr4 (57-97)||(15747552-15747592)
[»] scaffold0924 (1 HSPs)
scaffold0924 (57-308)||(746-997)
[»] scaffold0117 (2 HSPs)
scaffold0117 (57-308)||(1893-2143)
scaffold0117 (57-308)||(8570-8820)
[»] scaffold0025 (1 HSPs)
scaffold0025 (65-301)||(14399-14635)
[»] chr8 (14 HSPs)
chr8 (65-300)||(44477441-44477674)
chr8 (65-300)||(44492599-44492832)
chr8 (65-308)||(8727736-8727979)
chr8 (57-308)||(23866423-23866674)
chr8 (153-300)||(27940946-27941091)
chr8 (65-175)||(17054533-17054642)
chr8 (7-118)||(18614271-18614382)
chr8 (65-126)||(23482056-23482117)
chr8 (65-118)||(39364919-39364972)
chr8 (65-116)||(29643389-29643440)
chr8 (65-117)||(14056567-14056619)
chr8 (65-117)||(25111976-25112028)
chr8 (65-116)||(24320674-24320725)
chr8 (65-118)||(21931696-21931749)
[»] chr2 (15 HSPs)
chr2 (65-300)||(19661457-19661690)
chr2 (65-300)||(6483536-6483769)
chr2 (65-300)||(6487003-6487236)
chr2 (57-230)||(26583715-26583886)
chr2 (65-300)||(23878826-23879059)
chr2 (65-300)||(23089058-23089292)
chr2 (65-300)||(23101466-23101700)
chr2 (65-175)||(5706027-5706137)
chr2 (65-126)||(23265133-23265194)
chr2 (65-126)||(23280201-23280262)
chr2 (65-123)||(21908353-21908411)
chr2 (65-118)||(24661576-24661629)
chr2 (65-116)||(10577-10628)
chr2 (65-116)||(25180933-25180984)
chr2 (65-165)||(26885133-26885233)
[»] chr1 (12 HSPs)
chr1 (65-300)||(20437027-20437261)
chr1 (57-175)||(41111977-41112094)
chr1 (7-126)||(32651563-32651682)
chr1 (65-126)||(18712790-18712851)
chr1 (65-117)||(19663520-19663572)
chr1 (65-118)||(10811786-10811839)
chr1 (65-118)||(20805320-20805373)
chr1 (65-117)||(11158093-11158145)
chr1 (65-116)||(20851136-20851187)
chr1 (65-116)||(20857763-20857814)
chr1 (65-116)||(21706276-21706327)
chr1 (65-116)||(21710818-21710869)
[»] scaffold0553 (1 HSPs)
scaffold0553 (65-300)||(10199-10433)
[»] scaffold0544 (1 HSPs)
scaffold0544 (65-300)||(1529-1763)
[»] scaffold0247 (1 HSPs)
scaffold0247 (57-300)||(11159-11401)
[»] scaffold0058 (1 HSPs)
scaffold0058 (57-301)||(109-350)
[»] scaffold0090 (1 HSPs)
scaffold0090 (57-301)||(17985-18229)
[»] scaffold0456 (4 HSPs)
scaffold0456 (9-144)||(904-1039)
scaffold0456 (9-144)||(8049-8184)
scaffold0456 (207-301)||(806-899)
scaffold0456 (207-301)||(7951-8044)
[»] scaffold0476 (1 HSPs)
scaffold0476 (65-300)||(3296-3531)
[»] scaffold0154 (1 HSPs)
scaffold0154 (57-201)||(30772-30917)
[»] scaffold0077 (1 HSPs)
scaffold0077 (65-300)||(3625-3859)
[»] scaffold0634 (1 HSPs)
scaffold0634 (221-308)||(3471-3558)
[»] scaffold0796 (2 HSPs)
scaffold0796 (57-175)||(1728-1845)
scaffold0796 (57-175)||(5751-5868)
[»] scaffold0004 (1 HSPs)
scaffold0004 (15-126)||(116887-116998)
[»] scaffold0129 (1 HSPs)
scaffold0129 (65-173)||(45278-45386)
[»] scaffold0222 (1 HSPs)
scaffold0222 (65-126)||(16811-16872)
[»] scaffold0461 (1 HSPs)
scaffold0461 (65-126)||(11-72)
[»] scaffold0146 (1 HSPs)
scaffold0146 (65-126)||(13623-13684)
[»] scaffold0020 (1 HSPs)
scaffold0020 (65-126)||(101931-101992)
[»] scaffold0310 (1 HSPs)
scaffold0310 (65-117)||(17643-17695)
[»] scaffold0107 (1 HSPs)
scaffold0107 (65-117)||(40535-40587)
[»] scaffold0019 (1 HSPs)
scaffold0019 (65-117)||(135473-135525)
[»] scaffold0235 (1 HSPs)
scaffold0235 (65-115)||(22596-22646)
[»] scaffold0124 (1 HSPs)
scaffold0124 (65-117)||(34279-34331)
[»] scaffold0138 (1 HSPs)
scaffold0138 (65-118)||(12296-12349)
[»] scaffold0317 (1 HSPs)
scaffold0317 (65-125)||(1378-1438)
[»] scaffold0139 (1 HSPs)
scaffold0139 (65-117)||(15000-15052)
[»] scaffold0096 (1 HSPs)
scaffold0096 (65-118)||(39510-39563)
[»] scaffold0815 (1 HSPs)
scaffold0815 (65-113)||(1453-1501)
[»] scaffold1318 (1 HSPs)
scaffold1318 (65-116)||(1916-1967)
[»] scaffold0348 (1 HSPs)
scaffold0348 (65-116)||(9336-9387)
[»] scaffold0127 (1 HSPs)
scaffold0127 (65-116)||(10239-10290)
[»] scaffold0023 (1 HSPs)
scaffold0023 (65-116)||(135438-135489)
[»] scaffold0001 (1 HSPs)
scaffold0001 (65-116)||(493032-493082)
[»] scaffold2054 (1 HSPs)
scaffold2054 (57-150)||(680-774)
[»] scaffold0609 (1 HSPs)
scaffold0609 (65-126)||(5861-5922)
[»] scaffold0335 (1 HSPs)
scaffold0335 (65-118)||(2631-2684)


Alignment Details
Target: chr5 (Bit Score: 248; Significance: 1e-138; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 9 - 308
Target Start/End: Complemental strand, 22751249 - 22750950
Alignment:
Q  9 gagatgaacaagtatagtcagagaatctggtcgttgtgcgtttcttctaaaactatggtaagggtgagactatctctcaataatcataatctataatttc 108  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||||||    
T  22751249 gagaagaacaagtatagtcagagaatccggtcgttgtgcgtttcttctaaaactaaggtaagggtgagactttctctcgataatcataatctataatttc 22751150  T
Q  109 tgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattccctt 208  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||| |||    
T  22751149 tgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctctt 22751050  T
Q  209 gtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaattgattgaaatttatgaatgattggatgaattgatgaatttgtgta 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  22751049 gtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgta 22750950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 57 - 300
Target Start/End: Original strand, 38144532 - 38144773
Alignment:
Q  57 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 156  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  38144532 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttag 38144631  T
Q  157 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 256  Q
    ||||| ||||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||| |||||||||||||||||| |  || || ||||||    
T  38144632 ggtttgatgatgattctgaggggaa-tgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgat 38144730  T
Q  257 cataaattgattgaaatttatgaatgattggatgaattgatgaa 300  Q
    |||||||||||||||| ||| || ||||||||||||||||||||    
T  38144731 cataaattgattgaaa-ttacgattgattggatgaattgatgaa 38144773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 65 - 300
Target Start/End: Original strand, 28370058 - 28370291
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  28370058 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtttgat 28370157  T
Q  165 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaatt 264  Q
    ||||||| ||| ||||| |||||| ||||| |||||||||  ||||||  ||||||| |||||||||||||||||| |  || || ||||||||||||||    
T  28370158 gatgattttgaggggaa-tgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataaatt 28370256  T
Q  265 gattgaaatttatgaatgattggatgaattgatgaa 300  Q
    |||||||| |||||| |||| |||||||||||||||    
T  28370257 gattgaaa-ttatgattgatgggatgaattgatgaa 28370291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 65 - 300
Target Start/End: Complemental strand, 19512438 - 19512204
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttagggtttaa 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||| |    
T  19512438 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttga 19512339  T
Q  164 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaat 263  Q
    |||||||| ||| ||||| |||||| ||||| |||||||||  ||||||  ||||||| |||||||||||||||||| |  || || |||||||||||||    
T  19512338 tgatgattttgaggggaa-tgggtattgatcatgttaattctattgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataaat 19512240  T
Q  264 tgattgaaatttatgaatgattggatgaattgatgaa 300  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  19512239 tgattgaaa-ttatgattgattggatgaattgatgaa 19512204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 52 - 271
Target Start/End: Complemental strand, 23528695 - 23528478
Alignment:
Q  52 cttctaaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagg 151  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||      
T  23528695 cttctaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaa 23528597  T
Q  152 gttagggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgct 251  Q
    |||||||||| ||||||||||||| ||  | || |||| |||  ||||| ||  |||| ||| ||||||| |||| |||| |||||||  ||||| ||||    
T  23528596 gttagggtttgatgatgattctgatgg--aatgagtaaggatgatgttagttttcttggaatttaatgttaagaacgaaatcttaatccatgttgttgct 23528499  T
Q  252 gtgat-cataaattgattgaa 271  Q
    || || ||| |||||||||||    
T  23528498 gtaatccatgaattgattgaa 23528478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 65 - 126
Target Start/End: Original strand, 18407947 - 18408008
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 126  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  18407947 ggtaagggtgagactatctctcaataatcataatatataatttctgaaaattgatctaattg 18408008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 65 - 126
Target Start/End: Original strand, 23111203 - 23111264
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 126  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  23111203 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23111264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 22438751 - 22438803
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 117  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22438751 ggtaagggtgagactatctctcaataatcataatgtataatttctgaaaattg 22438803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 65 - 116
Target Start/End: Complemental strand, 19236951 - 19236900
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  19236951 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 19236900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 114
Target Start/End: Complemental strand, 22461207 - 22461158
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 114  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||    
T  22461207 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 22461158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 114
Target Start/End: Complemental strand, 22467831 - 22467782
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 114  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||    
T  22467831 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 22467782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 244; Significance: 1e-135; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 9 - 308
Target Start/End: Complemental strand, 18873468 - 18873169
Alignment:
Q  9 gagatgaacaagtatagtcagagaatctggtcgttgtgcgtttcttctaaaactatggtaagggtgagactatctctcaataatcataatctataatttc 108  Q
    |||| |||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||||||    
T  18873468 gagaagaacaagtatagtcagagaatccggccgttgtgcgtttcttctaaaactaaggtaagggtgagactttctctcgataatcataatctataatttc 18873369  T
Q  109 tgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattccctt 208  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||| |||    
T  18873368 tgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctctt 18873269  T
Q  209 gtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaattgattgaaatttatgaatgattggatgaattgatgaatttgtgta 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  18873268 gtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgta 18873169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 65 - 308
Target Start/End: Complemental strand, 15168227 - 15167984
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 164  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||    
T  15168227 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttgat 15168128  T
Q  165 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaatt 264  Q
    ||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15168127 gatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaatt 15168028  T
Q  265 gattgaaatttatgaatgattggatgaattgatgaatttgtgta 308  Q
    |||||||| |||||| ||||||||||||||||||||||||||||    
T  15168027 gattgaaaattatgagtgattggatgaattgatgaatttgtgta 15167984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 66 - 308
Target Start/End: Original strand, 10895795 - 10896037
Alignment:
Q  66 gtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagtttt-ggaaaataaattgagggttagggtttaat 164  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||| |||||||| |||||||||||| ||    
T  10895795 gtaagggtgagactatctctcaataatcataatctataatttttgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtttgat 10895894  T
Q  165 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaatt 264  Q
    ||||||||||| |||||| ||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10895895 gatgattctgaggggaat-gggtattgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaatt 10895993  T
Q  265 gattgaaatttatgaatgattggatgaattgatgaatttgtgta 308  Q
    |||||||| |||||| ||||||||||||||||||||||||||||    
T  10895994 gattgaaaattatgagtgattggatgaattgatgaatttgtgta 10896037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 58 - 300
Target Start/End: Complemental strand, 14423043 - 14422802
Alignment:
Q  58 aaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttag 156  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||    
T  14423043 aaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttag 14422944  T
Q  157 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 256  Q
    ||||| ||||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||| |||||||||||||||||| | ||| || ||||||    
T  14422943 ggtttgatgatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgttgtgat 14422845  T
Q  257 cataaattgattgaaatttatgaatgattggatgaattgatgaa 300  Q
    |||||||||||||||| |||||| ||||||||||||||||||||    
T  14422844 cataaattgattgaaa-ttatgattgattggatgaattgatgaa 14422802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 57 - 308
Target Start/End: Original strand, 12709839 - 12710090
Alignment:
Q  57 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 156  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  12709839 aaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 12709937  T
Q  157 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattc-ccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 255  Q
    ||||| ||||||||| ||||| ||| |||||||||||| |||||||||   |||||||||||||||||||||  |||||||||| |||||| ||||||||    
T  12709938 ggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatc-ttgttgttgctgtga 12710036  T
Q  256 tcataaattga-ttgaaatttatgaatgattggatgaattgatgaatttgtgta 308  Q
    || |||| ||| ||| ||||||||| ||||||||||||||||||||||||||||    
T  12710037 tcgtaaactgatttggaatttatgagtgattggatgaattgatgaatttgtgta 12710090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 57 - 308
Target Start/End: Original strand, 13122910 - 13123161
Alignment:
Q  57 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 156  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  13122910 aaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 13123008  T
Q  157 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattc-ccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 255  Q
    ||||| ||||||||| ||||| ||| |||||||||||| |||||||||   |||||||||||||||||||||  |||||||||| |||||| ||||||||    
T  13123009 ggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatc-ttgttgttgctgtga 13123107  T
Q  256 tcataaattga-ttgaaatttatgaatgattggatgaattgatgaatttgtgta 308  Q
    || |||| ||| ||| ||||||||| ||||||||||||||||||||||||||||    
T  13123108 tcgtaaactgatttggaatttatgagtgattggatgaattgatgaatttgtgta 13123161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 65 - 300
Target Start/End: Complemental strand, 16009628 - 16009395
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||| |||||| ||||| ||    
T  16009628 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatggttttggaagataaattgtgggttaaggtttgat 16009529  T
Q  165 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaatt 264  Q
    ||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||| |||||||||||||||||| |  || || |||||||||||| |    
T  16009528 gatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataaact 16009430  T
Q  265 gattgaaatttatgaatgattggatgaattgatgaa 300  Q
    |||||||| |||||| ||||||||||||||||||||    
T  16009429 gattgaaa-ttatgattgattggatgaattgatgaa 16009395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 57 - 301
Target Start/End: Complemental strand, 13743768 - 13743526
Alignment:
Q  57 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 156  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  13743768 aaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 13743670  T
Q  157 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 256  Q
    ||||| ||||||||| ||||| ||| |||||||||||| ||||||||  |||||| |||  |||||||| |||| ||||||||| ||||  |||||||||    
T  13743669 ggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattttcttgtattatgctgttcagattgaagacttaatctatgttattgctgtgat 13743570  T
Q  257 cataaattgattgaaatttatgaatgattggatgaattgatgaat 301  Q
    ||||||||| |||||| |||||  || |||||| |||||||||||    
T  13743569 cataaattggttgaaa-ttatgcttggttggataaattgatgaat 13743526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 57 - 271
Target Start/End: Original strand, 12590639 - 12590851
Alignment:
Q  57 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 156  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||  |||||    
T  12590639 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataatatgaaagttag 12590737  T
Q  157 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 256  Q
    ||||| ||||||||||||| ||  | || |||| |||  ||||| ||  |||| ||| ||||||| ||||||||| |||||||  ||||| |||||| ||    
T  12590738 ggtttgatgatgattctgatgg--aatgagtaaagatgatgttagttttcttggaatttaatgttaagaatgaaagcttaatccatgttgttgctgtaat 12590835  T
Q  257 -cataaattgattgaa 271  Q
     ||| |||||||||||    
T  12590836 ccattaattgattgaa 12590851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 57 - 175
Target Start/End: Complemental strand, 13007491 - 13007374
Alignment:
Q  57 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 156  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||  |||||    
T  13007491 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttag 13007393  T
Q  157 ggtttaatgatgattctga 175  Q
    ||||| |||||||||||||    
T  13007392 ggtttgatgatgattctga 13007374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 65 - 230
Target Start/End: Complemental strand, 16677347 - 16677180
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaat-aaattgagggttagggttta 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||| || ||||| |||||||||||||     
T  16677347 ggtaagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaaattaagggttagggtttg 16677248  T
Q  163 atgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaa 230  Q
    ||||||||| ||| | | || | ||||||||| |||||| |   ||||||  | ||||||||||||||    
T  16677247 atgatgattttgaggaggatggtgtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaa 16677180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 65 - 230
Target Start/End: Complemental strand, 17651583 - 17651416
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaat-aaattgagggttagggttta 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||| || ||||| |||||||||||||     
T  17651583 ggtaagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaaattaagggttagggtttg 17651484  T
Q  163 atgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaa 230  Q
    ||||||||| ||| | | || | ||||||||| |||||| |   ||||||  | ||||||||||||||    
T  17651483 atgatgattttgaggaggatggtgtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaa 17651416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 11382874 - 11382926
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 117  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11382874 ggtaagggtgagactatctctcaataatcataatatataatttctgaaaattg 11382926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 11389351 - 11389403
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 117  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11389351 ggtaagggtgagactatctctcaataatcataatatataatttctgaaaattg 11389403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 20311055 - 20311107
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 117  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  20311055 ggtaagggtgagactatctctcaataatcataacgtataatttctgaaaattg 20311107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 21230963 - 21231015
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 117  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  21230963 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 21231015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 13679545 - 13679485
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaatt 125  Q
    ||||||||||||||||||| ||||| ||||| || |||||||| |||||||||| ||||||    
T  13679545 ggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaattgatctaatt 13679485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 65 - 116
Target Start/End: Complemental strand, 2971305 - 2971254
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  2971305 ggtaagggtgggattatctttcaatagtcataatttataatttctgaaaatt 2971254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 65 - 116
Target Start/End: Complemental strand, 11311110 - 11311059
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    |||||||||||||||||||||||||||| ||| | || ||||||| ||||||    
T  11311110 ggtaagggtgagactatctctcaataataatagtgtagaatttctaaaaatt 11311059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 65 - 116
Target Start/End: Original strand, 20906465 - 20906516
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  20906465 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20906516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 67 - 118
Target Start/End: Complemental strand, 46626012 - 46625961
Alignment:
Q  67 taagggtgagactatctctcaataatcataatctataatttctgaaaattga 118  Q
    |||||||||||||| |||||||| || ||||| ||||||||| |||||||||    
T  46626012 taagggtgagactaactctcaatgattataatatataatttcggaaaattga 46625961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 97
Target Start/End: Original strand, 831629 - 831669
Alignment:
Q  57 aaaactatggtaagggtgagactatctctcaataatcataa 97  Q
    ||||||| |||||||||||||||| ||||||||||| ||||    
T  831629 aaaactaaggtaagggtgagactaactctcaataattataa 831669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 97
Target Start/End: Original strand, 1196809 - 1196849
Alignment:
Q  57 aaaactatggtaagggtgagactatctctcaataatcataa 97  Q
    ||||||| |||||||||||||||| ||||||||||| ||||    
T  1196809 aaaactaaggtaagggtgagactaactctcaataattataa 1196849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 97
Target Start/End: Complemental strand, 34958618 - 34958578
Alignment:
Q  57 aaaactatggtaagggtgagactatctctcaataatcataa 97  Q
    ||||||| |||||||||||||||| ||||||||||| ||||    
T  34958618 aaaactaaggtaagggtgagactaactctcaataattataa 34958578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 208; Significance: 1e-114; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 57 - 308
Target Start/End: Original strand, 11846 - 12097
Alignment:
Q  57 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 156  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  11846 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagagttag 11945  T
Q  157 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 256  Q
    ||||| ||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  11946 ggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatcttcagaatgaaaacttaatctttgttgttgctgtgat 12045  T
Q  257 cataaattgattgaaatttatgaatgattggatgaattgatgaatttgtgta 308  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  12046 cataagttgattgaaatttatgagtgattggatgaattgatgaatttgtgta 12097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 65 - 300
Target Start/End: Complemental strand, 111737 - 111504
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  111737 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtttgat 111638  T
Q  165 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaatt 264  Q
    ||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||| |||||||||||||||||| |  || || ||||||||||||||    
T  111637 gatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataaatt 111539  T
Q  265 gattgaaatttatgaatgattggatgaattgatgaa 300  Q
    |||||||| |||||| ||||||||||||||||||||    
T  111538 gattgaaa-ttatgattgattggatgaattgatgaa 111504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 208; Significance: 1e-114; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 65 - 308
Target Start/End: Original strand, 14762761 - 14763004
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 164  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||    
T  14762761 ggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttgat 14762860  T
Q  165 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaatt 264  Q
    ||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14762861 gatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaatt 14762960  T
Q  265 gattgaaatttatgaatgattggatgaattgatgaatttgtgta 308  Q
    |||||||| |||||| ||||||||||||||||||||||||||||    
T  14762961 gattgaaaattatgagtgattggatgaattgatgaatttgtgta 14763004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 65 - 308
Target Start/End: Original strand, 38310803 - 38311046
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 164  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||| ||    
T  38310803 ggtaagggtgagactatctctcgataatcataatctataatttctgaatattgacctaattgcatagttttggaagataaattgagggttagggtttgat 38310902  T
Q  165 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaatt 264  Q
    ||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38310903 gatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaatt 38311002  T
Q  265 gattgaaatttatgaatgattggatgaattgatgaatttgtgta 308  Q
    |||||||| |||||| ||||||||||||| ||||||||||||||    
T  38311003 gattgaaaattatgagtgattggatgaatggatgaatttgtgta 38311046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 65 - 294
Target Start/End: Original strand, 20247792 - 20248021
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||    
T  20247792 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttgat 20247891  T
Q  165 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaatt 264  Q
    ||||||||||||||||| |||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20247892 gatgattctgaagggaaatgggtaatgatcatgttaattttcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaatt 20247991  T
Q  265 gattgaaatttatgaatgattggatgaatt 294  Q
    |||||||| |||||| ||||||||||||||    
T  20247992 gattgaaaattatgagtgattggatgaatt 20248021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 65 - 300
Target Start/End: Complemental strand, 9534379 - 9534146
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  9534379 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtttgat 9534280  T
Q  165 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaatt 264  Q
    |||||||||||  |||| |||||| ||||| |||||||||  ||||||| ||||||| |||||||||||||||||| |  || ||  |||||||||||||    
T  9534279 gatgattctgagtggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgtcgtgatcataaatt 9534181  T
Q  265 gattgaaatttatgaatgattggatgaattgatgaa 300  Q
    |||||||| |||||| ||||||||||||||||||||    
T  9534180 gattgaaa-ttatgattgattggatgaattgatgaa 9534146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 65 - 301
Target Start/End: Complemental strand, 24193008 - 24192771
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagtttt-ggaaaataaattgagggttagggtttaa 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||| |    
T  24193008 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttga 24192909  T
Q  164 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtg-atcataaa 262  Q
    |||||||||||||||||| |||||||||||| |||||||||  ||||||| | |||||||||||||||||||||||| || || ||||||| ||||||||    
T  24192908 tgatgattctgaagggaaatgggtaatgatcatgttaattctgttgtaatgtgatgttcagaatgaaaacttaatctatgctgttgctgtgaatcataaa 24192809  T
Q  263 ttgattgaaatttatgaatgattggatgaattgatgaat 301  Q
     |||||||||  ||||| ||||||||| |||||||||||    
T  24192808 ctgattgaaa-atatgattgattggataaattgatgaat 24192771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 65 - 300
Target Start/End: Original strand, 23370509 - 23370743
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttagggtttaa 163  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||| |||||||||||| |    
T  23370509 ggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtttga 23370608  T
Q  164 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaat 263  Q
    |||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||| |||||||||||||||||| |  || || |||||||||||||    
T  23370609 tgatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataaat 23370707  T
Q  264 tgattgaaatttatgaatgattggatgaattgatgaa 300  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  23370708 tgattgaaa-ttatgattgattggatgaattgatgaa 23370743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 65 - 297
Target Start/End: Original strand, 55499105 - 55499337
Alignment:
Q  65 ggtaagggtgagactatctctcaataatc-ataatctataatttctg-aaaattgacctaattgcttagttttggaaaataaattgagggttagggttta 162  Q
    ||||||||||||||||||||||| ||||  ||||| | ||||||| | ||||||||||||| ||||||   |||   |  |||||||||||||||||||     
T  55499105 ggtaagggtgagactatctctcattaatagataatatgtaatttcgggaaaattgacctaactgcttaaccttgaggataaaattgagggttagggtttg 55499204  T
Q  163 atgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaa 262  Q
    ||||||||||||| ||||| |||||||||||| ||||||||   ||||||| | |||||| |||||||| |||||||| |   | |||||||||||||||    
T  55499205 atgatgattctgaggggaa-tgggtaatgatcatgttaattatgttgtaatgtgatgttcggaatgaaatcttaatctatacagttgctgtgatcataaa 55499303  T
Q  263 ttgattgaaatttatgaatgattggatgaattgat 297  Q
    ||||||||||  ||| | |||||||||||||||||    
T  55499304 ttgattgaaa-atataattgattggatgaattgat 55499337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 24933832 - 24933941
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 164  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||   ||||||||| ||    
T  24933832 ggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataatatgaaaattagggtttgat 24933930  T
Q  165 gatgattctga 175  Q
    |||||||||||    
T  24933931 gatgattctga 24933941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 57 - 143
Target Start/End: Original strand, 41455093 - 41455178
Alignment:
Q  57 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaata 143  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||    
T  41455093 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaata 41455178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 57 - 201
Target Start/End: Original strand, 16801463 - 16801606
Alignment:
Q  57 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaat-aaattgagggtta 155  Q
    ||||||| ||||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||| ||| ||| || ||||||| |||||    
T  16801463 aaaactaaggtaagggtgagactatctctcaataatcat-atatataatttctgaaaattgacctgattgcttagcttttgaagataaaattgaaggtta 16801561  T
Q  156 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaa 201  Q
    ||| || ||||||||| ||| | |||| | ||||||||| ||||||    
T  16801562 ggg-ttgatgatgattttgaggagaatggtgtaatgatcatgttaa 16801606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 18929297 - 18929239
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaa 123  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||    
T  18929297 ggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatctaa 18929239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 65 - 126
Target Start/End: Original strand, 17240516 - 17240577
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 126  Q
    ||||||||||||||||||||||||||||| ||||  |||||||||||||||||| |||||||    
T  17240516 ggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 17240577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 116
Target Start/End: Original strand, 13302244 - 13302295
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    ||||||||||||| ||||| |||||||||||||| | |||||||||||||||    
T  13302244 ggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 13302295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 116
Target Start/End: Original strand, 13323791 - 13323842
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    ||||||||||||| ||||| |||||||||||||| | |||||||||||||||    
T  13323791 ggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 13323842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 65 - 116
Target Start/End: Original strand, 12033448 - 12033499
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  12033448 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 12033499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 65 - 116
Target Start/End: Original strand, 13312900 - 13312951
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    ||||||||||||| ||||| |||||||||||||| | |||||| ||||||||    
T  13312900 ggtaagggtgagattatctttcaataatcataatatgtaatttttgaaaatt 13312951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 65 - 116
Target Start/End: Complemental strand, 17131783 - 17131732
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  17131783 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 17131732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 65 - 116
Target Start/End: Complemental strand, 51301640 - 51301589
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    ||||||||||||| |||||  ||||||||||||| | |||||||||||||||    
T  51301640 ggtaagggtgagattatcttccaataatcataatatgtaatttctgaaaatt 51301589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 10389447 - 10389557
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 164  Q
    |||||||||| || ||||| ||||| || ||||| ||||||||||||||| | | |||||||  |||||||  | |||||  |||   ||||||||| ||    
T  10389447 ggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggtttgat 10389546  T
Q  165 gatgattctga 175  Q
    |||||||||||    
T  10389547 gatgattctga 10389557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 10414536 - 10414646
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 164  Q
    |||||||||| || ||||| ||||| || ||||| ||||||||||||||| | | |||||||  |||||||  | |||||  |||   ||||||||| ||    
T  10414536 ggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggtttgat 10414635  T
Q  165 gatgattctga 175  Q
    |||||||||||    
T  10414636 gatgattctga 10414646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 10421206 - 10421316
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 164  Q
    |||||||||| || ||||| ||||| || ||||| ||||||||||||||| | | |||||||  |||||||  | |||||  |||   ||||||||| ||    
T  10421206 ggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggtttgat 10421305  T
Q  165 gatgattctga 175  Q
    |||||||||||    
T  10421306 gatgattctga 10421316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 16801080 - 16801027
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 118  Q
    |||||||||||||||| |||||||| ||  |||| ||||| |||||||||||||    
T  16801080 ggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 16801027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 57 - 308
Target Start/End: Complemental strand, 1237 - 988
Alignment:
Q  57 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 156  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  1237 aaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 1139  T
Q  157 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 256  Q
    ||||| |||| |||| ||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  1138 ggtttgatgaggattatgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatc-ttgttgttgctgtgat 1040  T
Q  257 cataaattgattgaaatttatgaatgattggatgaattgatgaatttgtgta 308  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  1039 cataaattgattgaaatttatgagtgattggatgaattgatgaatttgtgta 988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 57 - 308
Target Start/End: Complemental strand, 50238 - 49989
Alignment:
Q  57 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 156  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  50238 aaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 50140  T
Q  157 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 256  Q
    ||||| |||| |||| ||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  50139 ggtttgatgaggattatgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatc-ttgttgttgctgtgat 50041  T
Q  257 cataaattgattgaaatttatgaatgattggatgaattgatgaatttgtgta 308  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  50040 cataaattgattgaaatttatgagtgattggatgaattgatgaatttgtgta 49989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 191; Significance: 1e-104; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 65 - 295
Target Start/End: Complemental strand, 23057990 - 23057760
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 164  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||    
T  23057990 ggtaagggtgagactatctctcgataatcataatctataattcctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttgat 23057891  T
Q  165 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaatt 264  Q
    ||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23057890 gatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaatt 23057791  T
Q  265 gattgaaatttatgaatgattggatgaattg 295  Q
    |||||||| |||||| |||||||||||||||    
T  23057790 gattgaaaattatgagtgattggatgaattg 23057760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 57 - 308
Target Start/End: Original strand, 29614142 - 29614393
Alignment:
Q  57 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaa-taaattgagggtta 155  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||||||||| ||||||||||||||    
T  29614142 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctagttgcataattttggaaaaataaattgagggtta 29614241  T
Q  156 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 255  Q
    |||||| ||||||||| ||||||||| |||||||||||| ||||||||| |||||| |  |||||| |||||||||||||||||||||||| ||||||||    
T  29614242 gggtttgatgatgattatgaagggaaatgggtaatgatcatgttaattctcttgtattg-aatgtttagaatgaaaacttaatctttgttgttgctgtga 29614340  T
Q  256 tcataaattgattgaaatttatgaatgattggatgaattgatgaatttgtgta 308  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  29614341 tcataacttgattgaaatttatgaatgattggatgaattgatgaatttgtgta 29614393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 65 - 300
Target Start/End: Complemental strand, 23839250 - 23839016
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagt-tttggaaaataaattgagggttagggtttaa 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||| |    
T  23839250 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtgtttggaagataaattgagggttagggtttga 23839151  T
Q  164 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaat 263  Q
    |||||||||| ||||| | |||||| ||||| |||||||||  ||||||| |||||||||||||||||||||||||| |  || || |||||||||||||    
T  23839150 tgatgattct-aaggggaatgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactgttgttgtgatcataaat 23839052  T
Q  264 tgattgaaatttatgaatgattggatgaattgatgaa 300  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  23839051 tgattgaaa-ttatgattgattggatgaattgatgaa 23839016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 65 - 300
Target Start/End: Original strand, 10986184 - 10986418
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttagggtttaa 163  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||| ||||||||||||||||||||| |    
T  10986184 ggtaagggtgagactatctttcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttga 10986283  T
Q  164 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaat 263  Q
    |||||||||||| ||||| |||||| ||||| |||||||||  ||||||| |||||||||||||||||||||||||| |  || || |||||||||||||    
T  10986284 tgatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactgttgttgtgatcataaat 10986382  T
Q  264 tgattgaaatttatgaatgattggatgaattgatgaa 300  Q
    ||||||||| ||| || ||||||||||||||||||||    
T  10986383 tgattgaaa-ttacgattgattggatgaattgatgaa 10986418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 57 - 300
Target Start/End: Complemental strand, 18800497 - 18800255
Alignment:
Q  57 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaata-aattgagggtta 155  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  18800497 aaaactaatgtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaatagaattgagggtta 18800398  T
Q  156 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 255  Q
    |||||| |||||||||||| |||||| || ||||||||| |||||||||  ||||||| | ||||||| ||||||| |||||||| | ||| || |||||    
T  18800397 gggtttgatgatgattctggagggaa-tgagtaatgatcatgttaattctgttgtaatgtgatgttcaaaatgaaatcttaatctatattgttgttgtga 18800299  T
Q  256 tcataaattgattgaaatttatgaatgattggatgaattgatgaa 300  Q
    ||| |||||||||||||  ||| | ||||||||||||||||||||    
T  18800298 tcacaaattgattgaaa-atataattgattggatgaattgatgaa 18800255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 65 - 297
Target Start/End: Complemental strand, 4477909 - 4477678
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttagggtttaa 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||| |||||||||||| |    
T  4477909 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtttga 4477810  T
Q  164 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaat 263  Q
    |||||||||||| ||||| |||||| ||||| || ||||||  ||||||| ||||||| |||||||||||||||||| | ||| || |||||||||||||    
T  4477809 tgatgattctgaggggaa-tgggtattgatcatgctaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgttgtgatcataaat 4477711  T
Q  264 tgattgaaatttatgaatgattggatgaattgat 297  Q
    ||||||||| |||||| ||||||||||| |||||    
T  4477710 tgattgaaa-ttatgattgattggatgatttgat 4477678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 57 - 194
Target Start/End: Original strand, 930091 - 930227
Alignment:
Q  57 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 156  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||||| |||||||||||||||||||    
T  930091 aaaactaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgtatagttttgaaaaataaattgagggttag 930190  T
Q  157 ggtttaatgatgattctgaagggaattgggtaatgatc 194  Q
    ||||| |||||| |||||||||||| ||||||||||||    
T  930191 ggtttgatgatgtttctgaagggaa-tgggtaatgatc 930227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 65 - 300
Target Start/End: Original strand, 21565215 - 21565449
Alignment:
Q  65 ggtaagggtgagactatctctcaataatc-ataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaa 163  Q
    ||||||||||||||||||||||| ||||  ||||| | ||||||| |||||||||||||||||||||   |||   |  ||||||||||||||||||| |    
T  21565215 ggtaagggtgagactatctctcattaatagataatatttaatttcggaaaattgacctaattgcttaaccttgaggataaaattgagggttagggtttga 21565314  T
Q  164 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaat 263  Q
    |||||||||| | |||||| ||||||||||| ||||||||   ||||||| | | |||| |||||||| |||||||| |  || ||||||||||||||||    
T  21565315 tgatgattctaaggggaat-gggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactgttgctgtgatcataaat 21565413  T
Q  264 tgattgaaatttatgaatgattggatgaattgatgaa 300  Q
    |||||||||  ||| | ||||||||||||||||||||    
T  21565414 tgattgaaa-atataattgattggatgaattgatgaa 21565449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 57 - 175
Target Start/End: Complemental strand, 12168422 - 12168305
Alignment:
Q  57 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 156  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||  |||||    
T  12168422 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttag 12168324  T
Q  157 ggtttaatgatgattctga 175  Q
    ||||| |||||||||||||    
T  12168323 ggtttgatgatgattctga 12168305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 57 - 175
Target Start/End: Complemental strand, 19287331 - 19287214
Alignment:
Q  57 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 156  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||  |||||    
T  19287331 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttag 19287233  T
Q  157 ggtttaatgatgattctga 175  Q
    ||||| |||||||||||||    
T  19287232 ggtttgatgatgattctga 19287214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 57 - 175
Target Start/End: Original strand, 19785865 - 19785982
Alignment:
Q  57 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 156  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||  ||||||||||||||||| |||  |||||    
T  19785865 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctagttgaatagttttggaaaataaaatgaaagttag 19785963  T
Q  157 ggtttaatgatgattctga 175  Q
    ||||| |||||||||||||    
T  19785964 ggtttgatgatgattctga 19785982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 57 - 175
Target Start/End: Complemental strand, 19878515 - 19878398
Alignment:
Q  57 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 156  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||  |||||    
T  19878515 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttag 19878417  T
Q  157 ggtttaatgatgattctga 175  Q
    ||||| |||||||||||||    
T  19878416 ggtttgatgatgattctga 19878398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 57 - 175
Target Start/End: Complemental strand, 19884291 - 19884174
Alignment:
Q  57 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 156  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||  |||||    
T  19884291 aaaactaaggttagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttag 19884193  T
Q  157 ggtttaatgatgattctga 175  Q
    ||||| |||||||||||||    
T  19884192 ggtttgatgatgattctga 19884174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 65 - 144
Target Start/End: Original strand, 34639990 - 34640069
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataa 144  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  34639990 ggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattgaatagttttggaaaataa 34640069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 65 - 144
Target Start/End: Original strand, 34646664 - 34646743
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataa 144  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  || |||||||||||||    
T  34646664 ggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattgaataattttggaaaataa 34646743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 25469708 - 25469816
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 164  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||  | ||||||||||||||  |||   ||||||||| ||    
T  25469708 ggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttggaaaataatatgaaaattagggtttgat 25469805  T
Q  165 gatgattctga 175  Q
    ||| |||||||    
T  25469806 gataattctga 25469816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 117
Target Start/End: Original strand, 24512851 - 24512899
Alignment:
Q  69 agggtgagactatctctcaataatcataatctataatttctgaaaattg 117  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||    
T  24512851 agggtgagactatctctcaataatcatagtatataatttctgaaaattg 24512899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 114
Target Start/End: Complemental strand, 9187547 - 9187498
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 114  Q
    ||||||||||||||||||||||||||||| ||||  ||||||||||||||    
T  9187547 ggtaagggtgagactatctctcaataatcttaatacataatttctgaaaa 9187498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 25348539 - 25348486
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 118  Q
    |||||||||||||||||||||||||||| ||| | || ||||||||||||||||    
T  25348539 ggtaagggtgagactatctctcaataataatagtatagaatttctgaaaattga 25348486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 25598696 - 25598643
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 118  Q
    |||||||||||||||| |||||||| |||||||| |||| ||||||||||||||    
T  25598696 ggtaagggtgagactaactctcaatgatcataatatatattttctgaaaattga 25598643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 25397225 - 25397172
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 118  Q
    |||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  25397225 ggtaagggtgaggctaactctcgatgatcataatatataatttctgaaaattga 25397172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 118
Target Start/End: Original strand, 2286770 - 2286823
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 118  Q
    |||||||||||||||| |||||||| ||  |||| ||||| |||||||||||||    
T  2286770 ggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 2286823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 118
Target Start/End: Original strand, 19471338 - 19471391
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 118  Q
    |||||||||||| ||| ||||| || |||||||| ||||||||||| |||||||    
T  19471338 ggtaagggtgaggctacctctcgatgatcataatatataatttctggaaattga 19471391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 126
Target Start/End: Complemental strand, 31252474 - 31252413
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 126  Q
    ||||||||||||| ||||| | ||| || ||||| ||||||||||||||||| | |||||||    
T  31252474 ggtaagggtgagattatcttttaatgattataatatataatttctgaaaattaatctaattg 31252413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 57 - 281
Target Start/End: Complemental strand, 111942 - 111717
Alignment:
Q  57 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaa-ttgacctaattgcttagttttggaaaataaattgagggtta 155  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||    
T  111942 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaaattgacctaattgcatagttttggaagataaattgagggtta 111843  T
Q  156 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 255  Q
    |||||| ||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  111842 gggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 111743  T
Q  256 tcataaattgattgaaatttatgaat 281  Q
    ||||||||||||||||||| ||||||    
T  111742 tcataaattgattgaaattgatgaat 111717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 184; Significance: 1e-99; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 57 - 308
Target Start/End: Original strand, 8045828 - 8046078
Alignment:
Q  57 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 156  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  8045828 aaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 8045926  T
Q  157 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 256  Q
    ||||| | ||  ||||||||||||| ||||||| |||  ||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  8045927 ggtttgacgagaattctgaagggaaatgggtaaagataatgttaattctcttgtaatataatgttcagaatgaaaacttaatccttgttgttgctgtgat 8046026  T
Q  257 cataaattgattgaaatttatgaatgattggatgaattgatgaatttgtgta 308  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  8046027 cataaattgattgaaatttatgagtgattggatgaattgatgaatttgtgta 8046078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 57 - 308
Target Start/End: Complemental strand, 11848173 - 11847916
Alignment:
Q  57 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaa------ttgag 150  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || |||||||| ||||| ||      |||||    
T  11848173 aaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaatcaattgag 11848074  T
Q  151 ggttagggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgc 250  Q
    ||||||||||| |||| |||||||||| | | |||||||||||| ||||||| |  || ||||||||||||||||||||||||||||||||||||| |||    
T  11848073 ggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatccttttataatataatgttcagaatgaaaacttaatctttgttgttgc 11847974  T
Q  251 tgtgatcataaattgattgaaatttatgaatgattggatgaattgatgaatttgtgta 308  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  11847973 tgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgta 11847916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 65 - 175
Target Start/End: Complemental strand, 53483756 - 53483646
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaat-tgagggttagggtttaa 163  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||  ||||||| |||||  ||| |||   ||||||||| |    
T  53483756 ggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaattagggtttga 53483658  T
Q  164 tgatgattctga 175  Q
    ||||||||||||    
T  53483657 tgatgattctga 53483646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 117
Target Start/End: Complemental strand, 15408191 - 15408139
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 117  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  15408191 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 15408139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 8834948 - 8834895
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 118  Q
    |||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  8834948 ggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 8834895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 13888694 - 13888641
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 118  Q
    |||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  13888694 ggtaagggtgaggctaactctcaatgatcataatgtataatttctgaaaattga 13888641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 116
Target Start/End: Complemental strand, 14486712 - 14486661
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    ||||||||||||||||||  ||||| |||||||| |||||||||||||||||    
T  14486712 ggtaagggtgagactatccttcaatgatcataatatataatttctgaaaatt 14486661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 118
Target Start/End: Original strand, 22724691 - 22724742
Alignment:
Q  67 taagggtgagactatctctcaataatcataatctataatttctgaaaattga 118  Q
    |||||||||||||||||||||||||| ||| | || ||||||||||||||||    
T  22724691 taagggtgagactatctctcaataataatagtatagaatttctgaaaattga 22724742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 15245268 - 15245215
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 118  Q
    |||||||||||| ||| |||||||| ||| |||| |||||||||||||||||||    
T  15245268 ggtaagggtgaggctaactctcaatgatcgtaatatataatttctgaaaattga 15245215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 67 - 118
Target Start/End: Complemental strand, 15308171 - 15308120
Alignment:
Q  67 taagggtgagactatctctcaataatcataatctataatttctgaaaattga 118  Q
    |||||||||| ||| |||||||| ||| |||| |||||||||||||||||||    
T  15308171 taagggtgaggctaactctcaatgatcgtaatatataatttctgaaaattga 15308120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 116
Target Start/End: Complemental strand, 27906315 - 27906266
Alignment:
Q  67 taagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    |||||||| || ||||| ||||| |||||||| |||||||||||||||||    
T  27906315 taagggtgggattatctttcaatgatcataatgtataatttctgaaaatt 27906266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 97
Target Start/End: Original strand, 15747552 - 15747592
Alignment:
Q  57 aaaactatggtaagggtgagactatctctcaataatcataa 97  Q
    ||||||| |||||||||||||||| ||||||||||| ||||    
T  15747552 aaaactaaggtaagggtgagactaactctcaataattataa 15747592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 173; Significance: 5e-93; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 57 - 308
Target Start/End: Original strand, 746 - 997
Alignment:
Q  57 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggtta 155  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  746 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaaaataaattgagggtta 845  T
Q  156 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 255  Q
    |||||| |||| |||| ||||||||| |||||||||||| || |||| | ||||||||||||||||||| || ||||||||||| |||||| || |||||    
T  846 gggtttgatgaggattatgaagggaaatgggtaatgatcatgataatactcttgtaatataatgttcaggataaaaacttaatc-ttgttgttgatgtga 944  T
Q  256 tcataaattgattgaaatttatgaatgattggatgaattgatgaatttgtgta 308  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  945 tcataaactgattgaaatttatgagtgattggatgaattgatgaatttgtgta 997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 154; Significance: 1e-81; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 57 - 308
Target Start/End: Original strand, 1893 - 2143
Alignment:
Q  57 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaa-ttgacctaattgcttagttttggaaaataaattgagggtta 155  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||| ||||||||||    
T  1893 aaaactaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaaattgacctaattgtatagttttggaaaataatttgagggtta 1992  T
Q  156 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 255  Q
    |||||| ||||||||| ||| || |  |||||||||||  ||||||||| |||||||| ||||||||| ||||||||||||||| |||||| ||||||||    
T  1993 gggtttgatgatgattttgatggaa--tgggtaatgattatgttaattctcttgtaatttaatgttcataatgaaaacttaatccttgttgttgctgtga 2090  T
Q  256 tcataaattgattgaaatttatgaatgattggatgaattgatgaatttgtgta 308  Q
    |||||| |||||||||||| |||| |||||| |||||||||||||||||||||    
T  2091 tcataacttgattgaaattgatgagtgattgtatgaattgatgaatttgtgta 2143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 57 - 308
Target Start/End: Original strand, 8570 - 8820
Alignment:
Q  57 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaa-ttgacctaattgcttagttttggaaaataaattgagggtta 155  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||| ||||||||||    
T  8570 aaaactaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaaattgacctaattgtatagttttggaaaataatttgagggtta 8669  T
Q  156 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 255  Q
    |||||| ||||||||| ||| || |  |||||||||||  ||||||||| |||||||| ||||||||| ||||||||||||||| |||||| ||||||||    
T  8670 gggtttgatgatgattatgatggaa--tgggtaatgattatgttaattctcttgtaatttaatgttcaaaatgaaaacttaatccttgttgttgctgtga 8767  T
Q  256 tcataaattgattgaaatttatgaatgattggatgaattgatgaatttgtgta 308  Q
    |||||| |||||||||||| || | |||||| |||||||||||||||||||||    
T  8768 tcataacttgattgaaattgataagtgattgtatgaattgatgaatttgtgta 8820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 154; Significance: 1e-81; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 65 - 301
Target Start/End: Original strand, 14399 - 14635
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagtttt-ggaaaataaattgagggttagggtttaa 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||| |    
T  14399 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttga 14498  T
Q  164 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaat 263  Q
    |||||||||||||||||| |||||||||||| |||||||||  ||||||| | |||||| ||||||||||||||||| || || |||||||||||||||     
T  14499 tgatgattctgaagggaaatgggtaatgatcatgttaattctgttgtaatgtgatgttccgaatgaaaacttaatctatgctgttgctgtgatcataaac 14598  T
Q  264 tgattgaaatttatgaatgattggatgaattgatgaat 301  Q
    |||||||||  ||||| ||||||||| |||||||||||    
T  14599 tgattgaaa-atatgattgattggataaattgatgaat 14635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 152; Significance: 2e-80; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 65 - 300
Target Start/End: Complemental strand, 44477674 - 44477441
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  44477674 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtttgat 44477575  T
Q  165 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaatt 264  Q
    ||||||| ||| ||||| |||||| ||||| |||||||||  ||||||  ||||||| |||||||||||||||||| |  || || ||||||||||||||    
T  44477574 gatgattttgaggggaa-tgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataaatt 44477476  T
Q  265 gattgaaatttatgaatgattggatgaattgatgaa 300  Q
    |||||||| |||||| ||||||||||||||||||||    
T  44477475 gattgaaa-ttatgattgattggatgaattgatgaa 44477441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 65 - 300
Target Start/End: Complemental strand, 44492832 - 44492599
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  44492832 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtttgat 44492733  T
Q  165 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaatt 264  Q
    ||||||| ||| ||||| |||||| ||||| |||||||||  ||||||  ||||||| |||||||||||||||||| |  || || ||||||||||||||    
T  44492732 gatgattttgaggggaa-tgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataaatt 44492634  T
Q  265 gattgaaatttatgaatgattggatgaattgatgaa 300  Q
    |||||||| |||||| ||||||||||||||||||||    
T  44492633 gattgaaa-ttatgattgattggatgaattgatgaa 44492599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 65 - 308
Target Start/End: Original strand, 8727736 - 8727979
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagtttt-ggaaaataaattgagggttagggtttaa 163  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||| |    
T  8727736 ggtaagggtgagattatccctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttga 8727835  T
Q  164 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaat 263  Q
     ||||||||||| ||| || ||||| ||||| |||||||||  ||||||| |||||||||||||||||||||||||| |  || || |||||||||||||    
T  8727836 cgatgattctgaggggtat-gggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactgttgttgtgatcataaat 8727934  T
Q  264 tgattgaaatttatgaatgattggatgaattgatgaatttgtgta 308  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||    
T  8727935 tgattgaaaattatgagtgattggatgaattgatgaatttgtgta 8727979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 57 - 308
Target Start/End: Complemental strand, 23866674 - 23866423
Alignment:
Q  57 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 156  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  23866674 aaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 23866576  T
Q  157 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattc-ccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 255  Q
    ||||| ||||||||| ||||| ||| |||||||||||| |||||||||   |||||||||||||||||||||  |||||||||| |||||| |||| |||    
T  23866575 ggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatc-ttgttgttgctctga 23866477  T
Q  256 tcataaattga-ttgaaatttatgaatgattggatgaattgatgaatttgtgta 308  Q
    || |||| ||| ||| ||||||||| ||||||||||||||||||||||||||||    
T  23866476 tcgtaaactgatttggaatttatgagtgattggatgaattgatgaatttgtgta 23866423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 153 - 300
Target Start/End: Original strand, 27940946 - 27941091
Alignment:
Q  153 ttagggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctg 252  Q
    ||||||||| ||||||||||||| |||||| ||||| ||||| |||||||||  ||||||| |||||||||||||||||| ||||||| |  || || |     
T  27940946 ttagggtttgatgatgattctgaggggaat-gggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaatttaatctatactgttgtta 27941044  T
Q  253 tgatcataaattgattgaaatttatgaatgattggatgaattgatgaa 300  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||    
T  27941045 tgatcataaattgattgaaa-ttatgattgattggatgaattgatgaa 27941091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 65 - 175
Target Start/End: Complemental strand, 17054642 - 17054533
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 164  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||  ||||||||||||||||  |||  |||||||||| ||    
T  17054642 ggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataagatgaaagttagggtttgat 17054544  T
Q  165 gatgattctga 175  Q
    |||||||||||    
T  17054543 gatgattctga 17054533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 7 - 118
Target Start/End: Complemental strand, 18614382 - 18614271
Alignment:
Q  7 gtgagatgaacaagtatagtcagagaatctggtcgttgtgcgttt-cttctaaaactatggtaagggtgagactatctctcaataatcataatctataat 105  Q
    |||||| ||||||||| |||||||||||| | || |||||||||| ||||||||  || ||||||||||||||||||||||||||||||| || ||||||    
T  18614382 gtgagaagaacaagtagagtcagagaatccgatcattgtgcgttttcttctaaat-taaggtaagggtgagactatctctcaataatcatgatatataat 18614284  T
Q  106 ttctgaaaattga 118  Q
    |||||||||||||    
T  18614283 ttctgaaaattga 18614271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 65 - 126
Target Start/End: Original strand, 23482056 - 23482117
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 126  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  23482056 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23482117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 39364972 - 39364919
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 118  Q
    |||||||||||||||||||||||||||| ||| | || ||||||||||||||||    
T  39364972 ggtaagggtgagactatctctcaataataatagtatagaatttctgaaaattga 39364919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 116
Target Start/End: Original strand, 29643389 - 29643440
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    ||||||||||||| ||||| |||||||||||||| | |||||||||||||||    
T  29643389 ggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 29643440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 14056567 - 14056619
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 117  Q
    |||||||||||||||||||||||||||| ||| | | ||| ||||||||||||    
T  14056567 ggtaagggtgagactatctctcaataataatagtatgtaaattctgaaaattg 14056619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 117
Target Start/End: Complemental strand, 25112028 - 25111976
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 117  Q
    |||||||||||||||||||||||||||| ||| | | ||| ||||||||||||    
T  25112028 ggtaagggtgagactatctctcaataataatagtatgtaaattctgaaaattg 25111976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 65 - 116
Target Start/End: Original strand, 24320674 - 24320725
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  24320674 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 24320725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 21931749 - 21931696
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 118  Q
    |||||||||||| ||| |||||||| || ||||| ||||| |||||||||||||    
T  21931749 ggtaagggtgaggctaactctcaatgattataatatataacttctgaaaattga 21931696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 152; Significance: 2e-80; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 65 - 300
Target Start/End: Original strand, 19661457 - 19661690
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 164  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||    
T  19661457 ggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttgat 19661556  T
Q  165 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaatt 264  Q
    ||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||| |||||||||||||||||| | ||| || ||||||||||||||    
T  19661557 gatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgttgtgatcataaatt 19661655  T
Q  265 gattgaaatttatgaatgattggatgaattgatgaa 300  Q
    |||||||| |||||| ||||||||||||||||||||    
T  19661656 gattgaaa-ttatgattgattggatgaattgatgaa 19661690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 65 - 300
Target Start/End: Complemental strand, 6483769 - 6483536
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  6483769 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtttgat 6483670  T
Q  165 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaatt 264  Q
    ||||||| ||| ||||| |||||| ||||| |||||||||  ||||||  ||||||| |||||||||||||||||| |  || || ||||||||||||||    
T  6483669 gatgattttgaggggaa-tgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataaatt 6483571  T
Q  265 gattgaaatttatgaatgattggatgaattgatgaa 300  Q
    |||||||| |||||| |||| |||||||||||||||    
T  6483570 gattgaaa-ttatgattgatgggatgaattgatgaa 6483536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 65 - 300
Target Start/End: Complemental strand, 6487236 - 6487003
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  6487236 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtttgat 6487137  T
Q  165 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaatt 264  Q
    ||||||| ||| ||||| |||||| ||||| |||||||||  ||||||  ||||||| |||||||||||||||||| |  || || ||||||||||||||    
T  6487136 gatgattttgaggggaa-tgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataaatt 6487038  T
Q  265 gattgaaatttatgaatgattggatgaattgatgaa 300  Q
    |||||||| |||||| |||| |||||||||||||||    
T  6487037 gattgaaa-ttatgattgatgggatgaattgatgaa 6487003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 57 - 230
Target Start/End: Complemental strand, 26583886 - 26583715
Alignment:
Q  57 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 156  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  26583886 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 26583788  T
Q  157 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaa 230  Q
    || || ||||||||||||| |||||  ||||||||||| |||||| |   ||||||  | ||||||||||||||    
T  26583787 ggcttgatgatgattctgaggggaa-agggtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaa 26583715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 65 - 300
Target Start/End: Complemental strand, 23879059 - 23878826
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaat 164  Q
    ||||||||||||||||||||||| |||| || || |||||||||  ||||||||||||||||||||   |||   | |||||||||||||||||||   |    
T  23879059 ggtaagggtgagactatctctcattaataattatatataatttcgaaaaattgacctaattgcttaaccttgaggattaaattgagggttagggttgt-t 23878961  T
Q  165 gatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaatt 264  Q
    ||||||||||| |||||| ||||||||||| ||||||||   ||||||| | ||||||||||||||| |||||||| |  || || ||||||||||||||    
T  23878960 gatgattctgaggggaatggggtaatgatcatgttaattatgttgtaatgtgatgttcagaatgaaatcttaatctatactgttgttgtgatcataaatt 23878861  T
Q  265 gattgaaatttatgaatgattggatgaattgatgaa 300  Q
    ||||||||  ||  | ||||||||||||||||||||    
T  23878860 gattgaaa-atagaattgattggatgaattgatgaa 23878826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 65 - 300
Target Start/End: Original strand, 23089058 - 23089292
Alignment:
Q  65 ggtaagggtgagactatctctcaataatc-ataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaa 163  Q
    ||||||||||||||||||||||| ||||  ||||| | ||||||| |||||||||||||||||||||   |||   |  ||||||||||||||||||| |    
T  23089058 ggtaagggtgagactatctctcattaatagataatatttaatttcggaaaattgacctaattgcttaaccttgaggataaaattgagggttagggtttga 23089157  T
Q  164 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaat 263  Q
    |||||||||| | |||||| ||||||||||| ||||||||   ||||||| | | |||| |||||||| |||||||| |  || ||||||||||||||||    
T  23089158 tgatgattctaaggggaat-gggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactgttgctgtgatcataaat 23089256  T
Q  264 tgattgaaatttatgaatgattggatgaattgatgaa 300  Q
    |||||||||  ||| | ||||||||||||||||||||    
T  23089257 tgattgaaa-atataattgattggatgaattgatgaa 23089292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 65 - 300
Target Start/End: Original strand, 23101466 - 23101700
Alignment:
Q  65 ggtaagggtgagactatctctcaataatc-ataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaa 163  Q
    ||||||||||||||||||||||| ||||  ||||| | ||||||| ||||||||||||||||| |||   |||   |  ||||||||||||||||||| |    
T  23101466 ggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgtttaaccttgaggataaaattgagggttagggtttga 23101565  T
Q  164 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaat 263  Q
    |||||||||||| |||||| ||||||||||| ||||||||   ||||||| | | |||| |||||||| |||||||| |  || || |||||||||||||    
T  23101566 tgatgattctgaggggaat-gggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactgttgttgtgatcataaat 23101664  T
Q  264 tgattgaaatttatgaatgattggatgaattgatgaa 300  Q
    |||||||||  ||| | |||||||||||||| |||||    
T  23101665 tgattgaaa-atataattgattggatgaattcatgaa 23101700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 5706027 - 5706137
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaat-tgagggttagggtttaa 163  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||  ||||||| |||||  ||| |||   ||||||||| |    
T  5706027 ggtaagggtgagactatctctcattaatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaattagggtttga 5706125  T
Q  164 tgatgattctga 175  Q
    ||||||||||||    
T  5706126 tgatgattctga 5706137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 65 - 126
Target Start/End: Complemental strand, 23265194 - 23265133
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 126  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  23265194 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23265133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 65 - 126
Target Start/End: Complemental strand, 23280262 - 23280201
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 126  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  23280262 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23280201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 21908411 - 21908353
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaa 123  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||    
T  21908411 ggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatctaa 21908353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 24661629 - 24661576
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 118  Q
    |||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  24661629 ggtaagggtgaggctaactctcgatgatcataatatataatttctgaaaattga 24661576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 65 - 116
Target Start/End: Complemental strand, 10628 - 10577
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  10628 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 10577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 65 - 116
Target Start/End: Original strand, 25180933 - 25180984
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  25180933 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 25180984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 165
Target Start/End: Complemental strand, 26885233 - 26885133
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagtt-ttggaaaataaattgagggttagggtttaa 163  Q
    |||||||||| || ||||| ||||||||| |||| ||||||||||||||||| | ||||| |  ||||| ||||| || ||||||||  ||||||| |||    
T  26885233 ggtaagggtgggattatctttcaataatc-taatgtataatttctgaaaattaatctaatggaatagttcttggagaaaaaattgagaattagggtataa 26885135  T
Q  164 tg 165  Q
    ||    
T  26885134 tg 26885133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 149; Significance: 1e-78; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 65 - 300
Target Start/End: Original strand, 20437027 - 20437261
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttagggtttaa 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||| |    
T  20437027 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttga 20437126  T
Q  164 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaat 263  Q
    |||||||||||| ||||| |||||| ||||| ||||||||   ||||||| |||||||||||||||||||||||||| |  || || |||||||||||||    
T  20437127 tgatgattctgaggggaa-tgggtattgatcatgttaattatgttgtaatgtaatgttcagaatgaaaacttaatctatactgttgttgtgatcataaat 20437225  T
Q  264 tgattgaaatttatgaatgattggatgaattgatgaa 300  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  20437226 tgattgaaa-ttatgattgattggatgaattgatgaa 20437261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 57 - 175
Target Start/End: Complemental strand, 41112094 - 41111977
Alignment:
Q  57 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 156  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||| |||||||  |||  |||||    
T  41112094 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttgaaaaataagatgaaagttag 41111996  T
Q  157 ggtttaatgatgattctga 175  Q
    ||||| |||||||||||||    
T  41111995 ggtttgatgatgattctga 41111977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 7 - 126
Target Start/End: Complemental strand, 32651682 - 32651563
Alignment:
Q  7 gtgagatgaacaagtatagtcagagaatctggtcgttgtgcgttt-cttctaaaactatggtaagggtgagactatctctcaataatcataatctataat 105  Q
    |||||| ||||||||  |||||||||||| | |||||||| |||| ||||||||  || |||||||||||||||||||||||||||||||| | ||||||    
T  32651682 gtgagaagaacaagtggagtcagagaatccgatcgttgtgtgttttcttctaaat-taaggtaagggtgagactatctctcaataatcatagtatataat 32651584  T
Q  106 ttctgaaaattgacctaattg 126  Q
    ||||||||||||| |||||||    
T  32651583 ttctgaaaattgatctaattg 32651563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 65 - 126
Target Start/End: Complemental strand, 18712851 - 18712790
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 126  Q
    |||| ||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  18712851 ggtatgggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 18712790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 19663520 - 19663572
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 117  Q
    |||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  19663520 ggtaagggtgagactatctctcgataatcatagtatataatttctgaaaattg 19663572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 118
Target Start/End: Original strand, 10811786 - 10811839
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 118  Q
    |||||||||||||||||||||||||||| ||| | || ||||||||||||||||    
T  10811786 ggtaagggtgagactatctctcaataataatagtgtagaatttctgaaaattga 10811839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 20805373 - 20805320
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 118  Q
    |||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  20805373 ggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 20805320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 65 - 117
Target Start/End: Complemental strand, 11158145 - 11158093
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 117  Q
    |||||||||||||||| |||||||| ||| |||| ||||||||||||||||||    
T  11158145 ggtaagggtgagactaactctcaatgatcttaatatataatttctgaaaattg 11158093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 65 - 116
Target Start/End: Original strand, 20851136 - 20851187
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  20851136 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20851187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 65 - 116
Target Start/End: Original strand, 20857763 - 20857814
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  20857763 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20857814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 65 - 116
Target Start/End: Complemental strand, 21706327 - 21706276
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  21706327 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 21706276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 65 - 116
Target Start/End: Complemental strand, 21710869 - 21710818
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  21710869 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 21710818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 141; Significance: 6e-74; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 65 - 300
Target Start/End: Original strand, 10199 - 10433
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttagggtttaa 163  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||| |||||||||||| |    
T  10199 ggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtttga 10298  T
Q  164 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaat 263  Q
    |||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||| |||||||||||||||||| |  || || |||||||||||||    
T  10299 tgatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataaat 10397  T
Q  264 tgattgaaatttatgaatgattggatgaattgatgaa 300  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  10398 tgattgaaa-ttatgattgattggatgaattgatgaa 10433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 141; Significance: 6e-74; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 65 - 300
Target Start/End: Original strand, 1529 - 1763
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttagggtttaa 163  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||| |||||||||||| |    
T  1529 ggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtttga 1628  T
Q  164 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaat 263  Q
    |||||||||||| ||||| |||||| ||||| |||||||||  ||||||| ||||||| |||||||||||||||||| |  || || |||||||||||||    
T  1629 tgatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataaat 1727  T
Q  264 tgattgaaatttatgaatgattggatgaattgatgaa 300  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  1728 tgattgaaa-ttatgattgattggatgaattgatgaa 1763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 141; Significance: 6e-74; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 57 - 300
Target Start/End: Complemental strand, 11401 - 11159
Alignment:
Q  57 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaata-aattgagggtta 155  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  11401 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaatagaattgagggtta 11302  T
Q  156 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 255  Q
    |||||| |||||||||||| |||||| || ||||||||| |||||||||  ||||||| | ||||||| ||||||| |||||||  |  || ||||||||    
T  11301 gggtttgatgatgattctggagggaa-tgagtaatgatcatgttaattctgttgtaatgtgatgttcaaaatgaaatcttaatccatactgttgctgtga 11203  T
Q  256 tcataaattgattgaaatttatgaatgattggatgaattgatgaa 300  Q
    ||| |||||||||||||  ||| | ||||||||||||||||||||    
T  11202 tcacaaattgattgaaa-atataattgattggatgaattgatgaa 11159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 57 - 301
Target Start/End: Complemental strand, 350 - 109
Alignment:
Q  57 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 156  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  350 aaaactaaggtaagggtgagactatctctcaataaccataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 252  T
Q  157 ggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 256  Q
    ||||| ||||||||||||| ||||| |||||||||||| ||||||||  |||||| |||  |||||||| |||| ||||||||| ||||  || ||||||    
T  251 ggtttgatgatgattctgaggggaa-tgggtaatgatcatgttaattttcttgtattatggtgttcagattgaagacttaatctatgttattgatgtgat 153  T
Q  257 cataaattgattgaaatttatgaatgattggatgaattgatgaat 301  Q
    ||||||||| |||||| |||||| || |||||| |||||||||||    
T  152 cataaattggttgaaa-ttatgattggttggataaattgatgaat 109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 131; Significance: 6e-68; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 57 - 301
Target Start/End: Complemental strand, 18229 - 17985
Alignment:
Q  57 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggtta 155  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  18229 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttttgaaaattgacctaattgcttagctttaggaaaataaattgagggtta 18130  T
Q  156 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaattc-ccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtg 254  Q
     ||||||||||||||||| | ||||| | ||||||| || |||||||||   ||||||| | |||| |||||||||||||||| || ||||| |||||||    
T  18129 aggtttaatgatgattctaacgggaaat-ggtaatggtcatgttaattctgtttgtaatgtgatgtccagaatgaaaacttaacctatgttgttgctgtg 18031  T
Q  255 atcataaattgattgaaatttatgaatgattggatgaattgatgaat 301  Q
    ||||| |||||||||||||||  || ||||||||| |||||||||||    
T  18030 atcatgaattgattgaaattt-ggattgattggataaattgatgaat 17985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 108; Significance: 3e-54; HSPs: 4)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 9 - 144
Target Start/End: Complemental strand, 1039 - 904
Alignment:
Q  9 gagatgaacaagtatagtcagagaatctggtcgttgtgcgtttcttctaaaactatggtaagggtgagactatctctcaataatcataatctataatttc 108  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  1039 gagaagaacaagtatagtcagagaatccggtcgttgtgcgtttcttctaaaactaaggtaagggtgagactatctctcaataatcataatctatagtttc 940  T
Q  109 tgaaaattgacctaattgcttagttttggaaaataa 144  Q
    ||||||||||||||||||| |||| |||||| ||||    
T  939 tgaaaattgacctaattgcatagtcttggaagataa 904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 9 - 144
Target Start/End: Complemental strand, 8184 - 8049
Alignment:
Q  9 gagatgaacaagtatagtcagagaatctggtcgttgtgcgtttcttctaaaactatggtaagggtgagactatctctcaataatcataatctataatttc 108  Q
    |||| ||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  8184 gagaagaacaagtagagtcagagaatccggtcgttgtgcgtttcttctaaaactaaggtaagggtgagactatctctcaataatcataatctatagtttc 8085  T
Q  109 tgaaaattgacctaattgcttagttttggaaaataa 144  Q
    ||||||||||||||||||| |||| |||||| ||||    
T  8084 tgaaaattgacctaattgcatagtcttggaagataa 8049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 207 - 301
Target Start/End: Complemental strand, 899 - 806
Alignment:
Q  207 ttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaattgattgaaatttatgaatgattggatgaattgatgaat 301  Q
    ||||||| | |||||||||||||||||||||||| ||||| |||||||||||||||||||||| || ||||||  |||||||| |||||||||||    
T  899 ttgtaatgtgatgttcagaatgaaaacttaatctgtgttgttgctgtgatcataaattgattggaa-ttatgagggattggataaattgatgaat 806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 207 - 301
Target Start/End: Complemental strand, 8044 - 7951
Alignment:
Q  207 ttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaattgattgaaatttatgaatgattggatgaattgatgaat 301  Q
    ||||||| | |||||||||||||||||||||||| ||||| |||||||||||||||||||||| || ||||||  |||||||| |||||||||||    
T  8044 ttgtaatgtgatgttcagaatgaaaacttaatctgtgttgttgctgtgatcataaattgattggaa-ttatgagggattggataaattgatgaat 7951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 65 - 300
Target Start/End: Original strand, 3296 - 3531
Alignment:
Q  65 ggtaagggtgagactatctctcaataatc-ataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaa 163  Q
    ||||||||||||||||||||||| ||||  ||||| | ||||||| |||||||||||||||||||||   ||||  |  ||||||||||||||||||| |    
T  3296 ggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgcttaaccttggggataaaattgagggttagggtttga 3395  T
Q  164 tgatgattctgaagggaattgggtaatga-tcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaa 262  Q
    |||||||||||| |||||| ||||||||| || ||||||||   ||||||| | ||||||||||||||| |||||||| |  || ||||||||||| |||    
T  3396 tgatgattctgaggggaat-gggtaatgaatcatgttaattttgttgtaatgtgatgttcagaatgaaatcttaatctatactgttgctgtgatcacaaa 3494  T
Q  263 ttgattgaaatttatgaatgattggatgaattgatgaa 300  Q
    ||||||||||  ||| | ||||||||||||||||||||    
T  3495 ttgattgaaa-atataattgattggatgaattgatgaa 3531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 57 - 201
Target Start/End: Complemental strand, 30917 - 30772
Alignment:
Q  57 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaat-aaattgagggtta 155  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  | ||||||||| |||    
T  30917 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaggtaaaattgaggatta 30818  T
Q  156 gggtttaatgatgattctgaagggaattgggtaatgatcgtgttaa 201  Q
    |||||| ||||||||| ||| |||||| | |||| |||| ||||||    
T  30817 gggtttgatgatgattttgaggggaatggtgtaacgatcatgttaa 30772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 65 - 300
Target Start/End: Original strand, 3625 - 3859
Alignment:
Q  65 ggtaagggtgagactatctctcaataatc-ataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttagggtttaa 163  Q
    ||||||||||||||||||||||| ||||  ||||| | ||||||| |||||||||||||||||||||   |||   |  ||||||||||||||||||| |    
T  3625 ggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgcttaaccttgaggataaaattgagggttagggtttga 3724  T
Q  164 tgatgattctgaagggaattgggtaatgatcgtgttaattcccttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaat 263  Q
    |||||||||||| ||| || ||||||||||| ||||||||   ||||||| | |||||| |||||||| |||||||| |  || || |||||||||||||    
T  3725 tgatgattctgagggggat-gggtaatgatcatgttaattatgttgtaatgtgatgttcggaatgaaatcttaatctatactgttgttgtgatcataaat 3823  T
Q  264 tgattgaaatttatgaatgattggatgaattgatgaa 300  Q
    |||||||||  ||| | ||||||||||||||||||||    
T  3824 tgattgaaa-atataattgattggatgaattgatgaa 3859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 221 - 308
Target Start/End: Complemental strand, 3558 - 3471
Alignment:
Q  221 tcagaatgaaaacttaatctttgttgctgctgtgatcataaattgattgaaatttatgaatgattggatgaattgatgaatttgtgta 308  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  3558 tcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaatttatgggtgattggatgaattgatgaatttgtgta 3471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 57 - 175
Target Start/End: Original strand, 1728 - 1845
Alignment:
Q  57 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 156  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||  ||||||||||||||||  |||  |||||    
T  1728 aaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaagttag 1826  T
Q  157 ggtttaatgatgattctga 175  Q
    ||||| |||||||||||||    
T  1827 ggtttgatgatgattctga 1845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 57 - 175
Target Start/End: Original strand, 5751 - 5868
Alignment:
Q  57 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 156  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||  ||||||||||||||||  |||  |||||    
T  5751 aaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaagttag 5849  T
Q  157 ggtttaatgatgattctga 175  Q
    ||||| |||||||||||||    
T  5850 ggtttgatgatgattctga 5868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 15 - 126
Target Start/End: Complemental strand, 116998 - 116887
Alignment:
Q  15 aacaagtatagtcagagaatctggtcgttgtgcgttt-cttctaaaactatggtaagggtgagactatctctcaataatcataatctataatttctgaaa 113  Q
    |||||||  |||||||||||| | |||||||| |||| ||||||||  || |||||||||||||||||||||||||||||||| | ||||||||||||||    
T  116998 aacaagtggagtcagagaatccgatcgttgtgtgttttcttctaaat-taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaa 116900  T
Q  114 attgacctaattg 126  Q
    ||||| |||||||    
T  116899 attgatctaattg 116887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 65 - 173
Target Start/End: Original strand, 45278 - 45386
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaat-tgagggttagggtttaa 163  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||  ||||||| |||||  ||| |||   ||||||||| |    
T  45278 ggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaattagggtttga 45376  T
Q  164 tgatgattct 173  Q
    ||||||||||    
T  45377 tgatgattct 45386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 65 - 126
Target Start/End: Complemental strand, 16872 - 16811
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 126  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  16872 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 16811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 65 - 126
Target Start/End: Original strand, 11 - 72
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 126  Q
    ||||||||||||||||||||||||||||| ||||  |||||||||||||||||| |||||||    
T  11 ggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 72  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 65 - 126
Target Start/End: Complemental strand, 13684 - 13623
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 126  Q
    ||||||||||||||||||||||||||||| ||||  |||||||||||||||||| |||||||    
T  13684 ggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 13623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 65 - 126
Target Start/End: Original strand, 101931 - 101992
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 126  Q
    |||||||||||||||||||||||||||||||| | ||||||| ||||||||||| |||||||    
T  101931 ggtaagggtgagactatctctcaataatcatagtatataattcctgaaaattgatctaattg 101992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 117
Target Start/End: Complemental strand, 17695 - 17643
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 117  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  17695 ggtaagggtgagactatctctcaataaccataatgtataatttctgaaaattg 17643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 40535 - 40587
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 117  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  40535 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 40587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 117
Target Start/End: Complemental strand, 135525 - 135473
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 117  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  135525 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 135473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 65 - 115
Target Start/End: Original strand, 22596 - 22646
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaat 115  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  22596 ggtaagggtgagactatctctcaataatcatagtatataatttctgaaaat 22646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 34279 - 34331
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 117  Q
    |||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  34279 ggtaagggtgagactatctctcgataatcatagtatataatttctgaaaattg 34331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 12349 - 12296
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 118  Q
    |||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  12349 ggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 12296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 1438 - 1378
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaatt 125  Q
    ||||||||||||||||||| ||||| ||||| || |||||||| |||||||||| ||||||    
T  1438 ggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaattgatctaatt 1378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 15000 - 15052
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 117  Q
    |||||||||||||||| |||||||| ||| |||| ||||||||||||||||||    
T  15000 ggtaagggtgagactaactctcaatgatcttaatatataatttctgaaaattg 15052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 118
Target Start/End: Original strand, 39510 - 39563
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 118  Q
    |||||||||||| ||| |||||||| |||||||| ||||||||| |||||||||    
T  39510 ggtaagggtgaggctaactctcaatgatcataatatataatttcagaaaattga 39563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 113
Target Start/End: Complemental strand, 1501 - 1453
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaa 113  Q
    |||||||||||||||| |||||||| ||| |||| ||||||||||||||    
T  1501 ggtaagggtgagactaactctcaatgatcttaatgtataatttctgaaa 1453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 65 - 116
Target Start/End: Original strand, 1916 - 1967
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  1916 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 1967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 65 - 116
Target Start/End: Complemental strand, 9387 - 9336
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    |||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  9387 ggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 9336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 65 - 116
Target Start/End: Complemental strand, 10290 - 10239
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    ||||||||||||| |||||  ||||||||||||| | |||||||||||||||    
T  10290 ggtaagggtgagattatcttccaataatcataatatgtaatttctgaaaatt 10239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 65 - 116
Target Start/End: Complemental strand, 135489 - 135438
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    |||||| |||||| ||||| |||||| ||||||| |||||||||||||||||    
T  135489 ggtaagcgtgagattatctttcaatagtcataatatataatttctgaaaatt 135438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 65 - 116
Target Start/End: Original strand, 493032 - 493082
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    ||||||||||||| ||||| ||||||||| |||| |||||||||||||||||    
T  493032 ggtaagggtgagattatctttcaataatc-taatgtataatttctgaaaatt 493082  T

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Target: scaffold2054 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 150
Target Start/End: Complemental strand, 774 - 680
Alignment:
Q  57 aaaactatggtaagggtgagactatctctcaataatcataatctataatttctg-aaaattgacctaattgcttagttttggaaaataaattgag 150  Q
    ||||||| |||||||||| || ||||| ||||| ||| |||| ||||||||||| |||||| ||||||  |  ||||| | ||||||||||||||    
T  774 aaaactaaggtaagggtgggattatctttcaatgatcttaatatataatttctgaaaaattaacctaaaagaatagttcttgaaaataaattgag 680  T

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Target: scaffold0609 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 126
Target Start/End: Original strand, 5861 - 5922
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 126  Q
    |||||||||| || ||||| ||||| || ||||| ||||||||||||||||| | |||||||    
T  5861 ggtaagggtgggattatctttcaatgattataatatataatttctgaaaattaatctaattg 5922  T

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Target: scaffold0335 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 118
Target Start/End: Original strand, 2631 - 2684
Alignment:
Q  65 ggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 118  Q
    |||||||||||| ||| |||||||| || ||||| ||||| |||||||||||||    
T  2631 ggtaagggtgaggctaactctcaatgattataatatataacttctgaaaattga 2684  T

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