View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19396_high_3 (Length: 241)

Name: NF19396_high_3
Description: NF19396
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19396_high_3
NF19396_high_3
[»] chr8 (19 HSPs)
chr8 (40-155)||(29999405-29999520)
chr8 (161-206)||(3029266-3029311)
chr8 (146-206)||(3028656-3028716)
chr8 (153-197)||(10854021-10854065)
chr8 (156-206)||(44622268-44622318)
chr8 (156-209)||(44621604-44621657)
chr8 (146-182)||(39860098-39860134)
chr8 (146-182)||(27442169-27442205)
chr8 (146-182)||(41974628-41974664)
chr8 (164-206)||(19475169-19475211)
chr8 (164-206)||(19546094-19546136)
chr8 (164-206)||(19586560-19586602)
chr8 (146-182)||(3165150-3165186)
chr8 (146-182)||(8997002-8997038)
chr8 (146-182)||(9197083-9197119)
chr8 (146-182)||(27441454-27441490)
chr8 (146-182)||(38576330-38576366)
chr8 (146-182)||(39860902-39860938)
chr8 (154-206)||(40377013-40377065)
[»] chr7 (23 HSPs)
chr7 (146-206)||(47171411-47171471)
chr7 (157-206)||(40496407-40496456)
chr7 (146-206)||(38099242-38099302)
chr7 (146-205)||(9269944-9270002)
chr7 (146-198)||(9269256-9269308)
chr7 (146-206)||(33781586-33781646)
chr7 (159-206)||(9268896-9268943)
chr7 (146-182)||(13785622-13785658)
chr7 (146-182)||(19068424-19068460)
chr7 (146-182)||(30661484-30661520)
chr7 (146-182)||(45099922-45099958)
chr7 (147-182)||(46428175-46428210)
chr7 (176-205)||(10234010-10234039)
chr7 (146-178)||(3688371-3688403)
chr7 (146-182)||(3772555-3772591)
chr7 (146-182)||(3903368-3903404)
chr7 (146-182)||(16664154-16664190)
chr7 (146-182)||(17638514-17638550)
chr7 (146-182)||(27948433-27948469)
chr7 (146-190)||(30400532-30400576)
chr7 (146-182)||(37395528-37395564)
chr7 (146-182)||(37950496-37950532)
chr7 (146-182)||(38225287-38225323)
[»] chr4 (28 HSPs)
chr4 (146-206)||(52408263-52408323)
chr4 (146-206)||(52413635-52413696)
chr4 (145-206)||(51707461-51707522)
chr4 (161-206)||(51708198-51708243)
chr4 (146-206)||(13922567-13922627)
chr4 (150-201)||(24377219-24377270)
chr4 (146-182)||(31329746-31329782)
chr4 (146-182)||(40495083-40495119)
chr4 (146-182)||(53732423-53732459)
chr4 (161-206)||(2039383-2039428)
chr4 (161-206)||(13921835-13921880)
chr4 (146-187)||(45067762-45067803)
chr4 (146-182)||(2182550-2182586)
chr4 (146-182)||(2446190-2446226)
chr4 (146-182)||(5591060-5591096)
chr4 (146-182)||(7841532-7841568)
chr4 (146-178)||(8248553-8248585)
chr4 (146-178)||(8266218-8266250)
chr4 (146-182)||(12368684-12368720)
chr4 (146-182)||(16903697-16903733)
chr4 (146-182)||(19080373-19080409)
chr4 (146-182)||(19551077-19551113)
chr4 (146-182)||(20774209-20774245)
chr4 (146-182)||(26147061-26147097)
chr4 (146-186)||(29101904-29101943)
chr4 (146-182)||(48127274-48127310)
chr4 (150-206)||(50847999-50848055)
chr4 (146-182)||(55976154-55976190)
[»] chr2 (23 HSPs)
chr2 (146-205)||(19405315-19405374)
chr2 (162-206)||(12001083-12001127)
chr2 (147-206)||(4834781-4834840)
chr2 (168-206)||(3666868-3666906)
chr2 (149-198)||(3667463-3667512)
chr2 (161-206)||(42651302-42651347)
chr2 (146-182)||(9540319-9540355)
chr2 (146-182)||(15902108-15902144)
chr2 (161-205)||(19424191-19424235)
chr2 (146-182)||(22301182-22301218)
chr2 (146-182)||(29719434-29719470)
chr2 (146-206)||(39847117-39847177)
chr2 (148-182)||(9276358-9276392)
chr2 (156-206)||(18883879-18883929)
chr2 (156-206)||(38248084-38248134)
chr2 (146-205)||(12964408-12964463)
chr2 (149-206)||(42650562-42650619)
chr2 (146-182)||(1297151-1297187)
chr2 (146-182)||(11751097-11751133)
chr2 (146-182)||(12725643-12725679)
chr2 (146-182)||(24121318-24121354)
chr2 (146-182)||(27177900-27177936)
chr2 (146-206)||(39842183-39842243)
[»] chr1 (26 HSPs)
chr1 (147-206)||(1159061-1159120)
chr1 (155-206)||(1477951-1478002)
chr1 (147-206)||(1478560-1478618)
chr1 (146-206)||(42987152-42987211)
chr1 (155-206)||(35597543-35597594)
chr1 (146-206)||(48117887-48117946)
chr1 (160-206)||(23740511-23740557)
chr1 (160-206)||(35596938-35596984)
chr1 (161-206)||(23626076-23626121)
chr1 (146-206)||(23621649-23621710)
chr1 (160-206)||(23648084-23648132)
chr1 (146-182)||(7406232-7406268)
chr1 (146-182)||(7559228-7559264)
chr1 (146-182)||(27256741-27256777)
chr1 (146-186)||(31572471-31572511)
chr1 (146-182)||(46391895-46391931)
chr1 (162-206)||(23733402-23733448)
chr1 (163-206)||(34082906-34082949)
chr1 (156-187)||(35996865-35996896)
chr1 (160-206)||(23616743-23616791)
chr1 (161-206)||(23625849-23625894)
chr1 (146-182)||(17172691-17172727)
chr1 (146-182)||(25468497-25468533)
chr1 (146-182)||(34309259-34309295)
chr1 (146-182)||(36390396-36390432)
chr1 (146-182)||(49680798-49680834)
[»] chr3 (17 HSPs)
chr3 (153-207)||(19227456-19227510)
chr3 (146-193)||(1488234-1488281)
chr3 (156-206)||(2949036-2949086)
chr3 (146-206)||(7777418-7777477)
chr3 (161-206)||(10702885-10702930)
chr3 (146-187)||(13933671-13933712)
chr3 (146-182)||(13477045-13477081)
chr3 (146-182)||(21726755-21726791)
chr3 (146-182)||(21727558-21727594)
chr3 (146-182)||(48648191-48648227)
chr3 (143-206)||(52696082-52696145)
chr3 (143-182)||(14871138-14871177)
chr3 (146-187)||(7772011-7772051)
chr3 (169-206)||(33291832-33291869)
chr3 (161-205)||(5491856-5491900)
chr3 (146-182)||(20212968-20213004)
chr3 (146-182)||(37988247-37988283)
[»] scaffold1862 (1 HSPs)
scaffold1862 (146-206)||(45-106)
[»] scaffold0434 (1 HSPs)
scaffold0434 (146-206)||(12859-12919)
[»] chr6 (11 HSPs)
chr6 (161-206)||(6106920-6106965)
chr6 (146-206)||(13252839-13252898)
chr6 (151-198)||(6107713-6107760)
chr6 (146-182)||(10171263-10171299)
chr6 (146-182)||(19310988-19311024)
chr6 (146-182)||(19323795-19323831)
chr6 (161-206)||(10092451-10092496)
chr6 (161-206)||(15882152-15882197)
chr6 (146-178)||(18227719-18227751)
chr6 (146-182)||(25060803-25060839)
chr6 (146-182)||(26528810-26528846)
[»] scaffold0504 (1 HSPs)
scaffold0504 (146-182)||(5408-5444)
[»] scaffold0418 (1 HSPs)
scaffold0418 (146-182)||(6913-6949)
[»] scaffold0176 (2 HSPs)
scaffold0176 (146-182)||(26579-26615)
scaffold0176 (146-182)||(27555-27591)
[»] chr5 (11 HSPs)
chr5 (146-182)||(237849-237885)
chr5 (146-182)||(10554509-10554545)
chr5 (146-182)||(19128757-19128793)
chr5 (146-182)||(19359691-19359727)
chr5 (146-182)||(27364515-27364551)
chr5 (146-182)||(28705907-28705943)
chr5 (143-182)||(6476053-6476092)
chr5 (154-206)||(4085668-4085720)
chr5 (146-182)||(7632082-7632118)
chr5 (146-182)||(33470361-33470397)
chr5 (143-187)||(34709276-34709320)
[»] scaffold0096 (1 HSPs)
scaffold0096 (146-182)||(39883-39919)


Alignment Details
Target: chr8 (Bit Score: 96; Significance: 3e-47; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 40 - 155
Target Start/End: Original strand, 29999405 - 29999520
Alignment:
Q  40 gggcaggtaggaaacaataaaatgtgaggtgtgtggcatttcacgacatcagataagtagctagtttccacgatgttttttctttcatacctcatcagtc 139  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||| ||||    
T  29999405 gggcaggtaggaaacaataaaatgtgaggtgtgtggcatttcacgacatcagataaatagctagtttccatgatgttttttcttccatacctcattagtc 29999504  T
Q  140 ttccacatatatatat 155  Q
    ||||| ||||||||||    
T  29999505 ttccatatatatatat 29999520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 161 - 206
Target Start/End: Complemental strand, 3029311 - 3029266
Alignment:
Q  161 aggatccgttgacaccaggtgtaagtcaaaagacttacaccaaatc 206  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  3029311 aggatccgttgacaccagatgtaagtcaaaagacttacaccaaatc 3029266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 206
Target Start/End: Original strand, 3028656 - 3028716
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgtaagtcaaaagacttacaccaaatc 206  Q
    |||||||||  || ||||||||||||||||||||||||||| |||||| ||||||||||||    
T  3028656 atatatataaaagtcaggatccgttgacaccaggtgtaagttaaaagagttacaccaaatc 3028716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 10854021 - 10854065
Alignment:
Q  153 tatgaggcaggatccgttgacaccaggtgtaagtcaaaagactta 197  Q
    |||||| ||||||||||||||||||||||||||||||||||||||    
T  10854021 tatgagtcaggatccgttgacaccaggtgtaagtcaaaagactta 10854065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 206
Target Start/End: Complemental strand, 44622318 - 44622268
Alignment:
Q  156 gaggcaggatccgttgacaccaggtgtaagtcaaaagacttacaccaaatc 206  Q
    ||||||||||||||||||||||||| ||||||  |||||||||||||||||    
T  44622318 gaggcaggatccgttgacaccaggtttaagtcttaagacttacaccaaatc 44622268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 209
Target Start/End: Original strand, 44621604 - 44621657
Alignment:
Q  156 gaggcaggatccgttgacaccaggtgtaagtcaaaagacttacaccaaatccta 209  Q
    ||||||| |||||||||||||||||||||||| |||| ||| ||||||||||||    
T  44621604 gaggcagaatccgttgacaccaggtgtaagtctaaaggcttgcaccaaatccta 44621657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 182
Target Start/End: Original strand, 39860098 - 39860134
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    |||||||||||||||||||||||||||||||||||||    
T  39860098 atatatatatgaggcaggatccgttgacaccaggtgt 39860134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 27442205 - 27442169
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    ||||||||||||| |||||||||||||||||||||||    
T  27442205 atatatatatgagtcaggatccgttgacaccaggtgt 27442169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 182
Target Start/End: Original strand, 41974628 - 41974664
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    ||||||||||||| |||||||||||||||||||||||    
T  41974628 atatatatatgagtcaggatccgttgacaccaggtgt 41974664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 206
Target Start/End: Complemental strand, 19475211 - 19475169
Alignment:
Q  164 atccgttgacaccaggtgtaagtcaaaagacttacaccaaatc 206  Q
    |||||||||||||||||||||||| || ||||| |||||||||    
T  19475211 atccgttgacaccaggtgtaagtctaatgacttgcaccaaatc 19475169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 206
Target Start/End: Complemental strand, 19546136 - 19546094
Alignment:
Q  164 atccgttgacaccaggtgtaagtcaaaagacttacaccaaatc 206  Q
    |||||||||||||||||||||||| || ||||| |||||||||    
T  19546136 atccgttgacaccaggtgtaagtctaatgacttgcaccaaatc 19546094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 206
Target Start/End: Original strand, 19586560 - 19586602
Alignment:
Q  164 atccgttgacaccaggtgtaagtcaaaagacttacaccaaatc 206  Q
    |||||||||||||||||||||||| || ||||| |||||||||    
T  19586560 atccgttgacaccaggtgtaagtctaatgacttgcaccaaatc 19586602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 3165186 - 3165150
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    ||||||||||||| ||||||||||||||| |||||||    
T  3165186 atatatatatgagtcaggatccgttgacatcaggtgt 3165150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 8997038 - 8997002
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    ||||||||||||| ||||||||||||| |||||||||    
T  8997038 atatatatatgagtcaggatccgttgataccaggtgt 8997002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 182
Target Start/End: Original strand, 9197083 - 9197119
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    ||||||||||||| ||| |||||||||||||||||||    
T  9197083 atatatatatgagtcagaatccgttgacaccaggtgt 9197119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 182
Target Start/End: Original strand, 27441454 - 27441490
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    |||||||||||||  ||||||||||||||||||||||    
T  27441454 atatatatatgagataggatccgttgacaccaggtgt 27441490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 38576366 - 38576330
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    |||||||||||||  ||||||||||||||||||||||    
T  38576366 atatatatatgagttaggatccgttgacaccaggtgt 38576330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 39860938 - 39860902
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    |||||||||| || |||||||||||||||||||||||    
T  39860938 atatatatataagacaggatccgttgacaccaggtgt 39860902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 206
Target Start/End: Complemental strand, 40377065 - 40377013
Alignment:
Q  154 atgaggcaggatccgttgacaccaggtgtaagtcaaaagacttacaccaaatc 206  Q
    ||||| || ||| |||| |||||||||||||||| ||||| ||||||||||||    
T  40377065 atgagacatgattcgttaacaccaggtgtaagtctaaagaattacaccaaatc 40377013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 6e-24; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 146 - 206
Target Start/End: Complemental strand, 47171471 - 47171411
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgtaagtcaaaagacttacaccaaatc 206  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  47171471 atatatatatgagtcaggatccgttgacaccaggtgtaagtcaaaagacttacaccaaatc 47171411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 157 - 206
Target Start/End: Complemental strand, 40496456 - 40496407
Alignment:
Q  157 aggcaggatccgttgacaccaggtgtaagtcaaaagacttacaccaaatc 206  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  40496456 aggcaggatccgttgacatcaggtgtaagtcaaaagacttacaccaaatc 40496407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 146 - 206
Target Start/End: Complemental strand, 38099302 - 38099242
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgtaagtcaaaagacttacaccaaatc 206  Q
    ||||||||||||| || |||||||||| ||||||||||||||||||||||| |||||||||    
T  38099302 atatatatatgagtcatgatccgttgataccaggtgtaagtcaaaagacttgcaccaaatc 38099242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 146 - 205
Target Start/End: Complemental strand, 9270002 - 9269944
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgtaagtcaaaagacttacaccaaat 205  Q
    |||||||||| || |||||||||||| ||||||||||||||||||||||||||| |||||    
T  9270002 atatatatat-agtcaggatccgttgtcaccaggtgtaagtcaaaagacttacaacaaat 9269944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 198
Target Start/End: Original strand, 9269256 - 9269308
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgtaagtcaaaagacttac 198  Q
    ||||||||||||  || |||||||||||||||||||||||| |||||||||||    
T  9269256 atatatatatgactcatgatccgttgacaccaggtgtaagttaaaagacttac 9269308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 206
Target Start/End: Original strand, 33781586 - 33781646
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgtaagtcaaaagacttacaccaaatc 206  Q
    |||||||||||||  |||||||||||||| ||||| |||||| || |||||||||||||||    
T  33781586 atatatatatgagttaggatccgttgacatcaggtataagtctaatgacttacaccaaatc 33781646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 9268896 - 9268943
Alignment:
Q  159 gcaggatccgttgacaccaggtgtaagtcaaaagacttacaccaaatc 206  Q
    |||||||||||||||||||||||||||||| |  ||||||||||||||    
T  9268896 gcaggatccgttgacaccaggtgtaagtcatataacttacaccaaatc 9268943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 13785658 - 13785622
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    ||||||||||||| |||||||||||||||||||||||    
T  13785658 atatatatatgagacaggatccgttgacaccaggtgt 13785622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 19068460 - 19068424
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    ||||||||||||| |||||||||||||||||||||||    
T  19068460 atatatatatgagacaggatccgttgacaccaggtgt 19068424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 30661520 - 30661484
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    ||||||||||||| |||||||||||||||||||||||    
T  30661520 atatatatatgagacaggatccgttgacaccaggtgt 30661484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 45099958 - 45099922
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    ||||||||||||| |||||||||||||||||||||||    
T  45099958 atatatatatgagtcaggatccgttgacaccaggtgt 45099922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 182
Target Start/End: Original strand, 46428175 - 46428210
Alignment:
Q  147 tatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    |||||||||||| |||||||||||||||||||||||    
T  46428175 tatatatatgagtcaggatccgttgacaccaggtgt 46428210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 205
Target Start/End: Complemental strand, 10234039 - 10234010
Alignment:
Q  176 caggtgtaagtcaaaagacttacaccaaat 205  Q
    ||||||||||||||||||||||||||||||    
T  10234039 caggtgtaagtcaaaagacttacaccaaat 10234010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 178
Target Start/End: Original strand, 3688371 - 3688403
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccag 178  Q
    ||||||||||||| |||||||||||||||||||    
T  3688371 atatatatatgagacaggatccgttgacaccag 3688403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 3772591 - 3772555
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    |||||||||||||  ||||||||||||||||||||||    
T  3772591 atatatatatgagttaggatccgttgacaccaggtgt 3772555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 3903404 - 3903368
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    |||||||||| || |||||||||||||||||||||||    
T  3903404 atatatatataagtcaggatccgttgacaccaggtgt 3903368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 16664190 - 16664154
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    |||||||||||||  ||||||||||||||||||||||    
T  16664190 atatatatatgagttaggatccgttgacaccaggtgt 16664154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 17638550 - 17638514
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    |||||||||||||  ||||||||||||||||||||||    
T  17638550 atatatatatgagttaggatccgttgacaccaggtgt 17638514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 182
Target Start/End: Original strand, 27948433 - 27948469
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    |||||||||||||  ||||||||||||||||||||||    
T  27948433 atatatatatgagttaggatccgttgacaccaggtgt 27948469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 190
Target Start/End: Original strand, 30400532 - 30400576
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgtaagtcaaa 190  Q
    ||||||||||||| ||  |||||||||||||| ||||||||||||    
T  30400532 atatatatatgagtcaaaatccgttgacaccatgtgtaagtcaaa 30400576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 37395564 - 37395528
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    |||||||||||||  ||||||||||||||||||||||    
T  37395564 atatatatatgagttaggatccgttgacaccaggtgt 37395528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 37950532 - 37950496
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    |||||||||||||  ||||||||||||||||||||||    
T  37950532 atatatatatgagttaggatccgttgacaccaggtgt 37950496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 182
Target Start/End: Original strand, 38225287 - 38225323
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    ||||||||||||| || ||||||||||||||||||||    
T  38225287 atatatatatgagtcatgatccgttgacaccaggtgt 38225323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 2e-21; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 146 - 206
Target Start/End: Original strand, 52408263 - 52408323
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgtaagtcaaaagacttacaccaaatc 206  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  52408263 atatatatatgagacaggatccgttgacaccaggtgtaagtccaaagacttacaccaaatc 52408323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 146 - 206
Target Start/End: Complemental strand, 52413696 - 52413635
Alignment:
Q  146 atatatatat-gaggcaggatccgttgacaccaggtgtaagtcaaaagacttacaccaaatc 206  Q
    |||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  52413696 atatatatatagagacaggatccgttgacaccaggtgtaagtccaaagacttacaccaaatc 52413635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 51707461 - 51707522
Alignment:
Q  145 catatatatatgaggcaggatccgttgacaccaggtgtaagtcaaaagacttacaccaaatc 206  Q
    |||||||||| ||| ||| |||||||||||||||||||||||| ||||| ||||||||||||    
T  51707461 catatatatacgagtcagaatccgttgacaccaggtgtaagtctaaagatttacaccaaatc 51707522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 206
Target Start/End: Complemental strand, 51708243 - 51708198
Alignment:
Q  161 aggatccgttgacaccaggtgtaagtcaaaagacttacaccaaatc 206  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||    
T  51708243 aggatccgttgacaccatgtgtaagtcaaaagacttacatcaaatc 51708198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 206
Target Start/End: Complemental strand, 13922627 - 13922567
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgtaagtcaaaagacttacaccaaatc 206  Q
    |||||||||||| ||| |||||||||||||||| | |||||| || |||||||||||||||    
T  13922627 atatatatatgaagcatgatccgttgacaccagatctaagtctaatgacttacaccaaatc 13922567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 201
Target Start/End: Complemental strand, 24377270 - 24377219
Alignment:
Q  150 atatatgaggcaggatccgttgacaccaggtgtaagtcaaaagacttacacc 201  Q
    ||||||||||||||||||||||||||||  | |||||| |||||||||||||    
T  24377270 atatatgaggcaggatccgttgacaccatatataagtctaaagacttacacc 24377219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 31329782 - 31329746
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    ||||||||||||| |||||||||||||||||||||||    
T  31329782 atatatatatgagtcaggatccgttgacaccaggtgt 31329746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 182
Target Start/End: Original strand, 40495083 - 40495119
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    ||||||||||||| |||||||||||||||||||||||    
T  40495083 atatatatatgagtcaggatccgttgacaccaggtgt 40495119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 182
Target Start/End: Original strand, 53732423 - 53732459
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    ||||||||||||| |||||||||||||||||||||||    
T  53732423 atatatatatgagacaggatccgttgacaccaggtgt 53732459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 206
Target Start/End: Original strand, 2039383 - 2039428
Alignment:
Q  161 aggatccgttgacaccaggtgtaagtcaaaagacttacaccaaatc 206  Q
    |||||||||||||||| | ||||||| | |||||||||||||||||    
T  2039383 aggatccgttgacaccggctgtaagtgataagacttacaccaaatc 2039428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 206
Target Start/End: Original strand, 13921835 - 13921880
Alignment:
Q  161 aggatccgttgacaccaggtgtaagtcaaaagacttacaccaaatc 206  Q
    |||||||||||||||||| |||||||| || ||| |||||||||||    
T  13921835 aggatccgttgacaccagatgtaagtctaatgacatacaccaaatc 13921880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 187
Target Start/End: Complemental strand, 45067803 - 45067762
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgtaagtc 187  Q
    |||||||||| |||||||||||||||||| ||| ||||||||    
T  45067803 atatatatataaggcaggatccgttgacagcagatgtaagtc 45067762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 2182586 - 2182550
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    ||||||||||||  |||||||||||||||||||||||    
T  2182586 atatatatatgaaacaggatccgttgacaccaggtgt 2182550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 2446226 - 2446190
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    |||||||||||||  ||||||||||||||||||||||    
T  2446226 atatatatatgagttaggatccgttgacaccaggtgt 2446190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 5591096 - 5591060
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    ||||||||||||| || ||||||||||||||||||||    
T  5591096 atatatatatgagtcaagatccgttgacaccaggtgt 5591060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 182
Target Start/End: Original strand, 7841532 - 7841568
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    ||||||||||||| ||||||||||||||| |||||||    
T  7841532 atatatatatgagtcaggatccgttgacatcaggtgt 7841568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 178
Target Start/End: Complemental strand, 8248585 - 8248553
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccag 178  Q
    ||||||||||||| |||||||||||||||||||    
T  8248585 atatatatatgagtcaggatccgttgacaccag 8248553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 178
Target Start/End: Complemental strand, 8266250 - 8266218
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccag 178  Q
    ||||||||||||| |||||||||||||||||||    
T  8266250 atatatatatgagtcaggatccgttgacaccag 8266218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 12368720 - 12368684
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    ||||||||||||| |||||||||||||||| ||||||    
T  12368720 atatatatatgagtcaggatccgttgacactaggtgt 12368684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 16903733 - 16903697
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    ||||||||||||| |||||| ||||||||||||||||    
T  16903733 atatatatatgagtcaggattcgttgacaccaggtgt 16903697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 182
Target Start/End: Original strand, 19080373 - 19080409
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    ||||||||||||| ||||||| |||||||||||||||    
T  19080373 atatatatatgagacaggatctgttgacaccaggtgt 19080409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 19551113 - 19551077
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    |||||||| |||| |||||||||||||||||||||||    
T  19551113 atatatatgtgagacaggatccgttgacaccaggtgt 19551077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 20774245 - 20774209
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  20774245 atatatatatgagtcaggatccattgacaccaggtgt 20774209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 26147097 - 26147061
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    |||||||||||||  ||||||||||||||||||||||    
T  26147097 atatatatatgagttaggatccgttgacaccaggtgt 26147061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 186
Target Start/End: Complemental strand, 29101943 - 29101904
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgtaagt 186  Q
    |||||||||| |||||||||||||||||| |||||||||||    
T  29101943 atatatatat-aggcaggatccgttgacatcaggtgtaagt 29101904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 182
Target Start/End: Original strand, 48127274 - 48127310
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    ||||||||||||| || ||||||||||||||||||||    
T  48127274 atatatatatgagtcaagatccgttgacaccaggtgt 48127310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 50848055 - 50847999
Alignment:
Q  150 atatatgaggcaggatccgttgacaccaggtgtaagtcaaaagacttacaccaaatc 206  Q
    |||||||||  |||||||||||||| ||||||||||| ||  || ||||||||||||    
T  50848055 atatatgagttaggatccgttgacatcaggtgtaagtgaattgatttacaccaaatc 50847999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 182
Target Start/End: Original strand, 55976154 - 55976190
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    ||||||||||||| ||| |||||||||||||||||||    
T  55976154 atatatatatgagacagaatccgttgacaccaggtgt 55976190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 1e-18; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 146 - 205
Target Start/End: Original strand, 19405315 - 19405374
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgtaagtcaaaagacttacaccaaat 205  Q
    |||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||    
T  19405315 atatatatatgaggcaggatctattgacaccaggtgtaagttaaaagacttacaccaaat 19405374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 162 - 206
Target Start/End: Original strand, 12001083 - 12001127
Alignment:
Q  162 ggatccgttgacaccaggtgtaagtcaaaagacttacaccaaatc 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  12001083 ggatccgttgacaccaggtgtaagtcaaaagacttacaccaaatc 12001127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 4834840 - 4834781
Alignment:
Q  147 tatatatatgaggcaggatccgttgacaccaggtgtaagtcaaaagacttacaccaaatc 206  Q
    |||||||||||||||||||| |||||||||| ||||||||||  ||| ||||||||||||    
T  4834840 tatatatatgaggcaggatctgttgacaccatgtgtaagtcattagaattacaccaaatc 4834781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 168 - 206
Target Start/End: Original strand, 3666868 - 3666906
Alignment:
Q  168 gttgacaccaggtgtaagtcaaaagacttacaccaaatc 206  Q
    |||||||||||||||||||||||||||||||||||||||    
T  3666868 gttgacaccaggtgtaagtcaaaagacttacaccaaatc 3666906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 198
Target Start/End: Complemental strand, 3667512 - 3667463
Alignment:
Q  149 tatatatgaggcaggatccgttgacaccaggtgtaagtcaaaagacttac 198  Q
    ||||| |||| ||||||||||||||||||||||||| |||||||||||||    
T  3667512 tatatttgagtcaggatccgttgacaccaggtgtaaatcaaaagacttac 3667463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 206
Target Start/End: Complemental strand, 42651347 - 42651302
Alignment:
Q  161 aggatccgttgacaccaggtgtaagtcaaaagacttacaccaaatc 206  Q
    |||||||||||| | |||||||||||||||||||||||||||||||    
T  42651347 aggatccgttgatatcaggtgtaagtcaaaagacttacaccaaatc 42651302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 182
Target Start/End: Original strand, 9540319 - 9540355
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    ||||||||||||| |||||||||||||||||||||||    
T  9540319 atatatatatgagacaggatccgttgacaccaggtgt 9540355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 182
Target Start/End: Original strand, 15902108 - 15902144
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    ||||||||||||| |||||||||||||||||||||||    
T  15902108 atatatatatgagacaggatccgttgacaccaggtgt 15902144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 205
Target Start/End: Complemental strand, 19424235 - 19424191
Alignment:
Q  161 aggatccgttgacaccaggtgtaagtcaaaagacttacaccaaat 205  Q
    ||||||||||||||||||||||||| |||||| ||| ||||||||    
T  19424235 aggatccgttgacaccaggtgtaagccaaaaggctttcaccaaat 19424191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 182
Target Start/End: Original strand, 22301182 - 22301218
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    ||||||||||||| |||||||||||||||||||||||    
T  22301182 atatatatatgagtcaggatccgttgacaccaggtgt 22301218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 182
Target Start/End: Original strand, 29719434 - 29719470
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    ||||||||||||| |||||||||||||||||||||||    
T  29719434 atatatatatgagacaggatccgttgacaccaggtgt 29719470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 206
Target Start/End: Original strand, 39847117 - 39847177
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgtaagtcaaaagacttacaccaaatc 206  Q
    ||||||||| |||  ||||||| ||||||||||||| |||||||| |||||| ||||||||    
T  39847117 atatatatacgagttaggatccattgacaccaggtgcaagtcaaatgacttataccaaatc 39847177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 182
Target Start/End: Complemental strand, 9276392 - 9276358
Alignment:
Q  148 atatatatgaggcaggatccgttgacaccaggtgt 182  Q
    ||||||||||| |||||||||||||||||||||||    
T  9276392 atatatatgagtcaggatccgttgacaccaggtgt 9276358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 206
Target Start/End: Complemental strand, 18883929 - 18883879
Alignment:
Q  156 gaggcaggatccgttgacaccaggtgtaagtcaaaagacttacaccaaatc 206  Q
    |||||| ||||||||||||||||||||||||||   ||||| |||||||||    
T  18883929 gaggcaagatccgttgacaccaggtgtaagtcatttgacttgcaccaaatc 18883879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 206
Target Start/End: Original strand, 38248084 - 38248134
Alignment:
Q  156 gaggcaggatccgttgacaccaggtgtaagtcaaaagacttacaccaaatc 206  Q
    ||||||||||||||||||||||| |||||||| ||  |||||||| |||||    
T  38248084 gaggcaggatccgttgacaccagatgtaagtcgaataacttacactaaatc 38248134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 205
Target Start/End: Complemental strand, 12964463 - 12964408
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgtaagtcaaaagacttacaccaaat 205  Q
    |||||||||| || ||||||||||||||||   |||||||||| ||||||||||||||||    
T  12964463 atatatatat-agtcaggatccgttgacac---gtgtaagtcacaagacttacaccaaat 12964408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 206
Target Start/End: Original strand, 42650562 - 42650619
Alignment:
Q  149 tatatatgaggcaggatccgttgacaccaggtgtaagtcaaaagacttacaccaaatc 206  Q
    |||||||||||||| ||  ||||||||||| | |||||||||||||||| | ||||||    
T  42650562 tatatatgaggcagaattagttgacaccagatataagtcaaaagacttatatcaaatc 42650619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 1297187 - 1297151
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    |||||||||||||  ||||||||||||||||||||||    
T  1297187 atatatatatgagttaggatccgttgacaccaggtgt 1297151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 11751133 - 11751097
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    |||||||||||||  ||||||||||||||||||||||    
T  11751133 atatatatatgagttaggatccgttgacaccaggtgt 11751097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 12725679 - 12725643
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    |||||||||||||  ||||||||||||||||||||||    
T  12725679 atatatatatgagttaggatccgttgacaccaggtgt 12725643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 24121354 - 24121318
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  24121354 atatatatatgagtcaggatccattgacaccaggtgt 24121318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 182
Target Start/End: Original strand, 27177900 - 27177936
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    |||||||||||||  ||||||||||||||||||||||    
T  27177900 atatatatatgagataggatccgttgacaccaggtgt 27177936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 206
Target Start/End: Original strand, 39842183 - 39842243
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgtaagtcaaaagacttacaccaaatc 206  Q
    ||||||||| |||  || |||| ||||||||||||| |||||||| |||||| ||||||||    
T  39842183 atatatatacgagttagaatccattgacaccaggtgcaagtcaaatgacttataccaaatc 39842243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 1e-18; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 1159061 - 1159120
Alignment:
Q  147 tatatatatgaggcaggatccgttgacaccaggtgtaagtcaaaagacttacaccaaatc 206  Q
    |||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||    
T  1159061 tatatatatgagacagtatccgttgacatcaggtgtaagtcaaaagacttacaccaaatc 1159120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 155 - 206
Target Start/End: Original strand, 1477951 - 1478002
Alignment:
Q  155 tgaggcaggatccgttgacaccaggtgtaagtcaaaagacttacaccaaatc 206  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  1477951 tgagtcaggatccgttgacaccaggtgtaagtcaaaagacttacaccaaatc 1478002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 1478618 - 1478560
Alignment:
Q  147 tatatatatgaggcaggatccgttgacaccaggtgtaagtcaaaagacttacaccaaatc 206  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  1478618 tatatata-gagtcaggatccgttgacaccaggtgtaagtcaaaagacttacaccaaatc 1478560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 146 - 206
Target Start/End: Original strand, 42987152 - 42987211
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgtaagtcaaaagacttacaccaaatc 206  Q
    |||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  42987152 atatatatat-aggtaggatccgttgacaccaggtgtaagtcaaatgacttacaccaaatc 42987211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 155 - 206
Target Start/End: Complemental strand, 35597594 - 35597543
Alignment:
Q  155 tgaggcaggatccgttgacaccaggtgtaagtcaaaagacttacaccaaatc 206  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  35597594 tgagtcaggatccgttgacaccaggtgtaagtcaaaagatttacaccaaatc 35597543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 206
Target Start/End: Complemental strand, 48117946 - 48117887
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgtaagtcaaaagacttacaccaaatc 206  Q
    ||||||||||||||||| |||||||||||||||||||||||| |  |||||||||||||||    
T  48117946 atatatatatgaggcagaatccgttgacaccaggtgtaagtc-attgacttacaccaaatc 48117887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 206
Target Start/End: Original strand, 23740511 - 23740557
Alignment:
Q  160 caggatccgttgacaccaggtgtaagtcaaaagacttacaccaaatc 206  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||    
T  23740511 caggatccgttgacaccaggtttaagtcaaaagacttacactaaatc 23740557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 206
Target Start/End: Original strand, 35596938 - 35596984
Alignment:
Q  160 caggatccgttgacaccaggtgtaagtcaaaagacttacaccaaatc 206  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||    
T  35596938 caggatccgttgacaccggatgtaagtcaaaagacttacaccaaatc 35596984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 206
Target Start/End: Original strand, 23626076 - 23626121
Alignment:
Q  161 aggatccgttgacaccaggtgtaagtcaaaagacttacaccaaatc 206  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||    
T  23626076 aggatccgttgacaccaggtgtaagtcaaaacatttacaccaaatc 23626121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 206
Target Start/End: Original strand, 23621649 - 23621710
Alignment:
Q  146 atatatatat-gaggcaggatccgttgacaccaggtgtaagtcaaaagacttacaccaaatc 206  Q
    |||||||||| |||| ||||||||||||||||||||||||||   |||||||||| ||||||    
T  23621649 atatatatatagaggtaggatccgttgacaccaggtgtaagtatgaagacttacaacaaatc 23621710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 206
Target Start/End: Original strand, 23648084 - 23648132
Alignment:
Q  160 caggatccgttgacaccaggtgt--aagtcaaaagacttacaccaaatc 206  Q
    |||||||||||||||||||||||  ||||||||||| ||||||||||||    
T  23648084 caggatccgttgacaccaggtgtgtaagtcaaaagatttacaccaaatc 23648132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 182
Target Start/End: Original strand, 7406232 - 7406268
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    ||||||||||||| |||||||||||||||||||||||    
T  7406232 atatatatatgagtcaggatccgttgacaccaggtgt 7406268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 7559264 - 7559228
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    ||||||||||||| |||||||||||||||||||||||    
T  7559264 atatatatatgagacaggatccgttgacaccaggtgt 7559228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 27256777 - 27256741
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    ||||||||||||| |||||||||||||||||||||||    
T  27256777 atatatatatgagacaggatccgttgacaccaggtgt 27256741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 186
Target Start/End: Complemental strand, 31572511 - 31572471
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgtaagt 186  Q
    ||||||||||||| |||||||||||||||||| ||||||||    
T  31572511 atatatatatgagtcaggatccgttgacaccaagtgtaagt 31572471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 46391931 - 46391895
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    ||||||||||||| |||||||||||||||||||||||    
T  46391931 atatatatatgagacaggatccgttgacaccaggtgt 46391895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 206
Target Start/End: Original strand, 23733402 - 23733448
Alignment:
Q  162 ggatccgttgacaccaggtgt--aagtcaaaagacttacaccaaatc 206  Q
    |||||||||||||||||||||  ||||||||||| ||||||||||||    
T  23733402 ggatccgttgacaccaggtgtgtaagtcaaaagatttacaccaaatc 23733448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 206
Target Start/End: Complemental strand, 34082949 - 34082906
Alignment:
Q  163 gatccgttgacaccaggtgtaagtcaaaagacttacaccaaatc 206  Q
    ||||||||||||| ||||||||||||  ||||||||||||||||    
T  34082949 gatccgttgacactaggtgtaagtcattagacttacaccaaatc 34082906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 187
Target Start/End: Complemental strand, 35996896 - 35996865
Alignment:
Q  156 gaggcaggatccgttgacaccaggtgtaagtc 187  Q
    ||||||||||||||||||||||||||||||||    
T  35996896 gaggcaggatccgttgacaccaggtgtaagtc 35996865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 206
Target Start/End: Original strand, 23616743 - 23616791
Alignment:
Q  160 caggatccgttgacaccaggtgt--aagtcaaaagacttacaccaaatc 206  Q
    ||||||||||||||| |||||||  ||||||||||| ||||||||||||    
T  23616743 caggatccgttgacatcaggtgtgtaagtcaaaagatttacaccaaatc 23616791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 206
Target Start/End: Original strand, 23625849 - 23625894
Alignment:
Q  161 aggatccgttgacaccaggtgtaagtcaaaagacttacaccaaatc 206  Q
    |||||||||||||||||| |||| ||||||||| |||||| |||||    
T  23625849 aggatccgttgacaccagatgtatgtcaaaagatttacactaaatc 23625894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 17172727 - 17172691
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    |||||||||||||  ||||||||||||||||||||||    
T  17172727 atatatatatgagataggatccgttgacaccaggtgt 17172691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 182
Target Start/End: Original strand, 25468497 - 25468533
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  25468497 atatatatatgagtcaggatccattgacaccaggtgt 25468533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 34309295 - 34309259
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    |||||||| |||| |||||||||||||||||||||||    
T  34309295 atatatatgtgagacaggatccgttgacaccaggtgt 34309259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 36390432 - 36390396
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    |||||||||||||  ||||||||||||||||||||||    
T  36390432 atatatatatgagttaggatccgttgacaccaggtgt 36390396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 182
Target Start/End: Original strand, 49680798 - 49680834
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    |||||||||||||  ||||||||||||||||||||||    
T  49680798 atatatatatgagttaggatccgttgacaccaggtgt 49680834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 6e-18; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 153 - 207
Target Start/End: Original strand, 19227456 - 19227510
Alignment:
Q  153 tatgaggcaggatccgttgacaccaggtgtaagtcaaaagacttacaccaaatcc 207  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  19227456 tatgaggcaggatccgtttacaccagatgtaagtcaaaagacttacaccaaatcc 19227510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 146 - 193
Target Start/End: Original strand, 1488234 - 1488281
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgtaagtcaaaaga 193  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  1488234 atatatatatgaggcaggatccgttaacaccaggtgtaagtcaaaaga 1488281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 156 - 206
Target Start/End: Original strand, 2949036 - 2949086
Alignment:
Q  156 gaggcaggatccgttgacaccaggtgtaagtcaaaagacttacaccaaatc 206  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||||    
T  2949036 gaggcaggatccgttgacaccaggtgtaagtctaatgacttacaccaaatc 2949086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 206
Target Start/End: Complemental strand, 7777477 - 7777418
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgtaagtcaaaagacttacaccaaatc 206  Q
    ||||||||||||| || |||||||||||||||||||||||||  |||||||||||||||||    
T  7777477 atatatatatgagacaagatccgttgacaccaggtgtaagtc-caagacttacaccaaatc 7777418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 206
Target Start/End: Original strand, 10702885 - 10702930
Alignment:
Q  161 aggatccgttgacaccaggtgtaagtcaaaagacttacaccaaatc 206  Q
    |||||||||||||||||||||||| || || |||||||||||||||    
T  10702885 aggatccgttgacaccaggtgtaattctaatgacttacaccaaatc 10702930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 187
Target Start/End: Complemental strand, 13933712 - 13933671
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgtaagtc 187  Q
    ||||||||||||| ||||||||||||||| ||||||||||||    
T  13933712 atatatatatgagacaggatccgttgacatcaggtgtaagtc 13933671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 182
Target Start/End: Original strand, 13477045 - 13477081
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    ||||||||||||| |||||||||||||||||||||||    
T  13477045 atatatatatgagtcaggatccgttgacaccaggtgt 13477081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 182
Target Start/End: Original strand, 21726755 - 21726791
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    ||||||||||||| |||||||||||||||||||||||    
T  21726755 atatatatatgagacaggatccgttgacaccaggtgt 21726791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 21727594 - 21727558
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    ||||||||||||| |||||||||||||||||||||||    
T  21727594 atatatatatgagacaggatccgttgacaccaggtgt 21727558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 182
Target Start/End: Original strand, 48648191 - 48648227
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    ||||||||||||| |||||||||||||||||||||||    
T  48648191 atatatatatgagtcaggatccgttgacaccaggtgt 48648227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 206
Target Start/End: Complemental strand, 52696145 - 52696082
Alignment:
Q  143 cacatatatatatgaggcaggatccgttgacaccaggtgtaagtc-aaaagacttacaccaaatc 206  Q
    |||| ||||||| ||| ||||||||||||||| |||||||||||| |||| ||||||||||||||    
T  52696145 cacacatatata-gagtcaggatccgttgacaacaggtgtaagtcaaaaaaacttacaccaaatc 52696082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 182
Target Start/End: Original strand, 14871138 - 14871177
Alignment:
Q  143 cacatatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    |||||||||||| ||| |||||||||||||||||||||||    
T  14871138 cacatatatataagagtcaggatccgttgacaccaggtgt 14871177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 187
Target Start/End: Original strand, 7772011 - 7772051
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgtaagtc 187  Q
    |||||||||| || ||||||||||||||||||||||||||||    
T  7772011 atatatatat-agacaggatccgttgacaccaggtgtaagtc 7772051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 206
Target Start/End: Original strand, 33291832 - 33291869
Alignment:
Q  169 ttgacaccaggtgtaagtcaaaagacttacaccaaatc 206  Q
    ||||||| ||||||||||||||| ||||||||||||||    
T  33291832 ttgacactaggtgtaagtcaaaaaacttacaccaaatc 33291869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 5491856 - 5491900
Alignment:
Q  161 aggatccgttgacaccaggtgtaagtcaaaagacttacaccaaat 205  Q
    |||||||||||| || || ||||||| ||||||||||||||||||    
T  5491856 aggatccgttgagacaagatgtaagttaaaagacttacaccaaat 5491900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 182
Target Start/End: Original strand, 20212968 - 20213004
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    ||||||||||||| ||| |||||||||||||||||||    
T  20212968 atatatatatgagtcagaatccgttgacaccaggtgt 20213004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 37988283 - 37988247
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  37988283 atatatatatgagtcaggatccattgacaccaggtgt 37988247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1862 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold1862
Description:

Target: scaffold1862; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 146 - 206
Target Start/End: Complemental strand, 106 - 45
Alignment:
Q  146 atatatatat-gaggcaggatccgttgacaccaggtgtaagtcaaaagacttacaccaaatc 206  Q
    |||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  106 atatatatatagagacaggatccgttgacaccaggtgtaagtccaaagacttacaccaaatc 45  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 146 - 206
Target Start/End: Original strand, 12859 - 12919
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgtaagtcaaaagacttacaccaaatc 206  Q
    |||| |||||||| |||||||||||||||||| |||||||| |||||||||||||||||||    
T  12859 atatgtatatgagacaggatccgttgacaccatgtgtaagttaaaagacttacaccaaatc 12919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 161 - 206
Target Start/End: Original strand, 6106920 - 6106965
Alignment:
Q  161 aggatccgttgacaccaggtgtaagtcaaaagacttacaccaaatc 206  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||    
T  6106920 aggatccgttgacaccaggtgtaagtcaaaagacttacatcaaatc 6106965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 206
Target Start/End: Complemental strand, 13252898 - 13252839
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgtaagtcaaaagacttacaccaaatc 206  Q
    |||||||||| || |||||||||  ||||||||||||||||| ||||||||||||||||||    
T  13252898 atatatatat-agacaggatccgcagacaccaggtgtaagtccaaagacttacaccaaatc 13252839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 198
Target Start/End: Complemental strand, 6107760 - 6107713
Alignment:
Q  151 tatatgaggcaggatccgttgacaccaggtgtaagtcaaaagacttac 198  Q
    |||||||| ||| ||||| |||||||||||||||||||||||||||||    
T  6107760 tatatgagtcagtatccgctgacaccaggtgtaagtcaaaagacttac 6107713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 182
Target Start/End: Original strand, 10171263 - 10171299
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    ||||||||||||| |||||||||||||||||||||||    
T  10171263 atatatatatgagtcaggatccgttgacaccaggtgt 10171299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 182
Target Start/End: Original strand, 19310988 - 19311024
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    ||||||||||||| |||||||||||||||||||||||    
T  19310988 atatatatatgagtcaggatccgttgacaccaggtgt 19311024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 19323831 - 19323795
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    ||||||||||||| |||||||||||||||||||||||    
T  19323831 atatatatatgagacaggatccgttgacaccaggtgt 19323795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 206
Target Start/End: Complemental strand, 10092496 - 10092451
Alignment:
Q  161 aggatccgttgacaccaggtgtaagtcaaaagacttacaccaaatc 206  Q
    |||| ||||||||||||| ||||||||| ||||||||||| |||||    
T  10092496 aggacccgttgacaccagatgtaagtcataagacttacactaaatc 10092451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 206
Target Start/End: Original strand, 15882152 - 15882197
Alignment:
Q  161 aggatccgttgacaccaggtgtaagtcaaaagacttacaccaaatc 206  Q
    ||||||| ||||||||||||||||||| || ||| |||||||||||    
T  15882152 aggatccattgacaccaggtgtaagtctaatgacatacaccaaatc 15882197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 178
Target Start/End: Original strand, 18227719 - 18227751
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccag 178  Q
    ||||||||||||| |||||||||||||||||||    
T  18227719 atatatatatgagtcaggatccgttgacaccag 18227751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 182
Target Start/End: Original strand, 25060803 - 25060839
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    |||||||||||||  ||||||||||||||||||||||    
T  25060803 atatatatatgagttaggatccgttgacaccaggtgt 25060839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 182
Target Start/End: Original strand, 26528810 - 26528846
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    |||||||||||||  ||||||||||||||||||||||    
T  26528810 atatatatatgagttaggatccgttgacaccaggtgt 26528846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 5444 - 5408
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    ||||||||||||| |||||||||||||||||||||||    
T  5444 atatatatatgagtcaggatccgttgacaccaggtgt 5408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0418 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 6949 - 6913
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    ||||||||||||| |||||||||||||||||||||||    
T  6949 atatatatatgagtcaggatccgttgacaccaggtgt 6913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 182
Target Start/End: Original strand, 26579 - 26615
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    ||||||||||||| |||||||||||||||||||||||    
T  26579 atatatatatgagtcaggatccgttgacaccaggtgt 26615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 27591 - 27555
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    ||||||||||||| |||||||||||||||||||||||    
T  27591 atatatatatgagacaggatccgttgacaccaggtgt 27555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.000000001; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 237885 - 237849
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    ||||||||||||| |||||||||||||||||||||||    
T  237885 atatatatatgagtcaggatccgttgacaccaggtgt 237849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 182
Target Start/End: Original strand, 10554509 - 10554545
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    ||||||||||||| |||||||||||||||||||||||    
T  10554509 atatatatatgagacaggatccgttgacaccaggtgt 10554545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 182
Target Start/End: Original strand, 19128757 - 19128793
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    ||||||||||||| |||||||||||||||||||||||    
T  19128757 atatatatatgagtcaggatccgttgacaccaggtgt 19128793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 182
Target Start/End: Original strand, 19359691 - 19359727
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    ||||||||||||| |||||||||||||||||||||||    
T  19359691 atatatatatgagtcaggatccgttgacaccaggtgt 19359727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 27364551 - 27364515
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    ||||||||||||| |||||||||||||||||||||||    
T  27364551 atatatatatgagacaggatccgttgacaccaggtgt 27364515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 28705943 - 28705907
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    ||||||||||||| |||||||||||||||||||||||    
T  28705943 atatatatatgagtcaggatccgttgacaccaggtgt 28705907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 182
Target Start/End: Original strand, 6476053 - 6476092
Alignment:
Q  143 cacatatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    |||||||||||||||| ||||||||||||||||| |||||    
T  6476053 cacatatatatatgagacaggatccgttgacacctggtgt 6476092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 206
Target Start/End: Original strand, 4085668 - 4085720
Alignment:
Q  154 atgaggcaggatccgttgacaccaggtgtaagtcaaaagacttacaccaaatc 206  Q
    ||||| ||||||||||||| ||||| | |||||||||||| |||||| |||||    
T  4085668 atgagtcaggatccgttgataccagatataagtcaaaagatttacactaaatc 4085720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 182
Target Start/End: Original strand, 7632082 - 7632118
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    |||||||||||||  ||||||||||||||||||||||    
T  7632082 atatatatatgagataggatccgttgacaccaggtgt 7632118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 182
Target Start/End: Original strand, 33470361 - 33470397
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    ||||||||||||| ||||||||||| |||||||||||    
T  33470361 atatatatatgagtcaggatccgttaacaccaggtgt 33470397  T

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Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 34709320 - 34709276
Alignment:
Q  143 cacatatatatatgaggcaggatccgttgacaccaggtgtaagtc 187  Q
    ||||||||| |||||||||  |||||||||||| |||||||||||    
T  34709320 cacatatatgtatgaggcaatatccgttgacactaggtgtaagtc 34709276  T

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Target: scaffold0096 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 182
Target Start/End: Original strand, 39883 - 39919
Alignment:
Q  146 atatatatatgaggcaggatccgttgacaccaggtgt 182  Q
    ||||||||||||| ||| |||||||||||||||||||    
T  39883 atatatatatgagtcagaatccgttgacaccaggtgt 39919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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