View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19396_high_2 (Length: 248)

Name: NF19396_high_2
Description: NF19396
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19396_high_2
NF19396_high_2
[»] chr8 (65 HSPs)
chr8 (13-229)||(3677683-3677899)
chr8 (69-140)||(4786340-4786411)
chr8 (69-150)||(28384996-28385077)
chr8 (13-146)||(36450700-36450833)
chr8 (61-143)||(34897068-34897150)
chr8 (67-150)||(11803235-11803318)
chr8 (62-153)||(20873042-20873133)
chr8 (75-150)||(36934646-36934721)
chr8 (69-143)||(15816131-15816205)
chr8 (63-161)||(18170478-18170576)
chr8 (63-161)||(18634046-18634144)
chr8 (85-163)||(28642371-28642449)
chr8 (70-163)||(25192350-25192443)
chr8 (67-127)||(22493493-22493553)
chr8 (69-153)||(22651949-22652033)
chr8 (69-153)||(29510306-29510390)
chr8 (69-152)||(2572058-2572141)
chr8 (57-152)||(33405374-33405469)
chr8 (65-127)||(7658462-7658524)
chr8 (69-119)||(11927088-11927138)
chr8 (82-163)||(4673440-4673521)
chr8 (69-153)||(7472517-7472602)
chr8 (69-150)||(11944641-11944722)
chr8 (69-146)||(14134679-14134756)
chr8 (47-140)||(20679375-20679468)
chr8 (74-163)||(24362209-24362298)
chr8 (72-153)||(27213520-27213601)
chr8 (62-118)||(4948660-4948716)
chr8 (62-118)||(13844591-13844647)
chr8 (69-153)||(24669406-24669490)
chr8 (63-146)||(31109514-31109597)
chr8 (92-151)||(41838148-41838207)
chr8 (47-153)||(926768-926874)
chr8 (56-118)||(3025559-3025621)
chr8 (69-155)||(8343287-8343373)
chr8 (62-151)||(24413554-24413644)
chr8 (57-155)||(42874493-42874591)
chr8 (31-148)||(9414840-9414956)
chr8 (69-146)||(18964157-18964234)
chr8 (69-118)||(25566849-25566898)
chr8 (69-106)||(26902177-26902214)
chr8 (26-119)||(31580086-31580179)
chr8 (56-117)||(40332200-40332261)
chr8 (69-153)||(4298888-4298972)
chr8 (69-105)||(8847277-8847313)
chr8 (79-163)||(13203604-13203688)
chr8 (70-118)||(31236580-31236628)
chr8 (71-118)||(34222955-34223002)
chr8 (70-132)||(4611528-4611590)
chr8 (13-155)||(26434151-26434293)
chr8 (92-154)||(28745470-28745532)
chr8 (69-163)||(31556960-31557053)
chr8 (70-140)||(39954282-39954352)
chr8 (67-128)||(4122249-4122310)
chr8 (69-118)||(8342980-8343029)
chr8 (69-118)||(12606831-12606880)
chr8 (61-118)||(12985400-12985457)
chr8 (92-153)||(13436989-13437050)
chr8 (69-153)||(29357949-29358034)
chr8 (67-140)||(29519181-29519254)
chr8 (69-118)||(33382021-33382070)
chr8 (62-138)||(24613509-24613584)
chr8 (77-149)||(29776013-29776085)
chr8 (69-153)||(34451039-34451123)
chr8 (62-106)||(43737806-43737850)
[»] chr4 (53 HSPs)
chr4 (24-146)||(40179593-40179715)
chr4 (20-163)||(12895227-12895370)
chr4 (76-151)||(22440609-22440684)
chr4 (19-153)||(23292938-23293072)
chr4 (69-152)||(5775360-5775445)
chr4 (75-153)||(36635297-36635375)
chr4 (82-151)||(27706192-27706261)
chr4 (77-143)||(903905-903971)
chr4 (56-118)||(54580012-54580074)
chr4 (57-118)||(29205452-29205513)
chr4 (74-155)||(44081584-44081665)
chr4 (69-153)||(35157987-35158071)
chr4 (71-146)||(26504303-26504378)
chr4 (69-151)||(19482643-19482725)
chr4 (56-153)||(49430998-49431096)
chr4 (69-146)||(13783261-13783338)
chr4 (92-151)||(11651159-11651218)
chr4 (62-153)||(12797333-12797423)
chr4 (73-148)||(40742569-40742644)
chr4 (74-152)||(14126118-14126196)
chr4 (62-127)||(8423713-8423778)
chr4 (69-118)||(15029773-15029822)
chr4 (57-118)||(28964238-28964299)
chr4 (69-153)||(5414174-5414258)
chr4 (19-107)||(16073413-16073501)
chr4 (73-153)||(24343480-24343560)
chr4 (26-153)||(40481610-40481741)
chr4 (69-120)||(6485613-6485664)
chr4 (73-152)||(11931254-11931333)
chr4 (69-116)||(18576039-18576086)
chr4 (92-151)||(20521874-20521933)
chr4 (69-108)||(22234892-22234931)
chr4 (72-127)||(40613449-40613504)
chr4 (47-117)||(9996849-9996919)
chr4 (110-164)||(20950462-20950516)
chr4 (79-153)||(21539879-21539953)
chr4 (69-146)||(30298926-30299004)
chr4 (69-146)||(30327794-30327872)
chr4 (69-127)||(36409514-36409571)
chr4 (69-127)||(36423680-36423737)
chr4 (62-108)||(42640547-42640593)
chr4 (82-143)||(4383351-4383411)
chr4 (69-118)||(11596354-11596403)
chr4 (69-118)||(15659762-15659811)
chr4 (61-106)||(16189729-16189774)
chr4 (69-153)||(35723386-35723470)
chr4 (67-151)||(7012041-7012125)
chr4 (69-125)||(7214524-7214580)
chr4 (103-151)||(20633460-20633508)
chr4 (71-111)||(32915610-32915650)
chr4 (69-145)||(33950117-33950193)
chr4 (74-118)||(40774289-40774333)
chr4 (82-118)||(47263994-47264030)
[»] chr6 (79 HSPs)
chr6 (18-153)||(16833281-16833416)
chr6 (19-153)||(34595107-34595241)
chr6 (56-151)||(9658854-9658949)
chr6 (69-153)||(9027151-9027235)
chr6 (62-161)||(426509-426608)
chr6 (19-153)||(8776920-8777059)
chr6 (62-152)||(5732505-5732595)
chr6 (60-142)||(7265586-7265668)
chr6 (69-151)||(8365521-8365603)
chr6 (58-152)||(13360363-13360457)
chr6 (73-150)||(13851712-13851789)
chr6 (57-153)||(31579217-31579311)
chr6 (69-153)||(10770676-10770760)
chr6 (69-153)||(16766670-16766754)
chr6 (74-149)||(17341671-17341746)
chr6 (19-146)||(17841541-17841668)
chr6 (29-163)||(853821-853955)
chr6 (28-137)||(19040341-19040450)
chr6 (56-153)||(33001278-33001375)
chr6 (69-153)||(7938089-7938173)
chr6 (69-153)||(9107372-9107456)
chr6 (69-153)||(12696297-12696381)
chr6 (69-152)||(9629357-9629440)
chr6 (69-148)||(19044442-19044521)
chr6 (72-163)||(30866149-30866240)
chr6 (69-163)||(3398582-3398675)
chr6 (69-151)||(7086770-7086852)
chr6 (24-118)||(12627534-12627628)
chr6 (74-140)||(17302333-17302399)
chr6 (69-118)||(9025496-9025545)
chr6 (69-108)||(7027260-7027299)
chr6 (67-118)||(9522899-9522950)
chr6 (75-146)||(10888982-10889053)
chr6 (82-153)||(17435172-17435243)
chr6 (47-146)||(28152079-28152177)
chr6 (69-152)||(34073349-34073432)
chr6 (62-116)||(1700362-1700416)
chr6 (82-140)||(5970123-5970181)
chr6 (62-116)||(13364700-13364754)
chr6 (69-151)||(15489734-15489816)
chr6 (69-151)||(19147817-19147899)
chr6 (97-151)||(33303634-33303688)
chr6 (69-118)||(7151420-7151469)
chr6 (62-127)||(7377978-7378043)
chr6 (69-118)||(9617442-9617491)
chr6 (69-146)||(20371112-20371189)
chr6 (72-148)||(4040444-4040520)
chr6 (19-150)||(4877918-4878049)
chr6 (69-133)||(9195756-9195820)
chr6 (62-118)||(21206891-21206947)
chr6 (62-118)||(21924930-21924986)
chr6 (57-140)||(5626686-5626769)
chr6 (73-140)||(10842518-10842585)
chr6 (69-115)||(6214571-6214617)
chr6 (69-127)||(7801158-7801216)
chr6 (93-143)||(7930288-7930338)
chr6 (69-163)||(20518308-20518402)
chr6 (69-163)||(32320671-32320764)
chr6 (76-150)||(1532214-1532290)
chr6 (69-118)||(7996380-7996429)
chr6 (69-118)||(8022372-8022421)
chr6 (69-151)||(8101058-8101142)
chr6 (73-106)||(11591876-11591909)
chr6 (69-126)||(14721241-14721298)
chr6 (80-117)||(16388246-16388283)
chr6 (72-161)||(25096388-25096477)
chr6 (69-118)||(26178683-26178732)
chr6 (73-106)||(26562709-26562742)
chr6 (69-118)||(31384928-31384977)
chr6 (72-153)||(31959132-31959213)
chr6 (69-118)||(32511668-32511717)
chr6 (71-140)||(33925039-33925108)
chr6 (62-118)||(403859-403915)
chr6 (73-153)||(2117050-2117129)
chr6 (73-161)||(2153893-2153981)
chr6 (69-153)||(10294080-10294164)
chr6 (69-153)||(18367810-18367893)
chr6 (13-140)||(24645466-24645594)
chr6 (47-107)||(29020931-29020991)
[»] scaffold0022 (2 HSPs)
scaffold0022 (29-163)||(90806-90940)
scaffold0022 (69-128)||(99891-99950)
[»] chr2 (65 HSPs)
chr2 (13-151)||(20242673-20242811)
chr2 (70-153)||(23717999-23718082)
chr2 (70-153)||(24105671-24105754)
chr2 (29-140)||(31808063-31808174)
chr2 (69-155)||(18421934-18422020)
chr2 (69-151)||(34784984-34785066)
chr2 (27-148)||(15972851-15972972)
chr2 (57-153)||(30404840-30404936)
chr2 (62-176)||(19536392-19536507)
chr2 (69-155)||(36756346-36756432)
chr2 (75-151)||(21616737-21616813)
chr2 (69-152)||(20539676-20539759)
chr2 (76-146)||(16069263-16069333)
chr2 (19-153)||(18840965-18841099)
chr2 (81-151)||(28412325-28412395)
chr2 (82-151)||(12940950-12941019)
chr2 (19-118)||(2438671-2438770)
chr2 (72-148)||(10547933-10548011)
chr2 (20-119)||(29176446-29176545)
chr2 (30-148)||(6940233-6940351)
chr2 (26-140)||(38117118-38117232)
chr2 (57-118)||(5367200-5367261)
chr2 (69-161)||(23058444-23058537)
chr2 (62-118)||(5473336-5473392)
chr2 (69-153)||(15657837-15657921)
chr2 (62-118)||(34691800-34691856)
chr2 (62-118)||(34714212-34714268)
chr2 (71-146)||(30527599-30527674)
chr2 (62-153)||(31018563-31018654)
chr2 (66-125)||(39279676-39279735)
chr2 (62-163)||(21624229-21624331)
chr2 (77-127)||(28677908-28677958)
chr2 (73-147)||(30717536-30717610)
chr2 (64-146)||(37558957-37559039)
chr2 (76-125)||(2665897-2665946)
chr2 (69-118)||(12668425-12668474)
chr2 (19-108)||(28596487-28596576)
chr2 (56-161)||(40361743-40361848)
chr2 (69-146)||(42832278-42832355)
chr2 (69-118)||(44860328-44860377)
chr2 (92-140)||(11670741-11670789)
chr2 (69-137)||(17776576-17776644)
chr2 (69-153)||(18276494-18276578)
chr2 (69-153)||(21091696-21091780)
chr2 (69-161)||(30335382-30335474)
chr2 (82-146)||(39323244-39323308)
chr2 (73-140)||(1239666-1239733)
chr2 (69-147)||(2331773-2331849)
chr2 (81-152)||(21782832-21782903)
chr2 (82-145)||(24894370-24894433)
chr2 (73-140)||(29970555-29970622)
chr2 (62-112)||(20922923-20922973)
chr2 (67-105)||(28524447-28524485)
chr2 (57-118)||(31284056-31284118)
chr2 (73-127)||(37411250-37411304)
chr2 (67-105)||(41843462-41843500)
chr2 (73-134)||(5891785-5891845)
chr2 (69-118)||(18622614-18622663)
chr2 (69-106)||(18889593-18889630)
chr2 (74-119)||(35449520-35449565)
chr2 (69-106)||(38355889-38355926)
chr2 (92-152)||(10254001-10254061)
chr2 (62-118)||(18255975-18256031)
chr2 (82-146)||(21374714-21374778)
chr2 (93-161)||(34337202-34337270)
[»] chr3 (82 HSPs)
chr3 (19-176)||(55401025-55401182)
chr3 (19-143)||(18426932-18427056)
chr3 (57-153)||(25093475-25093571)
chr3 (62-152)||(8383231-8383321)
chr3 (69-151)||(14216867-14216949)
chr3 (69-151)||(14222996-14223078)
chr3 (19-140)||(40993287-40993409)
chr3 (62-127)||(7928449-7928514)
chr3 (26-146)||(10954932-10955052)
chr3 (66-146)||(29508424-29508504)
chr3 (69-153)||(38731191-38731275)
chr3 (13-153)||(28917974-28918116)
chr3 (78-147)||(11493372-11493441)
chr3 (63-163)||(8587017-8587117)
chr3 (73-153)||(11658788-11658868)
chr3 (80-152)||(14840304-14840376)
chr3 (69-153)||(15796296-15796380)
chr3 (62-150)||(16000011-16000099)
chr3 (57-116)||(8789540-8789599)
chr3 (69-152)||(9800014-9800097)
chr3 (57-140)||(20503451-20503534)
chr3 (69-140)||(26290357-26290428)
chr3 (73-123)||(8930836-8930886)
chr3 (67-141)||(17005619-17005693)
chr3 (57-119)||(24633391-24633453)
chr3 (56-153)||(10335275-10335372)
chr3 (85-153)||(3164043-3164111)
chr3 (19-163)||(8842293-8842436)
chr3 (69-153)||(11665917-11666001)
chr3 (73-153)||(24205047-24205127)
chr3 (57-153)||(26492195-26492291)
chr3 (69-153)||(41961652-41961736)
chr3 (69-148)||(10268488-10268567)
chr3 (75-134)||(16192758-16192817)
chr3 (67-153)||(30184106-30184193)
chr3 (74-149)||(32804547-32804622)
chr3 (13-118)||(11251986-11252089)
chr3 (69-127)||(14209112-14209170)
chr3 (69-153)||(750620-750705)
chr3 (69-126)||(15314878-15314935)
chr3 (75-140)||(15544679-15544744)
chr3 (69-146)||(22774072-22774149)
chr3 (69-118)||(25948889-25948938)
chr3 (63-112)||(35222952-35223001)
chr3 (61-118)||(51206347-51206404)
chr3 (93-153)||(2620079-2620139)
chr3 (69-125)||(4201397-4201453)
chr3 (81-153)||(25064882-25064954)
chr3 (62-141)||(25775493-25775573)
chr3 (70-118)||(26508118-26508166)
chr3 (79-143)||(29112292-29112356)
chr3 (72-152)||(35312028-35312108)
chr3 (62-118)||(49505149-49505205)
chr3 (82-153)||(3610606-3610677)
chr3 (65-140)||(3962791-3962866)
chr3 (61-112)||(13414483-13414534)
chr3 (93-140)||(46191371-46191418)
chr3 (56-106)||(2941578-2941628)
chr3 (72-150)||(4990972-4991050)
chr3 (56-106)||(6780408-6780458)
chr3 (69-119)||(7614417-7614467)
chr3 (77-127)||(12704006-12704056)
chr3 (62-112)||(13845520-13845570)
chr3 (83-153)||(14979154-14979224)
chr3 (69-119)||(16789019-16789069)
chr3 (69-127)||(34910316-34910374)
chr3 (69-119)||(55212970-55213020)
chr3 (69-118)||(1509547-1509596)
chr3 (82-139)||(4987306-4987363)
chr3 (69-118)||(8039837-8039886)
chr3 (69-118)||(20691327-20691376)
chr3 (69-118)||(27505254-27505303)
chr3 (69-118)||(34185125-34185174)
chr3 (57-118)||(45451561-45451622)
chr3 (69-118)||(49651788-49651837)
chr3 (62-106)||(11507470-11507514)
chr3 (86-162)||(11610485-11610561)
chr3 (57-120)||(15505780-15505844)
chr3 (67-146)||(21720744-21720824)
chr3 (80-164)||(32429393-32429477)
chr3 (103-139)||(49765287-49765323)
chr3 (92-128)||(50916046-50916082)
[»] chr7 (78 HSPs)
chr7 (21-139)||(20549778-20549896)
chr7 (62-151)||(26733279-26733368)
chr7 (67-153)||(15902795-15902881)
chr7 (69-163)||(27945004-27945098)
chr7 (68-153)||(17851404-17851489)
chr7 (19-151)||(598183-598315)
chr7 (69-150)||(1433430-1433511)
chr7 (69-161)||(11061078-11061170)
chr7 (69-140)||(9408336-9408407)
chr7 (74-153)||(22868015-22868094)
chr7 (69-163)||(24339605-24339699)
chr7 (57-139)||(41020483-41020565)
chr7 (69-150)||(22602712-22602793)
chr7 (69-161)||(19206015-19206107)
chr7 (72-152)||(26329387-26329467)
chr7 (27-127)||(27093373-27093473)
chr7 (27-127)||(27184828-27184928)
chr7 (64-143)||(9482917-9482996)
chr7 (73-160)||(13770657-13770744)
chr7 (69-148)||(18013076-18013155)
chr7 (19-118)||(21880160-21880259)
chr7 (62-161)||(25481867-25481966)
chr7 (69-152)||(49107795-49107877)
chr7 (69-163)||(5235949-5236043)
chr7 (62-151)||(18213028-18213118)
chr7 (72-150)||(21140987-21141065)
chr7 (69-147)||(22484004-22484082)
chr7 (58-140)||(42720881-42720963)
chr7 (92-161)||(11722123-11722192)
chr7 (62-151)||(21826248-21826337)
chr7 (58-163)||(24105642-24105746)
chr7 (62-150)||(3721070-3721157)
chr7 (69-141)||(32308105-32308177)
chr7 (69-112)||(640127-640170)
chr7 (69-140)||(5835233-5835304)
chr7 (73-140)||(6630918-6630985)
chr7 (47-118)||(15680817-15680888)
chr7 (69-152)||(43027471-43027554)
chr7 (70-152)||(2425736-2425818)
chr7 (80-138)||(3938131-3938189)
chr7 (67-145)||(21828405-21828483)
chr7 (62-112)||(39138458-39138508)
chr7 (67-140)||(5233615-5233688)
chr7 (69-162)||(7438670-7438763)
chr7 (69-118)||(24146824-24146873)
chr7 (19-128)||(32287415-32287524)
chr7 (62-118)||(19213811-19213867)
chr7 (71-119)||(27732243-27732291)
chr7 (73-153)||(43249966-43250046)
chr7 (70-137)||(2948672-2948739)
chr7 (69-132)||(3991318-3991381)
chr7 (69-148)||(10042915-10042994)
chr7 (47-155)||(21864777-21864887)
chr7 (67-126)||(23128661-23128720)
chr7 (71-118)||(26033465-26033512)
chr7 (69-151)||(2034416-2034498)
chr7 (69-163)||(7328693-7328787)
chr7 (71-153)||(36297349-36297430)
chr7 (69-119)||(38143230-38143280)
chr7 (75-155)||(1334905-1334986)
chr7 (69-118)||(5409838-5409887)
chr7 (57-118)||(7197287-7197348)
chr7 (69-126)||(7758322-7758379)
chr7 (73-118)||(11665446-11665491)
chr7 (73-118)||(12278843-12278888)
chr7 (69-118)||(16341504-16341553)
chr7 (69-118)||(19992009-19992058)
chr7 (69-118)||(23849460-23849509)
chr7 (69-146)||(37742503-37742580)
chr7 (61-106)||(38629971-38630016)
chr7 (129-161)||(1656649-1656681)
chr7 (93-161)||(6028590-6028658)
chr7 (73-121)||(8239056-8239104)
chr7 (82-134)||(11831424-11831476)
chr7 (62-150)||(14077429-14077517)
chr7 (62-150)||(14387457-14387545)
chr7 (63-99)||(29769480-29769516)
chr7 (81-145)||(29787383-29787447)
[»] chr5 (68 HSPs)
chr5 (19-153)||(21191008-21191142)
chr5 (74-146)||(7175026-7175098)
chr5 (69-153)||(13287401-13287485)
chr5 (69-153)||(21522723-21522807)
chr5 (69-153)||(21533289-21533373)
chr5 (62-153)||(6247595-6247686)
chr5 (87-163)||(40000555-40000631)
chr5 (57-127)||(28588664-28588734)
chr5 (47-141)||(42893345-42893439)
chr5 (93-150)||(19552569-19552626)
chr5 (57-118)||(30502378-30502439)
chr5 (57-118)||(30542721-30542782)
chr5 (13-118)||(32630681-32630786)
chr5 (76-141)||(33035810-33035875)
chr5 (69-150)||(37328846-37328927)
chr5 (69-141)||(3966488-3966560)
chr5 (62-153)||(14422877-14422966)
chr5 (67-151)||(15410448-15410532)
chr5 (69-141)||(21351907-21351979)
chr5 (56-112)||(30099027-30099083)
chr5 (61-137)||(33178014-33178090)
chr5 (69-153)||(36642764-36642848)
chr5 (69-140)||(2436908-2436979)
chr5 (82-161)||(6326312-6326391)
chr5 (57-163)||(6770506-6770610)
chr5 (19-118)||(21576697-21576796)
chr5 (80-163)||(22013377-22013460)
chr5 (72-146)||(14674249-14674323)
chr5 (62-163)||(19820391-19820490)
chr5 (69-155)||(22423814-22423900)
chr5 (71-153)||(24906305-24906387)
chr5 (57-127)||(42029751-42029821)
chr5 (69-118)||(6471891-6471940)
chr5 (74-147)||(9449448-9449521)
chr5 (57-118)||(23012398-23012459)
chr5 (63-128)||(23220981-23221046)
chr5 (20-117)||(26312778-26312875)
chr5 (67-128)||(38749563-38749624)
chr5 (71-112)||(39758286-39758327)
chr5 (92-153)||(41558708-41558769)
chr5 (19-116)||(43564891-43564988)
chr5 (69-153)||(6401471-6401555)
chr5 (74-146)||(19168828-19168900)
chr5 (67-153)||(23015989-23016077)
chr5 (74-146)||(27144443-27144515)
chr5 (82-146)||(43001780-43001844)
chr5 (73-140)||(5467984-5468051)
chr5 (57-108)||(15884006-15884057)
chr5 (63-118)||(16203791-16203846)
chr5 (69-140)||(16374344-16374415)
chr5 (62-161)||(17123013-17123112)
chr5 (57-116)||(18421831-18421890)
chr5 (80-152)||(25888306-25888380)
chr5 (71-142)||(30098310-30098381)
chr5 (82-161)||(4105222-4105303)
chr5 (56-118)||(17177012-17177074)
chr5 (69-143)||(39698524-39698598)
chr5 (82-148)||(41995449-41995515)
chr5 (69-118)||(7677713-7677762)
chr5 (69-118)||(17925174-17925223)
chr5 (83-140)||(19438329-19438386)
chr5 (73-145)||(31264421-31264491)
chr5 (69-118)||(36838551-36838600)
chr5 (73-106)||(41091263-41091296)
chr5 (77-150)||(42488063-42488136)
chr5 (75-159)||(3751938-3752021)
chr5 (69-176)||(30135264-30135371)
chr5 (69-145)||(32444747-32444823)
[»] chr1 (92 HSPs)
chr1 (67-163)||(10572589-10572685)
chr1 (69-153)||(20157352-20157436)
chr1 (74-153)||(398772-398851)
chr1 (65-140)||(13997869-13997944)
chr1 (46-163)||(39130746-39130863)
chr1 (80-151)||(34298411-34298482)
chr1 (19-142)||(37598816-37598938)
chr1 (62-119)||(1864875-1864932)
chr1 (62-151)||(9709795-9709884)
chr1 (69-161)||(1486711-1486803)
chr1 (26-146)||(38078620-38078740)
chr1 (19-127)||(40258885-40258993)
chr1 (69-161)||(47989463-47989554)
chr1 (62-146)||(52903229-52903313)
chr1 (69-152)||(38503294-38503377)
chr1 (69-143)||(1815240-1815314)
chr1 (19-153)||(2896073-2896207)
chr1 (47-117)||(18337338-18337408)
chr1 (56-118)||(40181879-40181941)
chr1 (56-153)||(5898255-5898352)
chr1 (69-153)||(5376502-5376586)
chr1 (69-153)||(6427323-6427407)
chr1 (69-153)||(6612173-6612257)
chr1 (69-153)||(7918213-7918297)
chr1 (69-149)||(9629902-9629982)
chr1 (71-155)||(34257914-34257998)
chr1 (26-146)||(46348342-46348462)
chr1 (65-152)||(21378552-21378639)
chr1 (57-140)||(22881606-22881689)
chr1 (69-140)||(36878447-36878518)
chr1 (60-127)||(39953139-39953206)
chr1 (62-155)||(2288164-2288255)
chr1 (69-127)||(9828043-9828101)
chr1 (92-146)||(16812523-16812577)
chr1 (20-118)||(18190061-18190159)
chr1 (62-112)||(30749854-30749904)
chr1 (62-112)||(30771305-30771355)
chr1 (69-155)||(5944252-5944340)
chr1 (81-144)||(9033021-9033085)
chr1 (66-134)||(10233245-10233313)
chr1 (62-125)||(14332637-14332700)
chr1 (74-153)||(15323136-15323215)
chr1 (19-118)||(22515839-22515938)
chr1 (62-141)||(31672890-31672969)
chr1 (63-150)||(42359445-42359532)
chr1 (69-116)||(44482240-44482287)
chr1 (69-143)||(1704994-1705068)
chr1 (69-127)||(25361885-25361943)
chr1 (57-127)||(43492484-43492554)
chr1 (72-153)||(10577740-10577821)
chr1 (69-150)||(16927187-16927268)
chr1 (71-161)||(18471263-18471355)
chr1 (69-118)||(24577188-24577237)
chr1 (69-106)||(34371733-34371770)
chr1 (72-153)||(48450592-48450673)
chr1 (59-127)||(2784555-2784623)
chr1 (83-139)||(9449024-9449080)
chr1 (62-118)||(13436466-13436522)
chr1 (62-134)||(19637760-19637832)
chr1 (73-161)||(22794084-22794172)
chr1 (58-150)||(23636040-23636132)
chr1 (69-153)||(27471568-27471652)
chr1 (71-163)||(34315676-34315767)
chr1 (56-108)||(51410043-51410095)
chr1 (31-158)||(8842678-8842805)
chr1 (73-140)||(17831537-17831604)
chr1 (57-140)||(22907329-22907412)
chr1 (68-135)||(33230716-33230783)
chr1 (61-155)||(609452-609546)
chr1 (92-162)||(1262848-1262918)
chr1 (93-151)||(9103615-9103673)
chr1 (57-150)||(13011205-13011299)
chr1 (79-161)||(15641042-15641124)
chr1 (74-140)||(23622304-23622370)
chr1 (68-118)||(23738686-23738736)
chr1 (69-151)||(25272457-25272539)
chr1 (56-106)||(29163370-29163420)
chr1 (75-141)||(36905982-36906048)
chr1 (69-118)||(48148039-48148089)
chr1 (69-118)||(113307-113356)
chr1 (69-146)||(6415003-6415080)
chr1 (75-148)||(16252894-16252967)
chr1 (82-155)||(16297298-16297371)
chr1 (73-106)||(17705592-17705625)
chr1 (62-107)||(24462671-24462716)
chr1 (75-116)||(25098563-25098604)
chr1 (57-114)||(38742985-38743042)
chr1 (74-118)||(16164322-16164366)
chr1 (76-116)||(19324572-19324612)
chr1 (69-145)||(19562623-19562699)
chr1 (95-143)||(28268192-28268240)
chr1 (73-141)||(40285660-40285728)
[»] scaffold0027 (1 HSPs)
scaffold0027 (69-161)||(46647-46739)
[»] scaffold0223 (1 HSPs)
scaffold0223 (69-177)||(20121-20229)
[»] scaffold0652 (1 HSPs)
scaffold0652 (19-150)||(414-545)
[»] scaffold0053 (1 HSPs)
scaffold0053 (30-153)||(8771-8894)
[»] scaffold0020 (1 HSPs)
scaffold0020 (69-148)||(135314-135393)
[»] scaffold0083 (1 HSPs)
scaffold0083 (56-157)||(45519-45621)
[»] scaffold0050 (1 HSPs)
scaffold0050 (47-145)||(70259-70357)
[»] scaffold0018 (2 HSPs)
scaffold0018 (69-153)||(178820-178905)
scaffold0018 (82-151)||(192264-192333)
[»] scaffold0171 (2 HSPs)
scaffold0171 (69-153)||(23393-23477)
scaffold0171 (69-154)||(23482-23568)
[»] scaffold0003 (1 HSPs)
scaffold0003 (69-153)||(241567-241651)
[»] scaffold0021 (1 HSPs)
scaffold0021 (70-153)||(130455-130538)
[»] scaffold0110 (1 HSPs)
scaffold0110 (67-144)||(28832-28909)
[»] scaffold0168 (1 HSPs)
scaffold0168 (71-151)||(21018-21098)
[»] scaffold0122 (1 HSPs)
scaffold0122 (69-153)||(8639-8723)
[»] scaffold0103 (1 HSPs)
scaffold0103 (82-146)||(51791-51855)
[»] scaffold0306 (1 HSPs)
scaffold0306 (69-163)||(13363-13457)
[»] scaffold0152 (1 HSPs)
scaffold0152 (69-163)||(21870-21964)
[»] scaffold0136 (1 HSPs)
scaffold0136 (69-151)||(3851-3933)
[»] scaffold0036 (1 HSPs)
scaffold0036 (69-127)||(9749-9807)
[»] scaffold0085 (1 HSPs)
scaffold0085 (73-146)||(26373-26446)
[»] scaffold0246 (1 HSPs)
scaffold0246 (26-153)||(19549-19680)
[»] scaffold0007 (1 HSPs)
scaffold0007 (73-153)||(225274-225354)
[»] scaffold0722 (1 HSPs)
scaffold0722 (56-143)||(7021-7108)
[»] scaffold0123 (1 HSPs)
scaffold0123 (71-106)||(44529-44564)
[»] scaffold0044 (1 HSPs)
scaffold0044 (70-117)||(53189-53236)
[»] scaffold0008 (1 HSPs)
scaffold0008 (69-148)||(263374-263453)
[»] scaffold1300 (1 HSPs)
scaffold1300 (69-115)||(586-632)
[»] scaffold0039 (1 HSPs)
scaffold0039 (69-127)||(84975-85033)
[»] scaffold0025 (1 HSPs)
scaffold0025 (69-142)||(23753-23827)
[»] scaffold0361 (1 HSPs)
scaffold0361 (82-127)||(14529-14574)
[»] scaffold0011 (1 HSPs)
scaffold0011 (69-118)||(17751-17800)
[»] scaffold0004 (1 HSPs)
scaffold0004 (82-143)||(92790-92851)
[»] scaffold0512 (1 HSPs)
scaffold0512 (13-89)||(4982-5058)
[»] scaffold0116 (1 HSPs)
scaffold0116 (69-153)||(9871-9955)
[»] scaffold0049 (1 HSPs)
scaffold0049 (69-160)||(63738-63830)


Alignment Details
Target: chr8 (Bit Score: 161; Significance: 6e-86; HSPs: 65)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 13 - 229
Target Start/End: Complemental strand, 3677899 - 3677683
Alignment:
Q  13 agcagagacacttctcggattaggtgtgtcttcatgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaa 112  Q
    ||||| ||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  3677899 agcagtgacacttttcggattaggcgtgtcttcgtgtcgaactcgtgttgtgtccaacaccgatacatataattacatagaattatgtgattttttaaaa 3677800  T
Q  113 ttattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccgtatatttgctacataggatgaaagtaatttgaatgtttcgattaaatgcaac 212  Q
    |||||||| |||||||||||||||| ||||||||||||| ||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||    
T  3677799 ttattaattgtgtcgatgtgtcagtatccgtgtcgtgtctgatatccgtatatgtcctacataggatgaaactaatttgaatgtttcgattaaatgcaac 3677700  T
Q  213 atgcagcatgttctttg 229  Q
    ||||| || ||||||||    
T  3677699 atgcaacaagttctttg 3677683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 69 - 140
Target Start/End: Original strand, 4786340 - 4786411
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtc 140  Q
    |||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||  |||||||||||    
T  4786340 acaccgacacatataattacactgaattatgtgattttcttaaattattaatggtgtcggcgtgtcagtgtc 4786411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 28384996 - 28385077
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgt 150  Q
    |||||||||||||||||||||| |||||||| ||||| || | |||||||| ||||||| | ||||||||||||||||||||    
T  28384996 acaccgacacatataattacactgaattatgagatttattcatattattaacggtgtcggtatgtcagtgtccgtgtcgtgt 28385077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 146
Target Start/End: Original strand, 36450700 - 36450833
Alignment:
Q  13 agcagagacacttctcggattaggtgtgtcttcatgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaa 112  Q
    |||| ||||||| ||||||||||| ||||| |  ||||| || || || |||||| ||||| |||| | ||||||||| ||||| ||||||||||| |||    
T  36450700 agcacagacactcctcggattaggcgtgtcctggtgtcggacacgcgtcgtgtccgacacctacacttgtaattacactgaattctgtgattttttcaaa 36450799  T
Q  113 ttattaatggtgtcgatgtgtcagtgtccgtgtc 146  Q
    |||||| | ||||||  |||||||||||||||||    
T  36450800 ttattagttgtgtcggcgtgtcagtgtccgtgtc 36450833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 61 - 143
Target Start/End: Complemental strand, 34897150 - 34897068
Alignment:
Q  61 tgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgt 143  Q
    ||||||| ||| |||||||||||||||||| ||||||||||||||| | |||||||||  |||||||| ||||| ||||||||    
T  34897150 tgtgtccgacatcgacacatataattacactgaattatgtgattttctcaaattattagcggtgtcgacgtgtctgtgtccgt 34897068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 67 - 150
Target Start/End: Complemental strand, 11803318 - 11803235
Alignment:
Q  67 caacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgt 150  Q
    ||||||| |||||||||||||||| ||||||||||||||| | ||||||||||  |||||  ||| ||||||| ||||||||||    
T  11803318 caacaccaacacatataattacactgaattatgtgattttcttaaattattaacagtgtcagtgtatcagtgttcgtgtcgtgt 11803235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 62 - 153
Target Start/End: Complemental strand, 20873133 - 20873042
Alignment:
Q  62 gtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    |||||| |||||||||| | |||||||||  |||||||||||||||| |||||||||    |||||  ||||||||||||||||||||||||    
T  20873133 gtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattatctatgtcggcgtgtcagtgtccgtgtcgtgtccg 20873042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 75 - 150
Target Start/End: Complemental strand, 36934721 - 36934646
Alignment:
Q  75 acacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgt 150  Q
    |||||||||||||||  |||||||||||||||||  ||||||||  |||||||| |||| ||||||||||||||||    
T  36934721 acacatataattacaatgaattatgtgattttttcgaattattagcggtgtcgacgtgttagtgtccgtgtcgtgt 36934646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 69 - 143
Target Start/End: Original strand, 15816131 - 15816205
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgt 143  Q
    |||||||||| |||||||||||  |||||||||||||||| ||||||||| | ||||||  ||||||||||||||    
T  15816131 acaccgacacttataattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgt 15816205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 63 - 161
Target Start/End: Original strand, 18170478 - 18170576
Alignment:
Q  63 tgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccgt 161  Q
    ||||| |||||||||  | ||||||||  ||||||||| ||||||| ||||| ||||| ||||||  |||||||||||||||||||| ||| |||||||    
T  18170478 tgtccgacaccgacatttgtaattacattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtccgtgtcgtgaccggtatccgt 18170576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 63 - 161
Target Start/End: Original strand, 18634046 - 18634144
Alignment:
Q  63 tgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccgt 161  Q
    ||||| |||||||||  | ||||||||  ||||||||| ||||||| ||||| ||||| ||||||  |||||||||||||||||||| ||| |||||||    
T  18634046 tgtccgacaccgacatttgtaattacattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtccgtgtcgtgaccggtatccgt 18634144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 85 - 163
Target Start/End: Complemental strand, 28642449 - 28642371
Alignment:
Q  85 ttacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccgtat 163  Q
    |||||| ||||||||| | ||||| ||||||||||  ||||| |||||||| ||||||||||||||||||| |||||||    
T  28642449 ttacactgaattatgtaaatttttcaaattattaaccgtgtcaatgtgtcattgtccgtgtcgtgtccgatgtccgtat 28642371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 25192350 - 25192443
Alignment:
Q  70 caccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccgtat 163  Q
    ||||||||| |||||||| || ||||||||| | ||||| |||||||||   ||||||  |||||||||||||| ||||||||||| |||||||    
T  25192350 caccgacacttataattatactgaattatgtcactttttcaaattattagctgtgtcggcgtgtcagtgtccgtatcgtgtccgatgtccgtat 25192443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 67 - 127
Target Start/End: Complemental strand, 22493553 - 22493493
Alignment:
Q  67 caacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcg 127  Q
    ||||||||||| |||| ||||||| ||||||||||||||||||||||||| | ||||||||    
T  22493553 caacaccgacatatatgattacactgaattatgtgattttttaaaattatcagtggtgtcg 22493493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 153
Target Start/End: Complemental strand, 22652033 - 22651949
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    |||||||||| | |||||| |  ||||||||||||||||| |||||||||   ||||||  ||||||||||||||||||||||||    
T  22652033 acaccgacacttgtaattatattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccg 22651949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 153
Target Start/End: Original strand, 29510306 - 29510390
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    |||||||||| | |||||| || ||||| ||||||||||| |||||||||   ||||||  ||||||||||||||||||||||||    
T  29510306 acaccgacacttgtaattatactgaattttgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccg 29510390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 69 - 152
Target Start/End: Original strand, 2572058 - 2572141
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtcc 152  Q
    |||||||||| | |||||||||  |||||||||||||||| |||||||||   ||||||| ||||| || ||||||||||||||    
T  2572058 acaccgacacttgtaattacactaaattatgtgattttttcaaattattaggtgtgtcgacgtgtcggtatccgtgtcgtgtcc 2572141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 57 - 152
Target Start/End: Original strand, 33405374 - 33405469
Alignment:
Q  57 gtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtcc 152  Q
    |||| |||||| ||||||||||||||||||||||  ||||||||| |||| | ||||||||||  | | |  ||||||||||||| ||||||||||    
T  33405374 gtgtcgtgtccgacaccgacacatataattacactaaattatgtgtttttctcaaattattaacagggccagtgtgtcagtgtccatgtcgtgtcc 33405469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 127
Target Start/End: Complemental strand, 7658524 - 7658462
Alignment:
Q  65 tccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcg 127  Q
    ||||||||||||| |||||||||||| ||||||||| ||||| | ||||||||| ||||||||    
T  7658524 tccaacaccgacaaatataattacactgaattatgtaattttctcaaattattagtggtgtcg 7658462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 119
Target Start/End: Original strand, 11927088 - 11927138
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaa 119  Q
    |||||||||||||||||||||| ||||||||||||||| | ||||||||||    
T  11927088 acaccgacacatataattacactgaattatgtgattttatcaaattattaa 11927138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 163
Target Start/End: Original strand, 4673440 - 4673521
Alignment:
Q  82 taattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccgtat 163  Q
    ||||||||| ||||| | ||||||||| |||||||||   ||||||  ||||||||||| |||||||||||||| |||||||    
T  4673440 taattacactgaattttatgattttttcaaattattatctgtgtcggcgtgtcagtgtctgtgtcgtgtccgatgtccgtat 4673521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 153
Target Start/End: Original strand, 7472517 - 7472602
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcg-atgtgtcagtgtccgtgtcgtgtccg 153  Q
    |||| |||||||||||||||||  | ||||||||||| || ||||||||| |||||||| || ||||||| ||||||| |||||||    
T  7472517 acacagacacatataattacactaatttatgtgatttctttaaattattagtggtgtcgaatatgtcagtttccgtgttgtgtccg 7472602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 11944722 - 11944641
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgt 150  Q
    |||||||||||||||||||||| || |||||||||||| | ||||||||||  ||||||  |||| ||  ||||||||||||    
T  11944722 acaccgacacatataattacactgagttatgtgattttatcaaattattaacagtgtcggcgtgttagcatccgtgtcgtgt 11944641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 146
Target Start/End: Complemental strand, 14134756 - 14134679
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtc 146  Q
    ||||||||| |||||||||||| ||||||||||||||| | ||||||||| |  |||||| ||||| ||||| |||||    
T  14134756 acaccgacatatataattacactgaattatgtgattttctcaaattattagtattgtcgacgtgtccgtgtcggtgtc 14134679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 140
Target Start/End: Original strand, 20679375 - 20679468
Alignment:
Q  47 tgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtc 140  Q
    ||||| || ||||||| |||  |||||||||| ||||||||||| ||| ||||||||||| | |||||||||  ||||||||  ||||||||||    
T  20679375 tgtcggacacgtgttgcgtctgacaccgacacttataattacactgaactatgtgattttctcaaattattaggggtgtcgacatgtcagtgtc 20679468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 163
Target Start/End: Original strand, 24362209 - 24362298
Alignment:
Q  74 gacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccgtat 163  Q
    ||||||||||||||||| ||||||||||||| | | |||||||||  |||||||  ||||| ||||| ||||||| |||| | |||||||    
T  24362209 gacacatataattacactgaattatgtgattctctcaaattattagcggtgtcggcgtgtcggtgtctgtgtcgtatccggtgtccgtat 24362298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 153
Target Start/End: Complemental strand, 27213601 - 27213520
Alignment:
Q  72 ccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    ||||||||||||||||||  ||||||||||||||| | |||||||||   ||||||  ||||| || |||||||||||||||    
T  27213601 ccgacacatataattacagtgaattatgtgattttctgaaattattagcagtgtcggcgtgtctgtatccgtgtcgtgtccg 27213520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 4948716 - 4948660
Alignment:
Q  62 gtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||| |||||||||| | ||||||||| ||||||||||||||||| |||||||||    
T  4948716 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 4948660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 13844591 - 13844647
Alignment:
Q  62 gtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||| ||||||||||||||||||||||  |||||||||||||| | |||||||||    
T  13844591 gtgtccgacaccgacacatataattacactcaattatgtgattttctcaaattatta 13844647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 153
Target Start/End: Complemental strand, 24669490 - 24669406
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    |||||||||| | ||||||||| ||||||||| ||||  | |||||||||| ||||||   ||||||||||| ||||||||||||    
T  24669490 acaccgacacttgtaattacactgaattatgtaatttcctcaaattattaacggtgtcagcgtgtcagtgtctgtgtcgtgtccg 24669406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 146
Target Start/End: Original strand, 31109514 - 31109597
Alignment:
Q  63 tgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtc 146  Q
    ||||| |||| |||||||||| ||| || ||||| | ||||||| | |||||||||| |||||||  |||||||||||||||||    
T  31109514 tgtccgacactgacacatatagttagactgaattgtttgattttctcaaattattaacggtgtcggcgtgtcagtgtccgtgtc 31109597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 151
Target Start/End: Original strand, 41838148 - 41838207
Alignment:
Q  92 gaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtc 151  Q
    ||||||||||||||||| |||||||||   ||||||| |||||||||||||| |||||||    
T  41838148 gaattatgtgatttttttaaattattagctgtgtcgacgtgtcagtgtccgtatcgtgtc 41838207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 153
Target Start/End: Original strand, 926768 - 926874
Alignment:
Q  47 tgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtc 146  Q
    ||||| || ||||| | |||| |||||||||| ||||||||||| |||  ||| |||||| | |||||||||   |||| |  |||||||||||||||||    
T  926768 tgtcggacacgtgtcgcgtccgacaccgacacttataattacactgaacaatgagattttctcaaattattaggagtgttggcgtgtcagtgtccgtgtc 926867  T
Q  147 gtgtccg 153  Q
    |||||||    
T  926868 gtgtccg 926874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 3025621 - 3025559
Alignment:
Q  56 cgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    ||||| |||||| |||| ||||| ||||||||||| ||||||||||||||| | |||||||||    
T  3025621 cgtgtcgtgtccgacactgacacctataattacactgaattatgtgattttctcaaattatta 3025559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 155
Target Start/End: Complemental strand, 8343373 - 8343287
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgat 155  Q
    |||| ||||| | |||||||||  |||||||||||||||| |||||||||    ||||| |||||| ||||| ||||||||||||||    
T  8343373 acactgacacttgtaattacactaaattatgtgattttttcaaattattagctatgtcggtgtgtcggtgtcagtgtcgtgtccgat 8343287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 151
Target Start/End: Original strand, 24413554 - 24413644
Alignment:
Q  62 gtgtccaacaccgacacatataattacacagaattatgtgatttttt-aaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtc 151  Q
    |||||| |||| ||||| ||||||||| | |||||||||  |||| | ||||||||||| ||||||  | |||||||||||||||||||||    
T  24413554 gtgtccgacactgacacttataattaccctgaattatgtatttttctcaaaattattaacggtgtcagtatgtcagtgtccgtgtcgtgtc 24413644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 155
Target Start/End: Complemental strand, 42874591 - 42874493
Alignment:
Q  57 gtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgat 155  Q
    |||||||||||||||| ||||| | | ||||||  ||||||||| ||||| | ||| | |||| |||||||| ||||| ||||  ||||||||||||||    
T  42874591 gtgttgtgtccaacactgacacttgtgattacattgaattatgtcattttctcaaaatgttaacggtgtcgacgtgtccgtgttagtgtcgtgtccgat 42874493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 9414840 - 9414956
Alignment:
Q  31 attaggtgtgtcttcatgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatg 130  Q
    |||||| ||||||| || ||| || ||||| |||||  ||||| |||| ||||||| ||| ||||||||||||| |||  ||||||||||  ||||| |     
T  9414840 attaggcgtgtcttgat-tcggacacgtgtcgtgtctgacaccaacacttataattgcactgaattatgtgattatttttaattattaattatgtcggta 9414938  T
Q  131 tgtcagtgtccgtgtcgt 148  Q
    |||||||||| |||||||    
T  9414939 tgtcagtgtctgtgtcgt 9414956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 146
Target Start/End: Complemental strand, 18964234 - 18964157
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtc 146  Q
    |||||||||||||||||||||  ||||||||||||||| |||||  |||| | || | || ||||||||||| |||||    
T  18964234 acaccgacacatataattacattgaattatgtgattttctaaaaaaattagttgtcttgacgtgtcagtgtcagtgtc 18964157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 118
Target Start/End: Complemental strand, 25566898 - 25566849
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||||||| | ||||||||| ||||||||||||||||| |||||||||    
T  25566898 acaccgacacttgtaattacactgaattatgtgattttttcaaattatta 25566849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 106
Target Start/End: Original strand, 26902177 - 26902214
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgatttt 106  Q
    |||||||||||||||||||||| |||||||||||||||    
T  26902177 acaccgacacatataattacactgaattatgtgatttt 26902214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 119
Target Start/End: Original strand, 31580086 - 31580179
Alignment:
Q  26 ctcggattaggtgtgtcttcatgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaa 119  Q
    |||||||||||||||| |   ||||||||  |||| | |||| ||| |||||| |||||||||||  |||||||||||||| | ||||||||||    
T  31580086 ctcggattaggtgtgtttcggtgtcgaacatgtgtcgcgtccgacatcgacacctataattacactcaattatgtgattttcttaaattattaa 31580179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 40332261 - 40332200
Alignment:
Q  56 cgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattatt 117  Q
    ||||| |||||| |||||||||| | ||||||||| ||||||||||||||| | ||||||||    
T  40332261 cgtgtcgtgtcccacaccgacacttgtaattacactgaattatgtgattttctcaaattatt 40332200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 153
Target Start/End: Original strand, 4298888 - 4298972
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    |||||||||| | ||||||||   |||||||||||||||| ||||||||||  ||||||  |||| ||| || ||||||||||||    
T  4298888 acaccgacacttgtaattacattaaattatgtgattttttcaaattattaactgtgtcggcgtgttagtatctgtgtcgtgtccg 4298972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 105
Target Start/End: Complemental strand, 8847313 - 8847277
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattt 105  Q
    |||||||||||||||||||||| ||||||||||||||    
T  8847313 acaccgacacatataattacactgaattatgtgattt 8847277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 163
Target Start/End: Complemental strand, 13203688 - 13203604
Alignment:
Q  79 atataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccgtat 163  Q
    |||||||||||| ||||||||| ||||| | ||||||||| || ||| || || |||||||  |||||||||| | |||||||||    
T  13203688 atataattacactgaattatgtaattttctcaaattattagtgttgttgacgtatcagtgtttgtgtcgtgtcgggtatccgtat 13203604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 118
Target Start/End: Original strand, 31236580 - 31236628
Alignment:
Q  70 caccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    ||||||||||||||||||||  ||||||||||||||| | |||||||||    
T  31236580 caccgacacatataattacattgaattatgtgattttctcaaattatta 31236628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 118
Target Start/End: Complemental strand, 34223002 - 34222955
Alignment:
Q  71 accgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    ||||||||||||||||||||  |||||||||||||| | |||||||||    
T  34223002 accgacacatataattacacttaattatgtgattttattaaattatta 34222955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 4611590 - 4611528
Alignment:
Q  70 caccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtg 132  Q
    |||||| |||||||||||||| ||||||||| ||||| | |||||||||  ||||||| ||||    
T  4611590 caccgagacatataattacactgaattatgttattttctcaaattattagcggtgtcggtgtg 4611528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 155
Target Start/End: Complemental strand, 26434293 - 26434151
Alignment:
Q  13 agcagagacacttctcggattaggtgtgtcttcatgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaa 112  Q
    |||| |||||||||| | |||| |||||| ||  ||| | || ||| ||||||||||||||||||| | |||||| |  ||||||||||||||| | |||    
T  26434293 agcacagacacttcttgaattatgtgtgttttggtgttggacacgtattgtgtccaacaccgacacttttaattatattgaattatgtgattttctcaaa 26434194  T
Q  113 ttattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgat 155  Q
     ||||| || ||| |  || || |||||| | |||||||||||    
T  26434193 ctattagtgatgtaggcgtatcggtgtccatatcgtgtccgat 26434151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 154
Target Start/End: Complemental strand, 28745532 - 28745470
Alignment:
Q  92 gaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccga 154  Q
    ||||||||||| ||||| |||||||||   |||||||||| ||| | ||||||||||||||||    
T  28745532 gaattatgtgaatttttcaaattattagcagtgtcgatgtatcattatccgtgtcgtgtccga 28745470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 163
Target Start/End: Complemental strand, 31557053 - 31556960
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccgtat 163  Q
    ||||||| || | ||||||||| |||||||||||| |||| ||||||||||  ||||||  ||||||||| || |||| |||||| | |||||||    
T  31557053 acaccgaaacttgtaattacactgaattatgtgat-ttttcaaattattaactgtgtcggcgtgtcagtgaccatgtcatgtccggtgtccgtat 31556960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 39954282 - 39954352
Alignment:
Q  70 caccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtc 140  Q
    ||||| |||||||||||||||  |||||||||||||| | |||||||||  |||||||  ||||| |||||    
T  39954282 caccgtcacatataattacactaaattatgtgattttctcaaattattagcggtgtcggcgtgtcggtgtc 39954352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 128
Target Start/End: Original strand, 4122249 - 4122310
Alignment:
Q  67 caacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcga 128  Q
    |||||||||||||||||||||||  ||||||| | ||||| |  ||||||||||| ||||||    
T  4122249 caacaccgacacatataattacaatgaattatataattttatctaattattaatgatgtcga 4122310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 118
Target Start/End: Complemental strand, 8343029 - 8342980
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||||||| | |||||||||  |||||||||||||||| |||||||||    
T  8343029 acaccgacacttgtaattacactaaattatgtgattttttcaaattatta 8342980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 118
Target Start/End: Original strand, 12606831 - 12606880
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||||||||||||||||||  ||||||| ||||||| | |||||||||    
T  12606831 acaccgacacatataattacattgaattatatgattttctcaaattatta 12606880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 118
Target Start/End: Complemental strand, 12985457 - 12985400
Alignment:
Q  61 tgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    ||||||| ||||||||| |||| ||||||  ||||||||||||||| | |||||||||    
T  12985457 tgtgtccgacaccgacatatatgattacattgaattatgtgattttctcaaattatta 12985400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 153
Target Start/End: Original strand, 13436989 - 13437050
Alignment:
Q  92 gaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    ||||||||||||||||| |||||||||   ||||||  |||||||||||| |||| ||||||    
T  13436989 gaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcatgtccg 13437050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 153
Target Start/End: Complemental strand, 29358034 - 29357949
Alignment:
Q  69 acaccgacacatataattacacagaattatgtga-ttttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    |||||||||||||||| ||||   |||||||||| ||||| |||||||||||  || |||| || ||||||||  |||||||||||    
T  29358034 acaccgacacatataaatacattaaattatgtgagtttttcaaaattattaacagtatcgacgtatcagtgtctatgtcgtgtccg 29357949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 140
Target Start/End: Complemental strand, 29519254 - 29519181
Alignment:
Q  67 caacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtc 140  Q
    |||||| | ||||| | ||||||  ||||||| |||||||||||||||||||  ||||| || |||||||||||    
T  29519254 caacactgtcacatgttattacattgaattatatgattttttaaaattattatcggtgttgacgtgtcagtgtc 29519181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 118
Target Start/End: Original strand, 33382021 - 33382070
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||||||||||||||||| | ||||||||| ||||| | |||||||||    
T  33382021 acaccgacacatataattactctgaattatgtcattttcttaaattatta 33382070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 138
Target Start/End: Complemental strand, 24613584 - 24613509
Alignment:
Q  62 gtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtg 138  Q
    |||||| |||||||||| | |||||||||  ||||||||||| |||| |||||||||   |||||| ||||||||||    
T  24613584 gtgtccgacaccgacacttgtaattacacttaattatgtgat-ttttcaaattattagctgtgtcggtgtgtcagtg 24613509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 29776085 - 29776013
Alignment:
Q  77 acatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtg 149  Q
    ||||||||||| || |||||| |||||||| | |||||||||   |||||||  ||||| |||||||||||||    
T  29776085 acatataattatactgaattacgtgattttctcaaattattagcagtgtcgacttgtcaatgtccgtgtcgtg 29776013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 153
Target Start/End: Original strand, 34451039 - 34451123
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    |||||||||||||||||||||| | ||| |||||||||  ||||  ||||   |||||  |||||| ||| ||||||||||||||    
T  34451039 acaccgacacatataattacactgcattttgtgattttcaaaaaaaattagctgtgtcagtgtgtcggtgcccgtgtcgtgtccg 34451123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 106
Target Start/End: Original strand, 43737806 - 43737850
Alignment:
Q  62 gtgtccaacaccgacacatataattacacagaattatgtgatttt 106  Q
    |||||| |||||||||||||||||||||| | ||| |||||||||    
T  43737806 gtgtccgacaccgacacatataattacactgtattttgtgatttt 43737850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 7e-30; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 24 - 146
Target Start/End: Original strand, 40179593 - 40179715
Alignment:
Q  24 ttctcggattaggtgtgtcttcatgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggt 123  Q
    ||||||||||||| ||||| |  ||||||||  |||| |||||| |||||||| ||||||||||||| ||||||||||||||||| ||| ||||||||||    
T  40179593 ttctcggattaggcgtgtcatggtgtcgaacatgtgtcgtgtccgacaccgacgcatataattacactgaattatgtgattttttcaaactattaatggt 40179692  T
Q  124 gtcgatgtgtcagtgtccgtgtc 146  Q
    ||| | |||||||||||||||||    
T  40179693 gtcaacgtgtcagtgtccgtgtc 40179715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 163
Target Start/End: Original strand, 12895227 - 12895370
Alignment:
Q  20 acacttctcggattaggtgtgtcttcatgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaa 119  Q
    ||||| ||||||||||| |||||   |||||| |  | ||| |||||| |||||||||| |||||||||||| |||||||||||||||| |||||||||     
T  12895227 acactcctcggattaggcgtgtcccgatgtcggatacatgtcgtgtccgacaccgacacttataattacacaaaattatgtgattttttcaaattattat 12895326  T
Q  120 tggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccgtat 163  Q
    | ||||||  |||||| ||| |||||||| |||| | |||||||    
T  12895327 ttgtgtcggcgtgtcattgttcgtgtcgtatccggtgtccgtat 12895370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 76 - 151
Target Start/End: Original strand, 22440609 - 22440684
Alignment:
Q  76 cacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtc 151  Q
    ||||||||||||||| ||||||||||||||| | |||||||||| ||||||||||| ||||||||| |||||||||    
T  22440609 cacatataattacactgaattatgtgattttctcaaattattaacggtgtcgatgtatcagtgtccatgtcgtgtc 22440684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 153
Target Start/End: Original strand, 23292938 - 23293072
Alignment:
Q  19 gacacttctcggattaggtgtgtcttcatgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||| ||||||||||| |||||    ||||| || ||||| |||||| |||||||||| | |||||| || ||||||||||||||||| |||||||||    
T  23292938 gacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattatactgaattatgtgattttttcaaattatta 23293037  T
Q  119 atggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
       ||||||  |||||| |||||||||||||||||    
T  23293038 gctgtgtcggcgtgtcattgtccgtgtcgtgtccg 23293072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 69 - 152
Target Start/End: Original strand, 5775360 - 5775445
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtc---agtgtccgtgtcgtgtcc 152  Q
    ||||||||||||||||||||||  |||||||||||||| | |||||||||||||||||| ||||||   ||||||||||||||||||    
T  5775360 acaccgacacatataattacacttaattatgtgattttctcaaattattaatggtgtcg-tgtgtcagtagtgtccgtgtcgtgtcc 5775445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 75 - 153
Target Start/End: Complemental strand, 36635375 - 36635297
Alignment:
Q  75 acacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    |||||||||||||||| ||||||||||||||| | ||||||||| |||||| |  ||||||||||||| ||||||||||    
T  36635375 acacatataattacactgaattatgtgattttctcaaattattagtggtgttggcgtgtcagtgtccgagtcgtgtccg 36635297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 82 - 151
Target Start/End: Original strand, 27706192 - 27706261
Alignment:
Q  82 taattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtc 151  Q
    |||||||||  |||||||||||||||| ||||||||||| ||||||| |||||||||||| |||||||||    
T  27706192 taattacactaaattatgtgatttttttaaattattaattgtgtcgacgtgtcagtgtccctgtcgtgtc 27706261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 143
Target Start/End: Complemental strand, 903971 - 903905
Alignment:
Q  77 acatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgt 143  Q
    |||||||||||||| ||||||||||||||| | |||||||||| |||| || |||||||||||||||    
T  903971 acatataattacactgaattatgtgattttctcaaattattaacggtgccggtgtgtcagtgtccgt 903905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 54580012 - 54580074
Alignment:
Q  56 cgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    ||||| |||||| |||||||||| ||||||||||| ||||||||||||||||| |||||||||    
T  54580012 cgtgtcgtgtccgacaccgacacttataattacactgaattatgtgattttttcaaattatta 54580074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 57 - 118
Target Start/End: Complemental strand, 29205513 - 29205452
Alignment:
Q  57 gtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||| ||||||||||||||||| | ||||||||| ||||||||||||||||| |||||||||    
T  29205513 gtgtcgtgtccaacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 29205452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 74 - 155
Target Start/End: Original strand, 44081584 - 44081665
Alignment:
Q  74 gacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgat 155  Q
    ||||||||||||||||   |||||| ||||||||| |||||||||| | | ||| ||||||||||||| |||||||||||||    
T  44081584 gacacatataattacattaaattatatgattttttcaaattattaacgatatcggtgtgtcagtgtccttgtcgtgtccgat 44081665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 153
Target Start/End: Original strand, 35157987 - 35158071
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    |||||||||| |||||||||||  |||||||||||||||  ||||||||| | | ||||  |||||||||||||||| |||||||    
T  35157987 acaccgacacttataattacactaaattatgtgatttttccaaattattagttgcgtcggcgtgtcagtgtccgtgttgtgtccg 35158071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 71 - 146
Target Start/End: Original strand, 26504303 - 26504378
Alignment:
Q  71 accgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtc 146  Q
    |||||||||||||||||||| ||| ||| ||||||| | |||||||||   |||||||||| ||||||||||||||    
T  26504303 accgacacatataattacactgaactatttgattttcttaaattattagcagtgtcgatgtttcagtgtccgtgtc 26504378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 151
Target Start/End: Complemental strand, 19482725 - 19482643
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtc 151  Q
    ||||| |||| | ||||||||| |||||||||||| |||| ||||||||| | ||||||  ||||||||||| ||||||||||    
T  19482725 acaccaacacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgtc 19482643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 153
Target Start/End: Complemental strand, 49431096 - 49430998
Alignment:
Q  56 cgtgttgtgtccaacaccgacacatataattacacagaattatgtgatt-ttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    ||||| |||||| |||||||||| | ||||||||| ||||||||||||| |||| |||||||||   ||||||  |||||| |||||| ||||||||||    
T  49431096 cgtgtcgtgtccgacaccgacacttttaattacactgaattatgtgatttttttcaaattattagctgtgtcggcgtgtcactgtccgagtcgtgtccg 49430998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 146
Target Start/End: Complemental strand, 13783338 - 13783261
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtc 146  Q
    |||||| ||||||||||||||| ||||| |||||| || | |||| ||||  ||||||| ||||||||||||||||||    
T  13783338 acaccggcacatataattacactgaattttgtgatcttctcaaataattagcggtgtcggtgtgtcagtgtccgtgtc 13783261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 151
Target Start/End: Original strand, 11651159 - 11651218
Alignment:
Q  92 gaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtc 151  Q
    ||||||||||||||||| |||||||||   ||||||| |||||||||||||| |||||||    
T  11651159 gaattatgtgatttttttaaattattagctgtgtcgacgtgtcagtgtccgtatcgtgtc 11651218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 153
Target Start/End: Original strand, 12797333 - 12797423
Alignment:
Q  62 gtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    |||||| |||||||||| | ||||||||| ||||||||||| ||||| ||||||||| |  || ||  ||||||||||||||||||| ||||    
T  12797333 gtgtccgacaccgacacttgtaattacactgaattatgtga-tttttcaaattattagttttgccggcgtgtcagtgtccgtgtcgtatccg 12797423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 148
Target Start/End: Complemental strand, 40742644 - 40742569
Alignment:
Q  73 cgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgt 148  Q
    ||||||||||||||||||   ||||| ||||||| | ||||||||||||||||||  || ||| ||||||||||||    
T  40742644 cgacacatataattacactagattatatgattttctcaaattattaatggtgtcggcgtttcaatgtccgtgtcgt 40742569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 74 - 152
Target Start/End: Original strand, 14126118 - 14126196
Alignment:
Q  74 gacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtcc 152  Q
    ||||| ||||||||||| ||||||||||| ||| | ||||||||||  ||||||  |||| |||||| |||||||||||    
T  14126118 gacacttataattacactgaattatgtgactttatcaaattattaacagtgtcggcgtgttagtgtctgtgtcgtgtcc 14126196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 127
Target Start/End: Original strand, 8423713 - 8423778
Alignment:
Q  62 gtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcg 127  Q
    |||||| |||||||||  ||||||||||| ||||||||||||||| | |||||||||  |||||||    
T  8423713 gtgtccgacaccgacatttataattacactgaattatgtgattttctcaaattattagcggtgtcg 8423778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 118
Target Start/End: Complemental strand, 15029822 - 15029773
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    ||||| |||||||||||||||| |||||||||||| |||| |||||||||    
T  15029822 acaccaacacatataattacactgaattatgtgatattttcaaattatta 15029773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 57 - 118
Target Start/End: Original strand, 28964238 - 28964299
Alignment:
Q  57 gtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||| |||||| |||| ||||| | ||||||||| ||||||||||||||||| |||||||||    
T  28964238 gtgtcgtgtccgacacagacacttgtaattacactgaattatgtgattttttcaaattatta 28964299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 153
Target Start/End: Original strand, 5414174 - 5414258
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    ||||||| |||||||||||||| | ||| ||||||||| |||||  ||||   ||||||  ||||| ||||||||||||||||||    
T  5414174 acaccgatacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtccgtgtccgtgtcgtgtccg 5414258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 16073501 - 16073413
Alignment:
Q  19 gacacttctcggattaggtgtgtcttcatgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttt 107  Q
    |||||| ||||||||||| |||||||  ||||| ||  || | |||||| |||||||||| | ||||||||| |||||||| |||||||    
T  16073501 gacactcctcggattaggcgtgtcttagtgtcggacatgtatcgtgtccgacaccgacacttgtaattacactgaattatgcgattttt 16073413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 153
Target Start/End: Complemental strand, 24343560 - 24343480
Alignment:
Q  73 cgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    |||||| ||||||||||| ||||||||| ||||| | |||||||||   ||||||  ||||| | ||||||||||||||||    
T  24343560 cgacacctataattacactgaattatgtaattttctcaaattattatccgtgtcggcgtgtcggcgtccgtgtcgtgtccg 24343480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 40481741 - 40481610
Alignment:
Q  26 ctcggattaggtgtgtcttcatgtcgaactcgtgttgtgtccaacaccgacaca-----tataattacacagaattatgtgattttttaaaattattaat 120  Q
    ||||||||| |||||| |   ||||| || ||||| |||||||||||||||| |     | ||||||||| |||||||||||||||| ||| |||||| |    
T  40481741 ctcggattaagtgtgtttcggtgtcggacacgtgtcgtgtccaacaccgacataacacttgtaattacactgaattatgtgatttttcaaa-ttattagt 40481643  T
Q  121 ggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
     || |||  ||||||||||| ||||||||||||    
T  40481642 tgtatcggcgtgtcagtgtcagtgtcgtgtccg 40481610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 120
Target Start/End: Original strand, 6485613 - 6485664
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaat 120  Q
    |||||||||| | |||||||||  |||||||||||||||| |||||||||||    
T  6485613 acaccgacacttgtaattacactaaattatgtgattttttcaaattattaat 6485664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 152
Target Start/End: Complemental strand, 11931333 - 11931254
Alignment:
Q  73 cgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtcc 152  Q
    ||||||||||| ||||||  |||||||||||||||| | |||||||| |||||||   || || ||||||||| ||||||    
T  11931333 cgacacatatatttacactaaattatgtgattttttcatattattaacggtgtcggcatggcattgtccgtgtagtgtcc 11931254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 116
Target Start/End: Original strand, 18576039 - 18576086
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattat 116  Q
    ||||| |||||||||||||||| ||||||||||||||| | |||||||    
T  18576039 acaccaacacatataattacaccgaattatgtgattttctcaaattat 18576086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 151
Target Start/End: Original strand, 20521874 - 20521933
Alignment:
Q  92 gaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtc 151  Q
    ||||||||||||||| | |||||||||  ||| |||  ||||||||||||||||||||||    
T  20521874 gaattatgtgattttatcaaattattatcggtatcggcgtgtcagtgtccgtgtcgtgtc 20521933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 108
Target Start/End: Original strand, 22234892 - 22234931
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgatttttt 108  Q
    ||||||||||||| |||||||| |||||||||||||||||    
T  22234892 acaccgacacatagaattacactgaattatgtgatttttt 22234931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 127
Target Start/End: Complemental strand, 40613504 - 40613449
Alignment:
Q  72 ccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcg 127  Q
    ||||||||||||||||||| ||||||||||||||| | ||| |||||  |||||||    
T  40613504 ccgacacatataattacactgaattatgtgattttctcaaaatattagcggtgtcg 40613449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 117
Target Start/End: Complemental strand, 9996919 - 9996849
Alignment:
Q  47 tgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattatt 117  Q
    ||||| || |||||| ||||  ||||||| ||||||||||| || ||||||||||||||| | ||||||||    
T  9996919 tgtcggacacgtgttatgtctgacaccgagacatataattatactgaattatgtgattttctcaaattatt 9996849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 164
Target Start/End: Original strand, 20950462 - 20950516
Alignment:
Q  110 aaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccgtata 164  Q
    ||||||| |||||| |||| ||| ||||||| || ||||||||||||||||||||    
T  20950462 aaattatcaatggtatcgacgtgacagtgtctgtatcgtgtccgatatccgtata 20950516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 153
Target Start/End: Original strand, 21539879 - 21539953
Alignment:
Q  79 atataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    ||||||||||||  |||||| ||||||| | ||||||||||||||||||   ||||||||||  ||| |||||||    
T  21539879 atataattacactaaattatatgattttcttaaattattaatggtgtcggcatgtcagtgtctatgttgtgtccg 21539953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 146
Target Start/End: Complemental strand, 30299004 - 30298926
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgatttttta-aaattattaatggtgtcgatgtgtcagtgtccgtgtc 146  Q
    |||||||||| | ||||||||| ||||||||| |||||||  |||||||||   ||||||  |||||||||||||||||    
T  30299004 acaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 30298926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 146
Target Start/End: Complemental strand, 30327872 - 30327794
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgatttttta-aaattattaatggtgtcgatgtgtcagtgtccgtgtc 146  Q
    |||||||||| | ||||||||| ||||||||| |||||||  |||||||||   ||||||  |||||||||||||||||    
T  30327872 acaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 30327794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 127
Target Start/End: Original strand, 36409514 - 36409571
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcg 127  Q
    |||||||||| |||||||||||  |||||||||| |||||  |||||||||||||||||    
T  36409514 acaccgacacctataattacactaaattatgtgacttttt-caattattaatggtgtcg 36409571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 127
Target Start/End: Original strand, 36423680 - 36423737
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcg 127  Q
    |||||||||| |||||||||||  |||||||||| |||||  |||||||||||||||||    
T  36423680 acaccgacacctataattacactaaattatgtgacttttt-caattattaatggtgtcg 36423737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 108
Target Start/End: Complemental strand, 42640593 - 42640547
Alignment:
Q  62 gtgtccaacaccgacacatataattacacagaattatgtgatttttt 108  Q
    |||||| |||||||||| | ||||||||| |||||||||||||||||    
T  42640593 gtgtccgacaccgacacttgtaattacactgaattatgtgatttttt 42640547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 143
Target Start/End: Complemental strand, 4383411 - 4383351
Alignment:
Q  82 taattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgt 143  Q
    ||||||||| |||||||||||| |||| ||||||||| | || |||| ||||||||||||||    
T  4383411 taattacactgaattatgtgat-ttttcaaattattagttgtatcgacgtgtcagtgtccgt 4383351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 118
Target Start/End: Original strand, 11596354 - 11596403
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    ||||| |||| | ||||||||| ||||||||||||||||| |||||||||    
T  11596354 acacctacacttgtaattacactgaattatgtgattttttcaaattatta 11596403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 118
Target Start/End: Original strand, 15659762 - 15659811
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    ||||| |||||||||||||||| |||||||| |||||| | |||||||||    
T  15659762 acaccaacacatataattacaccgaattatgagattttctcaaattatta 15659811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 106
Target Start/End: Complemental strand, 16189774 - 16189729
Alignment:
Q  61 tgtgtccaacaccgacacatataattacacagaattatgtgatttt 106  Q
    |||||||  |||||||||| |||||||||| |||||||||||||||    
T  16189774 tgtgtccgtcaccgacacacataattacactgaattatgtgatttt 16189729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 153
Target Start/End: Original strand, 35723386 - 35723470
Alignment:
Q  69 acaccgacacatataattacacagaattatgtg-attttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    |||| ||||||||||||||||  |||||||||| ||||| | |||||||||  |||||||  |||||||||| | |||||||||||    
T  35723386 acactgacacatataattacattgaattatgtgtattttctcaaattattagcggtgtcggcgtgtcagtgt-catgtcgtgtccg 35723470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 151
Target Start/End: Complemental strand, 7012125 - 7012041
Alignment:
Q  67 caacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtc 151  Q
    ||||||||| || ||| || |||| ||||||||| ||||| | |||||||||  |||||||  ||||| ||||||||||| ||||    
T  7012125 caacaccgatacctatgatcacactgaattatgtcattttctcaaattattatcggtgtcggcgtgtcggtgtccgtgtcctgtc 7012041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 125
Target Start/End: Original strand, 7214524 - 7214580
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgt 125  Q
    |||||||| ||||||||||||   |||||||||||||| | ||||||||| ||||||    
T  7214524 acaccgacgcatataattacattaaattatgtgattttctcaaattattagtggtgt 7214580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 151
Target Start/End: Complemental strand, 20633508 - 20633460
Alignment:
Q  103 ttttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtc 151  Q
    |||||| |||||||||  |||||||| |||||||||||||| |||||||    
T  20633508 ttttttcaaattattagcggtgtcgacgtgtcagtgtccgtatcgtgtc 20633460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 111
Target Start/End: Original strand, 32915610 - 32915650
Alignment:
Q  71 accgacacatataattacacagaattatgtgattttttaaa 111  Q
    ||||| |||||||||||||  ||||||||||||||||||||    
T  32915610 accgaaacatataattacattgaattatgtgattttttaaa 32915650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 145
Target Start/End: Complemental strand, 33950193 - 33950117
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgt 145  Q
    |||||||||||||| ||||||   |||||||||||||| | |||||||||  || || || |||||||||| |||||    
T  33950193 acaccgacacatatgattacattaaattatgtgattttctcaaattattagcggcgttgaagtgtcagtgttcgtgt 33950117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 118
Target Start/End: Complemental strand, 40774333 - 40774289
Alignment:
Q  74 gacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    ||||||||||||||||  ||||||| ||||||| |||||||||||    
T  40774333 gacacatataattacattgaattatctgattttataaaattatta 40774289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 118
Target Start/End: Complemental strand, 47264030 - 47263994
Alignment:
Q  82 taattacacagaattatgtgattttttaaaattatta 118  Q
    ||||||||||||||||||||||||||  |||||||||    
T  47264030 taattacacagaattatgtgatttttacaaattatta 47263994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 1e-25; HSPs: 79)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 16833416 - 16833281
Alignment:
Q  18 agacacttctcggattaggtgtgtcttcatgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattatt 117  Q
    ||||||| |||||||| |||||||| |  ||||| || ||||| ||||| ||||||||||| | ||||||||| ||| ||||||||||||| ||||||||    
T  16833416 agacactcctcggattcggtgtgtcctggtgtcggacgcgtgtcgtgtctaacaccgacacttgtaattacactgaagtatgtgattttttcaaattatt 16833317  T
Q  118 aatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    | | ||||||  ||||||||||| ||||||||||||    
T  16833316 agttgtgtcggcgtgtcagtgtctgtgtcgtgtccg 16833281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 153
Target Start/End: Complemental strand, 34595241 - 34595107
Alignment:
Q  19 gacacttctcggattaggtgtgtcttcatgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||| |||||||||||||||||    ||||  || ||||| |||||| |||||||||| | ||||||||| ||||||||||||||||| |||||||||    
T  34595241 gacactcctcggattaggtgtgtcccggtgtcagacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 34595142  T
Q  119 atggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
     | ||||||  |||||| |||||||||||||||||    
T  34595141 gttgtgtcggcgtgtcattgtccgtgtcgtgtccg 34595107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 56 - 151
Target Start/End: Complemental strand, 9658949 - 9658854
Alignment:
Q  56 cgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtc 151  Q
    ||||| ||||| |||||||||| |||||||||||| ||||||||||||||| | |||||||||  |||||||  ||||||||||||||||||||||    
T  9658949 cgtgtcgtgtctaacaccgacaaatataattacactgaattatgtgattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtc 9658854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 69 - 153
Target Start/End: Complemental strand, 9027235 - 9027151
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    |||||||||||||||||||||| ||||||||||||| | | |||||||||  |||||||  ||||||||||||||||||||||||    
T  9027235 acaccgacacatataattacacggaattatgtgattatctcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccg 9027151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 62 - 161
Target Start/End: Original strand, 426509 - 426608
Alignment:
Q  62 gtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccgt 161  Q
    |||||| |||||||||| | ||||||||   |||||||||||||||| ||||||||||  ||||||  |||||||||||||||||||||||| |||||||    
T  426509 gtgtccgacaccgacacttgtaattacatttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtccggtatccgt 426608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 19 - 153
Target Start/End: Original strand, 8776920 - 8777059
Alignment:
Q  19 gacacttctcggattaggtgtgtcttcatgtcgaac-----tcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaat 113  Q
    |||||| ||||||||||||||||||   ||||| ||     |||||| |||||| ||||| |||| | ||||||||| ||||| ||||||||||| ||||    
T  8776920 gacactcctcggattaggtgtgtctcggtgtcggacacgtgtcgtgtcgtgtccgacaccaacacttgtaattacactgaattttgtgattttttcaaat 8777019  T
Q  114 tattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    ||||| | ||||||  ||||||||||||||||||||||||    
T  8777020 tattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccg 8777059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 62 - 152
Target Start/End: Original strand, 5732505 - 5732595
Alignment:
Q  62 gtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtcc 152  Q
    |||||| ||||||||||||||||||||||  || ||||||||||| | |||||||||| |||||||  |||||||||||| ||||||||||    
T  5732505 gtgtccgacaccgacacatataattacactaaaatatgtgattttctcaaattattaacggtgtcggcgtgtcagtgtccatgtcgtgtcc 5732595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 60 - 142
Target Start/End: Original strand, 7265586 - 7265668
Alignment:
Q  60 ttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccg 142  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||| | |||||||||  ||||| |  |||||||||||||    
T  7265586 ttgtgtccgacaccgacacatataattacactgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccg 7265668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 69 - 151
Target Start/End: Original strand, 8365521 - 8365603
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtc 151  Q
    |||||||||| | ||||||||| |||||||||||| |||| ||||||||| | ||||||  ||||||||||||||||||||||    
T  8365521 acaccgacacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtc 8365603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 58 - 152
Target Start/End: Original strand, 13360363 - 13360457
Alignment:
Q  58 tgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtcc 152  Q
    |||||||||  ||||||| |||||||||||||| ||||||||||||||| | |||||| || ||||||||| ||||| |||| ||| ||||||||    
T  13360363 tgttgtgtctgacaccgaaacatataattacactgaattatgtgattttctcaaattactagtggtgtcgacgtgtctgtgttcgtatcgtgtcc 13360457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 150
Target Start/End: Complemental strand, 13851789 - 13851712
Alignment:
Q  73 cgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgt 150  Q
    |||||||||||||||||| |||||| || ||||| | |||||||||  |||||||| |||||||||||||||||||||    
T  13851789 cgacacatataattacactgaattacgttattttctcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgt 13851712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 57 - 153
Target Start/End: Original strand, 31579217 - 31579311
Alignment:
Q  57 gtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    |||| |||||| |||||||||||||  ||||||| ||||||||||||||| | |||||||||| ||||| | |||| |||||||| |||||||||||    
T  31579217 gtgtcgtgtccgacaccgacacata--attacactgaattatgtgattttctcaaattattaacggtgttggtgtggcagtgtccatgtcgtgtccg 31579311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 69 - 153
Target Start/End: Original strand, 10770676 - 10770760
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    |||||||||| | ||||||||| ||||||||||||||||| ||||||||| | |||| |  |||||||||||| |||||||||||    
T  10770676 acaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgttggcgtgtcagtgtccatgtcgtgtccg 10770760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 69 - 153
Target Start/End: Complemental strand, 16766754 - 16766670
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    |||||||||| | ||||||||| ||||||||||||||||| |||||||||   ||||||  |||||||||||| |||||||||||    
T  16766754 acaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtccg 16766670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 74 - 149
Target Start/End: Original strand, 17341671 - 17341746
Alignment:
Q  74 gacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtg 149  Q
    ||||| ||||||||||| ||||||||||||||| | |||||||||| |||||||  ||||||||| ||||||||||    
T  17341671 gacacttataattacactgaattatgtgattttatcaaattattaacggtgtcggcgtgtcagtgcccgtgtcgtg 17341746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 146
Target Start/End: Original strand, 17841541 - 17841668
Alignment:
Q  19 gacacttctcggattaggtgtgtcttcatgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||| ||||||||||| ||||||   ||||| || | ||| |||||| |||||| ||| | |||||||||  |||||||||||||||| |||||||||    
T  17841541 gacactcctcggattaggcgtgtctcagtgtcggacacatgtcgtgtccgacaccgtcacttgtaattacactaaattatgtgattttttcaaattatta 17841640  T
Q  119 atggtgtcgatgtgtcagtgtccgtgtc 146  Q
       ||||||  |||||||||||||||||    
T  17841641 gctgtgtcggcgtgtcagtgtccgtgtc 17841668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 163
Target Start/End: Original strand, 853821 - 853955
Alignment:
Q  29 ggattaggtgtgtcttcatgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcga 128  Q
    |||||||| ||||||  |||||| || | ||| || ||| |||||||||| | ||||| |||  |||||||||||||||| ||||||||| | ||||||     
T  853821 ggattaggcgtgtctctatgtcggacacatgtcgtatccgacaccgacacttgtaattgcacttaattatgtgattttttcaaattattagttgtgtcgg 853920  T
Q  129 tgtgtcagtgtccgtgtcgtgtccgatatccgtat 163  Q
     |||||||  ||||||||||||||| | |||||||    
T  853921 cgtgtcagcatccgtgtcgtgtccggtgtccgtat 853955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 19040450 - 19040341
Alignment:
Q  28 cggattaggtgtgtcttcatgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcg 127  Q
    |||||||||||||||   | || ||||  |||| |||||| |||| ||||||||||||||||| ||||||||||||||| | |||||||||  |||||||    
T  19040450 cggattaggtgtgtcccaaagttgaacatgtgtcgtgtccgacacagacacatataattacactgaattatgtgattttctcaaattattagcggtgtcg 19040351  T
Q  128 atgtgtcagt 137  Q
      ||||||||    
T  19040350 gcgtgtcagt 19040341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 153
Target Start/End: Original strand, 33001278 - 33001375
Alignment:
Q  56 cgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    ||||| |||||| |||||||||||||||||||||   |||||||||||||||| |||||||||   ||||||  |||||| || |||||| |||||||    
T  33001278 cgtgtcgtgtccgacaccgacacatataattacatttaattatgtgattttttcaaattattagcagtgtcggcgtgtcattgaccgtgttgtgtccg 33001375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 153
Target Start/End: Complemental strand, 7938173 - 7938089
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    |||||||||| |||||||||||  |||||| ||||||||| |||||||||   ||||||  |||||||||||| |||||||||||    
T  7938173 acaccgacacttataattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtccg 7938089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 153
Target Start/End: Original strand, 9107372 - 9107456
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    |||||||||| | ||||||||| ||||| ||||||||||| |||||||||   ||||||  |||| |||||||||||||||||||    
T  9107372 acaccgacacttgtaattacactgaattttgtgattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtcgtgtccg 9107456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 153
Target Start/End: Complemental strand, 12696381 - 12696297
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    |||| ||||| | ||||||||| ||||||||| ||||||| |||||||||   ||||||  ||||||||||||||||||||||||    
T  12696381 acactgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccg 12696297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 69 - 152
Target Start/End: Complemental strand, 9629440 - 9629357
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtcc 152  Q
    |||||||||||||||||||||  ||||||||||||||| | ||||||||   |||||||  |||||| | ||||||||||||||    
T  9629440 acaccgacacatataattacattgaattatgtgattttctcaaattattggcggtgtcggcgtgtcaatatccgtgtcgtgtcc 9629357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 69 - 148
Target Start/End: Complemental strand, 19044521 - 19044442
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgt 148  Q
    ||||||||||||||||| |||| |||||||||||| || | ||||||||| | ||||||  |||||||||||| ||||||    
T  19044521 acaccgacacatataataacactgaattatgtgatattctcaaattattagtcgtgtcggcgtgtcagtgtccatgtcgt 19044442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 72 - 163
Target Start/End: Original strand, 30866149 - 30866240
Alignment:
Q  72 ccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccgtat 163  Q
    ||||||||||||||||||  ||||||||||||||| | |||||||||  ||||| | |||||| ||||| ||||| |||||| | |||||||    
T  30866149 ccgacacatataattacattgaattatgtgattttctcaaattattagcggtgttggtgtgtcggtgtcagtgtcatgtccggtgtccgtat 30866240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 163
Target Start/End: Complemental strand, 3398675 - 3398582
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccgtat 163  Q
    ||||||| || ||||||||||| ||||||| |||||||| ||| ||||||   ||||||  ||||||||||||||||||||| |||| |||||||    
T  3398675 acaccgatacttataattacactgaattatatgatttttcaaa-ttattagctgtgtcggcgtgtcagtgtccgtgtcgtgttcgatgtccgtat 3398582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 151
Target Start/End: Complemental strand, 7086852 - 7086770
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtc 151  Q
    ||||||||||||||||||||||  |||||||||||||| | |||||||||   ||| ||| ||||| ||||| ||||||||||    
T  7086852 acaccgacacatataattacactaaattatgtgattttctcaaattattagcagtgccgacgtgtcggtgtctgtgtcgtgtc 7086770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 118
Target Start/End: Original strand, 12627534 - 12627628
Alignment:
Q  24 ttctcggattaggtgtgtcttcatgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    ||||||||||||| ||||||   ||||| ||  |||| |||||| ||| |||||||||| ||||||| ||||||||||||||||| | |||||||    
T  12627534 ttctcggattaggagtgtctcggtgtcggacatgtgtggtgtccgacatcgacacatattattacactgaattatgtgattttttcacattatta 12627628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 74 - 140
Target Start/End: Complemental strand, 17302399 - 17302333
Alignment:
Q  74 gacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtc 140  Q
    |||||||||||||||||| |||||||||||||| | ||||||||| | ||||| || ||||||||||    
T  17302399 gacacatataattacacaaaattatgtgattttcttaaattattagttgtgtccatatgtcagtgtc 17302333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 118
Target Start/End: Original strand, 9025496 - 9025545
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||||||||||||||||||| ||||||||||||||| | |||||||||    
T  9025496 acaccgacacatataattacactgaattatgtgattttctcaaattatta 9025545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 108
Target Start/End: Complemental strand, 7027299 - 7027260
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgatttttt 108  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  7027299 acaccgacacatataattacactgaattatgtgatttttt 7027260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 118
Target Start/End: Complemental strand, 9522950 - 9522899
Alignment:
Q  67 caacaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||||||||| | ||||||||| ||||||||||||||||| |||||||||    
T  9522950 caacaccgacacttgtaattacactgaattatgtgatttttttaaattatta 9522899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 146
Target Start/End: Original strand, 10888982 - 10889053
Alignment:
Q  75 acacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtc 146  Q
    ||||||||||| ||||  |||||||||||||| | |||||||||  |||||| ||||||| |||||||||||    
T  10888982 acacatataatcacactaaattatgtgattttatcaaattattagcggtgtctatgtgtcggtgtccgtgtc 10889053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 153
Target Start/End: Complemental strand, 17435243 - 17435172
Alignment:
Q  82 taattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    ||||||||| ||||||||| |||||||||||||||||    |||||| || |||||||||||||||| ||||    
T  17435243 taattacactgaattatgtaattttttaaaattattagctatgtcgacgtatcagtgtccgtgtcgtatccg 17435172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 146
Target Start/End: Complemental strand, 28152177 - 28152079
Alignment:
Q  47 tgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtc 146  Q
    ||||| || ||||| |||||| |||||||||| | ||||||||| |||||||||||| |||| |||||||||    |||||  |||||||||||||||||    
T  28152177 tgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgat-ttttcaaattattagctttgtcggcgtgtcagtgtccgtgtc 28152079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 152
Target Start/End: Original strand, 34073349 - 34073432
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtcc 152  Q
    |||||||| ||||||||||||| |||||||| |||||| | |||||||||  | ||| |   ||||||||||||||||||||||    
T  34073349 acaccgacccatataattacactgaattatgagattttctcaaattattagcgatgttggcatgtcagtgtccgtgtcgtgtcc 34073432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 1700416 - 1700362
Alignment:
Q  62 gtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattat 116  Q
    |||||| |||||||||| ||||||||||| ||| ||||||||||||| |||||||    
T  1700416 gtgtccgacaccgacacttataattacactgaaatatgtgatttttttaaattat 1700362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 82 - 140
Target Start/End: Original strand, 5970123 - 5970181
Alignment:
Q  82 taattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtc 140  Q
    ||||||||| ||||||||||||||||| ||||||||||  ||||||| ||||| |||||    
T  5970123 taattacactgaattatgtgattttttcaaattattaactgtgtcgacgtgtccgtgtc 5970181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 116
Target Start/End: Original strand, 13364700 - 13364754
Alignment:
Q  62 gtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattat 116  Q
    ||||||||||||||||||||| ||||||| ||||||| ||||||| | |||||||    
T  13364700 gtgtccaacaccgacacatatgattacactgaattatatgattttctcaaattat 13364754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 151
Target Start/End: Original strand, 15489734 - 15489816
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtc 151  Q
    |||||||||| | ||||||||  ||||| ||| ||||||| ||||||||| | ||||||| |||| ||||||||||| |||||    
T  15489734 acaccgacacttgtaattacattgaattgtgtaattttttcaaattattagttgtgtcgacgtgttagtgtccgtgttgtgtc 15489816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 151
Target Start/End: Complemental strand, 19147899 - 19147817
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtc 151  Q
    |||||||||||||||||||| | ||  ||| ||||||| | |||||||||| ||||||  ||||||| |||| ||||||||||    
T  19147899 acaccgacacatataattactctgatctatatgattttcttaaattattaacggtgtctttgtgtcactgtctgtgtcgtgtc 19147817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 97 - 151
Target Start/End: Complemental strand, 33303688 - 33303634
Alignment:
Q  97 atgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtc 151  Q
    |||| ||||||| ||||||||| | |||||||||||||||||||||| |||||||    
T  33303688 atgtcattttttcaaattattattagtgtcgatgtgtcagtgtccgtatcgtgtc 33303634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 118
Target Start/End: Complemental strand, 7151469 - 7151420
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    ||||| ||||||||||||||||  |||||||||||||||| |||||||||    
T  7151469 acaccaacacatataattacacttaattatgtgattttttcaaattatta 7151420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 127
Target Start/End: Complemental strand, 7378043 - 7377978
Alignment:
Q  62 gtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcg 127  Q
    |||||| |||||||||||||||||||||  ||||||||||||||| | ||||| |||  |||||||    
T  7378043 gtgtccgacaccgacacatataattacattgaattatgtgattttctcaaatttttagcggtgtcg 7377978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 118
Target Start/End: Complemental strand, 9617491 - 9617442
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||||||||||||||||||  ||||||||||||||| | |||||||||    
T  9617491 acaccgacacatataattacattgaattatgtgattttctcaaattatta 9617442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 146
Target Start/End: Original strand, 20371112 - 20371189
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtc 146  Q
    ||||||||||||||||| |||  || |||||||||||| | |||||||||  |||||||  |||||| ||||||||||    
T  20371112 acaccgacacatataatcacattgagttatgtgattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtc 20371189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 148
Target Start/End: Complemental strand, 4040520 - 4040444
Alignment:
Q  72 ccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgt 148  Q
    |||||| ||||||||| || |||| ||| |||||| | ||||||||| |||||||| ||| | ||||||||||||||    
T  4040520 ccgacatatataattatactgaataatgcgattttcttaaattattagtggtgtcggtgtttaagtgtccgtgtcgt 4040444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 150
Target Start/End: Complemental strand, 4878049 - 4877918
Alignment:
Q  19 gacacttctcggattaggtgtgtcttcatgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtga-ttttttaaaattatt 117  Q
    |||||| ||||||||||| ||||| |  ||||| ||  |||| |||||| |||||||||| | |||||| ||  |||||||||| |||||| ||||||||    
T  4878049 gacactcctcggattaggcgtgtcctg-tgtcggacatgtgtcgtgtccgacaccgacacttgtaattatacttaattatgtgacttttttcaaattatt 4877951  T
Q  118 aatggtgtcgatgtgtcagtgtccgtgtcgtgt 150  Q
    |   |||||| ||||||| | ||||||||||||    
T  4877950 agctgtgtcggtgtgtcactatccgtgtcgtgt 4877918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 133
Target Start/End: Original strand, 9195756 - 9195820
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgt 133  Q
    ||||||||||||||||||||||  |||||||| ||||| | |||||||||   ||||||||||||    
T  9195756 acaccgacacatataattacactaaattatgtcattttctcaaattattaggagtgtcgatgtgt 9195820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 21206947 - 21206891
Alignment:
Q  62 gtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    ||||||||||||||||||||||||||||   ||||| ||| ||| ||||||||||||    
T  21206947 gtgtccaacaccgacacatataattacattaaattaagtgttttcttaaaattatta 21206891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 21924930 - 21924986
Alignment:
Q  62 gtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||| |||||||||||||||||||||| ||||||| |||| || | |||||||||    
T  21924930 gtgtccgacaccgacacatataattacactgaattatttgatattctcaaattatta 21924986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 140
Target Start/End: Original strand, 5626686 - 5626769
Alignment:
Q  57 gtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtc 140  Q
    |||| |||||| ||||||||||||||| |||||| ||| || |||||||| |||||  |||| | ||||||  |||||||||||    
T  5626686 gtgtcgtgtccgacaccgacacatatatttacactgaactaagtgattttctaaaaaaattagttgtgtcggcgtgtcagtgtc 5626769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 140
Target Start/End: Complemental strand, 10842585 - 10842518
Alignment:
Q  73 cgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtc 140  Q
    |||||||||| |||||||  |||||||||||||||| |||||||||  |||||||  ||||| |||||    
T  10842585 cgacacatatgattacactaaattatgtgattttttcaaattattagcggtgtcggcgtgtccgtgtc 10842518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 115
Target Start/End: Complemental strand, 6214617 - 6214571
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaatta 115  Q
    |||||||||||| |||||||||  ||||||||| |||||||||||||    
T  6214617 acaccgacacatctaattacacttaattatgtgtttttttaaaatta 6214571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 127
Target Start/End: Original strand, 7801158 - 7801216
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcg 127  Q
    |||||||||| | ||||||| | ||||||||||||||||| ||||||||| | ||||||    
T  7801158 acaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcg 7801216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 143
Target Start/End: Complemental strand, 7930338 - 7930288
Alignment:
Q  93 aattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgt 143  Q
    |||||||||||||||| ||||||||||| ||||||   |||||||||||||    
T  7930338 aattatgtgattttttcaaattattaattgtgtcggcatgtcagtgtccgt 7930288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 163
Target Start/End: Complemental strand, 20518402 - 20518308
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccgtat 163  Q
    ||||| ||||||||||||| || || |||||| ||||| | ||||| ||| ||||||   |||||||||||| ||||||| ||||  ||||||||    
T  20518402 acaccaacacatataattatactgatttatgtaattttctcaaattgttagtggtgttagtgtgtcagtgtctgtgtcgtatccggcatccgtat 20518308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 163
Target Start/End: Original strand, 32320671 - 32320764
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccgtat 163  Q
    ||||||| ||||||||| |||  ||||||||||||||| | |||||||||| ||||||   || ||||||  ||||| ||||||| |||||||||    
T  32320671 acaccgatacatataatgacattgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgctcgtgttgtgtccg-tatccgtat 32320764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 150
Target Start/End: Complemental strand, 1532290 - 1532214
Alignment:
Q  76 cacatataattacacagaattatgtgattttttaaaattattaatg--gtgtcgatgtgtcagtgtccgtgtcgtgt 150  Q
    ||||||||||||||| ||||||||| ||||| | |||||||||  |  ||||||| ||||||||||  |||||||||    
T  1532290 cacatataattacactgaattatgtaattttatcaaattattagcggtgtgtcgacgtgtcagtgtttgtgtcgtgt 1532214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 118
Target Start/End: Original strand, 7996380 - 7996429
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||||| ||||||||||||| ||||||| ||||||| | |||||||||    
T  7996380 acaccgacgcatataattacactgaattatatgattttctcaaattatta 7996429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 118
Target Start/End: Complemental strand, 8022421 - 8022372
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||||| ||||||||||||| ||||||| ||||||| | |||||||||    
T  8022421 acaccgacgcatataattacactgaattatatgattttctcaaattatta 8022372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 151
Target Start/End: Complemental strand, 8101142 - 8101058
Alignment:
Q  69 acaccgacacatataattacacagaattatgtga--ttttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtc 151  Q
    |||| ||||||||||||||||| | ||||| |||  |||||| ||||||||||| | ||||| |||||| | ||||||| |||||    
T  8101142 acactgacacatataattacactggattatatgatttttttttaaattattaatagagtcgacgtgtcaatatccgtgttgtgtc 8101058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 106
Target Start/End: Original strand, 11591876 - 11591909
Alignment:
Q  73 cgacacatataattacacagaattatgtgatttt 106  Q
    |||||||||||||||||| |||||||||||||||    
T  11591876 cgacacatataattacactgaattatgtgatttt 11591909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 14721298 - 14721241
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtc 126  Q
    ||||| ||||||||||||| |  ||||||||| ||||| | |||||||||||||||||    
T  14721298 acaccaacacatataattatagtgaattatgtaattttcttaaattattaatggtgtc 14721241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 117
Target Start/End: Original strand, 16388246 - 16388283
Alignment:
Q  80 tataattacacagaattatgtgattttttaaaattatt 117  Q
    ||||||||||| ||||||||||||||||| ||||||||    
T  16388246 tataattacactgaattatgtgattttttcaaattatt 16388283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 161
Target Start/End: Complemental strand, 25096477 - 25096388
Alignment:
Q  72 ccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccgt 161  Q
    |||||| || |||||||||   ||||||||||||| | ||||||||| ||||||||  ||||| ||||| |||| || |||||| |||||    
T  25096477 ccgacatatgtaattacactagattatgtgattttctcaaattattagtggtgtcgtcgtgtcggtgtctgtgttgtatccgatgtccgt 25096388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 118
Target Start/End: Original strand, 26178683 - 26178732
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||||||||||| |||||||  |||||||||||||| | |||||||||    
T  26178683 acaccgacacatatgattacactaaattatgtgattttatcaaattatta 26178732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 106
Target Start/End: Complemental strand, 26562742 - 26562709
Alignment:
Q  73 cgacacatataattacacagaattatgtgatttt 106  Q
    |||||||||||||||||| |||||||||||||||    
T  26562742 cgacacatataattacactgaattatgtgatttt 26562709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 118
Target Start/End: Complemental strand, 31384977 - 31384928
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||| ||||| | ||||||||| ||||||||||||||||| |||||||||    
T  31384977 acactgacacttgtaattacactgaattatgtgattttttcaaattatta 31384928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 153
Target Start/End: Complemental strand, 31959213 - 31959132
Alignment:
Q  72 ccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    ||||||| | ||||||||| | ||||||||||||||| |||||||||   ||| ||  |||||||||| |||||| ||||||    
T  31959213 ccgacacttgtaattacactgcattatgtgattttttcaaattattagctgtgacggcgtgtcagtgttcgtgtcatgtccg 31959132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 118
Target Start/End: Original strand, 32511668 - 32511717
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    ||||| |||| ||||||||||| ||||||||||||||| | |||||||||    
T  32511668 acaccaacacttataattacactgaattatgtgattttcttaaattatta 32511717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 33925039 - 33925108
Alignment:
Q  71 accgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtc 140  Q
    |||||||||||| ||||||| ||||||| | ||||||||||||| ||| | || ||||| ||| ||||||    
T  33925039 accgacacatattattacactgaattatataattttttaaaattgttagtagtatcgatatgttagtgtc 33925108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 403859 - 403915
Alignment:
Q  62 gtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||| |||||||||| | || ||||||  |||||||||||||||| |||||||||    
T  403859 gtgtccgacaccgacacttgtagttacactaaattatgtgattttttcaaattatta 403915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 153
Target Start/End: Complemental strand, 2117129 - 2117050
Alignment:
Q  73 cgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    |||||| ||||||| ||  ||||||||||||||||| |||||||||  |||||||  ||||| || | |||||||||||||    
T  2117129 cgacacttataattgcattgaattatgtgattttttcaaattattagaggtgtcggagtgtccgtat-cgtgtcgtgtccg 2117050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 161
Target Start/End: Original strand, 2153893 - 2153981
Alignment:
Q  73 cgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccgt 161  Q
    |||||| |||||||||||  |||||| | ||||| | ||||||||  | ||||||  ||||| ||||||||||| |||||||| |||||    
T  2153893 cgacacctataattacactaaattatatcattttcttaaattattgttcgtgtcggcgtgtcggtgtccgtgtcatgtccgatgtccgt 2153981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 153
Target Start/End: Complemental strand, 10294164 - 10294080
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    |||||||||||||||||||||  ||| |||| |||| | | |||||||||  ||| |||   ||||||| |||||||||||||||    
T  10294164 acaccgacacatataattacattgaaatatgcgattatctcaaattattagcggtatcggcatgtcagtatccgtgtcgtgtccg 10294080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 153
Target Start/End: Complemental strand, 18367893 - 18367810
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    |||||||||||||||||||||| | ||| ||||||||| |||||  ||||   ||||||  ||||| |||||| |||||||||||    
T  18367893 acaccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtc-gtgtccatgtcgtgtccg 18367810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 140
Target Start/End: Complemental strand, 24645594 - 24645466
Alignment:
Q  13 agcagagacacttctcggattaggtgtgtcttcatgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgatt-ttttaaa 111  Q
    |||| |||||||  |||||||||  |||||||  ||||| || ||||| |||||  |||||||||| | ||| || || ||||||||||||| |||| ||    
T  24645594 agcacagacactcttcggattagacgtgtcttggtgtcggacacgtgtcgtgtctgacaccgacacttgtaactatactgaattatgtgatttttttcaa 24645495  T
Q  112 attattaatggtgtcgatgtgtcagtgtc 140  Q
    |||||||   |||||||  ||||||||||    
T  24645494 attattagctgtgtcgacatgtcagtgtc 24645466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 29020991 - 29020931
Alignment:
Q  47 tgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttt 107  Q
    |||||||| ||||| |||||| ||||  |||| ||||||||||| |||||||| |||||||    
T  29020991 tgtcgaacacgtgtcgtgtccgacacaaacacctataattacactgaattatgcgattttt 29020931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 29 - 163
Target Start/End: Complemental strand, 90940 - 90806
Alignment:
Q  29 ggattaggtgtgtcttcatgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcga 128  Q
    |||||||| |||| ||  ||||| || |||||||||||  ||| ||||| |||||||||||| ||||||| ||||||| | |||||||||||||||| |     
T  90940 ggattaggcgtgttttggtgtcggacacgtgttgtgtctgacatcgacatatataattacactgaattatatgattttctcaaattattaatggtgttgg 90841  T
Q  129 tgtgtcagtgtccgtgtcgtgtccgatatccgtat 163  Q
    |||||||||||| |||||||||||  |||||||||    
T  90840 tgtgtcagtgtctgtgtcgtgtccagtatccgtat 90806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 128
Target Start/End: Complemental strand, 99950 - 99891
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcga 128  Q
    ||||| |||||||||||||||  ||||||||| ||||| |||||||||||  ||||||||    
T  99950 acaccaacacatataattacattgaattatgttattttctaaaattattatcggtgtcga 99891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 4e-25; HSPs: 65)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 13 - 151
Target Start/End: Original strand, 20242673 - 20242811
Alignment:
Q  13 agcagagacacttctcggattaggtgtgtcttcatgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaa 112  Q
    |||| |||||||  |||||| ||| ||||| || ||||  || |||||||||||| |||||||||||||||||||||| ||||||||||||||| |||||    
T  20242673 agcacagacactcttcggataaggcgtgtcctcgtgtcagacacgtgttgtgtccgacaccgacacatataattacactgaattatgtgattttctaaaa 20242772  T
Q  113 ttattaatggtgtcgatgtgtcagtgtccgtgtcgtgtc 151  Q
      |||| | ||||||  |||||||||||| |||||||||    
T  20242773 aaattagttgtgtcggcgtgtcagtgtccatgtcgtgtc 20242811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 70 - 153
Target Start/End: Complemental strand, 23718082 - 23717999
Alignment:
Q  70 caccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    ||||||||||||||||||||| ||||||||||| ||| | |||||||||  ||||||| |||||||||||||||||| ||||||    
T  23718082 caccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtccg 23717999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 70 - 153
Target Start/End: Complemental strand, 24105754 - 24105671
Alignment:
Q  70 caccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    ||||||||||||||||||||| ||||||||||| ||| | |||||||||  ||||||| |||||||||||||||||| ||||||    
T  24105754 caccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtccg 24105671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 29 - 140
Target Start/End: Complemental strand, 31808174 - 31808063
Alignment:
Q  29 ggattaggtgtgtcttcatgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcga 128  Q
    ||||||||||||||    ||||||||  |||| |||| |||||| ||||||||||||||||| ||||||||||||||| | |||||||||  |||||||     
T  31808174 ggattaggtgtgtccaggtgtcgaacatgtgtcgtgttcaacactgacacatataattacactgaattatgtgattttgttaaattattagcggtgtcgg 31808075  T
Q  129 tgtgtcagtgtc 140  Q
    ||||||||||||    
T  31808074 tgtgtcagtgtc 31808063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 69 - 155
Target Start/End: Complemental strand, 18422020 - 18421934
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgat 155  Q
    |||||||||| | ||||||||| |||||||||||| |||| ||||||||||| ||||||  ||||||||||||||||||| ||||||    
T  18422020 acaccgacacttgtaattacactgaattatgtgatatttttaaattattaattgtgtcggcgtgtcagtgtccgtgtcgtatccgat 18421934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 69 - 151
Target Start/End: Original strand, 34784984 - 34785066
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtc 151  Q
    ||||||||||||||||||||||  |||||||||||||| |||||  |||| | |||||| |||||||||||||||||||||||    
T  34784984 acaccgacacatataattacactaaattatgtgattttctaaaaaaattagttgtgtcggtgtgtcagtgtccgtgtcgtgtc 34785066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 148
Target Start/End: Complemental strand, 15972972 - 15972851
Alignment:
Q  27 tcggattaggtgtgtcttcatgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtc 126  Q
    ||||||||||||||||     |||| || ||||| |||||| |||||||||| | ||||||||| ||||| ||| ||||||| ||||||||||| |||||    
T  15972972 tcggattaggtgtgtcccggcgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactgaattgtgtaattttttcaaattattaattgtgtc 15972873  T
Q  127 gatgtgtcagtgtccgtgtcgt 148  Q
    |  |||||||||||||||||||    
T  15972872 ggcgtgtcagtgtccgtgtcgt 15972851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 57 - 153
Target Start/End: Original strand, 30404840 - 30404936
Alignment:
Q  57 gtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    |||| |||||| || ||||||| | ||||||||| ||||||||||||||||| ||||||||||  ||||||  ||||||||||||||||| ||||||    
T  30404840 gtgtcgtgtccgacgccgacacttgtaattacactgaattatgtgattttttcaaattattaaccgtgtcggcgtgtcagtgtccgtgtcatgtccg 30404936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 62 - 176
Target Start/End: Original strand, 19536392 - 19536507
Alignment:
Q  62 gtgtccaacaccgacacatataattacacagaattatgtga-ttttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccg 160  Q
    |||||| |||||||||| | ||||||||| ||||||||||| |||||| ||||||||| | ||||||  |||||| ||||||||||||||||| | ||||    
T  19536392 gtgtccgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccg 19536491  T
Q  161 tatatttgctacatag 176  Q
    ||| | |||| |||||    
T  19536492 tatctgtgcttcatag 19536507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 69 - 155
Target Start/End: Original strand, 36756346 - 36756432
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgat 155  Q
    |||||||||| ||||||||||| ||||||||| |||| || ||||||||| | ||||||| ||||||||||| ||||||| ||||||    
T  36756346 acaccgacacttataattacactgaattatgttatttcttcaaattattagttgtgtcgacgtgtcagtgtctgtgtcgtatccgat 36756432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 75 - 151
Target Start/End: Complemental strand, 21616813 - 21616737
Alignment:
Q  75 acacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtc 151  Q
    |||||||||||||||| ||||||||||||||| | |||||||||  |||||||  ||||| ||||||||||||||||    
T  21616813 acacatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtccgtgtccgtgtcgtgtc 21616737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 69 - 152
Target Start/End: Original strand, 20539676 - 20539759
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtcc 152  Q
    |||||||||| | |||||||||  |||||| ||||||||| |||||||||   ||||||| |||||||||||||||||||||||    
T  20539676 acaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcgacgtgtcagtgtccgtgtcgtgtcc 20539759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 76 - 146
Target Start/End: Original strand, 16069263 - 16069333
Alignment:
Q  76 cacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtc 146  Q
    |||| |||||||||| ||||||| ||||||||| |||||||||| |||||||  |||||||||||||||||    
T  16069263 cacaaataattacactgaattatatgatttttttaaattattaacggtgtcggcgtgtcagtgtccgtgtc 16069333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 153
Target Start/End: Original strand, 18840965 - 18841099
Alignment:
Q  19 gacacttctcggattaggtgtgtcttcatgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||| |||||||||||||||||    ||||| ||  |||| |||||  |||||||||| | |||||||||  |||||||| ||||||| |||||||||    
T  18840965 gacactcctcggattaggtgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacacttgtaattacacttaattatgtaattttttcaaattatta 18841064  T
Q  119 atggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
     | |||||   |||||||||||| |||||||||||    
T  18841065 gttgtgtcagcgtgtcagtgtccatgtcgtgtccg 18841099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 151
Target Start/End: Complemental strand, 28412395 - 28412325
Alignment:
Q  81 ataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtc 151  Q
    |||||||||| ||||||||||||||| | |||||||||| ||||| || |||| |||||||||||||||||    
T  28412395 ataattacactgaattatgtgattttatcaaattattaacggtgttgacgtgttagtgtccgtgtcgtgtc 28412325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 82 - 151
Target Start/End: Original strand, 12940950 - 12941019
Alignment:
Q  82 taattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtc 151  Q
    ||||||||| ||||||| ||||||||| ||||||||| | ||||| | ||||||||||||||||||||||    
T  12940950 taattacactgaattatatgattttttcaaattattagttgtgtcaacgtgtcagtgtccgtgtcgtgtc 12941019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 2438671 - 2438770
Alignment:
Q  19 gacacttctcggattaggtgtgtcttcatgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||| ||||||||||| |||||    ||||| ||  |||| |||||| |||||||||| | ||||||||| ||||||||||||||||| |||||||||    
T  2438671 gacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattttttgaaattatta 2438770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 72 - 148
Target Start/End: Original strand, 10547933 - 10548011
Alignment:
Q  72 ccgacacatataattacacagaattatgtgattttt--taaaattattaatggtgtcgatgtgtcagtgtccgtgtcgt 148  Q
    |||| |||||||| ||||| ||||||| ||||||||  | |||||||||| |||||||| |||||||||||||||||||    
T  10547933 ccgatacatataactacactgaattatatgatttttatttaaattattaacggtgtcgacgtgtcagtgtccgtgtcgt 10548011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 119
Target Start/End: Original strand, 29176446 - 29176545
Alignment:
Q  20 acacttctcggattaggtgtgtcttcatgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaa 119  Q
    |||||||| |||||||||||||||   ||||| ||  |||  |||||||||||| |||| ||||||||||| |||||||||||  |||| ||||||||||    
T  29176446 acacttcttggattaggtgtgtctcagtgtcggacatgtgccgtgtccaacaccaacacttataattacactgaattatgtgaccttttcaaattattaa 29176545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 148
Target Start/End: Complemental strand, 6940351 - 6940233
Alignment:
Q  30 gattaggtgtgtcttcatgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgat 129  Q
    |||||||||||||||  ||| | || ||||| |||||  | |||||||| | |||||||||  |||||||| | |||||||||||||||   ||||||      
T  6940351 gattaggtgtgtcttggtgttggacacgtgtcgtgtcggataccgacacttgtaattacacttaattatgtaactttttaaaattattagctgtgtcggc 6940252  T
Q  130 gtgtcagtgtccgtgtcgt 148  Q
    |||||||||||||||||||    
T  6940251 gtgtcagtgtccgtgtcgt 6940233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 140
Target Start/End: Original strand, 38117118 - 38117232
Alignment:
Q  26 ctcggattaggtgtgtcttcatgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgt 125  Q
    ||||||||||| |||||    ||||| || |||||||||||| ||||| |||| | ||||||||| ||| ||||||||||||| |||||||||   ||||    
T  38117118 ctcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccaacacttgtaattacaccgaagtatgtgattttttcaaattattagctgtgt 38117217  T
Q  126 cgatgtgtcagtgtc 140  Q
    ||  |||||||||||    
T  38117218 cggcgtgtcagtgtc 38117232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 57 - 118
Target Start/End: Complemental strand, 5367261 - 5367200
Alignment:
Q  57 gtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||| |||||| |||||||||||||||||||||| ||||||||||||||  | |||||||||    
T  5367261 gtgtcgtgtccgacaccgacacatataattacactgaattatgtgatttcctcaaattatta 5367200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 161
Target Start/End: Original strand, 23058444 - 23058537
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgatttttta-aaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccgt 161  Q
    |||||||||| | ||||||||| | |||||||||||||||  ||||||||||| |||| |  |||||| ||||||||||||||| | |||||||    
T  23058444 acaccgacacttgtaattacactggattatgtgatttttttcaaattattaattgtgtgggcgtgtcactgtccgtgtcgtgtcaggtatccgt 23058537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 5473392 - 5473336
Alignment:
Q  62 gtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||| |||||||||||||  ||||||| ||||||||||||||||| |||||||||    
T  5473392 gtgtccgacaccgacacataatattacaccgaattatgtgattttttcaaattatta 5473336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 153
Target Start/End: Complemental strand, 15657921 - 15657837
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    |||||||||  | ||||||||| ||||||||||||||||  ||||||||| | | ||||  |||| |||||||||||||||||||    
T  15657921 acaccgacatttgtaattacactgaattatgtgatttttacaaattattagttgagtcggcgtgttagtgtccgtgtcgtgtccg 15657837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 34691800 - 34691856
Alignment:
Q  62 gtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||| |||||||||||||||||||||| ||||||| ||||||| | |||||||||    
T  34691800 gtgtccgacaccgacacatataattacactgaattatatgattttatcaaattatta 34691856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 34714212 - 34714268
Alignment:
Q  62 gtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||| |||||||||||||||||||||| ||||||| ||||||| | |||||||||    
T  34714212 gtgtccgacaccgacacatataattacactgaattatatgattttatcaaattatta 34714268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 146
Target Start/End: Original strand, 30527599 - 30527674
Alignment:
Q  71 accgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtc 146  Q
    ||||||||||||||||||||  |||||| ||||||| | ||||||||||  |||| | |||||||||||| |||||    
T  30527599 accgacacatataattacactaaattatatgattttctcaaattattaacagtgtgggtgtgtcagtgtcagtgtc 30527674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 153
Target Start/End: Complemental strand, 31018654 - 31018563
Alignment:
Q  62 gtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    |||||| |||||||||| |||||||||||  ||| |||||||||| | |||||||||  ||||| |  |||||||||||| |||||| ||||    
T  31018654 gtgtccgacaccgacacctataattacactaaatcatgtgattttctgaaattattagcggtgttggcgtgtcagtgtccatgtcgtatccg 31018563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 125
Target Start/End: Complemental strand, 39279735 - 39279676
Alignment:
Q  66 ccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgt 125  Q
    ||||||||||||||||||||||||| ||||||| ||||||| | | |||||||| |||||    
T  39279735 ccaacaccgacacatataattacactgaattatttgattttctcatattattaacggtgt 39279676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 163
Target Start/End: Complemental strand, 21624331 - 21624229
Alignment:
Q  62 gtgtccaacaccgacacatataattacacagaattatgtgatttttt-aaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccg 160  Q
    |||||| |||||||||| | ||||||||| ||||||||  ||||||| ||||||||||   ||||||  ||||||||||| ||||||||| || | ||||    
T  21624331 gtgtccgacaccgacacttgtaattacactgaattatgctatttttttaaaattattagctgtgtcggcgtgtcagtgtctgtgtcgtgttcggtgtccg 21624232  T
Q  161 tat 163  Q
    |||    
T  21624231 tat 21624229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 77 - 127
Target Start/End: Complemental strand, 28677958 - 28677908
Alignment:
Q  77 acatataattacacagaattatgtgattttttaaaattattaatggtgtcg 127  Q
    |||||||||||||| ||||||||||||||||| |||||||||  |||||||    
T  28677958 acatataattacactgaattatgtgattttttcaaattattagcggtgtcg 28677908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 73 - 147
Target Start/End: Original strand, 30717536 - 30717610
Alignment:
Q  73 cgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcg 147  Q
    |||||| | ||||||||| ||||||||||||||||| |||||||||    ||||| | |||||||||||||||||    
T  30717536 cgacacttgtaattacactgaattatgtgattttttcaaattattagctttgtcggtttgtcagtgtccgtgtcg 30717610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 64 - 146
Target Start/End: Complemental strand, 37559039 - 37558957
Alignment:
Q  64 gtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtc 146  Q
    |||| |||||||||| | ||||||||  ||||||||||||||||  |||||||||   ||||||  |||||||||||||||||    
T  37559039 gtccgacaccgacacttgtaattacattgaattatgtgatttttacaaattattagctgtgtcggcgtgtcagtgtccgtgtc 37558957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 125
Target Start/End: Original strand, 2665897 - 2665946
Alignment:
Q  76 cacatataattacacagaattatgtgattttttaaaattattaatggtgt 125  Q
    |||||||||||||||  |||||||||||||| ||||||||||| ||||||    
T  2665897 cacatataattacactaaattatgtgattttctaaaattattagtggtgt 2665946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 118
Target Start/End: Original strand, 12668425 - 12668474
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||||||| ||||||||||| ||||||||| ||||||| |||||||||    
T  12668425 acaccgacacttataattacactgaattatgtcattttttcaaattatta 12668474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 28596576 - 28596487
Alignment:
Q  19 gacacttctcggattaggtgtgtcttcatgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgatttttt 108  Q
    |||||| ||||||||||| |||||    ||||| || ||||| |||||| |||||||||| ||||||||||| || ||||||||| ||||    
T  28596576 gacactcctcggattaggagtgtccgagtgtcggacacgtgtcgtgtccgacaccgacacttataattacactgacttatgtgatgtttt 28596487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 161
Target Start/End: Original strand, 40361743 - 40361848
Alignment:
Q  56 cgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgat 155  Q
    ||||| |||||  ||||| ||| ||||||||||||  |||||||| ||||||| ||||||||||| |||||   ||||| || || ||||||||| || |    
T  40361743 cgtgtcgtgtctgacaccaacagatataattacactaaattatgtaattttttcaaattattaatagtgtcatagtgtccgtatctgtgtcgtgttcggt 40361842  T
Q  156 atccgt 161  Q
    ||||||    
T  40361843 atccgt 40361848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 146
Target Start/End: Original strand, 42832278 - 42832355
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtc 146  Q
    |||||||||| ||||||||||| ||| ||||| ||||| | |||||||||  ||||||| |||||| | |||||||||    
T  42832278 acaccgacacttataattacactgaaatatgtaattttctcaaattattagcggtgtcggtgtgtctgagtccgtgtc 42832355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 118
Target Start/End: Complemental strand, 44860377 - 44860328
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||||||||||||||||||| |||||||| |||||| | |||||||||    
T  44860377 acaccgacacatataattacactgaattatgcgattttctcaaattatta 44860328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 140
Target Start/End: Complemental strand, 11670789 - 11670741
Alignment:
Q  92 gaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtc 140  Q
    ||||||||||||||||| ||||||||| ||| ||||| |||||||||||    
T  11670789 gaattatgtgattttttcaaattattagtggcgtcgacgtgtcagtgtc 11670741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 137
Target Start/End: Complemental strand, 17776644 - 17776576
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagt 137  Q
    |||| ||||||||||||||||| || ||||||| |||| | ||||||||| |||| ||| |||||||||    
T  17776644 acactgacacatataattacactgacttatgtggttttcttaaattattattggtatcggtgtgtcagt 17776576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 153
Target Start/End: Complemental strand, 18276578 - 18276494
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    ||||||||||| |||||||||| |||||| |||||||| | |||||||||  |||||||   | |||||||| || |||||||||    
T  18276578 acaccgacacacataattacactgaattaagtgattttctcaaattattagcggtgtcggcatatcagtgtctgtatcgtgtccg 18276494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 153
Target Start/End: Complemental strand, 21091780 - 21091696
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    |||| ||||| | ||||||||| ||| ||||| ||||| | |||||||||  ||||||| ||||||||||||||| | |||||||    
T  21091780 acactgacacttgtaattacactgaagtatgttattttcttaaattattagcggtgtcggtgtgtcagtgtccgtcttgtgtccg 21091696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 161
Target Start/End: Complemental strand, 30335474 - 30335382
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccgt 161  Q
    |||||||||  | |||||||||  |||||||| ||||||| ||||||||| | ||||||  |||  ||||||||||||||||| || ||||||    
T  30335474 acaccgacatttgtaattacactaaattatgtcattttttcaaattattagttgtgtcggcgtgctagtgtccgtgtcgtgtctgagatccgt 30335382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 146
Target Start/End: Complemental strand, 39323308 - 39323244
Alignment:
Q  82 taattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtc 146  Q
    ||||||||| ||||||||| ||||| | |||||||||  |||||||| || ||||||||||||||    
T  39323308 taattacactgaattatgtaattttgtcaaattattagcggtgtcgacgtttcagtgtccgtgtc 39323244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 140
Target Start/End: Original strand, 1239666 - 1239733
Alignment:
Q  73 cgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtc 140  Q
    |||||||||||||||||||  ||||| ||||||| | |||||||||||| |||||  ||||| |||||    
T  1239666 cgacacatataattacacatgattatatgattttcttaaattattaatgatgtcggcgtgtccgtgtc 1239733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 147
Target Start/End: Complemental strand, 2331849 - 2331773
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcg 147  Q
    ||||||||||||| |  ||||| ||||||||||||||| | ||||||||||||||||    |||||| |||||||||||    
T  2331849 acaccgacacataaa--tacactgaattatgtgattttctcaaattattaatggtgtttgcgtgtcaatgtccgtgtcg 2331773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 152
Target Start/End: Original strand, 21782832 - 21782903
Alignment:
Q  81 ataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtcc 152  Q
    |||||||||| ||||||||||||||| | |||||||||   ||||||  ||||||||||  |||||||||||    
T  21782832 ataattacactgaattatgtgattttctcaaattattagcagtgtcggcgtgtcagtgtttgtgtcgtgtcc 21782903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 145
Target Start/End: Complemental strand, 24894433 - 24894370
Alignment:
Q  82 taattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgt 145  Q
    ||||| ||| ||||||||||||||||| |||||||||   ||||||  ||||||||||||||||    
T  24894433 taattgcactgaattatgtgatttttttaaattattagctgtgtcggcgtgtcagtgtccgtgt 24894370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 140
Target Start/End: Original strand, 29970555 - 29970622
Alignment:
Q  73 cgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtc 140  Q
    |||||||||| ||||||| ||| |||| |||||| | |||||||||  |||||| |||||||||||||    
T  29970555 cgacacatatgattacactgaactatgcgattttctcaaattattagcggtgtcaatgtgtcagtgtc 29970622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 112
Target Start/End: Original strand, 20922923 - 20922973
Alignment:
Q  62 gtgtccaacaccgacacatataattacacagaattatgtgattttttaaaa 112  Q
    |||||| |||| |||||||||||||||||  |||||||||||||| |||||    
T  20922923 gtgtccgacacagacacatataattacactaaattatgtgattttctaaaa 20922973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 105
Target Start/End: Complemental strand, 28524485 - 28524447
Alignment:
Q  67 caacaccgacacatataattacacagaattatgtgattt 105  Q
    ||||| |||||||||||||||||| ||||||||||||||    
T  28524485 caacaacgacacatataattacactgaattatgtgattt 28524447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 118
Target Start/End: Complemental strand, 31284118 - 31284056
Alignment:
Q  57 gtgttgtgtccaacaccgacacat-ataattacacagaattatgtgattttttaaaattatta 118  Q
    |||| ||||||||||||||||||| |||||||||  | ||||||||||||| | |||||||||    
T  31284118 gtgtcgtgtccaacaccgacacataataattacaatggattatgtgattttctcaaattatta 31284056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 127
Target Start/End: Original strand, 37411250 - 37411304
Alignment:
Q  73 cgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcg 127  Q
    ||||||||||||| |||| ||||||||||||||| | |||||||||  |||||||    
T  37411250 cgacacatataatcacactgaattatgtgattttctcaaattattagcggtgtcg 37411304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 105
Target Start/End: Complemental strand, 41843500 - 41843462
Alignment:
Q  67 caacaccgacacatataattacacagaattatgtgattt 105  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  41843500 caacaccgacacatataattataccgaattatgtgattt 41843462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 134
Target Start/End: Original strand, 5891785 - 5891845
Alignment:
Q  73 cgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtc 134  Q
    |||||| |||||||||||| |||||||| | ||||||||||||||||  |||||| ||||||    
T  5891785 cgacacttataattacacataattatgt-aatttttaaaattattaactgtgtcggtgtgtc 5891845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 118
Target Start/End: Complemental strand, 18622663 - 18622614
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    ||||| |||| ||||||||||| ||||||||||||||| | |||||||||    
T  18622663 acaccaacacgtataattacactgaattatgtgattttattaaattatta 18622614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 106
Target Start/End: Original strand, 18889593 - 18889630
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgatttt 106  Q
    |||||||||||||| ||||||| |||||||||||||||    
T  18889593 acaccgacacatatgattacactgaattatgtgatttt 18889630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 119
Target Start/End: Complemental strand, 35449565 - 35449520
Alignment:
Q  74 gacacatataattacacagaattatgtgattttttaaaattattaa 119  Q
    ||||||||||||||||| ||||| ||||||||| | ||||||||||    
T  35449565 gacacatataattacactgaattctgtgattttctcaaattattaa 35449520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 106
Target Start/End: Original strand, 38355889 - 38355926
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgatttt 106  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  38355889 acaccgacacatataatcacactgaattatgtgatttt 38355926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 152
Target Start/End: Complemental strand, 10254061 - 10254001
Alignment:
Q  92 gaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtcc 152  Q
    ||||||||| ||||| || |||||||| | |||| ||||||  ||||||||||||||||||    
T  10254061 gaattatgtcattttctacaattattattagtgttgatgtggtagtgtccgtgtcgtgtcc 10254001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 18255975 - 18256031
Alignment:
Q  62 gtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||| |||||||||| | ||||||||   |||||||||||||||| |||||||||    
T  18255975 gtgtccgacaccgacacttctaattacattaaattatgtgatttttttaaattatta 18256031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 146
Target Start/End: Original strand, 21374714 - 21374778
Alignment:
Q  82 taattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtc 146  Q
    ||||||||| ||||||||| ||||||| |||||||||   ||||||  |||| ||||||||||||    
T  21374714 taattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtc 21374778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 34337202 - 34337270
Alignment:
Q  93 aattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccgt 161  Q
    |||||||||||||||| ||||||| ||  ||||||  |||||| |||||||||||| | || |||||||    
T  34337202 aattatgtgattttttcaaattatcaactgtgtcggcgtgtcaatgtccgtgtcgtatacggtatccgt 34337270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 2e-24; HSPs: 82)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 176
Target Start/End: Complemental strand, 55401182 - 55401025
Alignment:
Q  19 gacacttctcggattaggtgtgtcttcatgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||| ||||||||||| ||||||   ||||| || ||||| |||||| |||||||||| | |||||||||  |||||||||||||||| |||||||||    
T  55401182 gacactcctcggattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 55401083  T
Q  119 atggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccgtatatttgctacatag 176  Q
     | ||||||  || |||||||||||||||| |||| | ||||||| | |||| |||||    
T  55401082 gttgtgtcggcgtatcagtgtccgtgtcgtatccggtgtccgtatctgtgcttcatag 55401025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 143
Target Start/End: Complemental strand, 18427056 - 18426932
Alignment:
Q  19 gacacttctcggattaggtgtgtcttcatgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||| ||| |||||||||||||    || || || ||||| || ||| ||||||||| |||||||||||| ||||||||||||||||| |||||||||    
T  18427056 gacactcctcagattaggtgtgtcccggtgccggacacgtgtcgtatccgacaccgacatatataattacaccgaattatgtgattttttgaaattatta 18426957  T
Q  119 atggtgtcgatgtgtcagtgtccgt 143  Q
     ||||||||  ||||| ||||||||    
T  18426956 gtggtgtcggcgtgtccgtgtccgt 18426932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 57 - 153
Target Start/End: Complemental strand, 25093571 - 25093475
Alignment:
Q  57 gtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    ||||||||||| |||||||||||||||||||||| ||||| ||||||||| | |||| |||||  ||||||  |||| |||||| ||||||||||||    
T  25093571 gtgttgtgtccgacaccgacacatataattacactgaattgtgtgattttctcaaatcattaacagtgtcggcgtgttagtgtcagtgtcgtgtccg 25093475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 62 - 152
Target Start/End: Complemental strand, 8383321 - 8383231
Alignment:
Q  62 gtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtcc 152  Q
    |||||| |||||||||| ||||||||||| ||||||| ||||||| | |||||||||  |||||||  |||||| ||||||||||||||||    
T  8383321 gtgtccgacaccgacacttataattacactgaattatatgattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtcgtgtcc 8383231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 69 - 151
Target Start/End: Complemental strand, 14216949 - 14216867
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtc 151  Q
    |||| ||||| | ||||||||| ||||||| |||| |||||||||||||| | ||||||| ||||||||||||||||||||||    
T  14216949 acacggacacttgtaattacactgaattatatgatattttaaaattattagttgtgtcgacgtgtcagtgtccgtgtcgtgtc 14216867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 69 - 151
Target Start/End: Complemental strand, 14223078 - 14222996
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtc 151  Q
    |||| ||||| | ||||||||| ||||||| |||| |||||||||||||| | ||||||| ||||||||||||||||||||||    
T  14223078 acacggacacttgtaattacactgaattatatgatattttaaaattattagttgtgtcgacgtgtcagtgtccgtgtcgtgtc 14222996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 40993287 - 40993409
Alignment:
Q  19 gacacttctcggattaggtgtgtcttcatgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtga-ttttttaaaattatt 117  Q
    |||||| ||||||||||| |||||    ||||| ||  |||| |||||| |||||||||||||||||||||| ||||||||||| |||||| ||||||||    
T  40993287 gacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattatgtgattttttttaaattatt 40993386  T
Q  118 aatggtgtcgatgtgtcagtgtc 140  Q
    |  |||||||| ||||| |||||    
T  40993387 agcggtgtcgaggtgtccgtgtc 40993409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 62 - 127
Target Start/End: Complemental strand, 7928514 - 7928449
Alignment:
Q  62 gtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcg 127  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||  |||||||    
T  7928514 gtgtccgacaccgacacatataattacactgaattatgtgattttttcaaattattagcggtgtcg 7928449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 26 - 146
Target Start/End: Complemental strand, 10955052 - 10954932
Alignment:
Q  26 ctcggattaggtgtgtcttcatgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgt 125  Q
    ||||||||||| |||||    ||||| || ||||| |||||| |||||||||| | | ||||||| ||||||||||||||||| ||||||||| | ||||    
T  10955052 ctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgacaccgacacttgtgattacactgaattatgtgattttttcaaattattagttgtgt 10954953  T
Q  126 cgatgtgtcagtgtccgtgtc 146  Q
    ||  |||||||||| ||||||    
T  10954952 cggcgtgtcagtgttcgtgtc 10954932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 66 - 146
Target Start/End: Complemental strand, 29508504 - 29508424
Alignment:
Q  66 ccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtc 146  Q
    |||||| |||||||||||||||||| ||||||| ||||||||| ||||||||| |||| ||| ||||||| ||||| ||||    
T  29508504 ccaacatcgacacatataattacactgaattatatgattttttcaaattattagtggtatcggtgtgtcaatgtccatgtc 29508424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 69 - 153
Target Start/End: Complemental strand, 38731275 - 38731191
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||  ||| ||||  |||| |||| | |||||||||||    
T  38731275 acaccgacacatataactacactgaattatgtgattttttaaaattattagcggtatcgacatgtcggtgtacatgtcgtgtccg 38731191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 28918116 - 28917974
Alignment:
Q  13 agcagagacacttctcggattaggtgtgtcttcatgtcgaactcgtgttgtgtcca--acaccgacacatataattacacagaattatgtgattttttaa 110  Q
    ||||| |||||| || |||||||| |||||    ||||| || ||||| |||||||  |||||||||| | ||||||||| ||||||||||||||||| |    
T  28918116 agcagggacactccttggattaggcgtgtcccagtgtcggacacgtgtcgtgtccacgacaccgacacttgtaattacactgaattatgtgattttttca 28918017  T
Q  111 aattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    ||||||||    |||||  |||||||| |||||||||||||||    
T  28918016 aattattagctatgtcggcgtgtcagtttccgtgtcgtgtccg 28917974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 11493372 - 11493441
Alignment:
Q  78 catataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcg 147  Q
    ||||||||||||| ||||||||||||||| | | ||||||| ||||||||| |||||| |||||||||||    
T  11493372 catataattacactgaattatgtgattttctcacattattagtggtgtcgacgtgtcaatgtccgtgtcg 11493441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 163
Target Start/End: Original strand, 8587017 - 8587117
Alignment:
Q  63 tgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccgta 162  Q
    ||||| |||||||||| | |||||||||  |||||||||||||||| |||||| ||   ||||||  ||||||||||||||||| |||||| | ||||||    
T  8587017 tgtccgacaccgacacttgtaattacacttaattatgtgattttttcaaattactagatgtgtcggcgtgtcagtgtccgtgtcatgtccggtgtccgta 8587116  T
Q  163 t 163  Q
    |    
T  8587117 t 8587117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 73 - 153
Target Start/End: Complemental strand, 11658868 - 11658788
Alignment:
Q  73 cgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    ||||||||||||| |||| |||||||| |||||| | |||||||||| | ||| | |||||||||||| ||||||||||||    
T  11658868 cgacacatataatcacactgaattatgcgattttctcaaattattaacgatgttggtgtgtcagtgtctgtgtcgtgtccg 11658788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 152
Target Start/End: Original strand, 14840304 - 14840376
Alignment:
Q  80 tataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtcc 152  Q
    ||||||||||| ||||||||||||||| | |||||||||||||||| |  ||||| || ||||||||||||||    
T  14840304 tataattacactgaattatgtgattttctgaaattattaatggtgttggcgtgtcggtatccgtgtcgtgtcc 14840376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 153
Target Start/End: Original strand, 15796296 - 15796380
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    |||||||||  | ||||||||| ||||||| ||||||||| ||||||||||  ||||||  |||||| |||||||||||||||||    
T  15796296 acaccgacaattgtaattacactgaattatatgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccg 15796380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 16000011 - 16000099
Alignment:
Q  62 gtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgt 150  Q
    |||||| |||||||||| | || |||||| ||||||||| ||||||| ||||||||| | ||||||  ||||||||||| |||||||||    
T  16000011 gtgtccgacaccgacacttgtagttacactgaattatgttatttttttaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgt 16000099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 57 - 116
Target Start/End: Original strand, 8789540 - 8789599
Alignment:
Q  57 gtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattat 116  Q
    |||| |||||| |||||||||||||||||||||| ||||||||||||||| | |||||||    
T  8789540 gtgtcgtgtccgacaccgacacatataattacacggaattatgtgattttctcaaattat 8789599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 69 - 152
Target Start/End: Complemental strand, 9800097 - 9800014
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtcc 152  Q
    |||||||||| || |||||||| ||||||||| ||||| | |||||||||  |||||||  |||||||||| ||||||||||||    
T  9800097 acaccgacacttacaattacacggaattatgtaattttctcaaattattagaggtgtcggcgtgtcagtgtacgtgtcgtgtcc 9800014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 57 - 140
Target Start/End: Complemental strand, 20503534 - 20503451
Alignment:
Q  57 gtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtc 140  Q
    |||| ||||||||||||||||| | ||||||||| ||||||||| ||||||| ||||||||  | ||||||  |||||||||||    
T  20503534 gtgtcgtgtccaacaccgacacttgtaattacactgaattatgtcattttttcaaattatttgttgtgtcggcgtgtcagtgtc 20503451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 69 - 140
Target Start/End: Complemental strand, 26290428 - 26290357
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtc 140  Q
    |||| |||||||||||||| || ||| ||||||||||| | ||||||||||||||||||  |||||||||||    
T  26290428 acactgacacatataattaaaccgaactatgtgattttctcaaattattaatggtgtcggcgtgtcagtgtc 26290357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 73 - 123
Target Start/End: Original strand, 8930836 - 8930886
Alignment:
Q  73 cgacacatataattacacagaattatgtgattttttaaaattattaatggt 123  Q
    |||||||||||||||||  |||||||||||||||||||||||||| |||||    
T  8930836 cgacacatataattacatcgaattatgtgattttttaaaattatttatggt 8930886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 141
Target Start/End: Original strand, 17005619 - 17005693
Alignment:
Q  67 caacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtcc 141  Q
    |||||||||||| ||||||||||| ||||||| ||||||| | ||||||||| |||||| | || ||||||||||    
T  17005619 caacaccgacacttataattacactgaattatatgattttatcaaattattagtggtgttggtgagtcagtgtcc 17005693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 119
Target Start/End: Original strand, 24633391 - 24633453
Alignment:
Q  57 gtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaa 119  Q
    |||| ||||||||||||||||||||||||||||  |||||| |||||||||  ||||||||||    
T  24633391 gtgtcgtgtccaacaccgacacatataattacattgaattacgtgatttttccaaattattaa 24633453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 153
Target Start/End: Original strand, 10335275 - 10335372
Alignment:
Q  56 cgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    ||||| ||| || |||||||||| | || ||||||  || ||||||| ||||| ||||||||| | ||||||  ||||||||||||||||||||||||    
T  10335275 cgtgtcgtgcccgacaccgacacttgtatttacactaaaatatgtgactttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccg 10335372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 85 - 153
Target Start/End: Original strand, 3164043 - 3164111
Alignment:
Q  85 ttacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    |||||| ||||||||||||||||| |||||||||   ||||||| ||| || |||||||||||||||||    
T  3164043 ttacactgaattatgtgattttttcaaattattagctgtgtcgacgtgccattgtccgtgtcgtgtccg 3164111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 163
Target Start/End: Complemental strand, 8842436 - 8842293
Alignment:
Q  19 gacacttctcggattaggtgtgtcttcatgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||| ||||||||||| ||||||  || || |||  |||| |||||  ||||||||| ||||||||||||  |||||||||| |||| ||||||||||    
T  8842436 gacactcctcggattaggcgtgtctcaatatctaacatgtgtcgtgtctgacaccgacatatataattacaccaaattatgtga-ttttcaaaattatta 8842338  T
Q  119 atggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccgtat 163  Q
      |||||||   ||||| | |||||||||| |||| | |||||||    
T  8842337 gcggtgtcggcatgtcaatttccgtgtcgtatccggtgtccgtat 8842293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 153
Target Start/End: Complemental strand, 11666001 - 11665917
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    ||||||||||||||||||||||  |||| ||||||||| | |||||||||  | ||||| ||||| |||||  ||||||||||||    
T  11666001 acaccgacacatataattacactaaattgtgtgattttatcaaattattagcgttgtcggtgtgttagtgtgtgtgtcgtgtccg 11665917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 73 - 153
Target Start/End: Original strand, 24205047 - 24205127
Alignment:
Q  73 cgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    |||||| ||||||||||| | ||||||| ||||| | |||||||||   ||||||  ||||||||||||||||||||||||    
T  24205047 cgacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcgtgtccg 24205127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 57 - 153
Target Start/End: Original strand, 26492195 - 26492291
Alignment:
Q  57 gtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    |||| |||||| ||||||| || | ||||||||| ||||| | ||||||||| |||||||||    |||||  ||||||||||||||||||||||||    
T  26492195 gtgtcgtgtccgacaccgatacttgtaattacactgaattgtatgattttttcaaattattagctctgtcggcgtgtcagtgtccgtgtcgtgtccg 26492291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 153
Target Start/End: Original strand, 41961652 - 41961736
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    |||||||||| | ||||||||| |||| ||||||| |||| ||||||||| | ||| ||  ||||||||||| ||||||||||||    
T  41961652 acaccgacacttgtaattacaccgaataatgtgatattttcaaattattagttgtgacggcgtgtcagtgtctgtgtcgtgtccg 41961736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 148
Target Start/End: Original strand, 10268488 - 10268567
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgt 148  Q
    |||| ||||| | |||||||||  |||||||||||||||| ||||||||||  ||||||  |||||||||||| ||||||    
T  10268488 acactgacacttgtaattacactaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccatgtcgt 10268567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 134
Target Start/End: Original strand, 16192758 - 16192817
Alignment:
Q  75 acacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtc 134  Q
    |||||||||||||||| ||||||||| ||||| | |||||||||| ||||||| ||||||    
T  16192758 acacatataattacactgaattatgttattttctcaaattattaacggtgtcggtgtgtc 16192817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 153
Target Start/End: Original strand, 30184106 - 30184193
Alignment:
Q  67 caacaccgacacatataattacacagaattatgtga-ttttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    |||||||||||||| ||||||||| ||||||||| | |||||| | ||||||| || ||| ||||||||||||||  ||| |||||||    
T  30184106 caacaccgacacatgtaattacactgaattatgtcatttttttcagattattattgctgttgatgtgtcagtgtctatgttgtgtccg 30184193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 149
Target Start/End: Original strand, 32804547 - 32804622
Alignment:
Q  74 gacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtg 149  Q
    |||||||||||||||||  |||||||||||||| | |||||||||| |||||||   ||||| || ||||||||||    
T  32804547 gacacatataattacactaaattatgtgattttctcaaattattaacggtgtcggcatgtcaatgcccgtgtcgtg 32804622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 118
Target Start/End: Complemental strand, 11252089 - 11251986
Alignment:
Q  13 agcagagacacttctcggattaggtgtgtcttcatgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaa 112  Q
    |||| ||||||| ||||||||||| ||||    ||| || || |||||||||||  |||||||||||||  ||||||| ||||||||||||||| | |||    
T  11252089 agcacagacactcctcggattaggcgtgttccgatgccggacacgtgttgtgtctgacaccgacacata--attacactgaattatgtgattttctcaaa 11251992  T
Q  113 ttatta 118  Q
    ||||||    
T  11251991 ttatta 11251986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 127
Target Start/End: Complemental strand, 14209170 - 14209112
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcg 127  Q
    |||| ||||| | ||||||||| ||||||||||||||||||||||||||| | ||||||    
T  14209170 acactgacacttgtaattacactgaattatgtgattttttaaaattattagttgtgtcg 14209112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 153
Target Start/End: Original strand, 750620 - 750705
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtc-agtgtccgtgtcgtgtccg 153  Q
    |||||||||| | ||||| ||  |||||||||||| |||| ||||||||| | ||||||  ||||| |||||||||||||||||||    
T  750620 acaccgacacttgtaattgcagcgaattatgtgatattttcaaattattagttgtgtcgccgtgtcaagtgtccgtgtcgtgtccg 750705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 15314878 - 15314935
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtc 126  Q
    ||||| ||||||||||||||||  |||||||||||||||| |||||| |||| |||||    
T  15314878 acaccaacacatataattacactaaattatgtgattttttcaaattaataattgtgtc 15314935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 140
Target Start/End: Complemental strand, 15544744 - 15544679
Alignment:
Q  75 acacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtc 140  Q
    ||||| ||||||| |||||||||||||||||| | |||||||||  |||||| | |||||||||||    
T  15544744 acacacataattatacagaattatgtgattttatcaaattattagcggtgtcaacgtgtcagtgtc 15544679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 146
Target Start/End: Original strand, 22774072 - 22774149
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtc 146  Q
    |||||||||| ||||||||||| ||| ||||||| ||| |  |||||||| ||||||||| ||||| ||||| |||||    
T  22774072 acaccgacacttataattacactgaaatatgtgactttgtctaattattagtggtgtcgacgtgtctgtgtctgtgtc 22774149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 118
Target Start/End: Original strand, 25948889 - 25948938
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    ||||| |||| ||||||||||| ||||||||||||||||| |||||||||    
T  25948889 acaccaacacttataattacactgaattatgtgattttttcaaattatta 25948938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 112
Target Start/End: Complemental strand, 35223001 - 35222952
Alignment:
Q  63 tgtccaacaccgacacatataattacacagaattatgtgattttttaaaa 112  Q
    ||||| |||||||||||||||||||||  ||||||||||||||| |||||    
T  35223001 tgtccgacaccgacacatataattacattgaattatgtgattttctaaaa 35222952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 118
Target Start/End: Original strand, 51206347 - 51206404
Alignment:
Q  61 tgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    ||||||| |||||||||| | || |||||| ||||||||||||||||| |||||||||    
T  51206347 tgtgtccgacaccgacacttgtatttacactgaattatgtgattttttcaaattatta 51206404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 153
Target Start/End: Original strand, 2620079 - 2620139
Alignment:
Q  93 aattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    |||||||||||||| | |||| |||| ||||||||  ||||||||||||| ||||||||||    
T  2620079 aattatgtgattttctcaaatgattagtggtgtcggcgtgtcagtgtccgagtcgtgtccg 2620139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 125
Target Start/End: Complemental strand, 4201453 - 4201397
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgt 125  Q
    ||||| ||| ||||||||||||  |||||||||||||||| |||||||||| |||||    
T  4201453 acaccaacatatataattacacttaattatgtgattttttcaaattattaacggtgt 4201397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 153
Target Start/End: Complemental strand, 25064954 - 25064882
Alignment:
Q  81 ataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    ||||||||||  |||||||||||||||| |||| ||||  |||||||  |||||| |||| ||||||||||||    
T  25064954 ataattacactaaattatgtgattttttcaaatcattagcggtgtcggcgtgtcaatgtctgtgtcgtgtccg 25064882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 141
Target Start/End: Complemental strand, 25775573 - 25775493
Alignment:
Q  62 gtgtccaacaccgacacatataattacacagaattatgtgatt-ttttaaaattattaatggtgtcgatgtgtcagtgtcc 141  Q
    |||||| |||||||||| | ||||||||| ||||||||||||| |||| ||||||||||  |||| |  ||||||||||||    
T  25775573 gtgtccgacaccgacacttgtaattacactgaattatgtgattattttcaaattattaaatgtgttggcgtgtcagtgtcc 25775493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 118
Target Start/End: Complemental strand, 26508166 - 26508118
Alignment:
Q  70 caccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    ||||||||| | ||||||||| ||||||||||||||||| |||||||||    
T  26508166 caccgacacttgtaattacactgaattatgtgattttttcaaattatta 26508118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 143
Target Start/End: Original strand, 29112292 - 29112356
Alignment:
Q  79 atataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgt 143  Q
    |||||||||||| ||||||| ||||||| | |||| |||| ||||||| | ||||||||||||||    
T  29112292 atataattacactgaattatatgattttctcaaataattagtggtgtcaacgtgtcagtgtccgt 29112356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 152
Target Start/End: Complemental strand, 35312108 - 35312028
Alignment:
Q  72 ccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtcc 152  Q
    ||||||| | ||||||||| ||||||||| |  |||| ||||||||||  |||||||  | ||||||||||||||||||||    
T  35312108 ccgacacttgtaattacactgaattatgtaacatttttaaattattaaatgtgtcgacatatcagtgtccgtgtcgtgtcc 35312028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 49505149 - 49505205
Alignment:
Q  62 gtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||| |||| |||||||||||||||||  |||||||||||||| | |||||||||    
T  49505149 gtgtccgacactgacacatataattacactaaattatgtgattttctcaaattatta 49505205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 153
Target Start/End: Complemental strand, 3610677 - 3610606
Alignment:
Q  82 taattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    ||||||||| || |||||| ||||||| ||||||||||  |||| |  ||||||||||| ||||||||||||    
T  3610677 taattacactgagttatgttatttttttaaattattaactgtgttggcgtgtcagtgtctgtgtcgtgtccg 3610606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 140
Target Start/End: Original strand, 3962791 - 3962866
Alignment:
Q  65 tccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtc 140  Q
    ||||||||||||||||||||| |||| || |||||| ||||| | |||| ||||| |||||||  ||||| |||||    
T  3962791 tccaacaccgacacatataataacactgagttatgttattttcttaaataattaagggtgtcggagtgtcggtgtc 3962866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 112
Target Start/End: Complemental strand, 13414534 - 13414483
Alignment:
Q  61 tgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaa 112  Q
    ||||||| |||||||||||||||||||||  ||||||| ||||||| |||||    
T  13414534 tgtgtccgacaccgacacatataattacattgaattatttgattttctaaaa 13414483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 140
Target Start/End: Original strand, 46191371 - 46191418
Alignment:
Q  93 aattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtc 140  Q
    |||||||||||||| | ||||||||| ||||||||||||||| |||||    
T  46191371 aattatgtgattttctcaaattattattggtgtcgatgtgtccgtgtc 46191418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 106
Target Start/End: Complemental strand, 2941628 - 2941578
Alignment:
Q  56 cgtgttgtgtccaacaccgacacatataattacacagaattatgtgatttt 106  Q
    ||||| |||||| |||||||||||||||||||||| | ||| |||||||||    
T  2941628 cgtgtcgtgtccgacaccgacacatataattacactgtattttgtgatttt 2941578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 150
Target Start/End: Original strand, 4990972 - 4991050
Alignment:
Q  72 ccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgt 150  Q
    ||||||| | ||||||||| ||||||||| ||||| | ||| |||||  |||||||  |||||||| ||||||||||||    
T  4990972 ccgacacttgtaattacactgaattatgtaattttctcaaactattagcggtgtcggagtgtcagtctccgtgtcgtgt 4991050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 106
Target Start/End: Original strand, 6780408 - 6780458
Alignment:
Q  56 cgtgttgtgtccaacaccgacacatataattacacagaattatgtgatttt 106  Q
    |||||||||||| ||||| |||||||||||||||| ||| || ||||||||    
T  6780408 cgtgttgtgtccgacaccaacacatataattacactgaactacgtgatttt 6780458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 119
Target Start/End: Original strand, 7614417 - 7614467
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaa 119  Q
    ||||||||| ||||||||| || ||||||||||||||| | ||||||||||    
T  7614417 acaccgacatatataattatactgaattatgtgattttcttaaattattaa 7614467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 127
Target Start/End: Complemental strand, 12704056 - 12704006
Alignment:
Q  77 acatataattacacagaattatgtgattttttaaaattattaatggtgtcg 127  Q
    |||||||||||||| |||||||||| |||| | ||||||||| ||||||||    
T  12704056 acatataattacactgaattatgtgcttttctcaaattattagtggtgtcg 12704006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 112
Target Start/End: Original strand, 13845520 - 13845570
Alignment:
Q  62 gtgtccaacaccgacacatataattacacagaattatgtgattttttaaaa 112  Q
    |||||| |||||||||||||||||||||| | ||| ||||||||| |||||    
T  13845520 gtgtccgacaccgacacatataattacactgcattttgtgattttctaaaa 13845570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 153
Target Start/End: Complemental strand, 14979224 - 14979154
Alignment:
Q  83 aattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    |||||||| ||||||||||||||||| |||||||||   ||||||  ||| || ||||| |||||||||||    
T  14979224 aattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgccattgtccttgtcgtgtccg 14979154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 119
Target Start/End: Complemental strand, 16789069 - 16789019
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaa 119  Q
    ||||| |||| ||||||||||| ||||||| ||||||||| ||||||||||    
T  16789069 acaccaacacttataattacactgaattatatgatttttttaaattattaa 16789019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 127
Target Start/End: Complemental strand, 34910374 - 34910316
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcg 127  Q
    |||||||| | | ||||||||| ||||||||||||||||| ||||||||| | ||||||    
T  34910374 acaccgactcttgtaattacactgaattatgtgattttttcaaattattagttgtgtcg 34910316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 119
Target Start/End: Complemental strand, 55213020 - 55212970
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaa 119  Q
    |||||||||| | ||||| |||  |||||||||||||||||||||||||||    
T  55213020 acaccgacacttgtaattgcactaaattatgtgattttttaaaattattaa 55212970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 118
Target Start/End: Complemental strand, 1509596 - 1509547
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||||||| | |||||||||  |||||||||||||||| |||||||||    
T  1509596 acaccgacacttgtaattacactaaattatgtgattttttcaaattatta 1509547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 139
Target Start/End: Original strand, 4987306 - 4987363
Alignment:
Q  82 taattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgt 139  Q
    ||||||||| ||||||||||||||||| |||||||||   ||||||  ||||||||||    
T  4987306 taattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 4987363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 118
Target Start/End: Original strand, 8039837 - 8039886
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||||||||||||||||||| ||||||| | ||||| | |||||||||    
T  8039837 acaccgacacatataattacactgaattatataattttctcaaattatta 8039886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 118
Target Start/End: Complemental strand, 20691376 - 20691327
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||||||||||| ||||||| ||||||||| ||||| | |||||||||    
T  20691376 acaccgacacatatgattacactgaattatgtcattttctcaaattatta 20691327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 118
Target Start/End: Complemental strand, 27505303 - 27505254
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||||||| | |||||||||  ||||||||||||||| ||||||||||    
T  27505303 acaccgacacttgtaattacacttaattatgtgatttttaaaaattatta 27505254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 118
Target Start/End: Original strand, 34185125 - 34185174
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||||||| | ||||||||| ||||| ||||||||||| |||||||||    
T  34185125 acaccgacacttgtaattacactgaattgtgtgattttttgaaattatta 34185174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 118
Target Start/End: Complemental strand, 45451622 - 45451561
Alignment:
Q  57 gtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||| |||||| |||||||||||||| |||| || ||| ||||||||||| | |||||||||    
T  45451622 gtgtcgtgtccgacaccgacacatattattatactgaagtatgtgattttctcaaattatta 45451561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 118
Target Start/End: Original strand, 49651788 - 49651837
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||||||| | ||||||||  ||||||||||||||||| |||||||||    
T  49651788 acaccgacacttgtaattacagtgaattatgtgattttttcaaattatta 49651837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 106
Target Start/End: Original strand, 11507470 - 11507514
Alignment:
Q  62 gtgtccaacaccgacacatataattacacagaattatgtgatttt 106  Q
    |||||| | ||||| |||||||||||||| |||||||||||||||    
T  11507470 gtgtccgataccgaaacatataattacactgaattatgtgatttt 11507514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 162
Target Start/End: Complemental strand, 11610561 - 11610485
Alignment:
Q  86 tacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccgta 162  Q
    ||||| ||||||||||||||||| |||||||||  ||||| |  |||||||| || |||| ||||| ||| ||||||    
T  11610561 tacactgaattatgtgatttttttaaattattagcggtgttggcgtgtcagtatctgtgttgtgtctgatgtccgta 11610485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 120
Target Start/End: Original strand, 15505780 - 15505844
Alignment:
Q  57 gtgttgtgtccaacaccgacacatataattacacagaattatgtga-ttttttaaaattattaat 120  Q
    ||||||||||| ||||| |||| ||||||||||| ||||||| | | |||||| |||||||||||    
T  15505780 gtgttgtgtccgacaccaacacttataattacactgaattatataattttttttaaattattaat 15505844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 146
Target Start/End: Complemental strand, 21720824 - 21720744
Alignment:
Q  67 caacaccgacacatataa-ttacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtc 146  Q
    |||||||  ||||||||| |||||| |||||||| ||| || | |||||||||  |||||||  |||||||||||||||||    
T  21720824 caacaccaccacatataaattacactgaattatgagatattctcaaattattatcggtgtcggcgtgtcagtgtccgtgtc 21720744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 164
Target Start/End: Original strand, 32429393 - 32429477
Alignment:
Q  80 tataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccgtata 164  Q
    ||||||| ||| ||||||||||||||| | |||||||||  | |||||  |||||| ||| ||||| ||||||| | ||||||||    
T  32429393 tataattgcactgaattatgtgattttcttaaattattagcgttgtcggagtgtcaatgttcgtgttgtgtccggtgtccgtata 32429477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 139
Target Start/End: Complemental strand, 49765323 - 49765287
Alignment:
Q  103 ttttttaaaattattaatggtgtcgatgtgtcagtgt 139  Q
    ||||||||||||||||  |||||||||||||||||||    
T  49765323 ttttttaaaattattatcggtgtcgatgtgtcagtgt 49765287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 128
Target Start/End: Original strand, 50916046 - 50916082
Alignment:
Q  92 gaattatgtgattttttaaaattattaatggtgtcga 128  Q
    ||||||||| ||||||||||||||||| |||||||||    
T  50916046 gaattatgttattttttaaaattattattggtgtcga 50916082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 1e-22; HSPs: 78)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 20549896 - 20549778
Alignment:
Q  21 cacttctcggattaggtgtgtcttcatgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaat 120  Q
    |||| ||||||||||| ||||||   ||||| ||  ||||||||||| |||||||||||||||||||||| |||||| |||||||| | |||||||||      
T  20549896 cactcctcggattaggcgtgtctcattgtcggacatgtgttgtgtccgacaccgacacatataattacactgaattacgtgattttctcaaattattagc 20549797  T
Q  121 ggtgtcgatgtgtcagtgt 139  Q
    ||||||| |||||||||||    
T  20549796 ggtgtcggtgtgtcagtgt 20549778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 62 - 151
Target Start/End: Complemental strand, 26733368 - 26733279
Alignment:
Q  62 gtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtc 151  Q
    |||||| |||||||||||| |||||| || ||||||||||||||| | |||||||||  |||||||| ||||||||||||||||||||||    
T  26733368 gtgtccgacaccgacacatttaattagactgaattatgtgattttgtcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgtc 26733279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 15902881 - 15902795
Alignment:
Q  67 caacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    ||||||||||||||||||||||||  |||||||||||||| | ||||||||| ||||||||   |||||||||| ||||||||||||    
T  15902881 caacaccgacacatataattacactaaattatgtgattttatcaaattattattggtgtcggcatgtcagtgtctgtgtcgtgtccg 15902795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 69 - 163
Target Start/End: Complemental strand, 27945098 - 27945004
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccgtat 163  Q
    |||||||||| | ||||||||| ||||||||| ||||| | ||||||||| ||||||||  |||||||||||||||||||||||| | |||||||    
T  27945098 acaccgacacttgtaattacactgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtat 27945004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 153
Target Start/End: Complemental strand, 17851489 - 17851404
Alignment:
Q  68 aacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    ||||| ||||||||||||||||| ||||||||||||||| |||||||||||  ||| |||||||||| || ||| |||||||||||    
T  17851489 aacacagacacatataattacactgaattatgtgattttctaaaattattagcggtatcgatgtgtcggtatccatgtcgtgtccg 17851404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 598315 - 598183
Alignment:
Q  19 gacacttctcggattaggtgtgtcttcatgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||||||||||||||| |||||    ||||| || ||||| |||||  |||||||||| || |||||||   ||||| |||||||| | |||||||||    
T  598315 gacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacacttacaattacatttaattacgtgattttcttaaattatta 598216  T
Q  119 atggtgtcgatgtgtcagtgtccgtgtcgtgtc 151  Q
      |||||||||||||||||||||||||| ||||    
T  598215 gcggtgtcgatgtgtcagtgtccgtgtcatgtc 598183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 1433511 - 1433430
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgt 150  Q
    ||||||||||||||||||||||  ||| |||||||||| | |||||||||| |||||||  |||||| ||||||||||||||    
T  1433511 acaccgacacatataattacaccaaatgatgtgattttctcaaattattaacggtgtcggcgtgtcaatgtccgtgtcgtgt 1433430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 69 - 161
Target Start/End: Original strand, 11061078 - 11061170
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccgt 161  Q
    |||||||||| | |||||| ||  |||||||||||||||| |||||||||   |||||| |||||||||||||||||||| |||||| |||||    
T  11061078 acaccgacacttgtaattatactaaattatgtgattttttcaaattattagctgtgtcggtgtgtcagtgtccgtgtcgtatccgatgtccgt 11061170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 69 - 140
Target Start/End: Original strand, 9408336 - 9408407
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtc 140  Q
    |||||||||| | |||||||||  |||||||||||||||| ||||||||||| |||||| ||||||||||||    
T  9408336 acaccgacacttgtaattacactaaattatgtgattttttcaaattattaattgtgtcggtgtgtcagtgtc 9408407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 74 - 153
Target Start/End: Complemental strand, 22868094 - 22868015
Alignment:
Q  74 gacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    ||||||||||||||||| ||||||||||||||| | | ||||||| ||||||||  ||||||||||| |||| |||||||    
T  22868094 gacacatataattacactgaattatgtgattttctcatattattagtggtgtcggcgtgtcagtgtcggtgttgtgtccg 22868015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 69 - 163
Target Start/End: Complemental strand, 24339699 - 24339605
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccgtat 163  Q
    |||||||||| | ||||||||| ||||||||||||||||| |||||||||   ||||||  |||||| ||||| ||||||||||| | |||||||    
T  24339699 acaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcaatgtccatgtcgtgtccggtgtccgtat 24339605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 57 - 139
Target Start/End: Complemental strand, 41020565 - 41020483
Alignment:
Q  57 gtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgt 139  Q
    |||| |||| |||||||||| |||||||||||||  |||||||||||||||  ||||||||| | ||||||| ||||||||||    
T  41020565 gtgtcgtgttcaacaccgacgcatataattacactaaattatgtgatttttgtaaattattagttgtgtcgacgtgtcagtgt 41020483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 22602712 - 22602793
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgt 150  Q
    |||||||||||||||||||||| ||||||||||||||| | |||| ||| | |||||||  ||||||||| | |||||||||    
T  22602712 acaccgacacatataattacactgaattatgtgattttctcaaataatttacggtgtcggcgtgtcagtgcctgtgtcgtgt 22602793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 161
Target Start/End: Complemental strand, 19206107 - 19206015
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccgt 161  Q
    ||||||||||||||||||| |  ||||||||||||||| | |||||||||  |||||||  ||||  |||||||||||||||| | |||||||    
T  19206107 acaccgacacatataattataatgaattatgtgattttctcaaattattagcggtgtcggcgtgttggtgtccgtgtcgtgtctggtatccgt 19206015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 152
Target Start/End: Original strand, 26329387 - 26329467
Alignment:
Q  72 ccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtcc 152  Q
    ||||||||||||||||||| ||||| |||| |||| | |||||||||| | |||||  ||||||||||| |||||||||||    
T  26329387 ccgacacatataattacactgaattgtgtgtttttctcaaattattaacgatgtcggcgtgtcagtgtctgtgtcgtgtcc 26329467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 127
Target Start/End: Original strand, 27093373 - 27093473
Alignment:
Q  27 tcggattaggtgtgtcttcatgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtc 126  Q
    |||||||||||||||| |  ||||| || | ||| ||||| ||||||||| |||||||||||||  |||||||||||||| | |||||||||  ||||||    
T  27093373 tcggattaggtgtgtcctagtgtcggacacatgtcgtgtctaacaccgacgcatataattacactaaattatgtgattttcttaaattattagcggtgtc 27093472  T
Q  127 g 127  Q
    |    
T  27093473 g 27093473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 127
Target Start/End: Complemental strand, 27184928 - 27184828
Alignment:
Q  27 tcggattaggtgtgtcttcatgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtc 126  Q
    |||||||||||||||| |  ||||| || | ||| ||||| ||||||||| |||||||||||||  |||||||||||||| | |||||||||  ||||||    
T  27184928 tcggattaggtgtgtcctagtgtcggacacatgtcgtgtctaacaccgacgcatataattacactaaattatgtgattttcttaaattattagcggtgtc 27184829  T
Q  127 g 127  Q
    |    
T  27184828 g 27184828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 64 - 143
Target Start/End: Complemental strand, 9482996 - 9482917
Alignment:
Q  64 gtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgt 143  Q
    |||| |||||||||||||||||||||| ||||| ||||||||| | ||||||| |  | ||||| |||||||||||||||    
T  9482996 gtccgacaccgacacatataattacactgaattgtgtgattttctcaaattatcagcgatgtcggtgtgtcagtgtccgt 9482917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 73 - 160
Target Start/End: Complemental strand, 13770744 - 13770657
Alignment:
Q  73 cgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccg 160  Q
    |||||| | ||||||||| ||||||||| ||||||| |||||||||   ||||||  || ||||||||||||||||||||||| ||||    
T  13770744 cgacacttgtaattacactgaattatgtaatttttttaaattattagctgtgtcggcgtatcagtgtccgtgtcgtgtccgatgtccg 13770657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 69 - 148
Target Start/End: Original strand, 18013076 - 18013155
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgt 148  Q
    |||| ||||||||||||||||| ||||||||| ||||||| ||||||||| | |||||    ||||||||||||||||||    
T  18013076 acactgacacatataattacactgaattatgtaatttttttaaattattagtagtgtcagaatgtcagtgtccgtgtcgt 18013155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 21880259 - 21880160
Alignment:
Q  19 gacacttctcggattaggtgtgtcttcatgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||||||||||||||| ||||| |  ||||| ||  |||| |||||| |||||||||| | ||||||||| ||||||||| ||||| | |||||||||    
T  21880259 gacacttctcggattaggcgtgtcctggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtaattttctcaaattatta 21880160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 62 - 161
Target Start/End: Complemental strand, 25481966 - 25481867
Alignment:
Q  62 gtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccgt 161  Q
    |||||| ||||| |||| | ||||||||| ||||||||||||||||| |||||||||   ||||||  |||||| ||||| ||| ||||||||| |||||    
T  25481966 gtgtccgacaccaacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccatgttgtgtccgatgtccgt 25481867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 69 - 152
Target Start/End: Complemental strand, 49107877 - 49107795
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtcc 152  Q
    ||||||||||||||||| ||||  ||||||||| |||| | |||||||||  ||||||| |||||||| |||||||||||||||    
T  49107877 acaccgacacatataatcacactcaattatgtg-ttttctcaaattattagcggtgtcggtgtgtcagagtccgtgtcgtgtcc 49107795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 163
Target Start/End: Complemental strand, 5236043 - 5235949
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccgtat 163  Q
    ||||||| | ||||||||||||  |||||| | ||||| | |||||||||  |||||||| ||||||||||| ||||||||||| || |||||||    
T  5236043 acaccgatatatataattacactaaattatataattttcttaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgtccaatgtccgtat 5235949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 151
Target Start/End: Original strand, 18213028 - 18213118
Alignment:
Q  62 gtgtccaacaccgacacatataattacacagaattatgtgatttt-ttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtc 151  Q
    |||||| ||||||||||||||||||||||  |||||||||||||| | ||||  |||| | ||||||  || |||||||||||||||||||    
T  18213028 gtgtccgacaccgacacatataattacactaaattatgtgattttctaaaaaaaattagttgtgtcggcgtatcagtgtccgtgtcgtgtc 18213118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 150
Target Start/End: Original strand, 21140987 - 21141065
Alignment:
Q  72 ccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgt 150  Q
    ||||||| |||||| |||| ||||||| ||||||| | ||||||||| ||||||||| ||||| | |||||||||||||    
T  21140987 ccgacacctataatcacactgaattatatgattttcttaaattattagtggtgtcgacgtgtcggcgtccgtgtcgtgt 21141065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 147
Target Start/End: Complemental strand, 22484082 - 22484004
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcg 147  Q
    ||||||||||||||||||| || ||||||||  ||||| |||||||||||  |||||||  ||||||||||| ||||||    
T  22484082 acaccgacacatataattatactgaattatgcaattttctaaaattattagcggtgtcggcgtgtcagtgtctgtgtcg 22484004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 140
Target Start/End: Original strand, 42720881 - 42720963
Alignment:
Q  58 tgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtc 140  Q
    |||||||||  |||| ||||||||||||||||   |||||||||||||||| |||||||||  |||||| | |||||||||||    
T  42720881 tgttgtgtcagacactgacacatataattacatttaattatgtgattttttcaaattattagcggtgtcaacgtgtcagtgtc 42720963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 161
Target Start/End: Original strand, 11722123 - 11722192
Alignment:
Q  92 gaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccgt 161  Q
    ||||||||||||||| | ||||| |||  |||||||  |||||||||||||||||||||||| |||||||    
T  11722123 gaattatgtgattttctcaaattgttagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggtatccgt 11722192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 151
Target Start/End: Complemental strand, 21826337 - 21826248
Alignment:
Q  62 gtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtc 151  Q
    |||||| |||||||||||||| |||| || || |||||||||||||| ||||||||| | ||||||  |||| ||||||  |||||||||    
T  21826337 gtgtccgacaccgacacatattattagactgagttatgtgatttttttaaattattagtcgtgtcggcgtgttagtgtctatgtcgtgtc 21826248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 163
Target Start/End: Complemental strand, 24105746 - 24105642
Alignment:
Q  58 tgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgatat 157  Q
    ||||||| || || ||||||| | ||||||||| |||| |||  ||||||| |||||||||   ||||||  |||||||||||||||||||||||| |||    
T  24105746 tgttgtgcccgactccgacacttgtaattacactgaatcatgcaattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccg-tat 24105648  T
Q  158 ccgtat 163  Q
    ||||||    
T  24105647 ccgtat 24105642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 150
Target Start/End: Complemental strand, 3721157 - 3721070
Alignment:
Q  62 gtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgt 150  Q
    |||||| ||||||||||||||||||| ||  |||||||||||||| | |||||||||    ||||||  ||||||||||||||||||||    
T  3721157 gtgtccgacaccgacacatataattatactaaattatgtgattttctcaaattattagca-tgtcgaaatgtcagtgtccgtgtcgtgt 3721070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 32308177 - 32308105
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtcc 141  Q
    |||| |||||||| |||||||| ||||||||||||||| | |||||||||  |||||||  ||||||||||||    
T  32308177 acactgacacatacaattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtcc 32308105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 112
Target Start/End: Complemental strand, 640170 - 640127
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaa 112  Q
    |||||||||||||||||||||| |||||||||||||| ||||||    
T  640170 acaccgacacatataattacactgaattatgtgatttgttaaaa 640127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 140
Target Start/End: Complemental strand, 5835304 - 5835233
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtc 140  Q
    |||||||||||||||||||||| ||||||||| ||||| | ||| ||||| ||||||||  || ||||||||    
T  5835304 acaccgacacatataattacactgaattatgttattttctcaaactattagtggtgtcggcgtatcagtgtc 5835233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 140
Target Start/End: Original strand, 6630918 - 6630985
Alignment:
Q  73 cgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtc 140  Q
    |||||||||||||||||| |||||| |||| ||| | ||||||||| ||||||||  |||||||||||    
T  6630918 cgacacatataattacactgaattaagtgactttctcaaattattagtggtgtcggcgtgtcagtgtc 6630985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 118
Target Start/End: Complemental strand, 15680888 - 15680817
Alignment:
Q  47 tgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    ||||| || ||||| |||||| |||||||||| |||||||||||  ||||||||||||||||  ||||||||    
T  15680888 tgtcggacacgtgtcgtgtccgacaccgacacttataattacactaaattatgtgattttttttaattatta 15680817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 152
Target Start/End: Original strand, 43027471 - 43027554
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtcc 152  Q
    |||||||||| | || |||||| | ||||||||||||||| |||||||||   | ||||  |||||||||||||||||||||||    
T  43027471 acaccgacacttgtatttacactgcattatgtgattttttcaaattattagctgggtcgccgtgtcagtgtccgtgtcgtgtcc 43027554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 70 - 152
Target Start/End: Original strand, 2425736 - 2425818
Alignment:
Q  70 caccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtcc 152  Q
    |||||||||||||| || |||  |||||||||||||| | |||||||||| |||| ||  |||||||| || |||||||||||    
T  2425736 caccgacacatatagttccacttaattatgtgattttctcaaattattaacggtgccggcgtgtcagtatctgtgtcgtgtcc 2425818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 80 - 138
Target Start/End: Complemental strand, 3938189 - 3938131
Alignment:
Q  80 tataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtg 138  Q
    ||||||||||  ||||||||||||||||| |||||||| || || ||||||||||||||    
T  3938189 tataattacattgaattatgtgatttttttaaattatttatagtatcgatgtgtcagtg 3938131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 67 - 145
Target Start/End: Original strand, 21828405 - 21828483
Alignment:
Q  67 caacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgt 145  Q
    |||||| |||||||| |||||||  | ||||||||||||| | |||||| ||| |||||||  ||||||||||||||||    
T  21828405 caacactgacacatacaattacaatggattatgtgattttctcaaattactaacggtgtcggcgtgtcagtgtccgtgt 21828483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 112
Target Start/End: Complemental strand, 39138508 - 39138458
Alignment:
Q  62 gtgtccaacaccgacacatataattacacagaattatgtgattttttaaaa 112  Q
    |||||| ||||||||| |||||||||||| ||||||||||||||| |||||    
T  39138508 gtgtccgacaccgacatatataattacactgaattatgtgattttctaaaa 39138458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 140
Target Start/End: Complemental strand, 5233688 - 5233615
Alignment:
Q  67 caacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtc 140  Q
    ||||||| ||||||||||||||||   ||||||||||||| | ||||||||||  || ||| ||||||||||||    
T  5233688 caacaccaacacatataattacactagattatgtgattttctcaaattattaaccgtatcggtgtgtcagtgtc 5233615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 162
Target Start/End: Complemental strand, 7438763 - 7438670
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccgta 162  Q
    |||||||||| | ||||||||  ||||||||||||||||| ||||||||||  ||||||   |||||||||   |||||| |||||| ||||||    
T  7438763 acaccgacacttgtaattacattgaattatgtgattttttcaaattattaactgtgtcggcatgtcagtgtttatgtcgtatccgatgtccgta 7438670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 118
Target Start/End: Complemental strand, 24146873 - 24146824
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    ||||||||||||||||||| |  ||||||||||||||| |||||||||||    
T  24146873 acaccgacacatataattatattgaattatgtgattttctaaaattatta 24146824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 128
Target Start/End: Original strand, 32287415 - 32287524
Alignment:
Q  19 gacacttctcggattaggtgtgtcttcatgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||| |||||||||||||||||    ||||| || | |||  ||||| ||||||||||||||| || ||| ||||||||||||||| | | |||||||    
T  32287415 gacactcctcggattaggtgtgtcccggtgtcggacacttgtcatgtccgacaccgacacatatacttgcactgaattatgtgattttctcagattatta 32287514  T
Q  119 atggtgtcga 128  Q
      ||||||||    
T  32287515 gcggtgtcga 32287524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 19213867 - 19213811
Alignment:
Q  62 gtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||| |||||||||| | || |||||| | |||||||||||||||||||||||||    
T  19213867 gtgtccgacaccgacacttgtatttacactgcattatgtgattttttaaaattatta 19213811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 119
Target Start/End: Original strand, 27732243 - 27732291
Alignment:
Q  71 accgacacatataattacacagaattatgtgattttttaaaattattaa 119  Q
    |||||||||||||||||||| ||||||||| ||||| | ||||||||||    
T  27732243 accgacacatataattacactgaattatgtaattttcttaaattattaa 27732291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 153
Target Start/End: Complemental strand, 43250046 - 43249966
Alignment:
Q  73 cgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    |||||| ||||||||||| | ||||||| ||||| | |||||||||   ||||||  ||||||||||||||||| ||||||    
T  43250046 cgacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcttgtccg 43249966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 137
Target Start/End: Complemental strand, 2948739 - 2948672
Alignment:
Q  70 caccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagt 137  Q
    |||||||||||||||||||||  ||||| |||||||| ||||||||| |  |||||||  ||||||||    
T  2948739 caccgacacatataattacactaaattacgtgattttctaaaattatcagcggtgtcggcgtgtcagt 2948672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 3991381 - 3991318
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtg 132  Q
    |||||||||| | |||||| || ||||||||||||||||| ||||||||| | |||||| ||||    
T  3991381 acaccgacacttgtaattatactgaattatgtgattttttcaaattattagttgtgtcggtgtg 3991318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 148
Target Start/End: Complemental strand, 10042994 - 10042915
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgt 148  Q
    |||| ||||| ||||||||| |  |||||||||| ||| | ||||||||| ||||||||  |||| ||||||||||||||    
T  10042994 acactgacacttataattacgctaaattatgtgaatttatcaaattattagtggtgtcggcgtgtaagtgtccgtgtcgt 10042915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 155
Target Start/End: Complemental strand, 21864887 - 21864777
Alignment:
Q  47 tgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgatttttta--aaattattaatggtgtcgatgtgtcagtgtccgtg 144  Q
    ||||| || ||||| |||||| ||| |||||| | |||||||||  |||||| |||||||||   |||||||||   |||||  |||||| |||||||||    
T  21864887 tgtcggacacgtgtcgtgtccgacagcgacacttgtaattacactaaattatatgattttttttcaaattattagctgtgtccgtgtgtccgtgtccgtg 21864788  T
Q  145 tcgtgtccgat 155  Q
    |||||||||||    
T  21864787 tcgtgtccgat 21864777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 126
Target Start/End: Original strand, 23128661 - 23128720
Alignment:
Q  67 caacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtc 126  Q
    |||||||||||||||| ||||||| ||||||| || |||| | ||||||||| |||||||    
T  23128661 caacaccgacacatatgattacactgaattatatggttttctcaaattattattggtgtc 23128720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 118
Target Start/End: Original strand, 26033465 - 26033512
Alignment:
Q  71 accgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||||| | ||||||||| ||||||||||||||||| |||||||||    
T  26033465 accgacacttgtaattacactgaattatgtgattttttcaaattatta 26033512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 151
Target Start/End: Complemental strand, 2034498 - 2034416
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtc 151  Q
    |||| ||||||||||  |||||  |||||| |||| || | ||||||||| ||||||||| |||| ||| |||||||||||||    
T  2034498 acactgacacatatatatacactaaattatatgatattctcaaattattagtggtgtcgacgtgtaagtatccgtgtcgtgtc 2034416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 163
Target Start/End: Original strand, 7328693 - 7328787
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccgtat 163  Q
    ||||||||||||||||||||||  |||||||| ||||| | |||||||||   || |||| |||| | |||| ||||||||| || | |||||||    
T  7328693 acaccgacacatataattacactaaattatgttattttctcaaattattagcagtatcgacgtgttaatgtctgtgtcgtgttcggtgtccgtat 7328787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 153
Target Start/End: Original strand, 36297349 - 36297430
Alignment:
Q  71 accgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    ||||||||||||  || ||  ||||||||||||||| | |||||||||   ||||||| |||||| |||||||||||||||||    
T  36297349 accgacacatatcgttccaatgaattatgtgattttcttaaattattagccgtgtcga-gtgtcaatgtccgtgtcgtgtccg 36297430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 119
Target Start/End: Complemental strand, 38143280 - 38143230
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaa 119  Q
    ||||| |||||||||||||||   |||||||||||||||| ||||||||||    
T  38143280 acaccaacacatataattacattaaattatgtgattttttcaaattattaa 38143230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 155
Target Start/End: Original strand, 1334905 - 1334986
Alignment:
Q  75 acacatataattacacagaattatgtgatttttta-aaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgat 155  Q
    |||||||||| ||||  ||||||||| |||||||  ||||||||| |||||| || ||||  ||||||||||| ||||||||    
T  1334905 acacatataaatacattgaattatgtcatttttttcaaattattattggtgtggaggtgtatgtgtccgtgtcatgtccgat 1334986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 118
Target Start/End: Original strand, 5409838 - 5409887
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||||||| | ||||| ||| ||||||||||||||||| |||||||||    
T  5409838 acaccgacacttgtaattgcactgaattatgtgattttttcaaattatta 5409887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 118
Target Start/End: Original strand, 7197287 - 7197348
Alignment:
Q  57 gtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    ||||||||||| |||||||||| | ||||||||  ||||||  ||||||||| |||||||||    
T  7197287 gtgttgtgtccgacaccgacacttgtaattacattgaattaaatgatttttttaaattatta 7197348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 7758379 - 7758322
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtc 126  Q
    ||||||||||| ||||||| || ||||||| | ||||| ||||||||||| |||||||    
T  7758379 acaccgacacacataattatactgaattatataattttctaaaattattagtggtgtc 7758322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 118
Target Start/End: Original strand, 11665446 - 11665491
Alignment:
Q  73 cgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||| |||||||| || ||||||||||||||||| |||||||||    
T  11665446 cgacacttataattagactgaattatgtgattttttcaaattatta 11665491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 118
Target Start/End: Complemental strand, 12278888 - 12278843
Alignment:
Q  73 cgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||||||||||||||| ||||||||| ||||| | |||||||||    
T  12278888 cgacacatataattacactgaattatgtcattttcttaaattatta 12278843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 118
Target Start/End: Complemental strand, 16341553 - 16341504
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||| |||||||||||||||  |||||||||||||| | |||||||||    
T  16341553 acaccggcacatataattacacttaattatgtgattttctcaaattatta 16341504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 118
Target Start/End: Complemental strand, 19992058 - 19992009
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||||||| ||||||||||| ||| ||||||||||| | |||||||||    
T  19992058 acaccgacacttataattacactgaaatatgtgattttctcaaattatta 19992009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 118
Target Start/End: Original strand, 23849460 - 23849509
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    ||||||||||||||||||| || |||||||||| |||| | |||||||||    
T  23849460 acaccgacacatataattatactgaattatgtgtttttcttaaattatta 23849509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 146
Target Start/End: Complemental strand, 37742580 - 37742503
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtc 146  Q
    |||||||||||||| ||||||  |||| |||  ||||| | ||||||||| ||||||||  ||| |||||||||||||    
T  37742580 acaccgacacatattattacattgaatcatgaaattttgttaaattattagtggtgtcggcgtggcagtgtccgtgtc 37742503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 106
Target Start/End: Complemental strand, 38630016 - 38629971
Alignment:
Q  61 tgtgtccaacaccgacacatataattacacagaattatgtgatttt 106  Q
    |||||| |||||| |||||||| ||||||||||||||||| |||||    
T  38630016 tgtgtctaacacctacacatattattacacagaattatgtcatttt 38629971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 161
Target Start/End: Complemental strand, 1656681 - 1656649
Alignment:
Q  129 tgtgtcagtgtccgtgtcgtgtccgatatccgt 161  Q
    |||||| ||||||||||||||||||||||||||    
T  1656681 tgtgtcggtgtccgtgtcgtgtccgatatccgt 1656649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 6028658 - 6028590
Alignment:
Q  93 aattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccgt 161  Q
    |||||||| || |||| ||||||||||   | |||||||||||||||| |||||||||| ||| |||||    
T  6028658 aattatgttatattttcaaattattaaccatatcgatgtgtcagtgtctgtgtcgtgtctgatgtccgt 6028590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 121
Target Start/End: Original strand, 8239056 - 8239104
Alignment:
Q  73 cgacacatataattacacagaattatgtgattttttaaaattattaatg 121  Q
    |||||||||||||||||| |||||||  |||||| | ||||||||||||    
T  8239056 cgacacatataattacactgaattataagattttcttaaattattaatg 8239104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 134
Target Start/End: Complemental strand, 11831476 - 11831424
Alignment:
Q  82 taattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtc 134  Q
    |||||||||  |||||| ||||||||| ||||||||| | |||||||||||||    
T  11831476 taattacactaaattatatgattttttcaaattattagttgtgtcgatgtgtc 11831424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 14077429 - 14077517
Alignment:
Q  62 gtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgt 150  Q
    ||||| ||| ||||||| |||||||| |   |||||||| ||||||| |||| ||||  ||| |||| |||| ||||||||||||||||    
T  14077429 gtgtctaactccgacacttataattatattaaattatgttattttttcaaataattaggggtatcgacgtgtaagtgtccgtgtcgtgt 14077517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 14387457 - 14387545
Alignment:
Q  62 gtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgt 150  Q
    ||||| ||| ||||||| |||||||| |   |||||||| ||||||| |||| ||||  ||| |||| |||| ||||||||||||||||    
T  14387457 gtgtctaactccgacacttataattatattaaattatgttattttttcaaataattaggggtatcgacgtgtaagtgtccgtgtcgtgt 14387545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 99
Target Start/End: Complemental strand, 29769516 - 29769480
Alignment:
Q  63 tgtccaacaccgacacatataattacacagaattatg 99  Q
    |||| |||||||||||||||||||| |||||||||||    
T  29769516 tgtctaacaccgacacatataattatacagaattatg 29769480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 145
Target Start/End: Original strand, 29787383 - 29787447
Alignment:
Q  81 ataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgt 145  Q
    |||||||||| ||||||||||||||| | |||||||||  |||||||  |||| | |||||||||    
T  29787383 ataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgttaatgtccgtgt 29787447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 1e-22; HSPs: 68)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 153
Target Start/End: Original strand, 21191008 - 21191142
Alignment:
Q  19 gacacttctcggattaggtgtgtcttcatgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||| ||||||||||| |||||     |||| || |||||||||||| |||||||||| | ||||||||| ||||||||||||||||| |||||||||    
T  21191008 gacactcctcggattaggcgtgtcccggagtcggacacgtgttgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 21191107  T
Q  119 atggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
       ||||||   |||||||||||||||||||||||    
T  21191108 gctgtgtcggcatgtcagtgtccgtgtcgtgtccg 21191142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 74 - 146
Target Start/End: Original strand, 7175026 - 7175098
Alignment:
Q  74 gacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtc 146  Q
    ||||||||||||||  |  |||||||||||||| | |||||||||| ||||||||||||||||||||||||||    
T  7175026 gacacatataattatgccaaattatgtgattttctcaaattattaacggtgtcgatgtgtcagtgtccgtgtc 7175098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 69 - 153
Target Start/End: Original strand, 13287401 - 13287485
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    |||||||||| | || |||||| ||||||||||||||||| |||||||||   ||||||| |||| |||||||||||||||||||    
T  13287401 acaccgacacttgtagttacactgaattatgtgattttttcaaattattatctgtgtcgacgtgttagtgtccgtgtcgtgtccg 13287485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 69 - 153
Target Start/End: Complemental strand, 21522807 - 21522723
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    |||||||||  | ||||||||| ||||||||| |||||||||||||||||   ||||||  ||||||||||||||||||||||||    
T  21522807 acaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccg 21522723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 69 - 153
Target Start/End: Complemental strand, 21533373 - 21533289
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    |||||||||  | ||||||||| ||||||||| |||||||||||||||||   ||||||  ||||||||||||||||||||||||    
T  21533373 acaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccg 21533289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 62 - 153
Target Start/End: Complemental strand, 6247686 - 6247595
Alignment:
Q  62 gtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    |||||| |||||||||| | ||||||||| ||||||||||||||||| |||||||||   ||||||  |||||||||| ||| |||||||||    
T  6247686 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagatgtgtcggcgtgtcagtgtgcgtatcgtgtccg 6247595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 40000555 - 40000631
Alignment:
Q  87 acacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccgtat 163  Q
    |||| ||||||||||||||||| ||||||||||  |||||||  ||||||||||||||||||  || ||||||||||    
T  40000555 acactgaattatgtgattttttcaaattattaagagtgtcgacatgtcagtgtccgtgtcgtacccaatatccgtat 40000631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 127
Target Start/End: Original strand, 28588664 - 28588734
Alignment:
Q  57 gtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcg 127  Q
    |||| |||||| |||||||||| ||||||||||| ||||||||||||||| | |||||||||  |||||||    
T  28588664 gtgtcgtgtccgacaccgacacctataattacactgaattatgtgattttctcaaattattaccggtgtcg 28588734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 141
Target Start/End: Complemental strand, 42893439 - 42893345
Alignment:
Q  47 tgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtcc 141  Q
    ||||| || |||||||||||  |||||||||| | ||||||||| | ||||||||||||||| |||||||||   |||||| |||||| ||||||    
T  42893439 tgtcggacacgtgttgtgtctgacaccgacacttgtaattacactggattatgtgattttttcaaattattagctgtgtcggtgtgtccgtgtcc 42893345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 150
Target Start/End: Original strand, 19552569 - 19552626
Alignment:
Q  93 aattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgt 150  Q
    |||||||||||||||| ||||||||||  ||||||  |||||||||||||||||||||    
T  19552569 aattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgt 19552626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 57 - 118
Target Start/End: Original strand, 30502378 - 30502439
Alignment:
Q  57 gtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||| |||||| |||||||||||||||||||||| |||||| |||||||| | |||||||||    
T  30502378 gtgtcgtgtccgacaccgacacatataattacactgaattaagtgattttctcaaattatta 30502439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 57 - 118
Target Start/End: Original strand, 30542721 - 30542782
Alignment:
Q  57 gtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||| |||||| |||||||||||||||||||||| |||||| |||||||| | |||||||||    
T  30542721 gtgtcgtgtccgacaccgacacatataattacactgaattaagtgattttctcaaattatta 30542782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 32630681 - 32630786
Alignment:
Q  13 agcagagacacttctcggattaggtgtgtcttcatgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaa 112  Q
    |||| ||||||| |||| |||||||||||||  |||||| || ||||| || ||| |||| ||||||||||||||||  ||||||| | ||||| | |||    
T  32630681 agcatagacactcctcgaattaggtgtgtctcaatgtcggacacgtgtcgtatccgacactgacacatataattacattgaattatataattttctcaaa 32630780  T
Q  113 ttatta 118  Q
    ||||||    
T  32630781 ttatta 32630786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 141
Target Start/End: Original strand, 33035810 - 33035875
Alignment:
Q  76 cacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtcc 141  Q
    ||||||||||||||| ||||||| |||||| || |||||||||||||| ||| ||| |||||||||    
T  33035810 cacatataattacactgaattatatgatttattcaaattattaatggtatcggtgtatcagtgtcc 33035875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 37328846 - 37328927
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgt 150  Q
    |||||||||||| ||||||||| ||||| ||||||||||  ||||||||    |||||| ||| ||||||||||||||||||    
T  37328846 acaccgacacatgtaattacactgaattttgtgatttttacaaattatttgctgtgtcggtgtatcagtgtccgtgtcgtgt 37328927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 3966560 - 3966488
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtcc 141  Q
    |||||||||||||||||||||| ||||| ||||||||| | |||||||||  |||||||   |||||||||||    
T  3966560 acaccgacacatataattacactgaattgtgtgattttctcaaattattagcggtgtcggcatgtcagtgtcc 3966488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 153
Target Start/End: Complemental strand, 14422966 - 14422877
Alignment:
Q  62 gtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    |||||| ||| ||| || ||||||||||| ||||||||||||||||  |||||||||   || ||| ||||||||||||| |||||||||||    
T  14422966 gtgtccgacatcgaaacttataattacactgaattatgtgattttt--aaattattagctgtatcggtgtgtcagtgtccttgtcgtgtccg 14422877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 67 - 151
Target Start/End: Original strand, 15410448 - 15410532
Alignment:
Q  67 caacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtc 151  Q
    ||||||| |||||||| ||||||| |||| || | ||||| | |||||||||  |||||||  ||||||||||||||||||||||    
T  15410448 caacaccaacacatatgattacactgaatcatataattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtc 15410532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 21351907 - 21351979
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtcc 141  Q
    |||||||||| | ||||||||| ||||||||||| |||||  |||||||| | |||||| |||||||||||||    
T  21351907 acaccgacacttgtaattacactgaattatgtgactttttccaattattagttgtgtcggtgtgtcagtgtcc 21351979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 112
Target Start/End: Original strand, 30099027 - 30099083
Alignment:
Q  56 cgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaa 112  Q
    ||||| || ||| ||||||||||||||||||||||||||||||| |||| |||||||    
T  30099027 cgtgtcgtatccgacaccgacacatataattacacagaattatgcgattgtttaaaa 30099083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 33178090 - 33178014
Alignment:
Q  61 tgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagt 137  Q
    ||||||| |||||||||| | |||||||||  |||||||||||||||| ||||||||| | ||||||  ||||||||    
T  33178090 tgtgtccgacaccgacacttgtaattacactaaattatgtgatttttttaaattattagttgtgtcggcgtgtcagt 33178014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 153
Target Start/End: Original strand, 36642764 - 36642848
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    |||||||||| |||| ||||||  || ||||| | ||||| ||||||||||  ||||||  ||||||||||||||||||||||||    
T  36642764 acaccgacacttatatttacactaaaatatgtcactttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtccg 36642848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 140
Target Start/End: Complemental strand, 2436979 - 2436908
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtc 140  Q
    ||||||||||||||||| |||  ||||||||||||||||  |||||||||  |||||||  |||||||||||    
T  2436979 acaccgacacatataatcacaacgaattatgtgatttttgcaaattattagcggtgtcggcgtgtcagtgtc 2436908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 161
Target Start/End: Original strand, 6326312 - 6326391
Alignment:
Q  82 taattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccgt 161  Q
    ||||||||| ||||||||| ||||| | |||||| ||  | |||||  |||||||||||||||||||||||| |||||||    
T  6326312 taattacactgaattatgtaattttctcaaattactagcgatgtcggcgtgtcagtgtccgtgtcgtgtccggtatccgt 6326391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 163
Target Start/End: Complemental strand, 6770610 - 6770506
Alignment:
Q  57 gtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgata 156  Q
    |||| |||||| |||| ||||||||  | ||||| ||||||||||||||| | ||||||||| | |||||  |||||||||||||||||| ||| || |     
T  6770610 gtgtcgtgtccgacactgacacata--agtacactgaattatgtgattttcttaaattattagttgtgtcagtgtgtcagtgtccgtgtcatgttcggtg 6770513  T
Q  157 tccgtat 163  Q
    |||||||    
T  6770512 tccgtat 6770506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 21576697 - 21576796
Alignment:
Q  19 gacacttctcggattaggtgtgtcttcatgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||| ||||||||||| |||||    ||||  || ||||| |||||| ||| |||||| | ||||||||| ||||||||||||||||| |||||||||    
T  21576697 gacactcctcggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacatcgacacttgtaattacactgaattatgtgattttttcaaattatta 21576796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 163
Target Start/End: Complemental strand, 22013460 - 22013377
Alignment:
Q  80 tataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccgtat 163  Q
    |||||||||||  |||||||| ||||||  |||||||||   ||||||  |||||||||||||||||||||||| | |||||||    
T  22013460 tataattacactaaattatgtaatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtat 22013377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 146
Target Start/End: Complemental strand, 14674323 - 14674249
Alignment:
Q  72 ccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtc 146  Q
    ||||||| | |||||||||  |||||||||||||||| |||||||||   ||||||  |||||||||||||||||    
T  14674323 ccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 14674249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 163
Target Start/End: Original strand, 19820391 - 19820490
Alignment:
Q  62 gtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccgt 161  Q
    |||||| |||||||||| |||||||  ||  |||||||  ||||| | |||||||||  |||||||  |||||||||||||||||||||||| | |||||    
T  19820391 gtgtccgacaccgacacttataattgtacttaattatg--attttctcaaattattagcggtgtcggagtgtcagtgtccgtgtcgtgtccggtgtccgt 19820488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 155
Target Start/End: Original strand, 22423814 - 22423900
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgat 155  Q
    ||||||||| ||||||||| |  ||||||||||||||| | ||||||||| | |||||   |||||||| |||||||||||| ||||    
T  22423814 acaccgacatatataattatattgaattatgtgattttctcaaattattagtagtgtcagggtgtcagtatccgtgtcgtgttcgat 22423900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 71 - 153
Target Start/End: Original strand, 24906305 - 24906387
Alignment:
Q  71 accgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    |||||||| | ||||||||| ||||||||| ||||||| |||||||||   |||| |  |||||||||| |||||||||||||    
T  24906305 accgacacttgtaattacactgaattatgtcattttttcaaattattatctgtgttggcgtgtcagtgttcgtgtcgtgtccg 24906387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 127
Target Start/End: Complemental strand, 42029821 - 42029751
Alignment:
Q  57 gtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcg 127  Q
    |||| |||||| ||||||| |||||||||||||  ||||||||||||||| |||| || ||||| ||||||    
T  42029821 gtgtcgtgtccgacaccgatacatataattacattgaattatgtgattttctaaattttttaattgtgtcg 42029751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 118
Target Start/End: Original strand, 6471891 - 6471940
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    ||||| |||||||||||||||| ||||||||||||||| | |||||||||    
T  6471891 acacccacacatataattacactgaattatgtgattttctcaaattatta 6471940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 147
Target Start/End: Complemental strand, 9449521 - 9449448
Alignment:
Q  74 gacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcg 147  Q
    |||||| ||| |||||  ||||||||||||||| | ||||||||| ||||||||  ||| ||||||||||||||    
T  9449521 gacacaaatagttacattgaattatgtgattttctcaaattattattggtgtcggcgtgccagtgtccgtgtcg 9449448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 57 - 118
Target Start/End: Original strand, 23012398 - 23012459
Alignment:
Q  57 gtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||| ||||||||||||||||||||||||||||   |||||| ||||||| | |||||||||    
T  23012398 gtgtcgtgtccaacaccgacacatataattacattaaattatatgattttctcaaattatta 23012459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 128
Target Start/End: Complemental strand, 23221046 - 23220981
Alignment:
Q  63 tgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcga 128  Q
    |||||||||||||||||||| || ||||  |||||||||||||| | |||||||||  ||||||||    
T  23221046 tgtccaacaccgacacatatgataacactaaattatgtgattttatcaaattattagcggtgtcga 23220981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 117
Target Start/End: Complemental strand, 26312875 - 26312778
Alignment:
Q  20 acacttctcggattaggtgtgtcttcatgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattatt 117  Q
    ||||| ||||||||||||||||| |  ||||  || ||| | |||||| ||||||| |||||||||||||| ||||||  ||||||| | ||||||||    
T  26312875 acactcctcggattaggtgtgtcctggtgtcagacacgtatcgtgtccgacaccgatacatataattacactgaattaattgattttctcaaattatt 26312778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 128
Target Start/End: Original strand, 38749563 - 38749624
Alignment:
Q  67 caacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcga 128  Q
    ||||||| |||||||||||||||  ||||||||| ||||||| |||||||||  ||||||||    
T  38749563 caacaccaacacatataattacattgaattatgtcattttttcaaattattatcggtgtcga 38749624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 112
Target Start/End: Complemental strand, 39758327 - 39758286
Alignment:
Q  71 accgacacatataattacacagaattatgtgattttttaaaa 112  Q
    |||||||||||||||||||| ||||||||||||||| |||||    
T  39758327 accgacacatataattacactgaattatgtgattttctaaaa 39758286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 153
Target Start/End: Original strand, 41558708 - 41558769
Alignment:
Q  92 gaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    ||||||||| ||||| | ||||||||| | ||||| ||||||||||||||||||||| ||||    
T  41558708 gaattatgtcattttctcaaattattatttgtgtcaatgtgtcagtgtccgtgtcgtatccg 41558769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 116
Target Start/End: Complemental strand, 43564988 - 43564891
Alignment:
Q  19 gacacttctcggattaggtgtgtcttcatgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattat 116  Q
    |||||||||||||||||| |||||     |||| || | ||| |||||| |||||||||| |||||||||||  |||||||||||||||  |||||||    
T  43564988 gacacttctcggattaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccgacacttataattacactaaattatgtgatttttccaaattat 43564891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 153
Target Start/End: Complemental strand, 6401555 - 6401471
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    |||||||||||||||||||||| | ||| ||||||||| |||||   ||| | ||||||  ||||| |||||||||||| |||||    
T  6401555 acaccgacacatataattacactgtattttgtgattttctaaaaaatttagttgtgtcggcgtgtcggtgtccgtgtcgcgtccg 6401471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 146
Target Start/End: Original strand, 19168828 - 19168900
Alignment:
Q  74 gacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtc 146  Q
    ||||||||| ||||||| |||| |||||||||| | |||||| ||  ||||| | ||||||||||||||||||    
T  19168828 gacacatatgattacactgaataatgtgattttatcaaattaatagcggtgtaggtgtgtcagtgtccgtgtc 19168900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 153
Target Start/End: Original strand, 23015989 - 23016077
Alignment:
Q  67 caacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtc-ga-tgtgtcagtgtccgtgtcgtgtccg 153  Q
    ||||| |||||| ||||||||||| ||||||||||||||| | |||| ||||| | |||| ||  ||||| ||||||||||||||||||    
T  23015989 caacatcgacacctataattacactgaattatgtgattttctcaaatgattaacgatgtcagagagtgtcggtgtccgtgtcgtgtccg 23016077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 146
Target Start/End: Complemental strand, 27144515 - 27144443
Alignment:
Q  74 gacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtc 146  Q
    |||||||||||||||||  |||||||||||||  | |||||||||  |||||||  ||||||||||| |||||    
T  27144515 gacacatataattacactaaattatgtgatttcctcaaattattagcggtgtcggcgtgtcagtgtctgtgtc 27144443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 146
Target Start/End: Complemental strand, 43001844 - 43001780
Alignment:
Q  82 taattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtc 146  Q
    ||||||||| ||||||||| ||||||| |||||||||   |||||||  ||||||||||||||||    
T  43001844 taattacactgaattatgtaattttttcaaattattagcagtgtcgacatgtcagtgtccgtgtc 43001780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 140
Target Start/End: Original strand, 5467984 - 5468051
Alignment:
Q  73 cgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtc 140  Q
    |||||| ||||||||||| ||||||||||||||| | |||||||||  ||| | || |||||||||||    
T  5467984 cgacacctataattacactgaattatgtgattttatcaaattattatcggtattgacgtgtcagtgtc 5468051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 108
Target Start/End: Complemental strand, 15884057 - 15884006
Alignment:
Q  57 gtgttgtgtccaacaccgacacatataattacacagaattatgtgatttttt 108  Q
    |||| |||||| |||||||||| | ||||||||| |||||||||||||||||    
T  15884057 gtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgatttttt 15884006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 118
Target Start/End: Original strand, 16203791 - 16203846
Alignment:
Q  63 tgtccaacaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    ||||| ||||||||||||||||||||||  ||||||| |||||| | |||||||||    
T  16203791 tgtccgacaccgacacatataattacactaaattatgagattttctcaaattatta 16203846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 140
Target Start/End: Original strand, 16374344 - 16374415
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtc 140  Q
    |||||||||||| ||||||||| || |||||| |||||||  ||||||||| | |||||| |||| ||||||    
T  16374344 acaccgacacatgtaattacactgatttatgttatttttttcaattattaacgatgtcgacgtgttagtgtc 16374415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 161
Target Start/End: Complemental strand, 17123112 - 17123013
Alignment:
Q  62 gtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccgt 161  Q
    |||||||||||||||| ||||||||  ||   ||||||||||||| | |||||||||  ||||| |  |||||||||||| |||  |||||||| |||||    
T  17123112 gtgtccaacaccgacatatataattgtacttgattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccatgttatgtccgatgtccgt 17123013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 116
Target Start/End: Original strand, 18421831 - 18421890
Alignment:
Q  57 gtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattat 116  Q
    |||| |||||| || ||||||||||||||||||| | ||||||||||||| | |||||||    
T  18421831 gtgtcgtgtccgacgccgacacatataattacactggattatgtgattttctcaaattat 18421890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 152
Target Start/End: Original strand, 25888306 - 25888380
Alignment:
Q  80 tataattacacagaattatgtgatttt--ttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtcc 152  Q
    ||||||||||| ||||||| |||||||  |||||||||||| | |||| | |||||| || ||||||||||||||    
T  25888306 tataattacactgaattatatgattttttttaaaattattagtagtgttggtgtgtctgtatccgtgtcgtgtcc 25888380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 142
Target Start/End: Complemental strand, 30098381 - 30098310
Alignment:
Q  71 accgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccg 142  Q
    |||||||  ||||||||||  ||||||||||||||| | |||||||||| ||| |||  |||||||||||||    
T  30098381 accgacatctataattacattgaattatgtgattttctcaaattattaacggtttcgtcgtgtcagtgtccg 30098310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 161
Target Start/End: Complemental strand, 4105303 - 4105222
Alignment:
Q  82 taattacacagaattatgtga--ttttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccgt 161  Q
    ||||||||| |||||||||||  |||||| ||||||||| |  |||||  |||||||| |||||||| |||||| |||||||    
T  4105303 taattacactgaattatgtgatcttttttcaaattattagttatgtcggcgtgtcagtatccgtgtcatgtccggtatccgt 4105222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 17177012 - 17177074
Alignment:
Q  56 cgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    ||||||||||| ||||||||||| | ||||||||  ||||| | ||||||||| |||||||||    
T  17177012 cgtgttgtgtctaacaccgacacttgtaattacaatgaattttttgattttttcaaattatta 17177074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 143
Target Start/End: Complemental strand, 39698598 - 39698524
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgt 143  Q
    |||| ||||| | ||||||||| ||||||||||||||||| |||||||||   |||||   ||||||||||||||    
T  39698598 acactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtgtccgt 39698524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 148
Target Start/End: Complemental strand, 41995515 - 41995449
Alignment:
Q  82 taattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgt 148  Q
    ||||||||  |||||||||||||||||  |||||||| | ||||||  ||||||||||| |||||||    
T  41995515 taattacattgaattatgtgattttttcgaattattagttgtgtcggcgtgtcagtgtctgtgtcgt 41995449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 118
Target Start/End: Complemental strand, 7677762 - 7677713
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||||||| | ||||| ||| ||||||||||||||||| |||||||||    
T  7677762 acaccgacacttctaattgcactgaattatgtgattttttcaaattatta 7677713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 118
Target Start/End: Original strand, 17925174 - 17925223
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||||||||||| ||||||  ||||||||||||||| | |||||||||    
T  17925174 acaccgacacatattattacattgaattatgtgattttcttaaattatta 17925223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 19438386 - 19438329
Alignment:
Q  83 aattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtc 140  Q
    |||||||| ||||||||||||||| | ||||||| |  | ||||||||||||||||||    
T  19438386 aattacactgaattatgtgattttctcaaattatcagcgatgtcgatgtgtcagtgtc 19438329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 145
Target Start/End: Complemental strand, 31264491 - 31264421
Alignment:
Q  73 cgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgt 145  Q
    |||||| ||| ||||||| ||||||||| ||||| | ||||||||| | ||||||||||||  ||||||||||    
T  31264491 cgacacttatgattacactgaattatgtcattttctcaaattattacttgtgtcgatgtgt--gtgtccgtgt 31264421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 118
Target Start/End: Complemental strand, 36838600 - 36838551
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    ||||||||||||||||||||||  |||||||| ||||| | |||||||||    
T  36838600 acaccgacacatataattacactaaattatgtaattttctcaaattatta 36838551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 106
Target Start/End: Original strand, 41091263 - 41091296
Alignment:
Q  73 cgacacatataattacacagaattatgtgatttt 106  Q
    |||||||||||||||||| |||||||||||||||    
T  41091263 cgacacatataattacactgaattatgtgatttt 41091296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 42488063 - 42488136
Alignment:
Q  77 acatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgt 150  Q
    |||| ||||||||  ||||||| | ||||| | ||||||| || |||||||| ||||||||||| |||||||||    
T  42488063 acatgtaattacattgaattatataattttattaaattatcaacggtgtcgacgtgtcagtgtctgtgtcgtgt 42488136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 159
Target Start/End: Original strand, 3751938 - 3752021
Alignment:
Q  75 acacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatcc 159  Q
    ||||||||||||| ||  | |||||||||||| | ||||||||| | |||||||  ||| ||||| ||||||||||||| |||||    
T  3751938 acacatataattatacttagttatgtgattttctcaaattattagt-gtgtcgacttgttagtgttcgtgtcgtgtccggtatcc 3752021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 176
Target Start/End: Complemental strand, 30135371 - 30135264
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgatt-ttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccgtatattt 167  Q
    |||||||||| | ||||||||  || |||||||||| |||| ||||||||| | ||||||  ||||| || || |||||||||||| | ||||||||| |    
T  30135371 acaccgacacttgtaattacaatgagttatgtgatttttttcaaattattagttgtgtcggcgtgtcggtatctgtgtcgtgtccg-tgtccgtatatgt 30135273  T
Q  168 gctacatag 176  Q
    ||| |||||    
T  30135272 gcttcatag 30135264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 145
Target Start/End: Complemental strand, 32444823 - 32444747
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgt 145  Q
    |||||||||||| | ||||||  ||||||||| || || | ||||| |||||||||| || ||||||||||| ||||    
T  32444823 acaccgacacatttgattacattgaattatgtcatcttctcaaattgttaatggtgttgacgtgtcagtgtctgtgt 32444747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 2e-21; HSPs: 92)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 67 - 163
Target Start/End: Original strand, 10572589 - 10572685
Alignment:
Q  67 caacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccgtat 163  Q
    |||||||||||||| ||||||||| ||||||||||||||| | ||||||||| ||||||||  |||||||||| | ||||||||||| | |||||||    
T  10572589 caacaccgacacatttaattacaccgaattatgtgattttctcaaattattagtggtgtcggcgtgtcagtgttcatgtcgtgtccggtgtccgtat 10572685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 69 - 153
Target Start/End: Original strand, 20157352 - 20157436
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    |||||||||||||| ||||||| ||||||||||||||| | | |||||||  |||||||||||||||||| ||||||||||||||    
T  20157352 acaccgacacatatgattacactgaattatgtgattttctcacattattagcggtgtcgatgtgtcagtgcccgtgtcgtgtccg 20157436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 74 - 153
Target Start/End: Original strand, 398772 - 398851
Alignment:
Q  74 gacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    ||||| ||||||||||| ||||||||||||||||| |||||||||  |||||||  ||||||||||||||||||||||||    
T  398772 gacacctataattacactgaattatgtgattttttcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccg 398851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 65 - 140
Target Start/End: Complemental strand, 13997944 - 13997869
Alignment:
Q  65 tccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtc 140  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||| ||||| |||||||  |||||||||||    
T  13997944 tccaacaccgacacatataattacactgaattatgtgatttttttaaataattaacggtgtcggcgtgtcagtgtc 13997869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 46 - 163
Target Start/End: Original strand, 39130746 - 39130863
Alignment:
Q  46 atgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgt 145  Q
    ||||||| | |||||||||||| ||||||||||||||||||||||  |||||| | ||||| ||||||||||||| |||||   |||||| | ||| |||    
T  39130746 atgtcgagcacgtgttgtgtccgacaccgacacatataattacactaaattatataattttctaaaattattaatagtgtcagcgtgtcaatatccatgt 39130845  T
Q  146 cgtgtccgatatccgtat 163  Q
    |||||||| | |||||||    
T  39130846 cgtgtccggtgtccgtat 39130863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 151
Target Start/End: Complemental strand, 34298482 - 34298411
Alignment:
Q  80 tataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtc 151  Q
    ||||||||||| ||||||||||||||| | ||||||||| |||||||| ||||||||| |||||||||||||    
T  34298482 tataattacactgaattatgtgattttctcaaattattagtggtgtcggtgtgtcagtttccgtgtcgtgtc 34298411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 142
Target Start/End: Complemental strand, 37598938 - 37598816
Alignment:
Q  19 gacacttctcggattaggtgtgtcttcatgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||| ||||||||||| |||||    ||||| || ||||| |||||| |||||||||| ||||||||||| ||||| ||||||||||| |||||||||    
T  37598938 gacactcctcggattaggcgtgtcccattgtcggacacgtgtcgtgtccgacaccgacacttataattacactgaatt-tgtgattttttcaaattatta 37598840  T
Q  119 atggtgtcgatgtgtcagtgtccg 142  Q
     | ||||||  |||||||||||||    
T  37598839 gttgtgtcggcgtgtcagtgtccg 37598816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 62 - 119
Target Start/End: Original strand, 1864875 - 1864932
Alignment:
Q  62 gtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaa 119  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||    
T  1864875 gtgtccaacaccgacacatataattacactgaattatgtgattttctcaaattattaa 1864932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 62 - 151
Target Start/End: Complemental strand, 9709884 - 9709795
Alignment:
Q  62 gtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtc 151  Q
    |||||| |||||||||||||||||||||  ||||||||||||||| | |||||||||  ||||| |   |||||||||||||||||||||    
T  9709884 gtgtccgacaccgacacatataattacaacgaattatgtgattttctcaaattattagcggtgtaggcatgtcagtgtccgtgtcgtgtc 9709795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 69 - 161
Target Start/End: Original strand, 1486711 - 1486803
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccgt 161  Q
    |||||||||| ||||||||||| ||||||||||||||||| |||||||||   |||||   |||||||| |||||||||| |||| |||||||    
T  1486711 acaccgacacttataattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtatccgtgtcgtatccggtatccgt 1486803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 26 - 146
Target Start/End: Original strand, 38078620 - 38078740
Alignment:
Q  26 ctcggattaggtgtgtcttcatgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgt 125  Q
    ||||||||||| ||||| |  ||| ||||  |||| |||||| |||||||||| | ||||||||  ||||||||||||||||| |||||||||   ||||    
T  38078620 ctcggattaggcgtgtcctggtgttgaacatgtgtcgtgtccgacaccgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgt 38078719  T
Q  126 cgatgtgtcagtgtccgtgtc 146  Q
    ||| |||||||||| ||||||    
T  38078720 cgacgtgtcagtgttcgtgtc 38078740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 40258885 - 40258993
Alignment:
Q  19 gacacttctcggattaggtgtgtcttcatgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||| ||||||||||| ||||| |  ||||| ||  |||| |||||  |||||||||| | ||||||||| ||||||||||||||||| |||||||||    
T  40258885 gacactcctcggattaggcgtgtcctggtgtcggacaggtgtcgtgtctgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 40258984  T
Q  119 atggtgtcg 127  Q
    || ||||||    
T  40258985 attgtgtcg 40258993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 69 - 161
Target Start/End: Complemental strand, 47989554 - 47989463
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccgt 161  Q
    |||||||||| | ||||||||| ||||||||||||||||| |||||||| || ||||||  ||||||||||| |||||||||| | |||||||    
T  47989554 acaccgacacttgtaattacactgaattatgtgatttttttaaattatt-attgtgtcggcgtgtcagtgtctgtgtcgtgtctggtatccgt 47989463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 62 - 146
Target Start/End: Complemental strand, 52903313 - 52903229
Alignment:
Q  62 gtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtc 146  Q
    |||||| |||||||||||||||||||||| ||||||| ||||||| | |||||||||| ||| |||  |||| ||||||||||||    
T  52903313 gtgtccgacaccgacacatataattacactgaattatatgattttattaaattattaacggtatcggcgtgttagtgtccgtgtc 52903229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 69 - 152
Target Start/End: Complemental strand, 38503377 - 38503294
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtcc 152  Q
    |||||||||||||||||||||| ||| ||| ||||||| | |||||||||  ||||||| ||||| |||||||||||| |||||    
T  38503377 acaccgacacatataattacactgaaatatatgattttctcaaattattagcggtgtcggtgtgttagtgtccgtgtcatgtcc 38503294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 69 - 143
Target Start/End: Complemental strand, 1815314 - 1815240
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgt 143  Q
    |||||||||| | ||||||||| |||||||||||||||||||||| |||| | ||||||  ||||||||||||||    
T  1815314 acaccgacacttgtaattacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 1815240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 153
Target Start/End: Original strand, 2896073 - 2896207
Alignment:
Q  19 gacacttctcggattaggtgtgtcttcatgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    ||||||||| ||||||||||||||    | ||| || | ||| |||||  ||||||||| |||||  ||||| ||||||||||||||| | |||||||||    
T  2896073 gacacttcttggattaggtgtgtcccggtctcggacacatgtcgtgtctgacaccgacatatatagctacactgaattatgtgattttctcaaattatta 2896172  T
Q  119 atggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
      |||||||  |||||||||||||||| |||||||    
T  2896173 gcggtgtcggcgtgtcagtgtccgtgttgtgtccg 2896207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 117
Target Start/End: Complemental strand, 18337408 - 18337338
Alignment:
Q  47 tgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattatt 117  Q
    ||||| || |||||||||||| |||||||||| | ||||||||| ||||||||||||||||| ||||||||    
T  18337408 tgtcggacacgtgttgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatt 18337338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 40181941 - 40181879
Alignment:
Q  56 cgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||||||||| ||||||| |||||||||||||| ||||||||||||||| | |||||||||    
T  40181941 cgtgttgtgtccgacaccgatacatataattacactgaattatgtgattttctcaaattatta 40181879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 153
Target Start/End: Original strand, 5898255 - 5898352
Alignment:
Q  56 cgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    ||||| |||||  |||||||| ||||||||||||| ||||||||||||||||| | |||||||  |||||||  || |||||||| ||||| ||||||    
T  5898255 cgtgtcgtgtctgacaccgacgcatataattacactgaattatgtgattttttcagattattagcggtgtcggcgtctcagtgtctgtgtcatgtccg 5898352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 153
Target Start/End: Original strand, 5376502 - 5376586
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    |||||||||| | ||||||||| ||||||||| ||||| | |||||||||  |||||||  |||| |||||||||||||||||||    
T  5376502 acaccgacacttttaattacactgaattatgttattttcttaaattattagcggtgtcggcgtgttagtgtccgtgtcgtgtccg 5376586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 153
Target Start/End: Complemental strand, 6427407 - 6427323
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    ||||| |||||||||||||||  ||||||||||||||| | |||||||||  ||||| |  ||||||||||||||| ||||||||    
T  6427407 acaccaacacatataattacattgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccgtgccgtgtccg 6427323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 153
Target Start/End: Original strand, 6612173 - 6612257
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    |||||||||| | ||||||||| ||||||||| ||||||| ||||||||||  || |||  |||||| |||||||||||||||||    
T  6612173 acaccgacacttgtaattacactgaattatgtaattttttcaaattattaactgtatcggcgtgtcattgtccgtgtcgtgtccg 6612257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 153
Target Start/End: Original strand, 7918213 - 7918297
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    |||| ||||||||||||||||| ||||||||||||||| | ||||||||| || ||||   |||||| |||| ||||||||||||    
T  7918213 acactgacacatataattacactgaattatgtgattttctcaaattattagtgatgtcagcgtgtcattgtctgtgtcgtgtccg 7918297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 149
Target Start/End: Original strand, 9629902 - 9629982
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtg 149  Q
    |||||||||| |||||| |||| ||||||| ||||||| | |||||||||  |||||||||||||| |||||| |||||||    
T  9629902 acaccgacacttataatcacactgaattatatgattttatcaaattattagcggtgtcgatgtgtcggtgtccatgtcgtg 9629982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 155
Target Start/End: Original strand, 34257914 - 34257998
Alignment:
Q  71 accgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgat 155  Q
    ||||||| ||||||||||||  |||||||||||||| | |||||||||| |||||||| |||||| | ||||| || ||||||||    
T  34257914 accgacatatataattacactaaattatgtgattttattaaattattaacggtgtcgacgtgtcaatatccgtatcatgtccgat 34257998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 146
Target Start/End: Original strand, 46348342 - 46348462
Alignment:
Q  26 ctcggattaggtgtgtcttcatgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgt 125  Q
    ||||||| ||| ||||||   ||||| || ||||| |||||| |||||||||| | |||||||||  |||||| ||||||||| |||||||||   ||||    
T  46348342 ctcggatcaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgt 46348441  T
Q  126 cgatgtgtcagtgtccgtgtc 146  Q
    ||  |||||||||||||||||    
T  46348442 cggcgtgtcagtgtccgtgtc 46348462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 65 - 152
Target Start/End: Complemental strand, 21378639 - 21378552
Alignment:
Q  65 tccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtcc 152  Q
    |||||||||||||| | ||||||||| ||||||||| ||||||| || ||||||   |||||| ||||||  ||||||||||||||||    
T  21378639 tccaacaccgacacttgtaattacactgaattatgtaattttttcaatttattagctgtgtcggtgtgtccatgtccgtgtcgtgtcc 21378552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 57 - 140
Target Start/End: Original strand, 22881606 - 22881689
Alignment:
Q  57 gtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtc 140  Q
    |||| |||||| |||||||||| | |||||||||  |||||||||||||||| ||||||||| | ||||||  |||||||||||    
T  22881606 gtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtc 22881689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 69 - 140
Target Start/End: Complemental strand, 36878518 - 36878447
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtc 140  Q
    |||||||||| ||||||||||| ||||||||||||||| | |||||||||  |||||||  |||||||||||    
T  36878518 acaccgacacctataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtc 36878447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 127
Target Start/End: Original strand, 39953139 - 39953206
Alignment:
Q  60 ttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcg 127  Q
    |||||||| ||||||||||||| ||||||||  |||||||||||||| |||||||||||  |||||||    
T  39953139 ttgtgtccgacaccgacacatacaattacactaaattatgtgattttctaaaattattagcggtgtcg 39953206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 155
Target Start/End: Original strand, 2288164 - 2288255
Alignment:
Q  62 gtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgat 155  Q
    |||||| |||||||||||||  ||||||  ||||||||||||||| | ||||||||| || ||||| ||||| ||||||  |||||||||||||    
T  2288164 gtgtccgacaccgacacata--attacattgaattatgtgattttcttaaattattattgttgtcggtgtgttagtgtctatgtcgtgtccgat 2288255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 127
Target Start/End: Complemental strand, 9828101 - 9828043
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcg 127  Q
    ||||||||||||| |||||||| ||||||||||||||| | ||||||||| ||||||||    
T  9828101 acaccgacacataaaattacactgaattatgtgattttatcaaattattagtggtgtcg 9828043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 92 - 146
Target Start/End: Complemental strand, 16812577 - 16812523
Alignment:
Q  92 gaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtc 146  Q
    ||||||||||||||| | ||||||||| |||||||| ||||||||||||||||||    
T  16812577 gaattatgtgattttgtcaaattattattggtgtcggtgtgtcagtgtccgtgtc 16812523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 118
Target Start/End: Original strand, 18190061 - 18190159
Alignment:
Q  20 acacttctcggattaggtgtgtcttcatgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    ||||| |||||||||||||||||    ||||| || |||||||||||  ||| |||||| | ||||||||| ||||||||| ||||||| |||||||||    
T  18190061 acactcctcggattaggtgtgtcccggtgtcggacacgtgttgtgtctgacatcgacacttgtaattacactgaattatgtaattttttcaaattatta 18190159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 112
Target Start/End: Complemental strand, 30749904 - 30749854
Alignment:
Q  62 gtgtccaacaccgacacatataattacacagaattatgtgattttttaaaa 112  Q
    |||||| |||||||||||||||||||||| ||||||||||||||| |||||    
T  30749904 gtgtccgacaccgacacatataattacactgaattatgtgattttctaaaa 30749854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 112
Target Start/End: Complemental strand, 30771355 - 30771305
Alignment:
Q  62 gtgtccaacaccgacacatataattacacagaattatgtgattttttaaaa 112  Q
    |||||| |||||||||||||||||||||| ||||||||||||||| |||||    
T  30771355 gtgtccgacaccgacacatataattacactgaattatgtgattttctaaaa 30771305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 155
Target Start/End: Complemental strand, 5944340 - 5944252
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgatttttta--aaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgat 155  Q
    |||||||||| ||||||||||| |||||||||||||||||   |||||||||   ||| ||  ||||||||||| ||||||||||||||    
T  5944340 acaccgacacttataattacactgaattatgtgattttttttcaaattattagctgtggcggcgtgtcagtgtctgtgtcgtgtccgat 5944252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 144
Target Start/End: Original strand, 9033021 - 9033085
Alignment:
Q  81 ataattacacagaattatgtgatttttta-aaattattaatggtgtcgatgtgtcagtgtccgtg 144  Q
    |||||||||| |||||||||||||||||  ||||||||| |||||| || |||||||||||||||    
T  9033021 ataattacactgaattatgtgatttttttcaaattattagtggtgttgacgtgtcagtgtccgtg 9033085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 134
Target Start/End: Complemental strand, 10233313 - 10233245
Alignment:
Q  66 ccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtc 134  Q
    ||||||| ||||||||||||||||| ||||||||||||||| | || |||||| |||||| | ||||||    
T  10233313 ccaacacagacacatataattacactgaattatgtgattttctcaatttattagtggtgttggtgtgtc 10233245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 125
Target Start/End: Original strand, 14332637 - 14332700
Alignment:
Q  62 gtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgt 125  Q
    |||||| ||||||| ||||||||||||||  |||||||||||||| | ||||||||| ||||||    
T  14332637 gtgtccgacaccgagacatataattacactaaattatgtgattttctcaaattattagtggtgt 14332700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 153
Target Start/End: Complemental strand, 15323215 - 15323136
Alignment:
Q  74 gacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    ||||| || ||||||||  |||||||||||||||| ||||||||||  || ||||  ||||||||||| |||||||||||    
T  15323215 gacacttacaattacactaaattatgtgattttttcaaattattaactgtatcgacatgtcagtgtccatgtcgtgtccg 15323136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 22515839 - 22515938
Alignment:
Q  19 gacacttctcggattaggtgtgtcttcatgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||| ||||||||||| ||||||   ||||| |   |||| |||||| |||||||||| | |||||||||  |||||||||||||||| |||||||||    
T  22515839 gacactcctcggattaggcgtgtctcggtgtcggatatgtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 22515938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 141
Target Start/End: Original strand, 31672890 - 31672969
Alignment:
Q  62 gtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtcc 141  Q
    |||||| ||||||| || | ||||||||| |||||| |||||||||| |||||||||   |||||| |||||||||||||    
T  31672890 gtgtccgacaccgagacttgtaattacactgaattaagtgattttttcaaattattagctgtgtcggtgtgtcagtgtcc 31672969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 150
Target Start/End: Original strand, 42359445 - 42359532
Alignment:
Q  63 tgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgt 150  Q
    ||||| |||||||||| | ||||||||| ||||| ||||||||||| |||||||||   |||||   |||||||||||||||| ||||    
T  42359445 tgtccgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagatgtgtcagcgtgtcagtgtccgtgttgtgt 42359532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 116
Target Start/End: Complemental strand, 44482287 - 44482240
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattat 116  Q
    |||||||||||||||||||||| ||||||||||||||| | |||||||    
T  44482287 acaccgacacatataattacactgaattatgtgattttctcaaattat 44482240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 143
Target Start/End: Original strand, 1704994 - 1705068
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgt 143  Q
    |||||||||| | ||||||| | ||||||||||||||||| |||||||||   |||||| |||||| ||||||||    
T  1704994 acaccgacacttgtaattaccctgaattatgtgattttttcaaattattagatgtgtcggtgtgtcggtgtccgt 1705068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 127
Target Start/End: Complemental strand, 25361943 - 25361885
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcg 127  Q
    |||| ||||||||||||||||| ||||||||||||||| | ||||||| | ||||||||    
T  25361943 acactgacacatataattacactgaattatgtgattttctcaaattatcagtggtgtcg 25361885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 127
Target Start/End: Original strand, 43492484 - 43492554
Alignment:
Q  57 gtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcg 127  Q
    ||||||||||  ||||||||||| |||||||||| |||||| |||||||| | |||||| || ||||||||    
T  43492484 gtgttgtgtctgacaccgacacacataattacaccgaattacgtgattttctcaaattactagtggtgtcg 43492554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 153
Target Start/End: Original strand, 10577740 - 10577821
Alignment:
Q  72 ccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    ||||||||||||||||||| | ||| ||||||||| |||||  ||||   ||||||  ||||| ||||||||||||||||||    
T  10577740 ccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtcggtgtccgtgtcgtgtccg 10577821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 16927187 - 16927268
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgt 150  Q
    ||||| ||| |||||||||||| ||||||| ||||||||| |||||||||    || ||| ||||||||||| |||||||||    
T  16927187 acaccaacatatataattacactgaattatatgattttttcaaattattagctatgccgacgtgtcagtgtctgtgtcgtgt 16927268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 18471355 - 18471263
Alignment:
Q  71 accgacacatataattacacagaattatgtgatttttta--aaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccgt 161  Q
    |||||||| | |||||| || |||||||||||||||||   |||||||||   ||||||| | |||| |||||||||||| ||||||||||||    
T  18471355 accgacacttgtaattatactgaattatgtgattttttttcaaattattagctgtgtcgacgggtcattgtccgtgtcgtatccgatatccgt 18471263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 118
Target Start/End: Original strand, 24577188 - 24577237
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||||||| | ||||||||| ||||||||||||||||| |||||||||    
T  24577188 acaccgacacttgtaattacactgaattatgtgattttttcaaattatta 24577237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 106
Target Start/End: Complemental strand, 34371770 - 34371733
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgatttt 106  Q
    |||||||||||||||||||||| |||||||||||||||    
T  34371770 acaccgacacatataattacactgaattatgtgatttt 34371733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 153
Target Start/End: Original strand, 48450592 - 48450673
Alignment:
Q  72 ccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    ||||||| | |||||||||  |||||||| ||||||| |||||||||   |||| |  ||||||||||||||||||||||||    
T  48450592 ccgacacttgtaattacactaaattatgttattttttcaaattattagctgtgttggcgtgtcagtgtccgtgtcgtgtccg 48450673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 127
Target Start/End: Complemental strand, 2784623 - 2784555
Alignment:
Q  59 gttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcg 127  Q
    ||||||||  ||||||||||||||||||| ||  |||||||||||||| | ||||| |||| |||||||    
T  2784623 gttgtgtctgacaccgacacatataattatactcaattatgtgattttcttaaatttttaacggtgtcg 2784555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 139
Target Start/End: Original strand, 9449024 - 9449080
Alignment:
Q  83 aattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgt 139  Q
    ||||| || ||||||||||||||||| |||||||||||||||| | |||||| ||||    
T  9449024 aattatactgaattatgtgattttttcaaattattaatggtgttggtgtgtctgtgt 9449080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 13436522 - 13436466
Alignment:
Q  62 gtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||| ||||| |||||||||||||||| ||||||||||||||  | |||||||||    
T  13436522 gtgtccgacaccaacacatataattacactgaattatgtgatttccttaaattatta 13436466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 134
Target Start/End: Complemental strand, 19637832 - 19637760
Alignment:
Q  62 gtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtc 134  Q
    |||||| |||||||||||||| ||||||  |||| |||| ||||| | |||||||||  ||||||||||||||    
T  19637832 gtgtccgacaccgacacatatgattacattgaataatgtcattttcttaaattattatcggtgtcgatgtgtc 19637760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 161
Target Start/End: Original strand, 22794084 - 22794172
Alignment:
Q  73 cgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccgt 161  Q
    |||||| ||||||||||| | ||||||| ||||||| |||||||||   |||| || |||||||||||  |||||| |||| |||||||    
T  22794084 cgacacctataattacactgtattatgtcattttttcaaattattatccgtgttgacgtgtcagtgtctatgtcgtatccggtatccgt 22794172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 150
Target Start/End: Original strand, 23636040 - 23636132
Alignment:
Q  58 tgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgt 150  Q
    |||||||||  ||||||||||||| |||||||| ||||||||| ||||| | ||||| ||   ||| |||  |||||| ||||||||||||||    
T  23636040 tgttgtgtctgacaccgacacatacaattacactgaattatgtaattttctcaaatttttggcggtttcggcgtgtcaatgtccgtgtcgtgt 23636132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 153
Target Start/End: Original strand, 27471568 - 27471652
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    ||||| |||||| ||||||||| |||||||||| |||| | |||||||||  ||| ||| |||||||||||  |||||| |||||    
T  27471568 acaccaacacatgtaattacactgaattatgtgcttttctcaaattattagcggtatcggtgtgtcagtgtttgtgtcgcgtccg 27471652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 163
Target Start/End: Complemental strand, 34315767 - 34315676
Alignment:
Q  71 accgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccgtat 163  Q
    |||||||||||||||||||| |||||||||  ||||||||||   |||   ||||||   ||||||| |||||||||||||| ||||||||||    
T  34315767 accgacacatataattacaccgaattatgtagttttttaaaaaatttagctgtgtcggcatgtcagtatccgtgtcgtgtcc-atatccgtat 34315676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 108
Target Start/End: Complemental strand, 51410095 - 51410043
Alignment:
Q  56 cgtgttgtgtccaacaccgacacatataattacacagaattatgtgatttttt 108  Q
    ||||| |||||| |||||||||| | ||||||||| |||||||||||||||||    
T  51410095 cgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgatttttt 51410043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 158
Target Start/End: Original strand, 8842678 - 8842805
Alignment:
Q  31 attaggtgtgtcttcatgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatg 130  Q
    |||||| ||||| | |||||| |  ||||| |||||| ||||| | |||||||||||||   |||||| || |||| | |||||| || ||||| ||  |    
T  8842678 attaggcgtgtcctgatgtcggatacgtgtcgtgtccgacaccaatacatataattacattaaattatatgtttttctcaaattactagtggtgccggcg 8842777  T
Q  131 tgtcagtgtccgtgtcgtgtccgatatc 158  Q
    |||||||||| ||||| |||||||||||    
T  8842778 tgtcagtgtctgtgtcatgtccgatatc 8842805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 140
Target Start/End: Original strand, 17831537 - 17831604
Alignment:
Q  73 cgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtc 140  Q
    |||||||||| ||||||| |||| |||||||||| | |||||||||  |||||||  |||||||||||    
T  17831537 cgacacatatgattacactgaataatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtc 17831604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 140
Target Start/End: Original strand, 22907329 - 22907412
Alignment:
Q  57 gtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtc 140  Q
    ||||||||||| |||||||||| |||||||| ||  |||||| | ||||| | |||||||||| || ||||| ||||| |||||    
T  22907329 gtgttgtgtcccacaccgacacttataattataccaaattatataattttctcaaattattaacggcgtcgacgtgtctgtgtc 22907412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 135
Target Start/End: Complemental strand, 33230783 - 33230716
Alignment:
Q  68 aacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtca 135  Q
    |||||||||||||||| |||||   |||||||| | ||||| |||||||||| | |||||||||||||    
T  33230783 aacaccgacacatatatttacattaaattatgtaaatttttcaaattattaacgatgtcgatgtgtca 33230716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 155
Target Start/End: Original strand, 609452 - 609546
Alignment:
Q  61 tgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgat 155  Q
    ||||||||| ||||||| |||| ||||    ||||||||| ||||| | ||||||||| ||||||||  ||||||||||   |||||||||||||    
T  609452 tgtgtccaataccgacatatatgattatgttgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgttgatgtcgtgtccgat 609546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 162
Target Start/End: Complemental strand, 1262918 - 1262848
Alignment:
Q  92 gaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccgta 162  Q
    ||||||||||||||| | |||||||||   ||||||  ||||| |||| ||||||||||||| ||||||||    
T  1262918 gaattatgtgattttctcaaattattagctgtgtcggcgtgtccgtgttcgtgtcgtgtccggtatccgta 1262848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 151
Target Start/End: Complemental strand, 9103673 - 9103615
Alignment:
Q  93 aattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtc 151  Q
    |||||||||||||||| ||||||||||  ||||||  ||||||||||||| ||| ||||    
T  9103673 aattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgagtcctgtc 9103615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 150
Target Start/End: Original strand, 13011205 - 13011299
Alignment:
Q  57 gtgttgtgtccaacaccgacacatataattacacagaattatgtga-ttttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgt 150  Q
    ||||||||||||| ||| |||| | |||||||||  |||||||||| |||||| |||||||||   ||||||   ||||||||| ||||||||||    
T  13011205 gtgttgtgtccaaaaccaacacttgtaattacacttaattatgtgatttttttcaaattattagctgtgtcggcatgtcagtgttcgtgtcgtgt 13011299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 161
Target Start/End: Original strand, 15641042 - 15641124
Alignment:
Q  79 atataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccgt 161  Q
    ||||| |||||| |||| |||||||||| | |||||||||   ||||||   |||||||||||||||| |||||||| |||||    
T  15641042 atatagttacactgaatcatgtgattttcttaaattattagcagtgtcggcatgtcagtgtccgtgtcatgtccgatgtccgt 15641124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 140
Target Start/End: Complemental strand, 23622370 - 23622304
Alignment:
Q  74 gacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtc 140  Q
    ||||||| ||||||||| || |||||||||||||| ||| ||||| ||||||||  |||| ||||||    
T  23622370 gacacatttaattacactgagttatgtgatttttttaaactattagtggtgtcggcgtgttagtgtc 23622304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 118
Target Start/End: Complemental strand, 23738736 - 23738686
Alignment:
Q  68 aacaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||| |||||| ||||| ||| ||||||||||||||||| |||||||||    
T  23738736 aacaccaacacatttaattgcactgaattatgtgattttttcaaattatta 23738686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 151
Target Start/End: Complemental strand, 25272539 - 25272457
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtc 151  Q
    |||||||||| |||||||||||  |||||||||||||| | ||||| ||||  ||||| | ||||| ||||  ||||||||||    
T  25272539 acaccgacacttataattacactaaattatgtgattttctcaaattgttaactgtgtcaaagtgtctgtgtttgtgtcgtgtc 25272457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 106
Target Start/End: Original strand, 29163370 - 29163420
Alignment:
Q  56 cgtgttgtgtccaacaccgacacatataattacacagaattatgtgatttt 106  Q
    ||||| |||||| ||||||||||||||||||| |  |||||||||||||||    
T  29163370 cgtgtcgtgtccgacaccgacacatataattaaattgaattatgtgatttt 29163420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 141
Target Start/End: Complemental strand, 36906048 - 36905982
Alignment:
Q  75 acacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtcc 141  Q
    |||||||||||||| | ||||||||||||||| | | |||||||  ||||| | |||||||||||||    
T  36906048 acacatataattactctgaattatgtgattttctcagattattagcggtgttggtgtgtcagtgtcc 36905982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 118
Target Start/End: Original strand, 48148039 - 48148089
Alignment:
Q  69 acaccgacacatataattacacagaattatgtga-ttttttaaaattatta 118  Q
    ||||||||| |||||||||||| ||||||| ||| ||||||||||||||||    
T  48148039 acaccgacatatataattacactgaattatatgatttttttaaaattatta 48148089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 118
Target Start/End: Complemental strand, 113356 - 113307
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    ||||| |||| | ||||||||| ||||||||||||||||| |||||||||    
T  113356 acacctacacttgtaattacactgaattatgtgattttttcaaattatta 113307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 146
Target Start/End: Original strand, 6415003 - 6415080
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtc 146  Q
    |||||||||||| |||||| || | ||||||||||||| | |||| ||||  | |||||  |||||||||||||||||    
T  6415003 acaccgacacatctaattaaactgtattatgtgattttctcaaataattagcgatgtcggcgtgtcagtgtccgtgtc 6415080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 148
Target Start/End: Original strand, 16252894 - 16252967
Alignment:
Q  75 acacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgt 148  Q
    |||||||||||||||| |||| || | ||||| |  ||||||||| ||||| ||||| ||||| ||||||||||    
T  16252894 acacatataattacactgaatcatatcattttcttgaattattaacggtgttgatgtatcagtatccgtgtcgt 16252967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 155
Target Start/End: Original strand, 16297298 - 16297371
Alignment:
Q  82 taattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgat 155  Q
    ||||||||| ||||| ||||||||||| | ||||||    ||||||| |||||||| ||||| |||||||||||    
T  16297298 taattacactgaattttgtgattttttcatattatttgctgtgtcgacgtgtcagtatccgtatcgtgtccgat 16297371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 106
Target Start/End: Original strand, 17705592 - 17705625
Alignment:
Q  73 cgacacatataattacacagaattatgtgatttt 106  Q
    |||||||||||||||||| |||||||||||||||    
T  17705592 cgacacatataattacactgaattatgtgatttt 17705625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 107
Target Start/End: Original strand, 24462671 - 24462716
Alignment:
Q  62 gtgtccaacaccgacacatataattacacagaattatgtgattttt 107  Q
    |||||||||||||||| |||||||||||| ||||||| | ||||||    
T  24462671 gtgtccaacaccgacagatataattacactgaattatataattttt 24462716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 116
Target Start/End: Original strand, 25098563 - 25098604
Alignment:
Q  75 acacatataattacacagaattatgtgattttttaaaattat 116  Q
    |||||||||||||||| ||||||||||||||| | |||||||    
T  25098563 acacatataattacactgaattatgtgattttctcaaattat 25098604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 114
Target Start/End: Original strand, 38742985 - 38743042
Alignment:
Q  57 gtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaatt 114  Q
    |||| ||||||||||| |||||||||||||| || |||| |||||| ||||| |||||    
T  38742985 gtgtcgtgtccaacacggacacatataattaaactgaataatgtgacttttttaaatt 38743042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 118
Target Start/End: Original strand, 16164322 - 16164366
Alignment:
Q  74 gacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    ||||||||||||||||   |||||||||||||||| |||||||||    
T  16164322 gacacatataattacattaaattatgtgattttttcaaattatta 16164366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 19324612 - 19324572
Alignment:
Q  76 cacatataattacacagaattatgtgattttttaaaattat 116  Q
    ||||||||||||||| ||||||||||||||| | |||||||    
T  19324612 cacatataattacactgaattatgtgattttctcaaattat 19324572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 145
Target Start/End: Original strand, 19562623 - 19562699
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgt 145  Q
    ||||| |||||||||||||||| ||| |||| |||||| | |||||||||   ||||||  |||||||||| |||||    
T  19562623 acacctacacatataattacactgaactatgagattttctcaaattattagcagtgtcggcgtgtcagtgttcgtgt 19562699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 143
Target Start/End: Original strand, 28268192 - 28268240
Alignment:
Q  95 ttatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgt 143  Q
    |||||||||||| | ||||| ||| |||||||||||||| |||||||||    
T  28268192 ttatgtgattttctcaaatttttagtggtgtcgatgtgttagtgtccgt 28268240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 141
Target Start/End: Original strand, 40285660 - 40285728
Alignment:
Q  73 cgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtcc 141  Q
    |||||||||| | ||||| |||||||| |||||| | |||||||||  ||||| | |||||||||||||    
T  40285660 cgacacatatgactacactgaattatgcgattttctcaaattattagcggtgttggtgtgtcagtgtcc 40285728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 69 - 161
Target Start/End: Complemental strand, 46739 - 46647
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccgt 161  Q
    |||||||||  | ||||||||| ||||||||||||||||| ||||||||||  ||||||  |||||| ||||||||||||||||||| |||||    
T  46739 acaccgacatttgtaattacactgaattatgtgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccgatgtccgt 46647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 69 - 177
Target Start/End: Complemental strand, 20229 - 20121
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccgtatatttg 168  Q
    |||| ||||| | ||||||||| ||||||||||||||||| |||||||||   ||||||  |||||| ||||||||||||||||| | ||||||| | ||    
T  20229 acactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtatctgtg 20130  T
Q  169 ctacatagg 177  Q
    || ||||||    
T  20129 cttcatagg 20121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 150
Target Start/End: Original strand, 414 - 545
Alignment:
Q  19 gacacttctcggattaggtgtgtcttcatgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||| |||||||||||||||||    ||||| || || || |||||| |||||||||| | ||||||||| ||||| ||||||||||| |||||||||    
T  414 gacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacttgtaattacactgaattttgtgattttttcaaattatta 513  T
Q  119 atggtgtcgatgtgtcagtgtccgtgtcgtgt 150  Q
       ||||||  || |||||||||||| |||||    
T  514 gcagtgtcggcgtatcagtgtccgtggcgtgt 545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 153
Target Start/End: Complemental strand, 8894 - 8771
Alignment:
Q  30 gattaggtgtgtcttcatgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgat 129  Q
    ||||||| ||||||   ||||| || ||||| |||||| |||||||||| | |||||||||  ||| || ||||||||| |||||||||   ||||||      
T  8894 gattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaataatatgattttttcaaattattagctgtgtcggc 8795  T
Q  130 gtgtcagtgtccgtgtcgtgtccg 153  Q
    ||||||||||||||||||||||||    
T  8794 gtgtcagtgtccgtgtcgtgtccg 8771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 69 - 148
Target Start/End: Original strand, 135314 - 135393
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgt 148  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||   |||||| |||||  ||||| |||||||    
T  135314 acaccgacacatataattacacagaattatgtgattttctcaaattattagcagtgtcggtgtgttggtgtctgtgtcgt 135393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 56 - 157
Target Start/End: Original strand, 45519 - 45621
Alignment:
Q  56 cgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaa-attattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccga 154  Q
    ||||| |||||| |||||||||| | ||||||||| |||||||||  ||||||  | || |||||| ||||||| |||||||||||||||| ||||||||    
T  45519 cgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtatttttttttagataattaattgtgtcgacgtgtcagtgtccgtgttgtgtccga 45618  T
Q  155 tat 157  Q
    |||    
T  45619 tat 45621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 145
Target Start/End: Complemental strand, 70357 - 70259
Alignment:
Q  47 tgtcgaactcgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgt 145  Q
    ||||| || ||||| |||||| |||||||||| ||||||||||| ||||||||| ||||||| ||||||||||  |||||||  |||| ||||| ||||    
T  70357 tgtcggacacgtgtcgtgtccgacaccgacacttataattacactgaattatgttattttttcaaattattaactgtgtcgacatgtctgtgtctgtgt 70259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 69 - 153
Target Start/End: Original strand, 178820 - 178905
Alignment:
Q  69 acaccgacacatataattacacagaattatg-tgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    |||| ||||| | ||||||||| |||||||| ||||||||| ||||||||| | ||||||  ||||||||||||||||||||||||    
T  178820 acactgacacttgtaattacactgaattatgatgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccg 178905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 151
Target Start/End: Original strand, 192264 - 192333
Alignment:
Q  82 taattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtc 151  Q
    ||||||||| ||||||||| ||||| | |||||||||| |||||||  |||||||||||||| |||||||    
T  192264 taattacaccgaattatgtaattttctcaaattattaacggtgtcggcgtgtcagtgtccgtatcgtgtc 192333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 153
Target Start/End: Complemental strand, 23477 - 23393
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    |||||||||| ||||||||||| |||||||||||||||||  | ||||||   ||||||  ||||||||||| ||||||||||||    
T  23477 acaccgacacttataattacactgaattatgtgatttttttgagttattatctgtgtcggcgtgtcagtgtctgtgtcgtgtccg 23393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 154
Target Start/End: Complemental strand, 23568 - 23482
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgatt-ttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccga 154  Q
    |||| ||||| ||||||||||| ||||||||||||| |||| || |||||||  |||||| |||||||||||  |||||||||||||    
T  23568 acactgacacttataattacactgaattatgtgattttttttaagttattaactgtgtcggtgtgtcagtgtatgtgtcgtgtccga 23482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 153
Target Start/End: Complemental strand, 241651 - 241567
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    ||||||||||  ||||||||||  |||||||||||||||  |||||||||   ||||||  ||||||||||||||||||||||||    
T  241651 acaccgacactcataattacactaaattatgtgatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccg 241567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 70 - 153
Target Start/End: Complemental strand, 130538 - 130455
Alignment:
Q  70 caccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    ||||||||| | ||||||||| ||||||||||||||||| ||| ||||||  ||||||   ||||| |||||||||||||||||    
T  130538 caccgacacttgtaattacactgaattatgtgattttttcaaactattaactgtgtcggcttgtcattgtccgtgtcgtgtccg 130455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 144
Target Start/End: Complemental strand, 28909 - 28832
Alignment:
Q  67 caacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtg 144  Q
    |||||||||||||||||||||||  |||||||| |||||| | |||||||||| |||||||  |||| ||||| ||||    
T  28909 caacaccgacacatataattacattgaattatgcgattttcttaaattattaacggtgtcggcgtgttagtgttcgtg 28832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 151
Target Start/End: Complemental strand, 21098 - 21018
Alignment:
Q  71 accgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtc 151  Q
    ||||||||||||||||| || || |||||||||||| | ||||||||||  |||||    |||||||||||||||||||||    
T  21098 accgacacatataattataccgacttatgtgattttctcaaattattaaccgtgtcagcatgtcagtgtccgtgtcgtgtc 21018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 153
Target Start/End: Complemental strand, 8723 - 8639
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    |||||||||| |||||||| || ||| |||||||||||   |||||||||   ||||||| |||||||||||| |||||||||||    
T  8723 acaccgacacttataattatactgaactatgtgattttcctaaattattagaagtgtcgacgtgtcagtgtccatgtcgtgtccg 8639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 82 - 146
Target Start/End: Complemental strand, 51855 - 51791
Alignment:
Q  82 taattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtc 146  Q
    ||||||||| ||||||||||||||||| |||||||||   ||||||  |||||||||||||||||    
T  51855 taattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 51791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 163
Target Start/End: Complemental strand, 13457 - 13363
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccgtat 163  Q
    |||||||| | | ||||| ||| ||||||||||||||| | ||||||||| | ||||||  ||||||||||||||||| | |||| | |||||||    
T  13457 acaccgacccttgtaattgcactgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtcatctccggtgtccgtat 13363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 163
Target Start/End: Original strand, 21870 - 21964
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccgatatccgtat 163  Q
    |||||||| | | ||||| ||| ||||||||||||||| | ||||||||| | ||||||  ||||||||||||||||| | |||| | |||||||    
T  21870 acaccgacccttgtaattgcactgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtcatctccggtgtccgtat 21964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 151
Target Start/End: Original strand, 3851 - 3933
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtc 151  Q
    |||| ||||| | ||||||||| ||||||||||||||||| ||||||||||  ||||||   | |||||||| ||||||||||    
T  3851 acactgacacttgtaattacactgaattatgtgatttttttaaattattaaccgtgtcggcatatcagtgtctgtgtcgtgtc 3933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 127
Target Start/End: Original strand, 9749 - 9807
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcg 127  Q
    |||||||||||||||||||||| |||||| |||||||| | ||||||||| ||| ||||    
T  9749 acaccgacacatataattacactgaattaagtgattttctcaaattattagtggcgtcg 9807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 146
Target Start/End: Complemental strand, 26446 - 26373
Alignment:
Q  73 cgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtc 146  Q
    ||||||||||||  |||  ||||||||||||||| | ||||||||| ||||||||| |||||| |||| |||||    
T  26446 cgacacatataacgacattgaattatgtgattttctcaaattattagtggtgtcgacgtgtcactgtctgtgtc 26373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 19680 - 19549
Alignment:
Q  26 ctcggattaggtgtgtcttcatgtcgaactcgtgttgtgtccaacaccgacaca-----tataattacacagaattatgtgattttttaaaattattaat 120  Q
    ||||||||| |||||| |   ||||| || ||||| |||||||||||||||| |     | ||||||||| |||||||||||||||| ||| |||||| |    
T  19680 ctcggattaagtgtgtttcggtgtcggacacgtgtcgtgtccaacaccgacataacacttgtaattacactgaattatgtgatttttcaaa-ttattagt 19582  T
Q  121 ggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
     || |||  ||||||||||| ||||||||||||    
T  19581 tgtatcggcgtgtcagtgtcagtgtcgtgtccg 19549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 153
Target Start/End: Original strand, 225274 - 225354
Alignment:
Q  73 cgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    |||||| ||||||||||  | ||||||| ||||| | |||||||||   ||||||  ||||||||||||||||||||||||    
T  225274 cgacacttataattacattgtattatgtcattttctcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtccg 225354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 143
Target Start/End: Original strand, 7021 - 7108
Alignment:
Q  56 cgtgttgtgtccaacaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgt 143  Q
    |||||||||||| ||||| |||| | |||||| ||  |||||||| ||||||| |||||||||   ||||||| || |||||||||||    
T  7021 cgtgttgtgtccgacacctacacttgtaattatactaaattatgtaattttttcaaattattagctgtgtcgacgtatcagtgtccgt 7108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 44529 - 44564
Alignment:
Q  71 accgacacatataattacacagaattatgtgatttt 106  Q
    |||||||||||||||||||| |||||||||||||||    
T  44529 accgacacatataattacactgaattatgtgatttt 44564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 53236 - 53189
Alignment:
Q  70 caccgacacatataattacacagaattatgtgattttttaaaattatt 117  Q
    ||||||||| ||||||||||| ||||||||||||||| | ||||||||    
T  53236 caccgacacttataattacactgaattatgtgattttctcaaattatt 53189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 148
Target Start/End: Original strand, 263374 - 263453
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgt 148  Q
    |||| ||||| ||||||||||| |||||||||| |||| | |||||||||   |||| ||  ||||||||||||||||||    
T  263374 acactgacacttataattacactgaattatgtggttttctcaaattattagcagtgttgacatgtcagtgtccgtgtcgt 263453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1300 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1300
Description:

Target: scaffold1300; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 115
Target Start/End: Complemental strand, 632 - 586
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaatta 115  Q
    |||| |||| ||||||||||||| |||||||||||||||| ||||||    
T  632 acactgacatatataattacacataattatgtgatttttttaaatta 586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 127
Target Start/End: Original strand, 84975 - 85033
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcg 127  Q
    ||||||||| ||||||||||||| |||||| ||||||| | |||||| || ||||||||    
T  84975 acaccgacatatataattacacataattatatgattttcttaaattagtagtggtgtcg 85033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 142
Target Start/End: Complemental strand, 23827 - 23753
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgatt-ttttaaaattattaatggtgtcgatgtgtcagtgtccg 142  Q
    |||||||||| | ||||||||| ||||||||||||| |||| ||||||||||  ||| |  ||||||||||||||    
T  23827 acaccgacacttgtaattacactgaattatgtgatttttttcaaattattaactgtgacagtgtgtcagtgtccg 23753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 127
Target Start/End: Complemental strand, 14574 - 14529
Alignment:
Q  82 taattacacagaattatgtgattttttaaaattattaatggtgtcg 127  Q
    ||||||||| ||||||||||||||||| ||||||||| | ||||||    
T  14574 taattacactgaattatgtgattttttcaaattattagttgtgtcg 14529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 118
Target Start/End: Original strand, 17751 - 17800
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattatta 118  Q
    |||||||||| | |||||||||  |||||||||||||||| |||||||||    
T  17751 acaccgacacttgtaattacactaaattatgtgattttttcaaattatta 17800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 143
Target Start/End: Complemental strand, 92851 - 92790
Alignment:
Q  82 taattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgt 143  Q
    ||||||||| ||||||||| ||||| | |||||||||  |||||||  ||||||||||||||    
T  92851 taattacactgaattatgtaattttctcaaattattagcggtgtcggcgtgtcagtgtccgt 92790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 4982 - 5058
Alignment:
Q  13 agcagagacacttctcggattaggtgtgtcttcatgtcgaactcgtgttgtgtccaacaccgacacatataattaca 89  Q
    |||| ||||||| |||||||||||  |||||  |||||| || ||||| |||||| |||||||||| | ||||||||    
T  4982 agcacagacactcctcggattaggcatgtctcaatgtcggacacgtgtcgtgtccgacaccgacacttgtaattaca 5058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 153
Target Start/End: Complemental strand, 9955 - 9871
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtcgatgtgtcagtgtccgtgtcgtgtccg 153  Q
    |||||||||||||||||||||| | ||| | ||||||| |||||  ||||   ||||||  ||||| |||||| |||||||||||    
T  9955 acaccgacacatataattacactgcattttatgattttctaaaaaaattagctgtgtcggcgtgtcggtgtccatgtcgtgtccg 9871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 160
Target Start/End: Complemental strand, 63830 - 63738
Alignment:
Q  69 acaccgacacatataattacacagaattatgtgattttttaaaattattaatggtgtc-gatgtgtcagtgtccgtgtcgtgtccgatatccg 160  Q
    |||||||||| | ||||| ||| ||||||||| ||||| | |||||||||  |||||  || |||||| |||||||||||| |||| ||||||    
T  63830 acaccgacacttgtaattgcactgaattatgtaattttctcaaattattagcggtgttagacgtgtcattgtccgtgtcgtatccggtatccg 63738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University