View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19395_high_5 (Length: 396)
Name: NF19395_high_5
Description: NF19395
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19395_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 79 - 360
Target Start/End: Original strand, 48286251 - 48286532
Alignment:
| Q |
79 |
acacaaaatcacaatgcagcaaccatcgcccgaacaaaaaccaataatactaccaaaaccaccttgttatagagacccaaacatccaacaaaaaccgctt |
178 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48286251 |
acacaaaatcacaatgcagcaaccatcgcccgaacaaaaaccaataatactaccaaaaccaccttgttatagagacccaaacatccaacaaaaaccgctt |
48286350 |
T |
|
| Q |
179 |
ccaacacgaaacccttctctcccaccttctttccgaccaaaacccaagaaacgtaattattgtcgcctatgttgttgcacattttgcatcatcttcctca |
278 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
48286351 |
ccaacacgaaacccttctctcccaccttctttccgaccaaaacccaagaaacgtaattattgtcgcctattttgttgcacattttgcatcatcttcctca |
48286450 |
T |
|
| Q |
279 |
ttctcttcctccttttcatcctcgccgccgcagttatctacattctctatcaaccttccataccagaattccacctcggttc |
360 |
Q |
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|||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
48286451 |
ttctcttcttccttttcatcctcgccgccgcagttatctacattctctaccaaccttccataccagaattccacctcggttc |
48286532 |
T |
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