View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19396_high_4 (Length: 226)

Name: NF19396_high_4
Description: NF19396
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19396_high_4
NF19396_high_4
[»] chr7 (93 HSPs)
chr7 (23-192)||(9778450-9778624)
chr7 (23-190)||(5409771-5409951)
chr7 (22-122)||(21880172-21880272)
chr7 (23-123)||(15680828-15680928)
chr7 (23-123)||(21864827-21864927)
chr7 (24-122)||(32287404-32287502)
chr7 (23-130)||(43027404-43027516)
chr7 (23-190)||(18212973-18213149)
chr7 (21-142)||(24339642-24339774)
chr7 (45-190)||(8234096-8234243)
chr7 (23-190)||(24105629-24105797)
chr7 (23-94)||(598256-598327)
chr7 (24-147)||(20549786-20549909)
chr7 (35-122)||(26733324-26733411)
chr7 (28-190)||(13770635-13770810)
chr7 (23-123)||(32093954-32094060)
chr7 (77-188)||(11061070-11061189)
chr7 (23-118)||(33994236-33994331)
chr7 (20-142)||(25481902-25482024)
chr7 (25-154)||(26033392-26033532)
chr7 (23-95)||(7133212-7133285)
chr7 (35-122)||(12278855-12278942)
chr7 (27-111)||(40287306-40287385)
chr7 (23-190)||(1433398-1433578)
chr7 (75-154)||(19213791-19213870)
chr7 (36-122)||(5835267-5835353)
chr7 (24-142)||(7197238-7197356)
chr7 (21-122)||(21568559-21568661)
chr7 (23-81)||(29763129-29763187)
chr7 (23-72)||(6490786-6490835)
chr7 (22-94)||(38804488-38804561)
chr7 (23-118)||(1401049-1401142)
chr7 (26-122)||(39138464-39138560)
chr7 (23-86)||(17852056-17852119)
chr7 (35-122)||(27093365-27093452)
chr7 (35-122)||(27184849-27184936)
chr7 (28-86)||(43250059-43250118)
chr7 (84-190)||(13300362-13300468)
chr7 (23-73)||(14729772-14729822)
chr7 (23-73)||(40131939-40131989)
chr7 (24-121)||(18035806-18035902)
chr7 (23-185)||(42720830-42720994)
chr7 (24-108)||(10359633-10359717)
chr7 (24-112)||(22484055-22484143)
chr7 (21-88)||(23751953-23752020)
chr7 (75-122)||(9482954-9483001)
chr7 (30-73)||(18215144-18215187)
chr7 (35-122)||(23191916-23192002)
chr7 (23-190)||(25822605-25822785)
chr7 (23-74)||(30813865-30813916)
chr7 (144-190)||(9408410-9408456)
chr7 (35-129)||(14077386-14077480)
chr7 (35-129)||(14387414-14387508)
chr7 (36-94)||(32308179-32308237)
chr7 (23-88)||(2334314-2334379)
chr7 (26-67)||(8842282-8842323)
chr7 (24-130)||(11272531-11272635)
chr7 (24-93)||(11665370-11665439)
chr7 (23-112)||(11738151-11738240)
chr7 (98-190)||(1656628-1656720)
chr7 (83-147)||(3991319-3991383)
chr7 (83-123)||(18039018-18039058)
chr7 (24-88)||(20545185-20545249)
chr7 (83-123)||(21560522-21560562)
chr7 (23-59)||(35862034-35862070)
chr7 (23-67)||(38134335-38134379)
chr7 (36-79)||(3294257-3294300)
chr7 (83-130)||(9408334-9408381)
chr7 (83-122)||(22602710-22602749)
chr7 (50-152)||(25956437-25956536)
chr7 (138-189)||(35861903-35861954)
chr7 (75-121)||(640134-640180)
chr7 (38-95)||(5938524-5938582)
chr7 (84-130)||(7438718-7438764)
chr7 (23-93)||(7438766-7438836)
chr7 (146-188)||(21141053-21141095)
chr7 (25-122)||(22868062-22868164)
chr7 (23-61)||(28973881-28973919)
chr7 (23-61)||(29812598-29812636)
chr7 (45-123)||(41020515-41020593)
chr7 (23-92)||(41229237-41229307)
chr7 (77-122)||(3721113-3721158)
chr7 (23-60)||(3991395-3991432)
chr7 (137-190)||(17851375-17851428)
chr7 (23-56)||(23128603-23128636)
chr7 (23-72)||(28155624-28155673)
chr7 (23-72)||(35749957-35750006)
chr7 (26-82)||(2533761-2533817)
chr7 (83-154)||(19991988-19992060)
chr7 (20-88)||(21138928-21138996)
chr7 (138-190)||(26329445-26329497)
chr7 (78-122)||(28155590-28155634)
chr7 (84-128)||(48438560-48438604)
[»] chr1 (117 HSPs)
chr1 (25-190)||(42359391-42359564)
chr1 (23-190)||(18190048-18190215)
chr1 (23-161)||(18337311-18337448)
chr1 (22-192)||(38078600-38078773)
chr1 (25-189)||(1486646-1486823)
chr1 (23-142)||(22515827-22515946)
chr1 (25-189)||(16297223-16297397)
chr1 (24-152)||(40258874-40259002)
chr1 (23-130)||(37598844-37598950)
chr1 (23-142)||(46348323-46348442)
chr1 (24-191)||(10577676-10577851)
chr1 (37-151)||(40181862-40181976)
chr1 (23-123)||(1815276-1815376)
chr1 (23-123)||(5898206-5898306)
chr1 (23-123)||(51410044-51410144)
chr1 (23-190)||(22881567-22881725)
chr1 (23-94)||(40917808-40917879)
chr1 (17-122)||(52903269-52903371)
chr1 (23-94)||(9828103-9828174)
chr1 (23-94)||(47989556-47989627)
chr1 (25-122)||(29163323-29163420)
chr1 (34-190)||(6612111-6612286)
chr1 (21-190)||(17831460-17831640)
chr1 (23-95)||(32461393-32461465)
chr1 (23-86)||(6427531-6427594)
chr1 (23-141)||(31015044-31015156)
chr1 (21-147)||(1704933-1705056)
chr1 (23-112)||(9690213-9690303)
chr1 (23-191)||(25934571-25934746)
chr1 (23-147)||(27965940-27966062)
chr1 (23-192)||(36878415-36878585)
chr1 (23-142)||(113299-113412)
chr1 (28-187)||(26830542-26830701)
chr1 (25-161)||(17778530-17778670)
chr1 (23-192)||(18471240-18471414)
chr1 (21-95)||(32899937-32900012)
chr1 (23-121)||(38075909-38076008)
chr1 (21-94)||(5944342-5944415)
chr1 (23-122)||(20157284-20157389)
chr1 (83-190)||(24577186-24577289)
chr1 (23-193)||(43492434-43492600)
chr1 (138-190)||(398828-398880)
chr1 (24-120)||(12918967-12919063)
chr1 (23-130)||(22794018-22794125)
chr1 (23-75)||(46940748-46940800)
chr1 (35-122)||(2896073-2896160)
chr1 (23-90)||(18556385-18556452)
chr1 (23-94)||(19562556-19562626)
chr1 (23-122)||(30749860-30749959)
chr1 (23-122)||(30771311-30771410)
chr1 (23-94)||(31694639-31694710)
chr1 (21-111)||(19637799-19637889)
chr1 (24-94)||(21032265-21032335)
chr1 (23-69)||(21365992-21366038)
chr1 (77-147)||(31672889-31672959)
chr1 (23-72)||(29144320-29144369)
chr1 (24-189)||(6414932-6415110)
chr1 (23-94)||(34741894-34741965)
chr1 (23-95)||(41597410-41597482)
chr1 (23-122)||(7918154-7918250)
chr1 (23-78)||(15765822-15765877)
chr1 (23-78)||(16812620-16812675)
chr1 (23-66)||(22947806-22947849)
chr1 (77-147)||(1864874-1864944)
chr1 (23-73)||(2218297-2218347)
chr1 (45-123)||(13997902-13997980)
chr1 (23-73)||(15323237-15323287)
chr1 (77-142)||(19058850-19058915)
chr1 (23-94)||(25361945-25362012)
chr1 (21-122)||(34712321-34712422)
chr1 (23-60)||(35702542-35702579)
chr1 (35-112)||(39130719-39130796)
chr1 (43-83)||(6427594-6427634)
chr1 (24-72)||(10233326-10233374)
chr1 (77-121)||(13436479-13436523)
chr1 (74-122)||(14332633-14332681)
chr1 (77-190)||(41877464-41877585)
chr1 (138-190)||(48548025-48548077)
chr1 (17-56)||(2288119-2288158)
chr1 (22-73)||(8117119-8117170)
chr1 (138-189)||(9103585-9103636)
chr1 (23-94)||(16164244-16164315)
chr1 (77-112)||(24334699-24334734)
chr1 (83-122)||(34371733-34371772)
chr1 (83-122)||(44482250-44482289)
chr1 (47-105)||(8842678-8842736)
chr1 (28-94)||(9629834-9629900)
chr1 (26-76)||(11634066-11634116)
chr1 (85-147)||(21378573-21378635)
chr1 (77-123)||(21620974-21621020)
chr1 (25-123)||(33202922-33203020)
chr1 (76-175)||(35702581-35702682)
chr1 (21-95)||(36906055-36906128)
chr1 (27-73)||(48040418-48040464)
chr1 (23-68)||(6574051-6574096)
chr1 (43-123)||(7353452-7353533)
chr1 (77-122)||(9709840-9709885)
chr1 (138-191)||(21366083-21366136)
chr1 (138-187)||(23531841-23531890)
chr1 (84-129)||(28273089-28273134)
chr1 (137-190)||(38503264-38503317)
chr1 (23-95)||(42004882-42004954)
chr1 (23-72)||(42325629-42325678)
chr1 (162-190)||(2218225-2218253)
chr1 (62-122)||(2784576-2784636)
chr1 (83-123)||(5944302-5944342)
chr1 (83-123)||(6332689-6332729)
chr1 (23-59)||(9630561-9630597)
chr1 (23-95)||(17408749-17408821)
chr1 (23-94)||(26051594-26051665)
chr1 (46-122)||(28674820-28674896)
chr1 (23-67)||(30359440-30359484)
chr1 (22-73)||(35919225-35919277)
chr1 (78-122)||(39953141-39953185)
chr1 (23-71)||(40747707-40747755)
chr1 (138-190)||(41597533-41597585)
chr1 (23-59)||(48450550-48450586)
[»] scaffold0652 (1 HSPs)
scaffold0652 (24-188)||(403-575)
[»] chr4 (111 HSPs)
chr4 (23-190)||(23292926-23293101)
chr4 (25-190)||(4157102-4157266)
chr4 (23-149)||(28964188-28964314)
chr4 (20-192)||(42640474-42640646)
chr4 (21-123)||(49431045-49431147)
chr4 (22-142)||(21945503-21945623)
chr4 (21-147)||(2361913-2362039)
chr4 (24-190)||(3947702-3947874)
chr4 (21-123)||(715543-715647)
chr4 (21-123)||(752869-752973)
chr4 (23-181)||(35157925-35158091)
chr4 (23-192)||(12895214-12895391)
chr4 (53-154)||(29205432-29205533)
chr4 (22-107)||(34306743-34306828)
chr4 (23-123)||(16073413-16073513)
chr4 (23-122)||(8423658-8423757)
chr4 (25-123)||(4157455-4157553)
chr4 (27-123)||(12797282-12797378)
chr4 (23-94)||(53381530-53381602)
chr4 (66-154)||(54580006-54580094)
chr4 (20-94)||(24343560-24343635)
chr4 (23-122)||(35161056-35161155)
chr4 (20-190)||(36635268-36635452)
chr4 (24-188)||(30982808-30982988)
chr4 (42-128)||(40179595-40179681)
chr4 (36-190)||(21873315-21873478)
chr4 (36-190)||(21929176-21929339)
chr4 (26-142)||(28084521-28084640)
chr4 (23-94)||(16184879-16184950)
chr4 (23-94)||(19482727-19482798)
chr4 (39-142)||(38846968-38847071)
chr4 (23-88)||(18513175-18513241)
chr4 (23-93)||(24613630-24613700)
chr4 (21-83)||(29205527-29205589)
chr4 (23-95)||(7012124-7012197)
chr4 (23-130)||(11596297-11596399)
chr4 (23-142)||(4672025-4672144)
chr4 (139-190)||(5111589-5111640)
chr4 (23-94)||(5414101-5414172)
chr4 (82-190)||(15029715-15029825)
chr4 (138-193)||(20633426-20633481)
chr4 (23-94)||(22234819-22234890)
chr4 (119-190)||(28470341-28470412)
chr4 (26-120)||(46715416-46715511)
chr4 (28-94)||(30838269-30838335)
chr4 (20-70)||(37203324-37203374)
chr4 (139-189)||(47191049-47191099)
chr4 (137-190)||(44081639-44081692)
chr4 (23-94)||(944602-944674)
chr4 (23-139)||(12895055-12895172)
chr4 (25-73)||(22440559-22440607)
chr4 (40-123)||(40481655-40481743)
chr4 (23-123)||(2625959-2626055)
chr4 (23-62)||(5775304-5775343)
chr4 (77-128)||(6879459-6879510)
chr4 (46-165)||(9996817-9996936)
chr4 (23-94)||(15724483-15724554)
chr4 (23-78)||(17876230-17876285)
chr4 (23-122)||(19097835-19097933)
chr4 (23-150)||(30103297-30103423)
chr4 (23-66)||(40784029-40784072)
chr4 (23-81)||(3064868-3064926)
chr4 (22-84)||(18966567-18966629)
chr4 (35-77)||(32910628-32910670)
chr4 (24-89)||(848015-848080)
chr4 (28-73)||(3712458-3712503)
chr4 (25-94)||(19312394-19312463)
chr4 (23-72)||(30094083-30094132)
chr4 (21-86)||(32273459-32273524)
chr4 (22-123)||(36509031-36509132)
chr4 (22-78)||(11931355-11931411)
chr4 (24-72)||(17425348-17425396)
chr4 (27-87)||(27706110-27706170)
chr4 (24-72)||(40965341-40965389)
chr4 (21-89)||(47264050-47264118)
chr4 (24-59)||(4383449-4383484)
chr4 (24-71)||(5922532-5922579)
chr4 (40-94)||(10133756-10133811)
chr4 (23-94)||(19500787-19500858)
chr4 (22-61)||(28470446-28470485)
chr4 (23-62)||(30299009-30299048)
chr4 (23-62)||(30327877-30327916)
chr4 (25-123)||(482185-482278)
chr4 (23-77)||(941310-941364)
chr4 (21-94)||(3144585-3144658)
chr4 (23-122)||(7214466-7214561)
chr4 (24-94)||(12323968-12324038)
chr4 (23-73)||(12884347-12884397)
chr4 (76-114)||(20950420-20950458)
chr4 (138-184)||(27706240-27706286)
chr4 (23-73)||(39507059-39507109)
chr4 (138-187)||(847898-847947)
chr4 (85-130)||(6485613-6485658)
chr4 (45-122)||(8402705-8402781)
chr4 (61-122)||(13307897-13307958)
chr4 (24-73)||(18575984-18576033)
chr4 (25-94)||(34589645-34589714)
chr4 (23-87)||(5654503-5654567)
chr4 (21-57)||(10499225-10499261)
chr4 (23-71)||(12708213-12708261)
chr4 (78-122)||(13117449-13117493)
chr4 (83-119)||(13783304-13783340)
chr4 (78-122)||(16189729-16189773)
chr4 (23-59)||(18844423-18844459)
chr4 (39-94)||(20521801-20521857)
chr4 (27-94)||(20743210-20743278)
chr4 (138-190)||(24613774-24613826)
chr4 (83-123)||(30298966-30299006)
chr4 (83-123)||(30327834-30327874)
chr4 (19-71)||(34515807-34515858)
chr4 (91-190)||(37203222-37203315)
[»] chr6 (94 HSPs)
chr6 (23-181)||(28715256-28715414)
chr6 (21-130)||(34595146-34595255)
chr6 (23-195)||(8776908-8777093)
chr6 (23-123)||(28152117-28152217)
chr6 (21-190)||(9107297-9107485)
chr6 (24-142)||(17841530-17841648)
chr6 (22-189)||(7377930-7378099)
chr6 (23-189)||(16766642-16766827)
chr6 (23-142)||(1191643-1191759)
chr6 (23-147)||(4877937-4878061)
chr6 (26-123)||(32978842-32978939)
chr6 (21-190)||(5970035-5970217)
chr6 (23-123)||(24645500-24645600)
chr6 (23-130)||(6898221-6898328)
chr6 (23-130)||(16833320-16833427)
chr6 (25-122)||(7265535-7265632)
chr6 (25-188)||(12696277-12696446)
chr6 (23-142)||(7977770-7977889)
chr6 (23-94)||(8365448-8365519)
chr6 (24-122)||(9658899-9658998)
chr6 (23-94)||(10339054-10339125)
chr6 (23-130)||(33001229-33001336)
chr6 (23-88)||(17327590-17327655)
chr6 (24-130)||(31384932-31385048)
chr6 (98-195)||(34225824-34225921)
chr6 (18-122)||(13360308-13360411)
chr6 (23-130)||(10770607-10770721)
chr6 (28-123)||(12627522-12627617)
chr6 (50-144)||(7740639-7740733)
chr6 (21-190)||(8713929-8714112)
chr6 (22-94)||(3209447-3209519)
chr6 (24-140)||(31959161-31959268)
chr6 (35-130)||(853811-853906)
chr6 (23-94)||(7248417-7248488)
chr6 (78-190)||(7938060-7938180)
chr6 (26-151)||(9025448-9025562)
chr6 (139-190)||(10294051-10294102)
chr6 (23-122)||(13364645-13364744)
chr6 (23-122)||(32511606-32511705)
chr6 (23-190)||(12868616-12868784)
chr6 (23-190)||(18367781-18367966)
chr6 (43-124)||(29020930-29021011)
chr6 (77-190)||(426508-426629)
chr6 (23-190)||(9027122-9027286)
chr6 (26-72)||(8389411-8389457)
chr6 (20-122)||(26178615-26178720)
chr6 (23-72)||(7938170-7938219)
chr6 (77-156)||(403858-403936)
chr6 (36-142)||(3398619-3398729)
chr6 (26-122)||(7996325-7996417)
chr6 (26-122)||(8022384-8022476)
chr6 (23-94)||(16488519-16488590)
chr6 (75-122)||(19040372-19040419)
chr6 (35-110)||(23771610-23771685)
chr6 (35-105)||(1315969-1316039)
chr6 (21-75)||(7625183-7625237)
chr6 (45-95)||(9522949-9522999)
chr6 (35-112)||(16388175-16388246)
chr6 (36-130)||(7930317-7930407)
chr6 (23-88)||(9629448-9629513)
chr6 (45-94)||(21223717-21223766)
chr6 (83-123)||(7027261-7027301)
chr6 (82-130)||(7801155-7801203)
chr6 (23-123)||(13789173-13789273)
chr6 (23-123)||(13797792-13797892)
chr6 (68-112)||(30851630-30851674)
chr6 (75-122)||(31579219-31579264)
chr6 (23-63)||(32839571-32839611)
chr6 (79-190)||(33817901-33818015)
chr6 (42-102)||(34172233-34172288)
chr6 (23-94)||(34446618-34446690)
chr6 (23-94)||(10294166-10294237)
chr6 (83-122)||(16488590-16488629)
chr6 (24-71)||(24807115-24807162)
chr6 (76-123)||(26402673-26402720)
chr6 (23-57)||(7723199-7723233)
chr6 (83-121)||(9911528-9911566)
chr6 (21-63)||(10842612-10842654)
chr6 (23-93)||(17435259-17435329)
chr6 (78-112)||(21924930-21924964)
chr6 (78-123)||(1700371-1700416)
chr6 (77-122)||(5732504-5732549)
chr6 (23-60)||(8805524-8805561)
chr6 (26-122)||(12235462-12235558)
chr6 (39-72)||(21924907-21924940)
chr6 (23-68)||(34073278-34073323)
chr6 (23-59)||(426478-426514)
chr6 (23-59)||(5732474-5732510)
chr6 (82-122)||(9629403-9629443)
chr6 (23-59)||(10649371-10649407)
chr6 (36-72)||(25207810-25207846)
chr6 (144-184)||(31673555-31673595)
chr6 (23-87)||(33818023-33818087)
chr6 (23-71)||(34894968-34895016)
[»] chr2 (88 HSPs)
chr2 (25-190)||(2438661-2438831)
chr2 (22-142)||(37558977-37559097)
chr2 (23-175)||(38117099-38117253)
chr2 (23-144)||(18840953-18841074)
chr2 (23-130)||(15972885-15972992)
chr2 (23-136)||(37419749-37419873)
chr2 (24-189)||(44860273-44860449)
chr2 (21-190)||(26769461-26769643)
chr2 (23-122)||(20242667-20242766)
chr2 (24-119)||(28596492-28596587)
chr2 (27-122)||(37411188-37411283)
chr2 (35-123)||(5040753-5040841)
chr2 (22-122)||(24009316-24009415)
chr2 (23-130)||(30404790-30404897)
chr2 (45-121)||(5367213-5367289)
chr2 (36-123)||(12224242-12224329)
chr2 (23-94)||(35056927-35056998)
chr2 (23-93)||(27084318-27084388)
chr2 (23-112)||(34993922-34994011)
chr2 (23-88)||(42511322-42511387)
chr2 (25-93)||(19942314-19942382)
chr2 (22-144)||(11223792-11223924)
chr2 (23-94)||(30717459-30717530)
chr2 (23-121)||(41843462-41843565)
chr2 (25-130)||(15657876-15657992)
chr2 (26-92)||(17776648-17776714)
chr2 (30-112)||(21624297-21624374)
chr2 (21-94)||(34784909-34784982)
chr2 (90-190)||(21374706-21374809)
chr2 (23-190)||(18631351-18631514)
chr2 (97-191)||(1886892-1886986)
chr2 (34-123)||(14996170-14996263)
chr2 (77-123)||(19536391-19536437)
chr2 (54-150)||(1327970-1328064)
chr2 (22-94)||(22084755-22084830)
chr2 (45-122)||(31808097-31808174)
chr2 (26-110)||(21091755-21091839)
chr2 (23-95)||(21782744-21782816)
chr2 (21-73)||(28412426-28412478)
chr2 (23-130)||(28677921-28678033)
chr2 (28-123)||(23058389-23058482)
chr2 (35-112)||(27460067-27460141)
chr2 (23-94)||(36096304-36096375)
chr2 (22-72)||(10535684-10535734)
chr2 (23-94)||(11307934-11308004)
chr2 (83-192)||(24975325-24975433)
chr2 (77-122)||(34691799-34691844)
chr2 (77-122)||(34714211-34714256)
chr2 (137-190)||(34785044-34785097)
chr2 (46-142)||(6940255-6940351)
chr2 (23-71)||(18622673-18622721)
chr2 (138-178)||(36756407-36756447)
chr2 (23-67)||(44635568-44635612)
chr2 (23-82)||(15907851-15907910)
chr2 (83-142)||(20539674-20539733)
chr2 (24-94)||(23354582-23354652)
chr2 (21-72)||(29367281-29367332)
chr2 (25-88)||(36756275-36756338)
chr2 (25-72)||(42832234-42832281)
chr2 (38-112)||(2415347-2415421)
chr2 (24-66)||(3444827-3444869)
chr2 (36-94)||(4207915-4207973)
chr2 (76-130)||(5473340-5473394)
chr2 (77-147)||(18255974-18256044)
chr2 (25-94)||(23354926-23354995)
chr2 (36-118)||(29176446-29176528)
chr2 (21-51)||(31018661-31018691)
chr2 (23-112)||(34006930-34007020)
chr2 (23-61)||(34221463-34221501)
chr2 (138-188)||(34337239-34337289)
chr2 (23-88)||(41849354-41849420)
chr2 (23-72)||(12748737-12748786)
chr2 (23-72)||(15909570-15909619)
chr2 (24-88)||(17651616-17651681)
chr2 (78-119)||(18421986-18422027)
chr2 (77-122)||(20922922-20922967)
chr2 (24-93)||(27286222-27286291)
chr2 (21-94)||(32749752-32749825)
chr2 (23-52)||(44770143-44770172)
chr2 (141-189)||(18276466-18276514)
chr2 (46-122)||(18570992-18571068)
chr2 (23-59)||(19536361-19536397)
chr2 (23-91)||(19580225-19580293)
chr2 (158-190)||(27447084-27447116)
chr2 (138-190)||(28412294-28412346)
chr2 (21-69)||(32321341-32321389)
chr2 (83-123)||(33153443-33153483)
chr2 (62-122)||(43585984-43586044)
[»] scaffold0053 (1 HSPs)
scaffold0053 (20-190)||(8742-8920)
[»] chr8 (91 HSPs)
chr8 (23-130)||(36450694-36450801)
chr8 (23-190)||(3951476-3951644)
chr8 (23-190)||(29510233-29510419)
chr8 (26-148)||(40332185-40332307)
chr8 (23-175)||(8342939-8343086)
chr8 (25-189)||(926730-926902)
chr8 (27-142)||(5813592-5813707)
chr8 (24-190)||(43737752-43737928)
chr8 (23-192)||(22651918-22652106)
chr8 (25-161)||(3025532-3025668)
chr8 (23-190)||(16641909-16642081)
chr8 (23-123)||(18407738-18407838)
chr8 (23-122)||(14134719-14134818)
chr8 (22-123)||(31557015-31557116)
chr8 (21-192)||(25566785-25566951)
chr8 (23-190)||(24413499-24413675)
chr8 (23-88)||(8343381-8343446)
chr8 (25-122)||(20679337-20679434)
chr8 (23-94)||(15816058-15816129)
chr8 (23-189)||(24857954-24858135)
chr8 (23-122)||(33405324-33405423)
chr8 (23-94)||(34450961-34451032)
chr8 (35-105)||(126299-126369)
chr8 (23-96)||(17751701-17751775)
chr8 (23-96)||(17760688-17760762)
chr8 (20-94)||(29447503-29447577)
chr8 (23-122)||(37283755-37283849)
chr8 (24-93)||(29447040-29447109)
chr8 (23-87)||(4673354-4673418)
chr8 (54-130)||(20873081-20873157)
chr8 (35-83)||(22943301-22943349)
chr8 (23-130)||(38487157-38487265)
chr8 (24-95)||(24205749-24205820)
chr8 (76-130)||(4948664-4948718)
chr8 (23-88)||(39820482-39820547)
chr8 (35-112)||(15023209-15023286)
chr8 (53-122)||(38079019-38079088)
chr8 (23-130)||(4298830-4298933)
chr8 (21-142)||(13436908-13437023)
chr8 (25-88)||(44067580-44067644)
chr8 (23-94)||(21465471-21465542)
chr8 (77-147)||(24613516-24613585)
chr8 (22-88)||(26902103-26902169)
chr8 (28-122)||(31109463-31109557)
chr8 (23-88)||(22197671-22197736)
chr8 (39-96)||(44462151-44462208)
chr8 (39-96)||(44469684-44469741)
chr8 (83-192)||(2572056-2572173)
chr8 (23-87)||(6065586-6065650)
chr8 (36-112)||(8293855-8293931)
chr8 (23-95)||(11803317-11803389)
chr8 (66-142)||(22595994-22596070)
chr8 (75-158)||(31514856-31514940)
chr8 (22-78)||(40064026-40064082)
chr8 (35-130)||(41831887-41831987)
chr8 (75-122)||(4786330-4786377)
chr8 (23-94)||(28745557-28745628)
chr8 (23-78)||(30067968-30068023)
chr8 (24-78)||(2035812-2035866)
chr8 (25-123)||(3677805-3677903)
chr8 (138-192)||(18964113-18964167)
chr8 (147-193)||(20785531-20785577)
chr8 (36-122)||(31580080-31580166)
chr8 (22-91)||(12570437-12570506)
chr8 (22-91)||(12570663-12570732)
chr8 (23-76)||(13397617-13397670)
chr8 (78-156)||(13844591-13844671)
chr8 (138-191)||(24362265-24362318)
chr8 (23-72)||(27213595-27213644)
chr8 (25-65)||(16987990-16988030)
chr8 (23-94)||(27067231-27067300)
chr8 (83-147)||(34451037-34451101)
chr8 (78-122)||(34897105-34897149)
chr8 (23-130)||(949205-949311)
chr8 (83-122)||(11927086-11927125)
chr8 (22-69)||(11944749-11944796)
chr8 (24-94)||(13009423-13009493)
chr8 (83-142)||(17468508-17468567)
chr8 (83-122)||(26902175-26902214)
chr8 (20-95)||(28819249-28819324)
chr8 (23-58)||(31514938-31514973)
chr8 (83-121)||(8847277-8847315)
chr8 (23-57)||(11833935-11833969)
chr8 (76-122)||(31236570-31236616)
chr8 (35-72)||(8798805-8798842)
chr8 (23-76)||(13403172-13403225)
chr8 (81-130)||(30077385-30077434)
chr8 (83-147)||(8343311-8343375)
chr8 (22-58)||(11927014-11927050)
chr8 (23-94)||(14513108-14513180)
chr8 (28-80)||(14639735-14639787)
[»] chr5 (91 HSPs)
chr5 (25-177)||(21190998-21191158)
chr5 (23-141)||(21576685-21576803)
chr5 (23-130)||(43564893-43565000)
chr5 (22-147)||(42893355-42893480)
chr5 (22-165)||(31084298-31084448)
chr5 (34-190)||(15382421-15382593)
chr5 (23-147)||(37328775-37328908)
chr5 (23-190)||(21522694-21522880)
chr5 (23-190)||(21533260-21533446)
chr5 (23-144)||(39698539-39698671)
chr5 (25-122)||(30502330-30502427)
chr5 (25-122)||(30542673-30542770)
chr5 (23-122)||(27932255-27932354)
chr5 (23-122)||(28588614-28588713)
chr5 (26-96)||(39268541-39268611)
chr5 (25-130)||(43001812-43001922)
chr5 (23-122)||(14873537-14873641)
chr5 (25-122)||(18421779-18421880)
chr5 (36-112)||(26312799-26312875)
chr5 (83-190)||(6471889-6471996)
chr5 (23-94)||(7677764-7677835)
chr5 (23-122)||(21194063-21194162)
chr5 (24-94)||(21542089-21542159)
chr5 (83-185)||(13287399-13287509)
chr5 (27-112)||(30098982-30099067)
chr5 (21-189)||(32766870-32767049)
chr5 (85-190)||(17177025-17177138)
chr5 (23-102)||(17123088-17123166)
chr5 (22-87)||(19820327-19820389)
chr5 (23-122)||(42029772-42029871)
chr5 (25-122)||(23015926-23016028)
chr5 (22-119)||(4105282-4105379)
chr5 (77-130)||(6247634-6247687)
chr5 (23-88)||(30098391-30098456)
chr5 (23-112)||(32630675-32630764)
chr5 (75-123)||(15884007-15884055)
chr5 (23-95)||(16304366-16304438)
chr5 (36-192)||(19579643-19579818)
chr5 (23-71)||(38464313-38464361)
chr5 (35-94)||(43554574-43554633)
chr5 (24-94)||(6401557-6401627)
chr5 (35-73)||(17088360-17088398)
chr5 (23-73)||(35017112-35017162)
chr5 (27-89)||(36642696-36642757)
chr5 (138-188)||(41995417-41995467)
chr5 (23-94)||(2419914-2419986)
chr5 (26-94)||(18592132-18592200)
chr5 (23-190)||(6770487-6770655)
chr5 (80-187)||(8419985-8420089)
chr5 (23-94)||(21814320-21814391)
chr5 (27-82)||(30183620-30183675)
chr5 (23-73)||(2436980-2437030)
chr5 (24-94)||(3966562-3966632)
chr5 (23-96)||(17393305-17393379)
chr5 (23-73)||(17593663-17593713)
chr5 (20-123)||(21351847-21351945)
chr5 (21-59)||(22423762-22423800)
chr5 (144-190)||(23016060-23016106)
chr5 (79-190)||(24906297-24906416)
chr5 (25-122)||(16203746-16203834)
chr5 (145-190)||(20683325-20683370)
chr5 (78-123)||(33178044-33178089)
chr5 (137-190)||(34276801-34276854)
chr5 (23-72)||(39695951-39695999)
chr5 (20-88)||(41558585-41558654)
chr5 (138-190)||(6326360-6326412)
chr5 (138-190)||(6401442-6401494)
chr5 (25-108)||(7997108-7997191)
chr5 (23-59)||(10298633-10298669)
chr5 (23-91)||(11686000-11686068)
chr5 (43-122)||(23221003-23221083)
chr5 (138-190)||(36642825-36642876)
chr5 (83-122)||(3966523-3966562)
chr5 (83-142)||(7677705-7677764)
chr5 (83-122)||(21814281-21814320)
chr5 (55-122)||(23012380-23012447)
chr5 (88-142)||(14674269-14674323)
chr5 (23-105)||(15086508-15086597)
chr5 (137-171)||(41558745-41558779)
chr5 (21-58)||(2548464-2548501)
chr5 (21-58)||(14674333-14674370)
chr5 (22-71)||(19552475-19552524)
chr5 (23-72)||(32444849-32444898)
chr5 (21-58)||(36838615-36838652)
chr5 (23-88)||(39205939-39206004)
chr5 (76-124)||(14422920-14422968)
chr5 (83-123)||(16374342-16374382)
chr5 (46-148)||(24272996-24273095)
chr5 (46-148)||(24389119-24389218)
chr5 (23-59)||(24906252-24906288)
chr5 (35-71)||(39342513-39342549)
[»] chr3 (98 HSPs)
chr3 (23-165)||(55401044-55401194)
chr3 (21-142)||(20503465-20503586)
chr3 (23-123)||(40993275-40993375)
chr3 (38-130)||(10954964-10955056)
chr3 (23-142)||(27505246-27505370)
chr3 (23-154)||(51206293-51206424)
chr3 (25-130)||(28918013-28918120)
chr3 (22-156)||(11251964-11252096)
chr3 (23-190)||(7171446-7171620)
chr3 (83-192)||(14027957-14028066)
chr3 (25-120)||(25775531-25775624)
chr3 (23-122)||(13845465-13845564)
chr3 (24-189)||(15999951-16000130)
chr3 (23-122)||(35222958-35223057)
chr3 (24-122)||(8789489-8789589)
chr3 (22-123)||(18426968-18427069)
chr3 (25-190)||(24204983-24205156)
chr3 (82-190)||(21479068-21479178)
chr3 (25-142)||(4987222-4987350)
chr3 (30-118)||(3631708-3631796)
chr3 (23-130)||(26492145-26492252)
chr3 (23-94)||(41961579-41961650)
chr3 (23-123)||(34185052-34185163)
chr3 (91-190)||(11313808-11313907)
chr3 (35-149)||(1509532-1509641)
chr3 (24-144)||(24633343-24633462)
chr3 (25-130)||(29508456-29508567)
chr3 (23-94)||(52369834-52369906)
chr3 (63-122)||(2941578-2941637)
chr3 (23-190)||(3163971-3164140)
chr3 (24-187)||(7614357-7614519)
chr3 (77-148)||(7928444-7928515)
chr3 (23-73)||(40052381-40052431)
chr3 (23-130)||(49651716-49651833)
chr3 (21-122)||(8842349-8842450)
chr3 (23-95)||(25074841-25074914)
chr3 (138-190)||(10335349-10335401)
chr3 (21-73)||(11610578-11610630)
chr3 (24-88)||(14216957-14217021)
chr3 (24-88)||(14223086-14223150)
chr3 (23-94)||(21211341-21211413)
chr3 (62-122)||(25093522-25093582)
chr3 (77-190)||(35994733-35994852)
chr3 (54-154)||(45451541-45451641)
chr3 (143-190)||(750687-750734)
chr3 (23-94)||(8039764-8039835)
chr3 (23-94)||(14209172-14209243)
chr3 (83-190)||(14747511-14747621)
chr3 (47-94)||(14832158-14832205)
chr3 (23-190)||(15796223-15796409)
chr3 (24-190)||(15864789-15864950)
chr3 (86-144)||(26508108-26508166)
chr3 (45-198)||(34307737-34307903)
chr3 (138-190)||(10318103-10318155)
chr3 (23-122)||(4466540-4466639)
chr3 (79-130)||(8587017-8587068)
chr3 (26-112)||(12100299-12100385)
chr3 (23-66)||(14979225-14979268)
chr3 (23-94)||(25064966-25065037)
chr3 (23-94)||(28812574-28812645)
chr3 (24-66)||(34910393-34910435)
chr3 (23-95)||(2408590-2408663)
chr3 (23-112)||(23657769-23657858)
chr3 (27-95)||(25651969-25652038)
chr3 (23-95)||(27903684-27903757)
chr3 (24-122)||(32804485-32804579)
chr3 (24-72)||(1389908-1389956)
chr3 (28-72)||(1509637-1509681)
chr3 (67-123)||(3865693-3865749)
chr3 (23-59)||(4990912-4990948)
chr3 (79-123)||(8593156-8593200)
chr3 (77-191)||(32400702-32400810)
chr3 (23-95)||(55213020-55213092)
chr3 (21-64)||(3730106-3730149)
chr3 (78-190)||(10268481-10268601)
chr3 (83-130)||(34910329-34910376)
chr3 (23-88)||(5440967-5441033)
chr3 (29-94)||(12704597-12704663)
chr3 (21-94)||(14223786-14223859)
chr3 (54-128)||(14338454-14338528)
chr3 (21-67)||(14829776-14829822)
chr3 (23-73)||(17276796-17276846)
chr3 (85-123)||(30184108-30184146)
chr3 (23-76)||(8039284-8039337)
chr3 (77-122)||(8383277-8383322)
chr3 (20-73)||(9800120-9800173)
chr3 (77-122)||(11507469-11507514)
chr3 (25-94)||(13806295-13806363)
chr3 (21-94)||(16789071-16789143)
chr3 (35-72)||(21720842-21720879)
chr3 (22-59)||(21861658-21861695)
chr3 (82-123)||(38731237-38731278)
chr3 (77-122)||(49505148-49505193)
chr3 (138-190)||(4991030-4991082)
chr3 (23-63)||(8903514-8903554)
chr3 (24-88)||(10690193-10690257)
chr3 (78-122)||(13414489-13414533)
chr3 (23-95)||(17005548-17005620)
[»] scaffold0793 (1 HSPs)
scaffold0793 (21-123)||(4819-4923)
[»] scaffold0050 (1 HSPs)
scaffold0050 (26-130)||(70290-70394)
[»] scaffold0361 (1 HSPs)
scaffold0361 (22-130)||(14542-14647)
[»] scaffold0003 (2 HSPs)
scaffold0003 (21-94)||(241653-241726)
scaffold0003 (23-74)||(236914-236965)
[»] scaffold0019 (1 HSPs)
scaffold0019 (23-94)||(71784-71855)
[»] scaffold0512 (1 HSPs)
scaffold0512 (23-105)||(4976-5058)
[»] scaffold0475 (2 HSPs)
scaffold0475 (23-114)||(3336-3427)
scaffold0475 (138-188)||(3262-3312)
[»] scaffold0083 (1 HSPs)
scaffold0083 (21-112)||(45468-45559)
[»] scaffold0450 (1 HSPs)
scaffold0450 (21-94)||(8562-8635)
[»] scaffold0004 (3 HSPs)
scaffold0004 (24-89)||(92875-92940)
scaffold0004 (83-179)||(83122-83219)
scaffold0004 (84-120)||(123650-123686)
[»] scaffold0136 (1 HSPs)
scaffold0136 (23-94)||(3778-3849)
[»] scaffold0086 (1 HSPs)
scaffold0086 (23-94)||(2987-3058)
[»] scaffold0380 (1 HSPs)
scaffold0380 (23-105)||(8638-8720)
[»] scaffold0027 (2 HSPs)
scaffold0027 (83-190)||(46626-46741)
scaffold0027 (23-58)||(46741-46776)
[»] scaffold0103 (1 HSPs)
scaffold0103 (24-142)||(51811-51941)
[»] scaffold0007 (2 HSPs)
scaffold0007 (25-88)||(225199-225263)
scaffold0007 (138-193)||(225331-225386)
[»] scaffold0154 (1 HSPs)
scaffold0154 (23-94)||(13472-13543)
[»] scaffold0022 (1 HSPs)
scaffold0022 (23-122)||(90863-90962)
[»] scaffold0021 (1 HSPs)
scaffold0021 (86-190)||(130426-130538)
[»] scaffold0306 (1 HSPs)
scaffold0306 (25-94)||(13454-13523)
[»] scaffold0152 (1 HSPs)
scaffold0152 (25-94)||(21804-21873)
[»] scaffold0009 (3 HSPs)
scaffold0009 (22-123)||(174492-174593)
scaffold0009 (22-123)||(180005-180106)
scaffold0009 (30-69)||(188473-188512)
[»] scaffold0008 (2 HSPs)
scaffold0008 (25-94)||(263303-263372)
scaffold0008 (139-178)||(263436-263475)
[»] scaffold0246 (1 HSPs)
scaffold0246 (40-123)||(19594-19682)
[»] scaffold0128 (1 HSPs)
scaffold0128 (24-72)||(32774-32822)
[»] scaffold0116 (1 HSPs)
scaffold0116 (138-190)||(9842-9894)
[»] scaffold0044 (1 HSPs)
scaffold0044 (30-94)||(53239-53303)
[»] scaffold0722 (1 HSPs)
scaffold0722 (43-142)||(6992-7091)
[»] scaffold0223 (1 HSPs)
scaffold0223 (83-142)||(20172-20231)
[»] scaffold0057 (1 HSPs)
scaffold0057 (23-94)||(24083-24155)
[»] scaffold0123 (2 HSPs)
scaffold0123 (21-94)||(44452-44525)
scaffold0123 (87-144)||(44529-44586)
[»] scaffold0122 (1 HSPs)
scaffold0122 (75-189)||(7961-8076)
[»] scaffold0036 (1 HSPs)
scaffold0036 (25-94)||(9678-9747)
[»] scaffold0025 (1 HSPs)
scaffold0025 (83-123)||(23789-23829)
[»] scaffold0011 (2 HSPs)
scaffold0011 (84-144)||(17750-17810)
scaffold0011 (21-71)||(17540-17590)
[»] scaffold0623 (1 HSPs)
scaffold0623 (83-122)||(5996-6035)
[»] scaffold0049 (1 HSPs)
scaffold0049 (155-190)||(63709-63744)
[»] scaffold0020 (1 HSPs)
scaffold0020 (23-147)||(135263-135376)
[»] scaffold0227 (1 HSPs)
scaffold0227 (21-66)||(15047-15092)
[»] scaffold0171 (2 HSPs)
scaffold0171 (83-123)||(23439-23479)
scaffold0171 (23-91)||(23573-23641)


Alignment Details
Target: chr7 (Bit Score: 103; Significance: 2e-51; HSPs: 93)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 23 - 192
Target Start/End: Complemental strand, 9778624 - 9778450
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacac-----cgacacatgtaattacactgaattttgtg 117  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||||||| || |||||||||||     |||||| |||||||| |||||||| ||||    
T  9778624 ctatgaagcacggacactccttggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacacgacaccgacacttgtaattatactgaattatgtg 9778525  T
Q  118 atttttacaaattctttgctgtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatagct 192  Q
    |||||| |||||| |  |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  9778524 attttttcaaattatcagctgtgtcagtgtccgtgtcgtgtccggtgtccgtgtccgtatccgtgcttcatagct 9778450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 23 - 190
Target Start/End: Original strand, 5409771 - 5409951
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtc-----cgacaccgacacatgtaattacactgaattttgtg 117  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||     |||||||||||| ||||||| ||||||||| ||||    
T  5409771 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacacgacaccgacacttgtaattgcactgaattatgtg 5409870  T
Q  118 atttttacaaattctttgct--------gtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    |||||| |||||| || |||        |||||||||||| |||||||||||||||  ||||| |||||||||||||||||    
T  5409871 attttttcaaattattagctgtatcagcgtgtcagtgtccatgtcgtatccggtgtctgtgtctgtatccgtgcttcatag 5409951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 22 - 122
Target Start/End: Complemental strand, 21880272 - 21880172
Alignment:
Q  22 tctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgattt 121  Q
    |||||||||||| |||||| |||||||||||||||||| ||||||||||| | |||||||||||||||||||| ||||||||||||||||| ||| ||||    
T  21880272 tctatgaagcacggacacttctcggattaggcgtgtcctggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtaattt 21880173  T
Q  122 t 122  Q
    |    
T  21880172 t 21880172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 23 - 123
Target Start/End: Complemental strand, 15680928 - 15680828
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||||| ||||||||||| ||||| |||||| |||||||||||||| |||||||||||||||||||| | |||||||||| |||| |||||||||    
T  15680928 ctatgaagcacggacactcctcgaattagacgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttataattacactaaattatgtgatttt 15680829  T
Q  123 t 123  Q
    |    
T  15680828 t 15680828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 23 - 123
Target Start/End: Complemental strand, 21864927 - 21864827
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||||| ||||||||||| ||||| ||||||||||||||||||||| ||||||||||||| |||||| |||||||||||| |||| | |||||||    
T  21864927 ctatgaagcacagacactcctcgaattagacgtgtcccggtgtcggacacgtgtcgtgtccgacagcgacacttgtaattacactaaattatatgatttt 21864828  T
Q  123 t 123  Q
    |    
T  21864827 t 21864827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 32287404 - 32287502
Alignment:
Q  24 tatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||  ||| |||||||||||||||||| || || ||||||||| |||||||||    
T  32287404 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacttgtcatgtccgacaccgacacatatacttgcactgaattatgtgatttt 32287502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 43027404 - 43027516
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtc-----cgacaccgacacatgtaattacactgaattttgtg 117  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||     |||||||||||| |||| |||||||| ||| ||||    
T  43027404 ctatgaagcacggacactcatcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacacgacaccgacacttgtatttacactgcattatgtg 43027503  T
Q  118 atttttacaaatt 130  Q
    |||||| ||||||    
T  43027504 attttttcaaatt 43027516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 190
Target Start/End: Original strand, 18212973 - 18213149
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||||| |||||||||||||| ||||||||||| ||||| || | | |||||||||||||||||||||| |||||||||| |||| |||||||||    
T  18212973 ctatgaagcacagacactcctcggataaggcgtgtccccgtgtcagaaaggggtcgtgtccgacaccgacacatataattacactaaattatgtgatttt 18213072  T
Q  123 -tacaaattctttgctgtgtc--------agtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
     || |||   || | ||||||        |||||||||||||| || ||||||||||| |||||| |||||||||||    
T  18213073 ctaaaaaaaattagttgtgtcggcgtatcagtgtccgtgtcgtgtctggtgttcgtgttcgtatctgtgcttcatag 18213149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 21 - 142
Target Start/End: Complemental strand, 24339774 - 24339642
Alignment:
Q  21 atctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccg-----------acacatgtaattacactga 109  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||           |||| ||||||||||||||    
T  24339774 atctatgaagcacgggcactcctcggattaggcgtgtcccggtgtcggatacgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactga 24339675  T
Q  110 attttgtgatttttacaaattctttgctgtgtc 142  Q
    ||| |||||||||| |||||| || ||||||||    
T  24339674 attatgtgattttttcaaattattagctgtgtc 24339642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 45 - 190
Target Start/End: Complemental strand, 8234243 - 8234096
Alignment:
Q  45 ggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttttacaaattctttgctgtgtc-- 142  Q
    |||||||||||||| |||||||||||| | |||||||||||||||| ||| ||||| ||||||||||| ||| |||||| |||||| || | ||||||      
T  8234243 ggattaggcgtgtctcggtgtcggacatgtgtcgtgtccgacaccggcacttgtaactacactgaattatgttattttttcaaattattagttgtgtcgg 8234144  T
Q  143 agtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
     ||||| ||||||  |||| ||||||||||| ||| ||| ||||||||    
T  8234143 tgtgtctgtgtcgggtccgatgttcgtgtccatattcgtacttcatag 8234096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 23 - 190
Target Start/End: Complemental strand, 24105797 - 24105629
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||||||  ||||||||||| |||||||||||||||||||||||||  || ||| ||||| ||||||| ||||||||||||||||  ||  |||||    
T  24105797 ctatgaagcacaaacactcctcgggttaggcgtgtcccggtgtcggacacatgttgtgcccgactccgacacttgtaattacactgaatcatgcaatttt 24105698  T
Q  123 tacaaattctttgctgtgtc--agtgtccgtgt-cgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    | |||||| || ||||||||   ||||| |||| ||| ||  |||| ||| ||||||||||||||||||||    
T  24105697 ttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc--gtgtccgtatccgtatccgtgcttcatag 24105629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 598327 - 598256
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  598327 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacac 598256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 24 - 147
Target Start/End: Complemental strand, 20549909 - 20549786
Alignment:
Q  24 tatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgattttt 123  Q
    |||||||||| | |||||||||||||||||||||| |  ||||||||| | || ||||||||||||||||||| |||||||||||||||  ||||||||     
T  20549909 tatgaagcacgggcactcctcggattaggcgtgtctcattgtcggacatgtgttgtgtccgacaccgacacatataattacactgaattacgtgattttc 20549810  T
Q  124 acaaattctttgctgtgtcagtgt 147  Q
     |||||| || || ||||| ||||    
T  20549809 tcaaattattagcggtgtcggtgt 20549786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 35 - 122
Target Start/End: Complemental strand, 26733411 - 26733324
Alignment:
Q  35 gacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||| ||||||||||||||||| || || ||||||| |||||||||||||||||||||||| |||||| |||||||| |||||||||    
T  26733411 gacacccctcggattaggcgtgttcccgtatcggacatgcgtcgtgtccgacaccgacacatttaattagactgaattatgtgatttt 26733324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 28 - 190
Target Start/End: Complemental strand, 13770810 - 13770635
Alignment:
Q  28 aagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacac-----cgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||| ||||||| ||||||||||||||| ||||||||||||||| || |||||||||||     |||||| ||||||||||||||||| ||| |||||    
T  13770810 aagcacggacactcttcggattaggcgtgttccggtgtcggacacgtgttgtgtccgacacgacaacgacacttgtaattacactgaattatgtaatttt 13770711  T
Q  123 tacaaattctttgctgtg--------tcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    |  ||||| || ||||||        |||||||||||||||| |||| ||| || |||| |||||||| |||||||    
T  13770710 tttaaattattagctgtgtcggcgtatcagtgtccgtgtcgtgtccgatgtccgagtccatatccgtgtttcatag 13770635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 23 - 123
Target Start/End: Original strand, 32093954 - 32094060
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtccc-ggtgtcggacacgcgtcgtgtccgac-----accgacacatgtaattacactgaattttgt 116  Q
    |||||||||||  ||||||||||||||||||||||||| ||||||||||||| ||||||||||||     |||||||  ||||||||||||||||| |||    
T  32093954 ctatgaagcacgaacactcctcggattaggcgtgtccccggtgtcggacacgtgtcgtgtccgacacgacaccgacatttgtaattacactgaattatgt 32094053  T
Q  117 gattttt 123  Q
    |||||||    
T  32094054 gattttt 32094060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 77 - 188
Target Start/End: Original strand, 11061070 - 11061189
Alignment:
Q  77 cgtgtccgacaccgacacatgtaattacactgaattttgtgatttttacaaattctttgctgtg--------tcagtgtccgtgtcgtatccggtgttcg 168  Q
    |||||| ||||||||||| |||||||| ||| |||| |||||||||| |||||| || ||||||        ||||||||||||||||||||| ||| ||    
T  11061070 cgtgtctgacaccgacacttgtaattatactaaattatgtgattttttcaaattattagctgtgtcggtgtgtcagtgtccgtgtcgtatccgatgtccg 11061169  T
Q  169 tgtccgtatccgtgcttcat 188  Q
    ||||||||||||||||||||    
T  11061170 tgtccgtatccgtgcttcat 11061189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 118
Target Start/End: Complemental strand, 33994331 - 33994236
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtga 118  Q
    ||||||| |||  |||||||| |||||||||||||| |||||| ||||| | |||||||| ||||||||||| ||||||| ||||||||| |||||    
T  33994331 ctatgaaacacgaacactccttggattaggcgtgtctcggtgttggacatgtgtcgtgtctgacaccgacacttgtaattgcactgaattatgtga 33994236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 20 - 142
Target Start/End: Complemental strand, 25482024 - 25481902
Alignment:
Q  20 gatctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgat 119  Q
    |||||||||||||| || |||| | | |||| ||||||  |  ||||||||||   |||||||||||||| |||| ||||||||||||||||| ||||||    
T  25482024 gatctatgaagcacggatactctttgaattaagcgtgtttcaatgtcggacacatatcgtgtccgacaccaacacttgtaattacactgaattatgtgat 25481925  T
Q  120 ttttacaaattctttgctgtgtc 142  Q
    |||| |||||| || ||||||||    
T  25481924 tttttcaaattattagctgtgtc 25481902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 25 - 154
Target Start/End: Original strand, 26033392 - 26033532
Alignment:
Q  25 atgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacaca-----------tgtaattacactgaattt 113  Q
    ||||| ||| |||||||||||||||||| ||||| |||| ||||||||| ||| |||| |||||||||||            |||||||||||||||||     
T  26033392 atgaaacacggacactcctcggattaggtgtgtcgcggtatcggacacgtgtcatgtctgacaccgacacgagaccgacacttgtaattacactgaatta 26033491  T
Q  114 tgtgatttttacaaattctttgctgtgtcagtgtccgtgtc 154  Q
    |||||||||| |||||| || |||| |||||||||||||||    
T  26033492 tgtgattttttcaaattattagctgcgtcagtgtccgtgtc 26033532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 7133212 - 7133285
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtc-gtgtccgacaccgacaca 95  Q
    ||||||||||| ||| |||||| ||||||| ||||||| |||||||||||||||| ||||||||||||||||||    
T  7133212 ctatgaagcacggacgctcctcagattaggtgtgtcccagtgtcggacacgcgtcggtgtccgacaccgacaca 7133285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 35 - 122
Target Start/End: Complemental strand, 12278942 - 12278855
Alignment:
Q  35 gacactcctcggattaggcgtgtcccggtgtcggacacgcg-tcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||| |||||||| ||||||||||||| |||||||| | |||||||||| |||||||| ||||||||||||||| ||| |||||    
T  12278942 gacactcctaggattaggtgtgtcccggtgtcagacacgcgttggtgtccgaca-cgacacatataattacactgaattatgtcatttt 12278855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 27 - 111
Target Start/End: Original strand, 40287306 - 40287385
Alignment:
Q  27 gaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaat 111  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||      |||||||| |||||||| ||||||||||||||||    
T  40287306 gaagcacggacactcctcggattaggcatgtcccggtgtcggaca-----tgtgtccgataccgacacttgtaattacactgaat 40287385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 23 - 190
Target Start/End: Complemental strand, 1433578 - 1433398
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtc-----cgacaccgacacatgtaattacactgaattttgtg 117  Q
    ||||||||||| ||||||||||||||||| ||||||| ||||||||||||  ||| ||||     |||||||||||||| |||||||||  |||  ||||    
T  1433578 ctatgaagcacggacactcctcggattagacgtgtcctggtgtcggacacatgtcttgtccgacacgacaccgacacatataattacaccaaatgatgtg 1433479  T
Q  118 atttttacaaattct--------ttgctgtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    |||||  |||||| |        | |  |||||| |||||||||||| | |||||| |||| |||||||||||||||||||    
T  1433478 attttctcaaattattaacggtgtcggcgtgtcaatgtccgtgtcgtgttcggtgtccgtgcccgtatccgtgcttcatag 1433398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 75 - 154
Target Start/End: Complemental strand, 19213870 - 19213791
Alignment:
Q  75 gtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttttacaaattctttgctgtgtcagtgtccgtgtc 154  Q
    |||||||||||||||||||| |||| |||||||| ||| ||||||||||  ||||| || || |||||||||||||||||    
T  19213870 gtcgtgtccgacaccgacacttgtatttacactgcattatgtgattttttaaaattattagcagtgtcagtgtccgtgtc 19213791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 122
Target Start/End: Complemental strand, 5835353 - 5835267
Alignment:
Q  36 acactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||| ||||||||| |||||||||||| || |||||  ||| |||| ||||||||||||| ||||||||||||||| ||| |||||    
T  5835353 acacttctcggattaagcgtgtcccggtatcagacacatgtcatgtctgacaccgacacatataattacactgaattatgttatttt 5835267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 142
Target Start/End: Original strand, 7197238 - 7197356
Alignment:
Q  24 tatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgattttt 123  Q
    |||||||||| |||| | |||||| || | || ||||||||||||||| | || ||||||||||||||||| |||||||||| ||||||   ||||||||    
T  7197238 tatgaagcacggacatttctcggaataagagtatcccggtgtcggacatgtgttgtgtccgacaccgacacttgtaattacattgaattaaatgattttt 7197337  T
Q  124 acaaattctttgctgtgtc 142  Q
      ||||| || ||||||||    
T  7197338 ttaaattattagctgtgtc 7197356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 122
Target Start/End: Original strand, 21568559 - 21568661
Alignment:
Q  21 atctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcg-tcgtgtccgacaccgacacatgtaattacactgaattttgtgat 119  Q
    ||||||||||||| |||||||||| ||||| || |||||||||||| |||||||| | || |||||||||||| ||| | |||||||| |||| || |||    
T  21568559 atctatgaagcacagacactcctcagattaagcatgtcccggtgtccgacacgcgttggtatccgacaccgactcatatgattacacttaattatgagat 21568658  T
Q  120 ttt 122  Q
    |||    
T  21568659 ttt 21568661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 29763129 - 29763187
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgt 81  Q
    ||||||||||| ||||||||||||||||||||||||| | ||||||||||| |||||||    
T  29763129 ctatgaagcacggacactcctcggattaggcgtgtcctgatgtcggacacgtgtcgtgt 29763187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 72
Target Start/End: Complemental strand, 6490835 - 6490786
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacac 72  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  6490835 ctatgaagcacggacactcctcggattaagcgtgtcccggtgtcggacac 6490786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 38804488 - 38804561
Alignment:
Q  22 tctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtc-gtgtccgacaccgacac 94  Q
    ||||||||||||  |||||||||||||||||| |||||||| ||||||||| |||| |||||||||||| ||||    
T  38804488 tctatgaagcacatacactcctcggattaggcatgtcccggcgtcggacacacgtcggtgtccgacaccaacac 38804561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 118
Target Start/End: Complemental strand, 1401142 - 1401049
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtga 118  Q
    ||||||||||  |||||||||| ||||||| |||||||| ||||||||| |  ||||||| |||||||| || | ||||||||||||||| |||||    
T  1401142 ctatgaagcatggacactcctcagattaggtgtgtcccgatgtcggacatg--tcgtgtcggacaccgatacttataattacactgaattatgtga 1401049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 122
Target Start/End: Complemental strand, 39138560 - 39138464
Alignment:
Q  26 tgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||| || |||| | |||| ||||||||||| ||||  |||| |  |||||||||||||||||| || ||||||||||||||| |||||||||    
T  39138560 tgaagcacagatactcttgggataaggcgtgtccccgtgttagacatgtatcgtgtccgacaccgacatatataattacactgaattatgtgatttt 39138464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 86
Target Start/End: Complemental strand, 17852119 - 17852056
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgac 86  Q
    ||||||||||| ||||||||||| |||||| ||||| |||||||||||||| ||| ||||||||    
T  17852119 ctatgaagcacggacactcctcgaattaggtgtgtctcggtgtcggacacgtgtcatgtccgac 17852056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 35 - 122
Target Start/End: Original strand, 27093365 - 27093452
Alignment:
Q  35 gacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||| |||||||||| ||||||  |||||||||||  ||||||||  |||||||| ||| |||||||||| |||| |||||||||    
T  27093365 gacactcatcggattaggtgtgtcctagtgtcggacacatgtcgtgtctaacaccgacgcatataattacactaaattatgtgatttt 27093452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 35 - 122
Target Start/End: Complemental strand, 27184936 - 27184849
Alignment:
Q  35 gacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||| |||||||||| ||||||  |||||||||||  ||||||||  |||||||| ||| |||||||||| |||| |||||||||    
T  27184936 gacactcatcggattaggtgtgtcctagtgtcggacacatgtcgtgtctaacaccgacgcatataattacactaaattatgtgatttt 27184849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 28 - 86
Target Start/End: Complemental strand, 43250118 - 43250059
Alignment:
Q  28 aagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtc-gtgtccgac 86  Q
    |||||| ||||||||||| ||||||||||||| ||||||||||||||||| |||||||||    
T  43250118 aagcacggacactcctcgaattaggcgtgtcctggtgtcggacacgcgtcagtgtccgac 43250059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 190
Target Start/End: Complemental strand, 13300468 - 13300362
Alignment:
Q  84 gacaccgacacatgtaattacactgaattttgtgatttttacaaattctttgctgtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgc 183  Q
    |||||||| ||  |||||||||||||||| | |||||||| |||||| || | | ||||||| |||||||||| | |||||| ||||| | ||||| |||    
T  13300468 gacaccgagactggtaattacactgaattatatgattttttcaaattattagttatgtcagtatccgtgtcgtgttcggtgtccgtgttcatatccctgc 13300369  T
Q  184 ttcatag 190  Q
    |||||||    
T  13300368 ttcatag 13300362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 73
Target Start/End: Complemental strand, 14729822 - 14729772
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacg 73  Q
    |||||||| || |||||||||||||||| ||||||||||||||||||||||    
T  14729822 ctatgaagtacggacactcctcggattaagcgtgtcccggtgtcggacacg 14729772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 73
Target Start/End: Original strand, 40131939 - 40131989
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacg 73  Q
    ||||||||||| ||||||||||||||||| |||||||| ||||||||||||    
T  40131939 ctatgaagcacagacactcctcggattagacgtgtccctgtgtcggacacg 40131989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 121
Target Start/End: Original strand, 18035806 - 18035902
Alignment:
Q  24 tatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgattt 121  Q
    |||||||||| ||||||||||||||||| ||||| || ||||| |||| | ||| | ||  |||| ||||||||||||||| ||||||| ||||||||    
T  18035806 tatgaagcacggacactcctcggattagacgtgttcc-gtgtcagacatgtgtcctatctcacactgacacatgtaattacgctgaattatgtgattt 18035902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 185
Target Start/End: Original strand, 42720830 - 42720994
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||||||  |||||  ||| ||||| ||||| ||||||| | ||||  || ||||| ||||| ||||||| |||||||| | |||| |||||||||    
T  42720830 ctatgaagcacaaacacttatcgaattagacgtgttccggtgttgtacacatgttgtgtcagacactgacacatataattacatttaattatgtgatttt 42720929  T
Q  123 tacaaattctttgctgtgtca--gtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgctt 185  Q
    | |||||| || || ||||||  ||||| ||||| | || | |||  ||||||||||||||||||    
T  42720930 ttcaaattattagcggtgtcaacgtgtcagtgtcatgtctgatgtctgtgtccgtatccgtgctt 42720994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 108
Target Start/End: Complemental strand, 10359717 - 10359633
Alignment:
Q  24 tatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactg 108  Q
    |||||||||| |||||   ||||||||| |||||| |||||||||||||  ||||| ||||||| |||||| | |||||||||||    
T  10359717 tatgaagcacggacacctttcggattagacgtgtctcggtgtcggacacaagtcgtatccgacatcgacacctataattacactg 10359633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 112
Target Start/End: Complemental strand, 22484143 - 22484055
Alignment:
Q  24 tatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaatt 112  Q
    |||||||||| |||||| ||||||| || | |||| || ||||||||| | ||| |||| ||||||||||||| |||||| ||||||||    
T  22484143 tatgaagcacggacacttctcggatcagacatgtctcgatgtcggacatgtgtcatgtctgacaccgacacatataattatactgaatt 22484055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 23752020 - 23751953
Alignment:
Q  21 atctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtc-gtgtccgacac 88  Q
    ||||||||||||| ||||||  |||||||||||||||||| ||||| |||||||||| |||||||||||    
T  23752020 atctatgaagcacagacacttatcggattaggcgtgtccc-gtgtctgacacgcgtcggtgtccgacac 23751953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 122
Target Start/End: Complemental strand, 9483001 - 9482954
Alignment:
Q  75 gtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||| ||||||||||||||||| ||||||||||||||| |||||||||    
T  9483001 gtcgcgtccgacaccgacacatataattacactgaattgtgtgatttt 9482954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 73
Target Start/End: Original strand, 18215144 - 18215187
Alignment:
Q  30 gcactgacactcctcggattaggcgtgtcccggtgtcggacacg 73  Q
    |||| |||||||||| ||||||||||||||||||||||||||||    
T  18215144 gcacggacactcctcagattaggcgtgtcccggtgtcggacacg 18215187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 122
Target Start/End: Complemental strand, 23192002 - 23191916
Alignment:
Q  35 gacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||||| |||||  |||||||| |||| ||||||| | |||||| ||||| || |||||||||||||||||| | |||||||||    
T  23192002 gacactcctccgattaaacgtgtccctgtgttggacacgtg-cgtgtctgacactgaaacatgtaattacactgaaatatgtgatttt 23191916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 190
Target Start/End: Complemental strand, 25822785 - 25822605
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccga-----------caccgacacatgtaattacactgaat 111  Q
    ||||||| ||| |||||||||  |||||||| ||||||| |||| |||||| |||||||||||           ||||||||| ||||||||||||||||    
T  25822785 ctatgaaacacggacactccttagattaggcatgtcccgatgtcagacacgtgtcgtgtccgataccgatacgacaccgacacttgtaattacactgaat 25822686  T
Q  112 tttgtgatttttacaaattctttgctgtgtc--agtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    | ||   ||||| |||||| || | ||||||   |||||  ||||||||||||||| | |||| ||||||||| |||||||    
T  25822685 tgtgattttttttcaaattattagttgtgtcggcgtgtctatgtcgtatccggtgtccatgtctgtatccgtgtttcatag 25822605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 30813916 - 30813865
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgc 74  Q
    ||||||||||| ||||||||||||||||||||||| | | ||||||||||||    
T  30813916 ctatgaagcacggacactcctcggattaggcgtgttctgatgtcggacacgc 30813865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 190
Target Start/End: Original strand, 9408410 - 9408456
Alignment:
Q  144 gtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    ||||||||||||||| |||||| |||||||||||||||| |||||||    
T  9408410 gtgtccgtgtcgtattcggtgtccgtgtccgtatccgtgtttcatag 9408456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 129
Target Start/End: Original strand, 14077386 - 14077480
Alignment:
Q  35 gacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttttacaaat 129  Q
    |||||||||||| | |||||||||| ||||||||||| ||||||||||  || ||||||| | |||||| | | |||| ||| |||||| |||||    
T  14077386 gacactcctcggttaaggcgtgtcctggtgtcggacatgcgtcgtgtctaactccgacacttataattatattaaattatgttattttttcaaat 14077480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 129
Target Start/End: Original strand, 14387414 - 14387508
Alignment:
Q  35 gacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttttacaaat 129  Q
    |||||||||||| | |||||||||| ||||||||||| ||||||||||  || ||||||| | |||||| | | |||| ||| |||||| |||||    
T  14387414 gacactcctcggttaaggcgtgtcctggtgtcggacatgcgtcgtgtctaactccgacacttataattatattaaattatgttattttttcaaat 14387508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 94
Target Start/End: Complemental strand, 32308237 - 32308179
Alignment:
Q  36 acactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    ||||||||||||||||  ||||| |||||||||||| | ||||||||| ||||||||||    
T  32308237 acactcctcggattagctgtgtctcggtgtcggacatgtgtcgtgtccaacaccgacac 32308179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 2334379 - 2334314
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacac 88  Q
    ||||||| ||| ||||||||||||||||| |||||  | |||||||||| | ||||||||||||||    
T  2334379 ctatgaaacacggacactcctcggattagacgtgtttcagtgtcggacatgtgtcgtgtccgacac 2334314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 8842282 - 8842323
Alignment:
Q  26 tgaagcactgacactcctcggattaggcgtgtcccggtgtcg 67  Q
    |||||||| ||||||||| |||||||||||||||||||||||    
T  8842282 tgaagcacggacactccttggattaggcgtgtcccggtgtcg 8842323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 130
Target Start/End: Original strand, 11272531 - 11272635
Alignment:
Q  24 tatgaagcactgacactcctcggattaggcgtgtcccg-gtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaat--tttgtgatt 120  Q
    |||||||||| || |||||||||||||||||||||||| ||||| ||||| || |     |||||||||||| ||||||||||||||||  | |||||||    
T  11272531 tatgaagcacagatactcctcggattaggcgtgtcccgcgtgtccgacac-cgac----acgacaccgacacttgtaattacactgaattatatgtgatt 11272625  T
Q  121 tttacaaatt 130  Q
    ||| ||||||    
T  11272626 ttttcaaatt 11272635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 11665370 - 11665439
Alignment:
Q  24 tatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgaca 93  Q
    |||||||||| |||| |||||| |||||  ||||  |||||||||||||| ||||||| |||||||||||    
T  11665370 tatgaagcacggacattcctcgtattagatgtgtttcggtgtcggacacgtgtcgtgttcgacaccgaca 11665439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 11738151 - 11738240
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaatt 112  Q
    ||||||| ||| |||||||||| ||||||||||||| | |||| | |||||  || | ||||||| |||||| | |||||||||||||||    
T  11738151 ctatgaaacacggacactcctctgattaggcgtgtctcagtgtggaacacgtctcatttccgacagcgacacgtataattacactgaatt 11738240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 190
Target Start/End: Complemental strand, 1656720 - 1656628
Alignment:
Q  98 taattacactgaattttgtgatttttacaaattctttgctgtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    ||||||||||||||| ||||||||||  |||   || | |||||| ||||||||||||| |||| | | ||||||| ||||||| ||||||||    
T  1656720 taattacactgaattatgtgattttttaaaaaatttagttgtgtcggtgtccgtgtcgtgtccgatatccgtgtccatatccgtacttcatag 1656628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 147
Target Start/End: Complemental strand, 3991383 - 3991319
Alignment:
Q  83 cgacaccgacacatgtaattacactgaattttgtgatttttacaaattctttgctgtgtcagtgt 147  Q
    |||||||||||| |||||||| |||||||| |||||||||| |||||| || | |||||| ||||    
T  3991383 cgacaccgacacttgtaattatactgaattatgtgattttttcaaattattagttgtgtcggtgt 3991319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 123
Target Start/End: Complemental strand, 18039058 - 18039018
Alignment:
Q  83 cgacaccgacacatgtaattacactgaattttgtgattttt 123  Q
    |||||||||||| ||||||||||||||||| ||||||||||    
T  18039058 cgacaccgacacttgtaattacactgaattatgtgattttt 18039018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 88
Target Start/End: Original strand, 20545185 - 20545249
Alignment:
Q  24 tatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacac 88  Q
    |||||||||| ||||||||||| ||||  |||||||| |||||||||| | ||||||| ||||||    
T  20545185 tatgaagcacagacactcctcgaattaaacgtgtccccgtgtcggacatgtgtcgtgtacgacac 20545249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 123
Target Start/End: Complemental strand, 21560562 - 21560522
Alignment:
Q  83 cgacaccgacacatgtaattacactgaattttgtgattttt 123  Q
    |||||||||||| ||||||||||||||||| ||||||||||    
T  21560562 cgacaccgacacttgtaattacactgaattatgtgattttt 21560522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 35862070 - 35862034
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcc 59  Q
    ||||||||||| |||||||||||||||||||||||||    
T  35862070 ctatgaagcacggacactcctcggattaggcgtgtcc 35862034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 38134335 - 38134379
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcg 67  Q
    |||||||||||  |||||||||||||||||||||||||| |||||    
T  38134335 ctatgaagcacatacactcctcggattaggcgtgtcccgatgtcg 38134379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 3294257 - 3294300
Alignment:
Q  36 acactcctcggattaggcgtgtcccggtgtcggacacgcgtcgt 79  Q
    |||||| ||||||||||||||||||||||| ||||||| |||||    
T  3294257 acactcttcggattaggcgtgtcccggtgttggacacgtgtcgt 3294300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 130
Target Start/End: Original strand, 9408334 - 9408381
Alignment:
Q  83 cgacaccgacacatgtaattacactgaattttgtgatttttacaaatt 130  Q
    |||||||||||| |||||||||||| |||| |||||||||| ||||||    
T  9408334 cgacaccgacacttgtaattacactaaattatgtgattttttcaaatt 9408381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 122
Target Start/End: Original strand, 22602710 - 22602749
Alignment:
Q  83 cgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||||||||| ||||||||||||||| |||||||||    
T  22602710 cgacaccgacacatataattacactgaattatgtgatttt 22602749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 152
Target Start/End: Complemental strand, 25956536 - 25956437
Alignment:
Q  50 aggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttttacaaattctttgctgtgtcagtgtcc 149  Q
    |||||||||||| |||| |||| |  ||||||||||||||||||| ||| |||||| |||||| ||| ||||| |||| ||  ||  |||||||||||||    
T  25956536 aggcgtgtcccg-tgtccgacatgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcattttcacaattttatt--tgtgtcagtgtcc 25956440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 189
Target Start/End: Complemental strand, 35861954 - 35861903
Alignment:
Q  138 gtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcata 189  Q
    |||| |||||| ||||||| |||||||| || ||||||||||||||||||||    
T  35861954 gtgttagtgtctgtgtcgtgtccggtgtccgcgtccgtatccgtgcttcata 35861903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 121
Target Start/End: Complemental strand, 640180 - 640134
Alignment:
Q  75 gtcgtgtccgacaccgacacatgtaattacactgaattttgtgattt 121  Q
    ||||| || ||||||||||||| ||||||||||||||| ||||||||    
T  640180 gtcgtatctgacaccgacacatataattacactgaattatgtgattt 640134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 95
Target Start/End: Complemental strand, 5938582 - 5938524
Alignment:
Q  38 actcctcggattaggcgtgtcccggtgtcggacacgcgtc-gtgtccgacaccgacaca 95  Q
    ||||||| ||||||| |||| |||||||||||||||| || ||||| ||||||||||||    
T  5938582 actcctcagattaggtgtgttccggtgtcggacacgcatcggtgtctgacaccgacaca 5938524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 7438764 - 7438718
Alignment:
Q  84 gacaccgacacatgtaattacactgaattttgtgatttttacaaatt 130  Q
    ||||||||||| |||||||||| |||||| |||||||||| ||||||    
T  7438764 gacaccgacacttgtaattacattgaattatgtgattttttcaaatt 7438718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 7438836 - 7438766
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgaca 93  Q
    ||||||||||| ||||||||| | |||||||||||||  |||||| ||| | |||||||  ||||||||||    
T  7438836 ctatgaagcacggacactccttgaattaggcgtgtcctagtgtcgcacatgtgtcgtgtttgacaccgaca 7438766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 188
Target Start/End: Original strand, 21141053 - 21141095
Alignment:
Q  146 gtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcat 188  Q
    ||||||||||| | |||||| ||||||||||||||||||||||    
T  21141053 gtccgtgtcgtgtacggtgtccgtgtccgtatccgtgcttcat 21141095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 122
Target Start/End: Complemental strand, 22868164 - 22868062
Alignment:
Q  25 atgaagcactgacactcctcggattaggcgtgtcccggtgtcggacac-----gcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgat 119  Q
    ||||||||  |||||||||||||||| | ||||||||||||| |||||     | || ||||  || || ||||||| ||||||||||||||| ||||||    
T  22868164 atgaagcatggacactcctcggattatgtgtgtcccggtgtctgacacgtgttgtgttgtgtttgatactgacacatataattacactgaattatgtgat 22868065  T
Q  120 ttt 122  Q
    |||    
T  22868064 ttt 22868062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 28973881 - 28973919
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccg 61  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  28973881 ctatgaagcacggacacacctcggattaggcgtgtcccg 28973919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 29812598 - 29812636
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccg 61  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  29812598 ctatgaagcacggacacttctcggattaggcgtgtcccg 29812636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 123
Target Start/End: Complemental strand, 41020593 - 41020515
Alignment:
Q  45 ggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgattttt 123  Q
    ||||||| |||||||||||||  || | | ||||||| | |||||||| ||| |||||||||| |||| ||||||||||    
T  41020593 ggattagacgtgtcccggtgttagatatgtgtcgtgttcaacaccgacgcatataattacactaaattatgtgattttt 41020515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 41229237 - 41229307
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcg-tcgtgtccgacaccgac 92  Q
    ||||||||||| |||||| |||  |||||||||||| | ||| |||||||||| | |||||||||||||||    
T  41229237 ctatgaagcacggacacttctcatattaggcgtgtcgcagtgacggacacgcgttggtgtccgacaccgac 41229307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 122
Target Start/End: Complemental strand, 3721158 - 3721113
Alignment:
Q  77 cgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||||||||||||||| |||||| ||| |||| |||||||||    
T  3721158 cgtgtccgacaccgacacatataattatactaaattatgtgatttt 3721113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 3991432 - 3991395
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtccc 60  Q
    ||||||||| | ||||||||||||||||||||||||||    
T  3991432 ctatgaagcccggacactcctcggattaggcgtgtccc 3991395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 190
Target Start/End: Complemental strand, 17851428 - 17851375
Alignment:
Q  137 tgtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    |||||| || ||| |||||| |||||||| |||||| |||||||||||||||||    
T  17851428 tgtgtcggtatccatgtcgtgtccggtgtccgtgtctgtatccgtgcttcatag 17851375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 23128603 - 23128636
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtg 56  Q
    ||||||||||| ||||||||||||||||||||||    
T  23128603 ctatgaagcacagacactcctcggattaggcgtg 23128636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 72
Target Start/End: Complemental strand, 28155673 - 28155624
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacac 72  Q
    ||||||||||| |||| |||| ||||||||||||||| |||||| |||||    
T  28155673 ctatgaagcacggacattccttggattaggcgtgtcctggtgtccgacac 28155624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 72
Target Start/End: Complemental strand, 35750006 - 35749957
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacac 72  Q
    ||||||||||| |||||||||| || |||| |||||||||| ||||||||    
T  35750006 ctatgaagcacagacactcctccgactaggtgtgtcccggtttcggacac 35749957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 2533761 - 2533817
Alignment:
Q  26 tgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtc 82  Q
    ||||||||  ||||||||||||||| ||||||||||| |||||| ||| || |||||    
T  2533761 tgaagcacgaacactcctcggattacgcgtgtcccggcgtcggatacgtgttgtgtc 2533817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 154
Target Start/End: Complemental strand, 19992060 - 19991988
Alignment:
Q  83 cgacaccgacacatgtaattacactgaattttgtgatttttacaaattctttgctgtgt-cagtgtccgtgtc 154  Q
    |||||||||||| | ||||||||||||| | |||||||||  |||||| || ||||||| ||||| |||||||    
T  19992060 cgacaccgacacttataattacactgaaatatgtgattttctcaaattattagctgtgtccagtgcccgtgtc 19991988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 21138928 - 21138996
Alignment:
Q  20 gatctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacac 88  Q
    ||||||||||||||  |||||||   ||||| |||||||| |||||||||||||  || ||||||||||    
T  21138928 gatctatgaagcacgaacactcccttgattaagcgtgtcctggtgtcggacacgtatcatgtccgacac 21138996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 26329445 - 26329497
Alignment:
Q  138 gtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    ||||||||||| ||||||| ||| |||| |||||| |||| ||||||||||||    
T  26329445 gtgtcagtgtctgtgtcgtgtccagtgtccgtgtctgtattcgtgcttcatag 26329497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 122
Target Start/End: Complemental strand, 28155634 - 28155590
Alignment:
Q  78 gtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||||||||||| ||||||||||| ||||| ||| |||||    
T  28155634 gtgtccgacaccgacacttgtaattacaccgaattatgtaatttt 28155590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 48438604 - 48438560
Alignment:
Q  84 gacaccgacacatgtaattacactgaattttgtgatttttacaaa 128  Q
    ||||||||||| |||||||||| |||||| |||||||||| ||||    
T  48438604 gacaccgacacgtgtaattacattgaattatgtgattttttcaaa 48438560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 101; Significance: 3e-50; HSPs: 117)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 25 - 190
Target Start/End: Original strand, 42359391 - 42359564
Alignment:
Q  25 atgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgattttta 124  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||     
T  42359391 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacacgtcttgtccgacaccgacacttgtaattacactgaattttgtgatttttt 42359490  T
Q  125 caaattctttgct--------gtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    |||||| || | |        |||||||||||||||| || | |||||||||||||||||||||||||||||||    
T  42359491 caaattattagatgtgtcagcgtgtcagtgtccgtgttgtgtacggtgttcgtgtccgtatccgtgcttcatag 42359564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 23 - 190
Target Start/End: Original strand, 18190048 - 18190215
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||| |  ||||||||||||||||| |||||||||||||||||||| || ||||| |||| |||||| ||||||||||||||||| ||| |||||    
T  18190048 ctatgaagcgcatacactcctcggattaggtgtgtcccggtgtcggacacgtgttgtgtctgacatcgacacttgtaattacactgaattatgtaatttt 18190147  T
Q  123 tacaaattctttgctgtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    | |||||| || | ||||||||| |||||||||| |||||||| | ||||||||||| ||||||||||    
T  18190148 ttcaaattattaggtgtgtcagtatccgtgtcgtgtccggtgtccatgtccgtatccatgcttcatag 18190215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 23 - 161
Target Start/End: Complemental strand, 18337448 - 18337311
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||||| |||||||||||||| |||| |||||| |||||||||||| || ||||||||||||||||| ||||||||||||||||| |||||||||    
T  18337448 ctatgaagcacggacactcctcggatcaggcatgtcccagtgtcggacacgtgttgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 18337349  T
Q  123 tacaaattctttgctgtgtcagtgtccgtgtcgtatccg 161  Q
    | |||||| || ||  |||||||||||||||||||||||    
T  18337348 ttcaaattattggc-atgtcagtgtccgtgtcgtatccg 18337311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 22 - 192
Target Start/End: Original strand, 38078600 - 38078773
Alignment:
Q  22 tctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgattt 121  Q
    ||||||||||||  | |||||||||||||||||||||| ||||| | ||| | |||||||||||||||||||| |||||||||| |||||| ||||||||    
T  38078600 tctatgaagcacgaatactcctcggattaggcgtgtcctggtgttgaacatgtgtcgtgtccgacaccgacacttgtaattacattgaattatgtgattt 38078699  T
Q  122 ttacaaattctttgctgtgtc--agtgtccgtg-tcgtatccggtgttcgtgtccgtatccgtgcttcatagct 192  Q
    || |||||| || ||||||||   ||||| ||| |||| |||||||| ||||||||||||||||||||||||||    
T  38078700 tttcaaattattagctgtgtcgacgtgtcagtgttcgtgtccggtgtccgtgtccgtatccgtgcttcatagct 38078773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 25 - 189
Target Start/End: Original strand, 1486646 - 1486823
Alignment:
Q  25 atgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtc-----cgacaccgacacatgtaattacactgaattttgtgat 119  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||     |||||||||||| | ||||||||||||||| ||||||    
T  1486646 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacacgacaccgacacttataattacactgaattatgtgat 1486745  T
Q  120 ttttacaaattctttgct--------gtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcata 189  Q
    |||| |||||| || |||        |||||||| ||||||||||||||||| | ||||||||||||| |||||||||    
T  1486746 tttttcaaattattagctgtgtcagcgtgtcagtatccgtgtcgtatccggtatccgtgtccgtatccatgcttcata 1486823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 23 - 142
Target Start/End: Original strand, 22515827 - 22515946
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||| | | |||||||||||||||||||| |||||||||||| |||| |||||||||    
T  22515827 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggatatgtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgatttt 22515926  T
Q  123 tacaaattctttgctgtgtc 142  Q
    | |||||| || ||||||||    
T  22515927 ttcaaattattagctgtgtc 22515946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 25 - 189
Target Start/End: Original strand, 16297223 - 16297397
Alignment:
Q  25 atgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacacc---gacacatgtaattacactgaattttgtgattt 121  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||   ||||  ||||||||||||||||||||||||||    
T  16297223 atgaagcacggacactcctcggattaggcgtgtcctggtgtcggacacacgtcgtgtccgacaccccggaca-ttgtaattacactgaattttgtgattt 16297321  T
Q  122 ttacaaattctttgct--------gtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcata 189  Q
    || || ||| ||||||        |||||||| ||||| |||| |||| ||| | |||||||||||||||||||||    
T  16297322 tttcatattatttgctgtgtcgacgtgtcagtatccgtatcgtgtccgatgtccatgtccgtatccgtgcttcata 16297397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 24 - 152
Target Start/End: Original strand, 40258874 - 40259002
Alignment:
Q  24 tatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgattttt 123  Q
    |||||||||  ||||||||||||||||||||||||| ||||||||||| | |||||||| ||||||||||| ||||||||||||||||| ||||||||||    
T  40258874 tatgaagcatggacactcctcggattaggcgtgtcctggtgtcggacaggtgtcgtgtctgacaccgacacttgtaattacactgaattatgtgattttt 40258973  T
Q  124 acaaattctttgctgtgtcagtgtccgtg 152  Q
     |||||| ||   |||||| |||||||||    
T  40258974 tcaaattattaattgtgtcggtgtccgtg 40259002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 37598950 - 37598844
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||||| ||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||| | ||||||||||||| |||||||||||    
T  37598950 ctatgaagcacggacactcctcggattaggcgtgtcccattgtcggacacgtgtcgtgtccgacaccgacacttataattacactgaa-tttgtgatttt 37598852  T
Q  123 tacaaatt 130  Q
    | ||||||    
T  37598851 ttcaaatt 37598844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 23 - 142
Target Start/End: Original strand, 46348323 - 46348442
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||||| ||||| |||||||| ||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||| |||| | |||||||    
T  46348323 ctatgaagcacggacacacctcggatcaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatatgatttt 46348422  T
Q  123 tacaaattctttgctgtgtc 142  Q
    | |||||| || ||||||||    
T  46348423 ttcaaattattagctgtgtc 46348442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 24 - 191
Target Start/End: Original strand, 10577676 - 10577851
Alignment:
Q  24 tatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgattttt 123  Q
    |||||||||| ||||||||| |||| ||||||||||| ||||| ||||||||||||||||| | ||||||||| ||||||||||| |||||||||||||     
T  10577676 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgcgtcgtgtccgcccccgacacatataattacactgcattttgtgattttc 10577775  T
Q  124 acaaattctttgct--------gtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatagc 191  Q
      |||   || |||        ||||| ||||||||||||| |||||||| |||||||||||||||||||||||||    
T  10577776 taaaaaaattagctgtgtcggcgtgtcggtgtccgtgtcgtgtccggtgtccgtgtccgtatccgtgcttcatagc 10577851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 37 - 151
Target Start/End: Complemental strand, 40181976 - 40181862
Alignment:
Q  37 cactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttttacaaattctttgc 136  Q
    ||||||||||||||||||||||||||||| ||||||| || |||||||||||||| |||| ||||||||||||||| |||||||||  |||||| || ||    
T  40181976 cactcctcggattaggcgtgtcccggtgtaggacacgtgttgtgtccgacaccgatacatataattacactgaattatgtgattttctcaaattattagc 40181877  T
Q  137 tgtgtcagtgtccgt 151  Q
     ||||| ||||||||    
T  40181876 agtgtctgtgtccgt 40181862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 23 - 123
Target Start/End: Complemental strand, 1815376 - 1815276
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||| ||| | |||||||| |||||||||||||||||||||||||| | |||||||| ||||||||||| ||||||||||||||||| |||||||||    
T  1815376 ctatgaatcacggtcactcctcagattaggcgtgtcccggtgtcggacatgtgtcgtgtcggacaccgacacttgtaattacactgaattatgtgatttt 1815277  T
Q  123 t 123  Q
    |    
T  1815276 t 1815276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 23 - 123
Target Start/End: Original strand, 5898206 - 5898306
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||| |||||| ||||||||||||||||| ||||||||||||| ||||||| |||||||| ||||||||| ||| ||||||||||||||| |||||||||    
T  5898206 ctataaagcacggacactcctcggattagacgtgtcccggtgttggacacgtgtcgtgtctgacaccgacgcatataattacactgaattatgtgatttt 5898305  T
Q  123 t 123  Q
    |    
T  5898306 t 5898306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 23 - 123
Target Start/End: Complemental strand, 51410144 - 51410044
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||||||  | |||||| |||||||||||||| |||||||||| ||| |||||||||||||||||||| ||||||||||||||||| |||||||||    
T  51410144 ctatgaagcacgaatactccttggattaggcgtgtctcggtgtcggatacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 51410045  T
Q  123 t 123  Q
    |    
T  51410044 t 51410044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 23 - 190
Target Start/End: Original strand, 22881567 - 22881725
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||           |||||||||||||||| |||||||||||| |||| |||||||||    
T  22881567 ctatgaagcacggacactcctcggattagacgtgtcccggtgtcg-----------tgtccgacaccgacacttgtaattacactaaattatgtgatttt 22881655  T
Q  123 tacaaattctttgctgtgtc--agtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    | |||||| || | ||||||   ||||| ||||||| |||||||| ||||||  ||||||||||||||||    
T  22881656 ttcaaattattagttgtgtcggcgtgtcagtgtcgtgtccggtgtccgtgtctatatccgtgcttcatag 22881725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 40917879 - 40917808
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  40917879 ctatgaagcacggacagtcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacac 40917808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 17 - 122
Target Start/End: Complemental strand, 52903371 - 52903269
Alignment:
Q  17 atcgatctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgt 116  Q
    ||||||||||||||||| ||||||| ||| || || ||||||||||||||||||||    |||||||||||||||||||| ||||||||||||||| | |    
T  52903371 atcgatctatgaagcacggacactcttcgaataagccgtgtcccggtgtcggacac---acgtgtccgacaccgacacatataattacactgaattatat 52903275  T
Q  117 gatttt 122  Q
    ||||||    
T  52903274 gatttt 52903269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 9828174 - 9828103
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||| ||||| |||||    
T  9828174 ctatgaagcacggacactcctcggattagacgtgtcccggtgtcggacacgtgtcgtgtctgacacggacac 9828103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 47989627 - 47989556
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    ||||||||||| ||||||||||||||||||||||||||| |||| |||| | ||||||||||||||||||||    
T  47989627 ctatgaagcacggacactcctcggattaggcgtgtcccgatgtcagacatgtgtcgtgtccgacaccgacac 47989556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 25 - 122
Target Start/End: Original strand, 29163323 - 29163420
Alignment:
Q  25 atgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||||  ||||| ||| |||||| |||||||||||||| | |||| |||||||||||||||||||||| |||||| | |||||| |||||||||    
T  29163323 atgaagcacgaacacttctctgattagccgtgtcccggtgtcaggcacgtgtcgtgtccgacaccgacacatataattaaattgaattatgtgatttt 29163420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 34 - 190
Target Start/End: Original strand, 6612111 - 6612286
Alignment:
Q  34 tgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgaca-----------ccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||||| ||||||||||||||| ||||||||||||   ||||||||||||           ||||||| ||||||||||||||||| ||| |||||    
T  6612111 tgacactccttggattaggcgtgtcctggtgtcggacacatatcgtgtccgacatcgacacgacaccgacacttgtaattacactgaattatgtaatttt 6612210  T
Q  123 tacaaattctttgctgt--------gtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    | |||||| ||  ||||        |||| |||||||||||| ||||||||||||||||||||| |||||||||||    
T  6612211 ttcaaattattaactgtatcggcgtgtcattgtccgtgtcgtgtccggtgttcgtgtccgtatctgtgcttcatag 6612286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 21 - 190
Target Start/End: Original strand, 17831460 - 17831640
Alignment:
Q  21 atctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcg-tgtccgacac--------cgacacatgtaattacactgaat 111  Q
    ||||||||| ||  |||||||||  |||||||||||||||||||||||||||  |||| ||||||||||        |||||||| | ||||||||||||    
T  17831460 atctatgaaacatggacactcctaagattaggcgtgtcccggtgtcggacacatgtcggtgtccgacactgacacgacgacacatatgattacactgaat 17831559  T
Q  112 tttgtgatttttacaaattctttgctgtgtcag--tgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
      |||||||||  |||||| || || ||||| |  |||| ||||||||||||||||  ||||| |||||||||||||||||    
T  17831560 aatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtcgtatccggtgtctgtgtctgtatccgtgcttcatag 17831640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 32461393 - 32461465
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacaca 95  Q
    ||||||||||| |||||| || |||||||||||||||| ||||| |||||| |||||||||||||||||||||    
T  32461393 ctatgaagcacggacacttcttggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacaccgacaca 32461465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 86
Target Start/End: Complemental strand, 6427594 - 6427531
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgac 86  Q
    ||||||||||| ||||||| || |||||||||||||||||||||||||||| ||||||||||||    
T  6427594 ctatgaagcacggacactcatcagattaggcgtgtcccggtgtcggacacgtgtcgtgtccgac 6427531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 141
Target Start/End: Complemental strand, 31015156 - 31015044
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||||||||  ||||| ||||||||||||||||| |||| |||||| ||||||||||      |||| ||||||||||||||||| |||||||||    
T  31015156 ctatgaagcactgatcctccttggattaggcgtgtcccgatgtcagacacgtgtcgtgtccg------acacttgtaattacactgaattatgtgatttt 31015063  T
Q  123 tacaaattctttgctgtgt 141  Q
      |||||| || |||||||    
T  31015062 ctcaaattattagctgtgt 31015044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 21 - 147
Target Start/End: Original strand, 1704933 - 1705056
Alignment:
Q  21 atctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtc-cgacaccgacacatgtaattacactgaattttgtgat 119  Q
    ||||||||||||  ||||||||| |||||||||||||| ||||||||||||||     || | |||||||||||| ||||||||| ||||||| ||||||    
T  1704933 atctatgaagcatggacactccttggattaggcgtgtctcggtgtcggacacg----ttgacacgacaccgacacttgtaattaccctgaattatgtgat 1705028  T
Q  120 ttttacaaattctttgctgtgtcagtgt 147  Q
    |||| |||||| || | |||||| ||||    
T  1705029 tttttcaaattattagatgtgtcggtgt 1705056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 9690213 - 9690303
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtc-gtgtccgacaccgacacatgtaattacactgaatt 112  Q
    |||||||||||  ||||||  |||||||||||||||||||||||||||||| ||| ||| ||||| ||||||||| | |||||||||||||    
T  9690213 ctatgaagcacaaacactctccggattaggcgtgtcccggtgtcggacacgtgtcagtggccgacgccgacacatatgattacactgaatt 9690303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 191
Target Start/End: Complemental strand, 25934746 - 25934571
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccg-----------acacatgtaattacactgaat 111  Q
    ||||||||||| ||||||||| |||| |||||| |||| ||||| |||||| ||||||||||||||||           |||||| ||||||||||| ||    
T  25934746 ctatgaagcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacaccgacacgataccgacacatataattacactgtat 25934647  T
Q  112 tttgtgatttt-tacaaattctttgctgtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatagc 191  Q
    ||||||||||| || ||| | || |||||||| |    |||||| | |||||||| |||||||||||||||||||||||||    
T  25934646 tttgtgattttctagaaaat-ttagctgtgtcgg----cgtgtcatgtccggtgtccgtgtccgtatccgtgcttcatagc 25934571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 147
Target Start/End: Original strand, 27965940 - 27966062
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||||  |||||||||||||||||||||||||||||||| | |||| | |||||| ||||| |  |||| ||||||||||||||||  |||||||    
T  27965940 ctatgaagcatggacactcctcggattaggcgtgtcccggtgtcaggcacgaggcgtgtctgacacgg--acatataattacactgaatttaatgatttt 27966037  T
Q  123 tacaaattctttgctgtgtcagtgt 147  Q
      |||||| || ||  |||||||||    
T  27966038 ctcaaattgttagcaatgtcagtgt 27966062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 192
Target Start/End: Complemental strand, 36878585 - 36878415
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcg-----gacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtg 117  Q
    ||||||||||| ||||||||| |||||||||||||||| ||||||     |||| |  ||||||| ||||||||||| | ||||||||||||||| ||||    
T  36878585 ctatgaagcacggacactcctgggattaggcgtgtccccgtgtcgtgtcggacatgtttcgtgtcagacaccgacacctataattacactgaattatgtg 36878486  T
Q  118 atttttacaaattctttgctgtgtc--agtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatagct 192  Q
    |||||  |||||| || || |||||   ||||| ||||| ||     ||| ||||||||||||||||||||||||||    
T  36878485 attttctcaaattattagcggtgtcggcgtgtcagtgtc-ta-----tgtccgtgtccgtatccgtgcttcatagct 36878415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 23 - 142
Target Start/End: Complemental strand, 113412 - 113299
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||||  | ||||||||||||||||||||||||||||| |||||||   ||      ||||| |||| ||||||||||||||||| |||||||||    
T  113412 ctatgaagcatgggcactcctcggattaggcgtgtcccggtgttggacacgacacg------acacctacacttgtaattacactgaattatgtgatttt 113319  T
Q  123 tacaaattctttgctgtgtc 142  Q
    | |||||| || ||||||||    
T  113318 ttcaaattattagctgtgtc 113299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 28 - 187
Target Start/End: Complemental strand, 26830701 - 26830542
Alignment:
Q  28 aagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttttac-a 126  Q
    |||||| |||||||||| |||||||||||||||||| ||| ||||| || ||||| ||||| ||||| | |||||||| | |||| ||||||||||   |    
T  26830701 aagcacggacactcctctgattaggcgtgtcccggtatcgaacacgtgtagtgtctgacac-gacacttataattacatttaattatgtgatttttttta 26830603  T
Q  127 aattctttgctgtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttca 187  Q
    |||| ||   |||||  || |||||||||| |||| ||| ||||||| |||||||||||||    
T  26830602 aattattatttgtgttggtatccgtgtcgtgtccgatgtccgtgtccatatccgtgcttca 26830542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 25 - 161
Target Start/End: Complemental strand, 17778670 - 17778530
Alignment:
Q  25 atgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtc-------cgacaccgacacatgtaattacactgaattttgtg 117  Q
    |||||||||  ||||| |||||||||||| ||||||||||||||||||| |||| | |       |||||||||||| |||||||||||||   | ||||    
T  17778670 atgaagcacgaacacttctcggattaggcatgtcccggtgtcggacacgtgtcgcgacaccgacacgacaccgacacttgtaattacactg---tatgtg 17778574  T
Q  118 atttttacaaattctttgctgtgtcagtgtccgtgtcgtatccg 161  Q
    |||||| |||||| || |||||||| || |||||||||| ||||    
T  17778573 attttttcaaattattagctgtgtctgtctccgtgtcgtgtccg 17778530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 23 - 192
Target Start/End: Complemental strand, 18471414 - 18471240
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtga--tt 120  Q
    |||||||| || ||||||||||| |||||| ||||  |||||||||||||| |||||||     |||||||| |||||||| |||||||| |||||  ||    
T  18471414 ctatgaagtacggacactcctcgaattaggtgtgtttcggtgtcggacacgtgtcgtgt-----accgacacttgtaattatactgaattatgtgatttt 18471320  T
Q  121 tttacaaattctttgctgt--------gtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatagct 192  Q
    ||| |||||| || |||||        |||| ||||||||||||||||| | | ||||||| |||| |||||||||||||    
T  18471319 ttttcaaattattagctgtgtcgacgggtcattgtccgtgtcgtatccgatatccgtgtccatatctgtgcttcatagct 18471240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 21 - 95
Target Start/End: Complemental strand, 32900012 - 32899937
Alignment:
Q  21 atctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtc-gtgtccgacaccgacaca 95  Q
    ||||||||||||  |||| ||||||||||||| ||||||||||||| |||| ||||| ||||||||||||||||||    
T  32900012 atctatgaagcaaggacaatcctcggattaggggtgtcccggtgtccgacatgcgtcggtgtccgacaccgacaca 32899937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 38075909 - 38076008
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcg-tgtccgacaccgacacatgtaattacactgaattttgtgattt 121  Q
    ||||||||||   |||||||||  |||||||||||||||||||||| ||| | ||| |||||||||||||||||| | |||||||||| || ||||||||    
T  38075909 ctatgaagcatgtacactcctcaaattaggcgtgtcccggtgtcggtcacacatcgatgtccgacaccgacacatatgattacactgacttatgtgattt 38076008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 5944415 - 5944342
Alignment:
Q  21 atctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    |||||||||||||  |||||||||||||||||||| ||||||||||||||| | || ||||||| || ||||||    
T  5944415 atctatgaagcacgaacactcctcggattaggcgtatcccggtgtcggacatgtgttgtgtccgtcatcgacac 5944342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 122
Target Start/End: Original strand, 20157284 - 20157389
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtc-gtgtc-----cgacaccgacacatgtaattacactgaattttgt 116  Q
    ||||||||||| || |||||||  |||||| ||||| |||||||||||||||||| |||||     |||||||||||||| | ||||||||||||| |||    
T  20157284 ctatgaagcacggatactcctcaaattaggtgtgtctcggtgtcggacacgcgtcggtgtcggacacgacaccgacacatatgattacactgaattatgt 20157383  T
Q  117 gatttt 122  Q
    ||||||    
T  20157384 gatttt 20157389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 83 - 190
Target Start/End: Original strand, 24577186 - 24577289
Alignment:
Q  83 cgacaccgacacatgtaattacactgaattttgtgatttttacaaattctttgctgtgtca--gtgtccgtgtcgtatccggtgttc-gtgtccgtatcc 179  Q
    |||||||||||| ||||||||||||||||| |||||||||| |||||| || | |||||||  |||||||||||       |||||| ||||||||||||    
T  24577186 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcagcgtgtccgtgtc-------gtgttcagtgtccgtatcc 24577278  T
Q  180 gtgcttcatag 190  Q
    |||||||||||    
T  24577279 gtgcttcatag 24577289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 193
Target Start/End: Original strand, 43492434 - 43492600
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||||||  |  ||| ||||||||||||||| ||||||||||||| | || ||||| ||||||||||||  ||||||||| |||||  ||||||||    
T  43492434 ctatgaagcacatatgctcttcggattaggcgtgtgccggtgtcggacatgtgttgtgtctgacaccgacacacataattacaccgaattacgtgatttt 43492533  T
Q  123 tacaaattctttgctgtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatagcta 193  Q
      ||||||  | |  ||||| |    |||||||| ||||||||  ||||||||||| ||| ||||||||||    
T  43492534 ctcaaattactagtggtgtcgg----cgtgtcgtgtccggtgtctgtgtccgtatctgtgattcatagcta 43492600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 398828 - 398880
Alignment:
Q  138 gtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    ||||||||||||||||||| |||||||| || |||||||||||||||||||||    
T  398828 gtgtcagtgtccgtgtcgtgtccggtgtccgcgtccgtatccgtgcttcatag 398880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 120
Target Start/End: Complemental strand, 12919063 - 12918967
Alignment:
Q  24 tatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatt 120  Q
    ||||||||||  ||||| ||||||| || |||||||| ||||| |||||| ||||||||||| ||| |||||| |||| ||| |||||| |||||||    
T  12919063 tatgaagcacgaacacttctcggataagccgtgtccccgtgtcagacacgtgtcgtgtccgataccaacacatataatcacattgaattatgtgatt 12918967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 22794018 - 22794125
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtc-gtgtccgacaccgacacatgtaattacactgaattttgtgattt 121  Q
    |||||||||||  |||||||||| |||||| ||||||||| |||||||| ||||| ||||| |||| |||||| | ||||||||||| ||| ||| ||||    
T  22794018 ctatgaagcacgtacactcctcgaattaggtgtgtcccggagtcggacatgcgtcagtgtcggaca-cgacacctataattacactgtattatgtcattt 22794116  T
Q  122 ttacaaatt 130  Q
    || ||||||    
T  22794117 tttcaaatt 22794125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 75
Target Start/End: Original strand, 46940748 - 46940800
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcg 75  Q
    |||||||||||  |||||||||||||||||||||| |||||||||||||||||    
T  46940748 ctatgaagcacgaacactcctcggattaggcgtgttccggtgtcggacacgcg 46940800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 35 - 122
Target Start/End: Original strand, 2896073 - 2896160
Alignment:
Q  35 gacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||| || |||||||| |||||||||| ||||||||  |||||||| |||||||||| || ||  ||||||||||| |||||||||    
T  2896073 gacacttcttggattaggtgtgtcccggtctcggacacatgtcgtgtctgacaccgacatatatagctacactgaattatgtgatttt 2896160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 90
Target Start/End: Original strand, 18556385 - 18556452
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccg 90  Q
    ||||||||||| |||||| ||||||||||||||||||| |||||||| ||| |||| ||| |||||||    
T  18556385 ctatgaagcacggacacttctcggattaggcgtgtcccagtgtcggatacgtgtcgggtctgacaccg 18556452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 19562556 - 19562626
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    ||||||||||| |||||||||||||||||| ||||||| |||||||||||| || || |||||||| |||||    
T  19562556 ctatgaagcac-gacactcctcggattaggtgtgtccctgtgtcggacacgtgttgtatccgacactgacac 19562626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 122
Target Start/End: Complemental strand, 30749959 - 30749860
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||||  ||||||||||| || | |||| |||  |||||  ||||  || ||||||||||||||||||| ||||||||||||||| |||||||||    
T  30749959 ctatgaagcatggacactcctcgaataatgcgtatcctcgtgtcaaacacatgtggtgtccgacaccgacacatataattacactgaattatgtgatttt 30749860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 122
Target Start/End: Complemental strand, 30771410 - 30771311
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||||  ||||||||||| || | |||| |||  |||||  ||||  || ||||||||||||||||||| ||||||||||||||| |||||||||    
T  30771410 ctatgaagcatggacactcctcgaataatgcgtatcctcgtgtcaaacacatgtggtgtccgacaccgacacatataattacactgaattatgtgatttt 30771311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 31694639 - 31694710
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    ||||||||||| |||||||||| |||||||||||| ||||||||| | | | || |||||||||||||||||    
T  31694639 ctatgaagcacggacactcctcagattaggcgtgttccggtgtcgaatatgtgttgtgtccgacaccgacac 31694710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 111
Target Start/End: Complemental strand, 19637889 - 19637799
Alignment:
Q  21 atctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaat 111  Q
    |||||||| ||||  | ||||||||||||||| | |||||||||||||| | |  ||||||||||||||||||||| | |||||| |||||    
T  19637889 atctatgatgcacaaatactcctcggattaggggcgtcccggtgtcggatatgtatcgtgtccgacaccgacacatatgattacattgaat 19637799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 21032335 - 21032265
Alignment:
Q  24 tatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    |||||||||| ||||||||| ||||||||||| || || ||||||||||  ||||||||||||||| ||||    
T  21032335 tatgaagcacagacactccttggattaggcgtctctcgatgtcggacacatgtcgtgtccgacacccacac 21032265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 69
Target Start/End: Original strand, 21365992 - 21366038
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcgga 69  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||    
T  21365992 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcgga 21366038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 77 - 147
Target Start/End: Original strand, 31672889 - 31672959
Alignment:
Q  77 cgtgtccgacaccgacacatgtaattacactgaattttgtgatttttacaaattctttgctgtgtcagtgt 147  Q
    ||||||||||||||| || |||||||||||||||||  ||||||||| |||||| || |||||||| ||||    
T  31672889 cgtgtccgacaccgagacttgtaattacactgaattaagtgattttttcaaattattagctgtgtcggtgt 31672959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 72
Target Start/End: Original strand, 29144320 - 29144369
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacac 72  Q
    ||||||||||| ||||||| ||||||||||||||| ||||||||||||||    
T  29144320 ctatgaagcacggacactcttcggattaggcgtgttccggtgtcggacac 29144369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 189
Target Start/End: Original strand, 6414932 - 6415110
Alignment:
Q  24 tatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtcc----------gacaccgacacatgtaattacactgaattt 113  Q
    |||||||||| |||||||||||||| |   ||||| ||||||| |||||| |||||||||          ||||||||||||| |||||| |||| |||     
T  6414932 tatgaagcacggacactcctcggatgaaatgtgtcgcggtgtcagacacgtgtcgtgtccgacatcgaatgacaccgacacatctaattaaactgtatta 6415031  T
Q  114 tgtgatttttacaaattctttgctgtgtc--agtgtccgtgt-cgtatccggtgttcgtgtccgtatccgtgcttcata 189  Q
    |||||||||  |||||  || ||  ||||   ||||| |||| ||| ||||||||||||||||||||||||||||||||    
T  6415032 tgtgattttctcaaataattagcgatgtcggcgtgtcagtgtccgtgtccggtgttcgtgtccgtatccgtgcttcata 6415110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 34741965 - 34741894
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacg-cgtcgtgtccgacaccgacac 94  Q
    ||||||||||| ||||||| |||||||||||||||||| ||||||||||||  |||||||| |||||| ||||    
T  34741965 ctatgaagcacggacactcttcggattaggcgtgtccc-gtgtcggacacgttgtcgtgtcagacaccaacac 34741894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 41597410 - 41597482
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacaca 95  Q
    ||||||||||| ||||||||| |||| | |||| |||| ||||| |||||| |||||||||||||| ||||||    
T  41597410 ctatgaagcacagacactccttggataaagcgtatccccgtgtcagacacgtgtcgtgtccgacacggacaca 41597482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 122
Target Start/End: Original strand, 7918154 - 7918250
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtc-cgacaccgacacatgtaattacactgaattttgtgattt 121  Q
    ||||||||||| |||||||||||||||||| |||||| |||||| || |||     || | |||||| ||||||| ||||||||||||||| ||||||||    
T  7918154 ctatgaagcacggacactcctcggattaggtgtgtcctggtgtcagaaacg----ttgacacgacactgacacatataattacactgaattatgtgattt 7918249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 78
Target Start/End: Complemental strand, 15765877 - 15765822
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcg 78  Q
    ||||||||||| ||||||| |||||||||||||||||| ||||| ||||| |||||    
T  15765877 ctatgaagcacggacactcttcggattaggcgtgtcccagtgtcagacacacgtcg 15765822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 78
Target Start/End: Complemental strand, 16812675 - 16812620
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcg 78  Q
    ||||||||||| |||||||||| |||||||||||||||||| ||||| | ||||||    
T  16812675 ctatgaagcacggacactcctcagattaggcgtgtcccggtttcggataagcgtcg 16812620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 22947849 - 22947806
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtc 66  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||    
T  22947849 ctatgaagcacggacactcctcggattaggcgtgtccaggtgtc 22947806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 77 - 147
Target Start/End: Original strand, 1864874 - 1864944
Alignment:
Q  77 cgtgtccgacaccgacacatgtaattacactgaattttgtgatttttacaaattctttgctgtgtcagtgt 147  Q
    ||||||| |||||||||||| ||||||||||||||| |||||||||  |||||| ||  ||||||| ||||    
T  1864874 cgtgtccaacaccgacacatataattacactgaattatgtgattttctcaaattattaactgtgtcggtgt 1864944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 73
Target Start/End: Complemental strand, 2218347 - 2218297
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacg 73  Q
    ||||||||||| |||||||||| ||||||||||||||  ||||||||||||    
T  2218347 ctatgaagcacggacactcctcagattaggcgtgtcctagtgtcggacacg 2218297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 45 - 123
Target Start/End: Complemental strand, 13997980 - 13997902
Alignment:
Q  45 ggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgattttt 123  Q
    ||||||| ||||||  |||||  |||| | ||||| ||| |||||||||||| ||||||||||||||| ||||||||||    
T  13997980 ggattagacgtgtcatggtgtttgacatgtgtcgtctccaacaccgacacatataattacactgaattatgtgattttt 13997902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 73
Target Start/End: Complemental strand, 15323287 - 15323237
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacg 73  Q
    ||||||| |||||||||||||||||||||| ||||  ||||||||||||||    
T  15323287 ctatgaaacactgacactcctcggattaggtgtgtttcggtgtcggacacg 15323237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 19058850 - 19058915
Alignment:
Q  77 cgtgtccgacaccgacacatgtaattacactgaattttgtgatttttacaaattctttgctgtgtc 142  Q
    |||||||||||||||||| ||||||||||||||||| ||| || |||  ||||| || ||||||||    
T  19058850 cgtgtccgacaccgacacttgtaattacactgaattatgttatctttttaaattattagctgtgtc 19058915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 25362012 - 25361945
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    ||||||||||| ||||||| |||||||||  |||| |||||||||||||   ||||||||||||||||||||    
T  25362012 ctatgaagcacggacactcttcggattag--gtgttccggtgtcggaca--tgtcgtgtccgacaccgacac 25361945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 122
Target Start/End: Original strand, 34712321 - 34712422
Alignment:
Q  21 atctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatt 120  Q
    ||||||||||||| ||||||||| | ||||| |||||||| |||| ||||||| |||     |||||| ||||||| |||||||||| |||| ||| |||    
T  34712321 atctatgaagcacggacactccttgaattagacgtgtcccagtgtaggacacgtgtccgacacgacactgacacatataattacactaaattatgttatt 34712420  T
Q  121 tt 122  Q
    ||    
T  34712421 tt 34712422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 35702542 - 35702579
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtccc 60  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  35702542 ctatgaagcacggacactcctcggattaggcgtgtccc 35702579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 112
Target Start/End: Original strand, 39130719 - 39130796
Alignment:
Q  35 gacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaatt 112  Q
    ||||||| | |||||| |||||||||  |||||  |||| || ||||||||||||||||||| |||||||||| ||||    
T  39130719 gacactctttggattaagcgtgtcccaatgtcgagcacgtgttgtgtccgacaccgacacatataattacactaaatt 39130796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 83
Target Start/End: Complemental strand, 6427634 - 6427594
Alignment:
Q  43 tcggattaggcgtgtcccggtgtcggacacgcgtcgtgtcc 83  Q
    ||||||||||||||||||||| ||||||||| |||||||||    
T  6427634 tcggattaggcgtgtcccggtatcggacacgtgtcgtgtcc 6427594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 10233374 - 10233326
Alignment:
Q  24 tatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacac 72  Q
    |||||||||| |||||||||| ||||||| |||||| ||||||||||||    
T  10233374 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 10233326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 121
Target Start/End: Complemental strand, 13436523 - 13436479
Alignment:
Q  77 cgtgtccgacaccgacacatgtaattacactgaattttgtgattt 121  Q
    ||||||||||||| |||||| ||||||||||||||| ||||||||    
T  13436523 cgtgtccgacaccaacacatataattacactgaattatgtgattt 13436479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 122
Target Start/End: Original strand, 14332633 - 14332681
Alignment:
Q  74 cgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||||||||||||| |||| |||||||||| |||| |||||||||    
T  14332633 cgtcgtgtccgacaccgagacatataattacactaaattatgtgatttt 14332681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 190
Target Start/End: Original strand, 41877464 - 41877585
Alignment:
Q  77 cgtgtccgacaccgacacatgtaattacactgaattttgtgatttttacaaattctttgctgtgt--------cagtgtccgtgtcgtatccggtgttcg 168  Q
    |||||||||||||||||| |||||||||||| |||| ||| |||||  |||||| || || ||||        ||||||| ||||||| || ||| | |     
T  41877464 cgtgtccgacaccgacacttgtaattacactaaattatgtaattttctcaaattattagcggtgtcggcgtaccagtgtctgtgtcgtgtctggtatcca 41877563  T
Q  169 tgtccgtatccgtgcttcatag 190  Q
    ||||||||||||||||||||||    
T  41877564 tgtccgtatccgtgcttcatag 41877585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 48548025 - 48548077
Alignment:
Q  138 gtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    |||||| ||||||| | || |||||||| ||||||||||||||||||||||||    
T  48548025 gtgtcattgtccgtattgtgtccggtgtccgtgtccgtatccgtgcttcatag 48548077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 56
Target Start/End: Original strand, 2288119 - 2288158
Alignment:
Q  17 atcgatctatgaagcactgacactcctcggattaggcgtg 56  Q
    ||||| |||||||||||||||| |||||||||||||||||    
T  2288119 atcgacctatgaagcactgacattcctcggattaggcgtg 2288158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 73
Target Start/End: Complemental strand, 8117170 - 8117119
Alignment:
Q  22 tctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacg 73  Q
    |||||||| | | |||| |||||||||||||||||||||| |||||||||||    
T  8117170 tctatgaatcgcagacattcctcggattaggcgtgtcccgatgtcggacacg 8117119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 189
Target Start/End: Complemental strand, 9103636 - 9103585
Alignment:
Q  138 gtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcata 189  Q
    ||||||||||||| ||| | || ||||||||||||| |||||||||||||||    
T  9103636 gtgtcagtgtccgagtcctgtcaggtgttcgtgtccatatccgtgcttcata 9103585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 16164244 - 16164315
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    ||||||| |||  |||||| ||||||||||||||||| ||||||||||||| || | |||| ||||| ||||    
T  16164244 ctatgaaacacatacactcttcggattaggcgtgtcctggtgtcggacacgtgttgcgtccaacaccaacac 16164315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 112
Target Start/End: Original strand, 24334699 - 24334734
Alignment:
Q  77 cgtgtccgacaccgacacatgtaattacactgaatt 112  Q
    |||||||||||||||||| |||||||||||||||||    
T  24334699 cgtgtccgacaccgacacttgtaattacactgaatt 24334734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 122
Target Start/End: Complemental strand, 34371772 - 34371733
Alignment:
Q  83 cgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||||||||| ||||||||||||||| |||||||||    
T  34371772 cgacaccgacacatataattacactgaattatgtgatttt 34371733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 122
Target Start/End: Complemental strand, 44482289 - 44482250
Alignment:
Q  83 cgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||||||||| ||||||||||||||| |||||||||    
T  44482289 cgacaccgacacatataattacactgaattatgtgatttt 44482250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 105
Target Start/End: Original strand, 8842678 - 8842736
Alignment:
Q  47 attaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattaca 105  Q
    ||||||||||||| | ||||||| ||| ||||||||||||||| | |||| ||||||||    
T  8842678 attaggcgtgtcctgatgtcggatacgtgtcgtgtccgacaccaatacatataattaca 8842736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 94
Target Start/End: Original strand, 9629834 - 9629900
Alignment:
Q  28 aagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    |||||| |||||| || |||  || ||||||||||||||||||| | ||||||||||||| ||||||    
T  9629834 aagcacggacacttcttggacgagacgtgtcccggtgtcggacatgtgtcgtgtccgacatcgacac 9629900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 76
Target Start/End: Original strand, 11634066 - 11634116
Alignment:
Q  26 tgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgt 76  Q
    |||||||| ||||||| ||||||| || |||||| ||||||||||||||||    
T  11634066 tgaagcacggacactcttcggatttggtgtgtcctggtgtcggacacgcgt 11634116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 147
Target Start/End: Complemental strand, 21378635 - 21378573
Alignment:
Q  85 acaccgacacatgtaattacactgaattttgtgatttttacaaattctttgctgtgtcagtgt 147  Q
    |||||||||| ||||||||||||||||| ||| |||||| ||| || || |||||||| ||||    
T  21378635 acaccgacacttgtaattacactgaattatgtaattttttcaatttattagctgtgtcggtgt 21378573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 123
Target Start/End: Complemental strand, 21621020 - 21620974
Alignment:
Q  77 cgtgtccgacaccgacacatgtaattacactgaattttgtgattttt 123  Q
    |||||||||||||||| | ||||| ||||||||||| ||||||||||    
T  21621020 cgtgtccgacaccgacgcttgtaaatacactgaattatgtgattttt 21620974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 123
Target Start/End: Complemental strand, 33203020 - 33202922
Alignment:
Q  25 atgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgattttt 123  Q
    |||||||||  | ||||||||||||||||||||| |||||||||| | |  ||||||| |||||| | |||| | |||||| ||| || ||| ||||||    
T  33203020 atgaagcacatatactcctcggattaggcgtgtcacggtgtcggatatgtatcgtgtctgacaccaaaacatatgattacattgatttatgtcattttt 33202922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 175
Target Start/End: Original strand, 35702581 - 35702682
Alignment:
Q  76 tcgtgtccgacaccgacacatgtaattacactgaattttgtgatttttacaaattctttgctgtgtcag--tgtccgtgtcgtatccggtgttcgtgtcc 173  Q
    ||||||||||||| ||||| |||||||||||| |||| | |||  ||| |||||| || |||||||| |  |||| ||||||| |||||||| ||| |||    
T  35702581 tcgtgtccgacactgacacttgtaattacacttaattatttgaagttttcaaattattagctgtgtcggcatgtcagtgtcgtgtccggtgtccgtatcc 35702680  T
Q  174 gt 175  Q
    ||    
T  35702681 gt 35702682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 95
Target Start/End: Complemental strand, 36906128 - 36906055
Alignment:
Q  21 atctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacaca 95  Q
    ||||||||||||| ||||||| | | |||||| ||||||| ||||| ||| || |||||||||||||| ||||||    
T  36906128 atctatgaagcacggacactctt-gcattaggtgtgtcccagtgtcagacgcgggtcgtgtccgacactgacaca 36906055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 48040418 - 48040464
Alignment:
Q  27 gaagcactgacactcctcggattaggcgtgtcccggtgtcggacacg 73  Q
    ||||||| ||||||||||  |||||||||||||| ||||||||||||    
T  48040418 gaagcacggacactcctccaattaggcgtgtcccagtgtcggacacg 48040464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 6574096 - 6574051
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcgg 68  Q
    ||||||||||| | ||||||| |||||||||||||||| |||||||    
T  6574096 ctatgaagcacggtcactccttggattaggcgtgtcccagtgtcgg 6574051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 123
Target Start/End: Original strand, 7353452 - 7353533
Alignment:
Q  43 tcggattaggcgtgtcccggtgtcggaca-cgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgattttt 123  Q
    |||||||||||||||| | |||||||| | || ||| ||| ||||||||||| || |||||||||| |||| ||| ||||||    
T  7353452 tcggattaggcgtgtctcagtgtcggaaaacgtgtcatgttcgacaccgacatatataattacactaaattatgtaattttt 7353533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 122
Target Start/End: Complemental strand, 9709885 - 9709840
Alignment:
Q  77 cgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||||||||||||||| ||||||||  ||||| |||||||||    
T  9709885 cgtgtccgacaccgacacatataattacaacgaattatgtgatttt 9709840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 191
Target Start/End: Original strand, 21366083 - 21366136
Alignment:
Q  138 gtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatagc 191  Q
    ||||| |||| |||||||| | |||||||| ||||||||| |||||||||||||    
T  21366083 gtgtcggtgttcgtgtcgtgttcggtgttcatgtccgtatgcgtgcttcatagc 21366136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 187
Target Start/End: Original strand, 23531841 - 23531890
Alignment:
Q  138 gtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttca 187  Q
    ||||| |||||||| |||| ||| |||| |||||||||||||||||||||    
T  23531841 gtgtcggtgtccgtatcgtgtccagtgtccgtgtccgtatccgtgcttca 23531890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 28273089 - 28273134
Alignment:
Q  84 gacaccgacacatgtaattacactgaattttgtgatttttacaaat 129  Q
    ||||||||||| ||||||||||||||||| | |||||||| |||||    
T  28273089 gacaccgacacttgtaattacactgaattatatgattttttcaaat 28273134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #101
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 190
Target Start/End: Complemental strand, 38503317 - 38503264
Alignment:
Q  137 tgtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    ||||| |||||||||||| | ||| |||| ||||||||||||||||| ||||||    
T  38503317 tgtgttagtgtccgtgtcatgtcccgtgtccgtgtccgtatccgtgcatcatag 38503264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #102
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 42004882 - 42004954
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtc-gtgtccgacaccgacaca 95  Q
    ||||||||||| ||||||| ||| |||||||||||    |||||||||| ||||| ||||||||||||||||||    
T  42004882 ctatgaagcacggacactcttcgaattaggcgtgt-ttagtgtcggacatgcgtcggtgtccgacaccgacaca 42004954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #103
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 72
Target Start/End: Complemental strand, 42325678 - 42325629
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacac 72  Q
    ||||||||||| ||||||||||| |||||| |||||||| |||| |||||    
T  42325678 ctatgaagcacagacactcctcgaattaggtgtgtcccgatgtccgacac 42325629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #104
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 190
Target Start/End: Complemental strand, 2218253 - 2218225
Alignment:
Q  162 gtgttcgtgtccgtatccgtgcttcatag 190  Q
    |||||||||||||||||||||||||||||    
T  2218253 gtgttcgtgtccgtatccgtgcttcatag 2218225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #105
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 2784636 - 2784576
Alignment:
Q  62 gtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||| || ||| ||||| ||||||||||||| |||||| ||| |||| |||||||||    
T  2784636 gtgtcggatacacgttgtgtctgacaccgacacatataattatactcaattatgtgatttt 2784576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #106
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 123
Target Start/End: Complemental strand, 5944342 - 5944302
Alignment:
Q  83 cgacaccgacacatgtaattacactgaattttgtgattttt 123  Q
    |||||||||||| | ||||||||||||||| ||||||||||    
T  5944342 cgacaccgacacttataattacactgaattatgtgattttt 5944302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #107
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 123
Target Start/End: Complemental strand, 6332729 - 6332689
Alignment:
Q  83 cgacaccgacacatgtaattacactgaattttgtgattttt 123  Q
    ||||||||| || ||||||||||||||||| ||||||||||    
T  6332729 cgacaccgatacttgtaattacactgaattatgtgattttt 6332689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #108
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 9630561 - 9630597
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcc 59  Q
    |||||||||||  ||||||||||||||||||||||||    
T  9630561 ctatgaagcacgaacactcctcggattaggcgtgtcc 9630597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #109
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 17408821 - 17408749
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacaca 95  Q
    ||||||||||| ||||||| || ||||||| || ||  ||||||||||||| |||||||| || ||| |||||    
T  17408821 ctatgaagcacagacactcttcagattaggtgtatcttggtgtcggacacgtgtcgtgtctgataccaacaca 17408749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #110
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 26051665 - 26051594
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtc-gtgtccgacaccgacac 94  Q
    |||||||||||  |||||| ||| |||||| |||||||||| || ||||| |||| |||||||||||||||||    
T  26051665 ctatgaagcacgaacactc-tcgaattaggagtgtcccggtatctgacacacgtcagtgtccgacaccgacac 26051594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #111
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 122
Target Start/End: Complemental strand, 28674896 - 28674820
Alignment:
Q  46 gattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||||||| | |||| ||||| | |||||||| |||||| ||| || |||||| |||||||| ||| |||||    
T  28674896 gattaggcgtgtctcagtgttggacaagtgtcgtgtctgacaccaacatatataattatactgaattatgtaatttt 28674820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #112
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 30359484 - 30359440
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcg 67  Q
    ||||||||||| |||||||||| |||| ||||||||||| |||||    
T  30359484 ctatgaagcacggacactcctcagatttggcgtgtcccgttgtcg 30359440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #113
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 73
Target Start/End: Original strand, 35919225 - 35919277
Alignment:
Q  22 tctatgaagcactgacactcctcggattaggcgtgtcccg-gtgtcggacacg 73  Q
    |||||||||||| |||| ||||| |||||||||||||||| ||||| ||||||    
T  35919225 tctatgaagcacggacagtcctccgattaggcgtgtcccgcgtgtccgacacg 35919277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #114
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 122
Target Start/End: Original strand, 39953141 - 39953185
Alignment:
Q  78 gtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||||||||||||||  ||||||||| |||| |||||||||    
T  39953141 gtgtccgacaccgacacatacaattacactaaattatgtgatttt 39953185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #115
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 40747707 - 40747755
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggaca 71  Q
    ||||||||||| ||| |||||||||||||| ||||||| |||| |||||    
T  40747707 ctatgaagcacggacgctcctcggattaggggtgtccctgtgtgggaca 40747755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #116
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 41597533 - 41597585
Alignment:
Q  138 gtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    ||||| ||||||||||||| |  ||||| ||| ||||||||||||||||||||    
T  41597533 gtgtcggtgtccgtgtcgtgtttggtgtccgtatccgtatccgtgcttcatag 41597585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #117
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 48450550 - 48450586
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcc 59  Q
    ||||||||||| ||||||||||||||||| |||||||    
T  48450550 ctatgaagcacggacactcctcggattagacgtgtcc 48450586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 24 - 188
Target Start/End: Original strand, 403 - 575
Alignment:
Q  24 tatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgattttt 123  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  403 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacttgtaattacactgaattttgtgattttt 502  T
Q  124 acaaattctttgctgtg--------tcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcat 188  Q
     |||||| || || |||        |||||||||||| ||| | |||||| ||||||||||||||||||||||    
T  503 tcaaattattagcagtgtcggcgtatcagtgtccgtggcgtgttcggtgtccgtgtccgtatccgtgcttcat 575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 99; Significance: 5e-49; HSPs: 111)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 23 - 190
Target Start/End: Original strand, 23292926 - 23293101
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||| |||||||||    
T  23292926 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattatactgaattatgtgatttt 23293025  T
Q  123 tacaaattctttgct--------gtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    | |||||| || |||        |||||| |||||||||||| |||||||| |||||||||||| |||||||||||    
T  23293026 ttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtgtccgtatctgtgcttcatag 23293101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 25 - 190
Target Start/End: Complemental strand, 4157266 - 4157102
Alignment:
Q  25 atgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgattttta 124  Q
    ||||||||| ||||||||||| |||||| || || |||||||||||| | |||||||||||||||||||| ||||||| |||| |||| ||||||||||     
T  4157266 atgaagcacagacactcctcgaattaggtgtttctcggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattgcactaaattatgtgattttt- 4157168  T
Q  125 caaattctttgctgtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    |||||| || | |||||||||||| ||||||| || ||||| ||||||||||||||||||||||||    
T  4157167 caaattattagttgtgtcagtgtctgtgtcgtgtctggtgtccgtgtccgtatccgtgcttcatag 4157102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 23 - 149
Target Start/End: Original strand, 28964188 - 28964314
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||||  |||||||||||||||||||||||||| |||||||| | | |||||||||||||| ||||| ||||||||||||||||| |||||||||    
T  28964188 ctatgaagcatggacactcctcggattaggcgtgtcccagtgtcggatatgtgtcgtgtccgacacagacacttgtaattacactgaattatgtgatttt 28964287  T
Q  123 tacaaattctttgctgtgtcagtgtcc 149  Q
    | |||||| || ||| ||||| |||||    
T  28964288 ttcaaattattagctatgtcaatgtcc 28964314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 20 - 192
Target Start/End: Complemental strand, 42640646 - 42640474
Alignment:
Q  20 gatctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgat 119  Q
    |||||||||||||| || |||||||||||||||||||||| |||| ||||||||     |||||||||||||||| ||||||||||||||||| ||||||    
T  42640646 gatctatgaagcacggaaactcctcggattaggcgtgtcctggtgccggacacg-----tgtccgacaccgacacttgtaattacactgaattatgtgat 42640552  T
Q  120 tttta---caaattctttgctgtgtcag--tgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatagct 192  Q
    ||||    |||||| |  |||||||| |  ||||||||| || |||  ||| ||||||||||||||||||||||||||    
T  42640551 ttttttttcaaattatcagctgtgtcggcgtgtccgtgttgtgtccaatgtccgtgtccgtatccgtgcttcatagct 42640474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 21 - 123
Target Start/End: Complemental strand, 49431147 - 49431045
Alignment:
Q  21 atctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatt 120  Q
    |||||| |||||  |||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||||| | ||||||||||||||| |||||||    
T  49431147 atctataaagcatggacactcctcggataaggcgtgtcccggtgttggacacgtgtcgtgtccgacaccgacacttttaattacactgaattatgtgatt 49431048  T
Q  121 ttt 123  Q
    |||    
T  49431047 ttt 49431045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 142
Target Start/End: Complemental strand, 21945623 - 21945503
Alignment:
Q  22 tctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgattt 121  Q
    |||| ||||||  |||||||||||||||||||||||  |||||||||||| | ||| |||||||||||||||| ||||||||||||||||| ||| ||||    
T  21945623 tctaagaagcatagacactcctcggattaggcgtgttgcggtgtcggacatgtgtcatgtccgacaccgacacttgtaattacactgaattatgtcattt 21945524  T
Q  122 ttacaaattctttgctgtgtc 142  Q
    || |||||| || ||||||||    
T  21945523 tttcaaattattagctgtgtc 21945503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 147
Target Start/End: Original strand, 2361913 - 2362039
Alignment:
Q  21 atctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatt 120  Q
    ||||||||||||| ||||||| || ||||||| ||||| ||||||| |||||| |||||||||||||||||||| | |||||||||| |||| ||| |||    
T  2361913 atctatgaagcacggacactcgtcagattaggtgtgtctcggtgtcagacacgagtcgtgtccgacaccgacacttttaattacactaaattatgtaatt 2362012  T
Q  121 tttacaaattctttgctgtgtcagtgt 147  Q
    ||| |||||| || |||||||| ||||    
T  2362013 ttttcaaattattagctgtgtcggtgt 2362039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 190
Target Start/End: Original strand, 3947702 - 3947874
Alignment:
Q  24 tatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacacc-----gacacatgtaattacactgaattttgtga 118  Q
    |||||||||| |||||||||||||||||| |||||| ||||||||||||| ||||||||||||||      ||||| ||||||||||||||||| || ||    
T  3947702 tatgaagcacggacactcctcggattaggtgtgtcctggtgtcggacacgtgtcgtgtccgacacgacactgacacttgtaattacactgaattatgcga 3947801  T
Q  119 tttttacaaattctttgctgtgtcag--tgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    ||||| |||||| || |||||||| |  |||||||||| | |  ||||| |||||||||||| | |||||||||    
T  3947802 ttttttcaaattattagctgtgtcggcatgtccgtgtc-tgtgtggtgtccgtgtccgtatctgagcttcatag 3947874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 21 - 123
Target Start/End: Original strand, 715543 - 715647
Alignment:
Q  21 atctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtcc--gacaccgacacatgtaattacactgaattttgtga 118  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||| | ||||||| |  |||||| |||| ||||||||||||||||| |||||    
T  715543 atctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgtacaagacaccaacacttgtaattacactgaattatgtga 715642  T
Q  119 ttttt 123  Q
    |||||    
T  715643 ttttt 715647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 21 - 123
Target Start/End: Original strand, 752869 - 752973
Alignment:
Q  21 atctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtcc--gacaccgacacatgtaattacactgaattttgtga 118  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||| | ||||||| |  |||||| |||| ||||||||||||||||| |||||    
T  752869 atctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgtacaagacaccaacacttgtaattacactgaattatgtga 752968  T
Q  119 ttttt 123  Q
    |||||    
T  752969 ttttt 752973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 23 - 181
Target Start/End: Original strand, 35157925 - 35158091
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||||| |||||| ||||||||| |||||| ||||||| ||||| | |||||||| ||||||||||| | |||||||||| |||| |||||||||    
T  35157925 ctatgaagcacggacacttctcggattaagcgtgttccggtgttggacatgtgtcgtgtcagacaccgacacttataattacactaaattatgtgatttt 35158024  T
Q  123 tacaaattctttgct--------gtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgt 181  Q
    | |||||| || | |        |||||||||||||||| || |||||||| |||||||||||||||    
T  35158025 tccaaattattagttgcgtcggcgtgtcagtgtccgtgttgtgtccggtgtccgtgtccgtatccgt 35158091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 23 - 192
Target Start/End: Original strand, 12895214 - 12895391
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||||||  |||||||||||||||||||||||||| ||||||| ||  |||||||||||||||||||| | |||||||||  |||| |||||||||    
T  12895214 ctatgaagcacgaacactcctcggattaggcgtgtcccgatgtcggatacatgtcgtgtccgacaccgacacttataattacacaaaattatgtgatttt 12895313  T
Q  123 tacaaattct--------ttgctgtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatagct 192  Q
    | |||||| |        | |  |||||| ||| ||||||||||||||||| ||| |||||||| ||| |||||||||    
T  12895314 ttcaaattattatttgtgtcggcgtgtcattgttcgtgtcgtatccggtgtccgtatccgtatctgtgtttcatagct 12895391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 53 - 154
Target Start/End: Complemental strand, 29205533 - 29205432
Alignment:
Q  53 cgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttttacaaattctttgctgtgtcagtgtccgtg 152  Q
    ||||||||||||||||||| | ||||||||| |||||||||| ||||||||||||||||| |||||||||| |||||| || || ||||  |||||||||    
T  29205533 cgtgtcccggtgtcggacatgtgtcgtgtccaacaccgacacttgtaattacactgaattatgtgattttttcaaattattagccgtgttggtgtccgtg 29205434  T
Q  153 tc 154  Q
    ||    
T  29205433 tc 29205432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 22 - 107
Target Start/End: Original strand, 34306743 - 34306828
Alignment:
Q  22 tctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacact 107  Q
    ||||||||||||  ||| ||||| ||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||    
T  34306743 tctatgaagcacgaacattcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacact 34306828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 23 - 123
Target Start/End: Complemental strand, 16073513 - 16073413
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||||  ||||||||||||||||||||||||   |||||||||| |  ||||||||||||||||||| ||||||||||||||||| || ||||||    
T  16073513 ctatgaagcatggacactcctcggattaggcgtgtcttagtgtcggacatgtatcgtgtccgacaccgacacttgtaattacactgaattatgcgatttt 16073414  T
Q  123 t 123  Q
    |    
T  16073413 t 16073413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 23 - 122
Target Start/End: Original strand, 8423658 - 8423757
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||| |||| |||||| ||| ||||||||||||||||||||||||||   |||||||||||||||||||  | ||||||||||||||| |||||||||    
T  8423658 ctatgacgcacggacacttctccgattaggcgtgtcccggtgtcggacagctgtcgtgtccgacaccgacatttataattacactgaattatgtgatttt 8423757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 25 - 123
Target Start/End: Complemental strand, 4157553 - 4157455
Alignment:
Q  25 atgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgattttt 123  Q
    ||||||||  ||||||||||| ||||||||| || |||||||||||| | |||||||||||||||||||| ||||||| |||| |||| ||||||||||    
T  4157553 atgaagcatagacactcctcgaattaggcgtttctcggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattgcactaaattatgtgattttt 4157455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 12797282 - 12797378
Alignment:
Q  27 gaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgattttt 123  Q
    |||||||  ||| |||||||||||| | |||||||||||| |||| |  ||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  12797282 gaagcacgaacattcctcggattagacttgtcccggtgtcagacatgtatcgtgtccgacaccgacacttgtaattacactgaattatgtgattttt 12797378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 53381530 - 53381602
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtc-gtgtccgacaccgacac 94  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||    
T  53381530 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggatacgcgtcagtgtccgacaccgacac 53381602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 66 - 154
Target Start/End: Original strand, 54580006 - 54580094
Alignment:
Q  66 cggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttttacaaattctttgctgtgtcagtgtccgtgtc 154  Q
    |||||||| |||||||||||||||||||| | ||||||||||||||| |||||||||| |||||| || | |||||||| |||||||||    
T  54580006 cggacacgtgtcgtgtccgacaccgacacttataattacactgaattatgtgattttttcaaattattagttgtgtcagcgtccgtgtc 54580094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 24343635 - 24343560
Alignment:
Q  20 gatctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtc-gtgtccgacaccgacac 94  Q
    |||||||||||||| |||||||||| || ||||||||||||||||||||||||||||| ||||| |||||||||||    
T  24343635 gatctatgaagcacggacactcctcagaataggcgtgtcccggtgtcggacacgcgtcggtgtcggacaccgacac 24343560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 23 - 122
Target Start/End: Complemental strand, 35161155 - 35161056
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||||| ||||||  |||||||||| |||| ||||||||||||||| |||||||||||| | || || | ||||||||||||||| |||||||||    
T  35161155 ctatgaagcacggacacttttcggattaggtgtgttccggtgtcggacacgtgtcgtgtccgactctgatacttataattacactgaattatgtgatttt 35161056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 190
Target Start/End: Complemental strand, 36635452 - 36635268
Alignment:
Q  20 gatctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacac-----cg-acacatgtaattacactgaattt 113  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||| ||| || |||||||| |||||     || |||||| |||||||||||||||     
T  36635452 gatctatgaagcacggacactcttcggattaggcgtgtcccggtgtctgacgcgtgtcgtgtctgacactcacacgaacacatataattacactgaatta 36635353  T
Q  114 tgtgatttttacaaattct--------ttgctgtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    |||||||||  |||||| |        |||  ||||||||||||| ||||| ||||||||  |||||| ||||| ||||||||||    
T  36635352 tgtgattttctcaaattattagtggtgttggcgtgtcagtgtccgagtcgtgtccggtgtctgtgtccttatccatgcttcatag 36635268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 188
Target Start/End: Original strand, 30982808 - 30982988
Alignment:
Q  24 tatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtc-----------cgacaccgacacatgtaattacactgaatt 112  Q
    |||||||||| ||||||| | ||||||||||||||||||||||||||||| ||||||||           |||||||||||| | ||||||||||||| |    
T  30982808 tatgaagcacggacactctttggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacacgacaccgacacttataattacactgaaat 30982907  T
Q  113 ttgtgatttttacaaattctttgctgtg-----tcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcat 188  Q
     |||||||||  |||||  || || |||     || |||||||||||||||||||||| | ||| ||||||||||||||||    
T  30982908 atgtgattttctcaaatcattagcggtggcgtgtctgtgtccgtgtcgtatccggtgtccatgttcgtatccgtgcttcat 30982988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 42 - 128
Target Start/End: Original strand, 40179595 - 40179681
Alignment:
Q  42 ctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttttacaaa 128  Q
    |||||||||||||||||  ||||||| ||| | |||||||||||||||||| ||| ||||||||||||||| |||||||||| ||||    
T  40179595 ctcggattaggcgtgtcatggtgtcgaacatgtgtcgtgtccgacaccgacgcatataattacactgaattatgtgattttttcaaa 40179681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 36 - 190
Target Start/End: Original strand, 21873315 - 21873478
Alignment:
Q  36 acactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac---------atgtaattacactgaattttgtgatttttaca 126  Q
    |||||||| ||||||| ||||||||||||||||||||| |||  |||||| ||| ||||         |  ||||| ||||||||| |||||||||  ||    
T  21873315 acactccttggattagacgtgtcccggtgtcggacacgtgtcacgtccgagaccaacacgataccggcacataatttcactgaattatgtgattttatca 21873414  T
Q  127 aattctttgctgtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    |||| ||||| ||||||||||||||||||| |||  ||| |||||| |||||||||||| ||||    
T  21873415 aattatttgcagtgtcagtgtccgtgtcgtgtccaatgtccgtgtctgtatccgtgcttaatag 21873478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 36 - 190
Target Start/End: Original strand, 21929176 - 21929339
Alignment:
Q  36 acactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac---------atgtaattacactgaattttgtgatttttaca 126  Q
    |||||||| ||||||| ||||||||||||||||||||| |||  |||||| ||| ||||         |  ||||| ||||||||| |||||||||  ||    
T  21929176 acactccttggattagacgtgtcccggtgtcggacacgtgtcacgtccgagaccaacacgataccggcacataatttcactgaattatgtgattttatca 21929275  T
Q  127 aattctttgctgtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    |||| ||||| ||||||||||||||||||| |||  ||| |||||| |||||||||||| ||||    
T  21929276 aattatttgcagtgtcagtgtccgtgtcgtgtccaatgtccgtgtctgtatccgtgcttaatag 21929339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 26 - 142
Target Start/End: Complemental strand, 28084640 - 28084521
Alignment:
Q  26 tgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtc-gtgtc-cgacaccgacacatgtaattacactgaattttgtga-tttt 122  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||| |||   | | |||||| ||||| |||||||||| |||||| ||||| ||||    
T  28084640 tgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtcaccgacacgacacagacacttgtaattacattgaattatgtgattttt 28084541  T
Q  123 tacaaattctttgctgtgtc 142  Q
    | ||||||||| ||||||||    
T  28084540 ttcaaattcttagctgtgtc 28084521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 16184950 - 16184879
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    |||||||||||  ||||||||||||||||||||||||| |||||||||| || |||| | ||||||||||||    
T  16184950 ctatgaagcacaaacactcctcggattaggcgtgtcccagtgtcggacaggcatcgtatgcgacaccgacac 16184879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 19482798 - 19482727
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    |||||||||||  ||||||||||||||||| ||||||| |||||||||||| ||||||||| | ||||||||    
T  19482798 ctatgaagcacgaacactcctcggattaggtgtgtcccagtgtcggacacgtgtcgtgtccaataccgacac 19482727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 38846968 - 38847071
Alignment:
Q  39 ctcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttttacaaattctttgctg 138  Q
    |||||| |||||||  ||| | ||||||||||||| ||||| |||||||| ||||| ||||||||||||||||  | |||||||| |||||| || ||||    
T  38846968 ctcctcagattaggtatgttctggtgtcggacacgtgtcgtatccgacactgacacttgtaattacactgaataatatgattttttcaaattattagctg 38847067  T
Q  139 tgtc 142  Q
    ||||    
T  38847068 tgtc 38847071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 18513175 - 18513241
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtc-gtgtccgacac 88  Q
    ||||||||||| |||||||||| |||||||||||||| |||||||||||| |||| |||||||||||    
T  18513175 ctatgaagcacggacactcctcagattaggcgtgtcctggtgtcggacacacgtcggtgtccgacac 18513241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 24613630 - 24613700
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgaca 93  Q
    ||||||||||| ||||||||| ||||||| ||||||| |||||| |||||| |||||||| ||||||||||    
T  24613630 ctatgaagcacggacactcctaggattagacgtgtcctggtgtcagacacgtgtcgtgtctgacaccgaca 24613700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 29205589 - 29205527
Alignment:
Q  21 atctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtcc 83  Q
    |||||||||||||  ||||||||||||||||||||||||| |||||||||| | |||||||||    
T  29205589 atctatgaagcacgaacactcctcggattaggcgtgtcccagtgtcggacatgtgtcgtgtcc 29205527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 7012197 - 7012124
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtc-gtgtccgacaccgacaca 95  Q
    ||||||||||| ||||||||||| |||||| ||  |||||||||||| ||||||| ||||||||||||||||||    
T  7012197 ctatgaagcacggacactcctcgcattaggtgttccccggtgtcggatacgcgtcggtgtccgacaccgacaca 7012124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 11596297 - 11596399
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtc-cgacaccgacacatgtaattacactgaattttgtgattt 121  Q
    ||||||||||| |||||||||| |||||||||||||||| |||||||||       || | ||||||| |||| ||||||||||||||||| ||||||||    
T  11596297 ctatgaagcacggacactcctcagattaggcgtgtcccgatgtcggaca------atgacacgacacctacacttgtaattacactgaattatgtgattt 11596390  T
Q  122 ttacaaatt 130  Q
    || ||||||    
T  11596391 tttcaaatt 11596399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 142
Target Start/End: Original strand, 4672025 - 4672144
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||||| ||||||||| ||||||| | ||| || |||||| |||||  | || |||||||||||||||| ||  ||||||||||| ||| |||||    
T  4672025 ctatgaagcacagacactccttggattagacatgttccagtgtcgaacacgttttgtatccgacaccgacacatatagctacactgaattatgtaatttt 4672124  T
Q  123 tacaaattctttgctgtgtc 142  Q
      |||||| || ||||||||    
T  4672125 cccaaattattagctgtgtc 4672144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 139 - 190
Target Start/End: Complemental strand, 5111640 - 5111589
Alignment:
Q  139 tgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    ||||||||||| ||||||||||||||| |||| |||||||||||||||||||    
T  5111640 tgtcagtgtccatgtcgtatccggtgtccgtgcccgtatccgtgcttcatag 5111589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 5414101 - 5414172
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    ||||||||||| ||||||||| |||| ||| ||||||| ||||| |||||| |||||||||||||| |||||    
T  5414101 ctatgaagcacggacactccttggataaggtgtgtccctgtgtcagacacgtgtcgtgtccgacactgacac 5414172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 82 - 190
Target Start/End: Complemental strand, 15029825 - 15029715
Alignment:
Q  82 ccgacaccgacacatgtaattacactgaattttgtgatttttacaaattctttgctgtgtc--agtgtccgtgtcgtatccggtgttcgtgtccgtatcc 179  Q
    |||||||| |||||| ||||||||||||||| |||||| ||| |||||| || || |||||   ||||| ||||||| |||||| | | |||||||||||    
T  15029825 ccgacaccaacacatataattacactgaattatgtgatattttcaaattattagcagtgtctgcgtgtcagtgtcgtgtccggtctccatgtccgtatcc 15029726  T
Q  180 gtgcttcatag 190  Q
     ||||||||||    
T  15029725 ctgcttcatag 15029715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 20633481 - 20633426
Alignment:
Q  138 gtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatagcta 193  Q
    |||||||||||||| |||| || ||||| |||||||||||||||||||||||||||    
T  20633481 gtgtcagtgtccgtatcgtgtctggtgtccgtgtccgtatccgtgcttcatagcta 20633426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 22234819 - 22234890
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    |||||||||||  ||||| ||||||||||  |||||| ||||||||||||| |||||||| |||||||||||    
T  22234819 ctatgaagcacgaacacttctcggattagctgtgtcctggtgtcggacacgtgtcgtgtcagacaccgacac 22234890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 119 - 190
Target Start/End: Complemental strand, 28470412 - 28470341
Alignment:
Q  119 tttttacaaattctttgctgtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    ||||| |||||| || | |||||||||||| ||||| |||||||||| ||| ||||||||||||||||||||    
T  28470412 ttttttcaaattattagttgtgtcagtgtctgtgtcatatccggtgtccgtatccgtatccgtgcttcatag 28470341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 26 - 120
Target Start/End: Original strand, 46715416 - 46715511
Alignment:
Q  26 tgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtc-gtgtccgacaccgacacatgtaattacactgaattttgtgatt 120  Q
    ||||||||  |||||||||||||||| | ||| ||||||||||||||||| | ||||||||||| |||| || ||| |||| |||||| |||||||    
T  46715416 tgaagcacgaacactcctcggattagacatgtgccggtgtcggacacgcggcagtgtccgacacagacaaatataactacattgaattatgtgatt 46715511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 94
Target Start/End: Complemental strand, 30838335 - 30838269
Alignment:
Q  28 aagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    |||||| |||||||||||| |||||||||||  ||||||||||||| |||| ||||||||| |||||    
T  30838335 aagcacggacactcctcgggttaggcgtgtcttggtgtcggacacgtgtcgcgtccgacactgacac 30838269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 37203374 - 37203324
Alignment:
Q  20 gatctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggac 70  Q
    |||||||||||||| |||||| |||||||||| ||||||||||||||||||    
T  37203374 gatctatgaagcacggacacttctcggattagacgtgtcccggtgtcggac 37203324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 189
Target Start/End: Original strand, 47191049 - 47191099
Alignment:
Q  139 tgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcata 189  Q
    |||| ||||||||||||||||||||||||||||| |||||| |||||||||    
T  47191049 tgtcggtgtccgtgtcgtatccggtgttcgtgtctgtatccatgcttcata 47191099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 44081639 - 44081692
Alignment:
Q  137 tgtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    ||||||||||||| |||||| |||| |||||||||||||||| |||||||||||    
T  44081639 tgtgtcagtgtccttgtcgtgtccgatgttcgtgtccgtatcggtgcttcatag 44081692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 944602 - 944674
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtc-gtgtccgacaccgacac 94  Q
    ||||||||| | || ||||||| ||||||| |||||||||||||||||||||||| |||| |||||| |||||    
T  944602 ctatgaagctcagagactcctcagattaggtgtgtcccggtgtcggacacgcgtctgtgttcgacactgacac 944674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 139
Target Start/End: Original strand, 12895055 - 12895172
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtc-----cgacaccgacacatgtaattacactgaattttgtg 117  Q
    ||||||||||| ||||||| ||| ||||||||| ||||||||||||    | ||||||||     |||||||||||| |||||||||  |||||| ||||    
T  12895055 ctatgaagcacggacactcttcgaattaggcgtatcccggtgtcgg----gtgtcgtgtccgacacgacaccgacacttgtaattactttgaattatgtg 12895150  T
Q  118 atttttacaaattctttgctgt 139  Q
    |||||| |||||| || |||||    
T  12895151 attttttcaaattattagctgt 12895172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 22440559 - 22440607
Alignment:
Q  25 atgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacg 73  Q
    ||||||||| |||||||||||||||||||||||||  ||||||||||||    
T  22440559 atgaagcacggacactcctcggattaggcgtgtcctagtgtcggacacg 22440607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 123
Target Start/End: Complemental strand, 40481743 - 40481655
Alignment:
Q  40 tcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacaca-----tgtaattacactgaattttgtgattttt 123  Q
    ||||||||||| | ||||  |||||||||||||| ||||||||| ||||||||| |     ||||||||||||||||| ||||||||||    
T  40481743 tcctcggattaagtgtgtttcggtgtcggacacgtgtcgtgtccaacaccgacataacacttgtaattacactgaattatgtgattttt 40481655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 123
Target Start/End: Original strand, 2625959 - 2626055
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||||| || |||||| | ||||||||||||| | ||||||||||||| | |    | ||||||||| ||||||||||| ||||| |||||||||    
T  2625959 ctatgaagcacggatactccttgaattaggcgtgtcctgatgtcggacacgcggcat----ggcaccgacacgtgtaattacaccgaattatgtgatttt 2626054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 62
Target Start/End: Original strand, 5775304 - 5775343
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccgg 62  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  5775304 ctatgaagcacggacactcctcggattaggcgtgtcccgg 5775343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 128
Target Start/End: Original strand, 6879459 - 6879510
Alignment:
Q  77 cgtgtccgacaccgacacatgtaattacactgaattttgtgatttttacaaa 128  Q
    |||||||||||||||||| |||||||||||| |||| |||||||||| ||||    
T  6879459 cgtgtccgacaccgacacttgtaattacacttaattatgtgatttttccaaa 6879510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 165
Target Start/End: Complemental strand, 9996936 - 9996817
Alignment:
Q  46 gattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttttacaaattctttgctgtgtcagt 145  Q
    ||||||| |||| || |||||||||||| ||  |||| |||||||| |||| |||||| |||||||| |||||||||  |||||| ||  | ||||| ||    
T  9996936 gattaggtgtgttccagtgtcggacacgtgttatgtctgacaccgagacatataattatactgaattatgtgattttctcaaattattgtcagtgtcggt 9996837  T
Q  146 gtccgtgtcgtatccggtgt 165  Q
    ||| ||||||| | ||||||    
T  9996836 gtctgtgtcgtgttcggtgt 9996817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 15724483 - 15724554
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    |||||||||||  | ||||||||||||||||||||   |||||| |||||| || |||||||||||||||||    
T  15724483 ctatgaagcacataaactcctcggattaggcgtgttttggtgtctgacacgtgttgtgtccgacaccgacac 15724554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 78
Target Start/End: Complemental strand, 17876285 - 17876230
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcg 78  Q
    ||||||||||| ||||||||| |||||||| |||||| ||||||||||| ||||||    
T  17876285 ctatgaagcacagacactccttggattaggtgtgtcctggtgtcggacaagcgtcg 17876230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 122
Target Start/End: Original strand, 19097835 - 19097933
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||||| ||||||| | || | ||||||||||| ||||| |||||| ||| ||| ||||||||||| || |||||| ||||||||  ||||||||    
T  19097835 ctatgaagcacagacactctttgg-taaggcgtgtccccgtgtcagacacgtgtcatgttcgacaccgacaaatataattatactgaattacgtgatttt 19097933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 150
Target Start/End: Original strand, 30103297 - 30103423
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||||  |||||||||||||||||  |||||| | |||| ||||   |||||||  ||||||||||||| | |||||||| |||| |||||||||    
T  30103297 ctatgaagcagagacactcctcggattagatgtgtcctgatgtcagacatatgtcgtgtttgacaccgacacatatgattacact-aattatgtgatttt 30103395  T
Q  123 tacaaattctttgctgtgtcagtgtccg 150  Q
      |||||| ||||  |||| ||||||||    
T  30103396 ctcaaattatttggagtgttagtgtccg 30103423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 40784072 - 40784029
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtc 66  Q
    ||||||||||| |||||||||||||||||| |||||||||||||    
T  40784072 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtc 40784029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 3064868 - 3064926
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgt 81  Q
    ||||||||||| |||||||||||||||||||||||| | | |||||||| | |||||||    
T  3064868 ctatgaagcacggacactcctcggattaggcgtgtctcagagtcggacatgtgtcgtgt 3064926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 84
Target Start/End: Complemental strand, 18966629 - 18966567
Alignment:
Q  22 tctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccg 84  Q
    |||||||||||| |||||||||  |||||||||| ||||| ||||||||||| || |||||||    
T  18966629 tctatgaagcacggacactccttagattaggcgtatcccgttgtcggacacgtgttgtgtccg 18966567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 77
Target Start/End: Complemental strand, 32910670 - 32910628
Alignment:
Q  35 gacactcctcggattaggcgtgtcccggtgtcggacacgcgtc 77  Q
    ||||||||||||||||||||||||  |||||||||||||||||    
T  32910670 gacactcctcggattaggcgtgtcatggtgtcggacacgcgtc 32910628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 848080 - 848015
Alignment:
Q  24 tatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacacc 89  Q
    |||||| ||| ||||||||| |||||||| ||||||||||||  ||||||  ||||||||||||||    
T  848080 tatgaaacacggacactccttggattaggtgtgtcccggtgttcgacacgtttcgtgtccgacacc 848015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 3712458 - 3712503
Alignment:
Q  28 aagcactgacactcctcggattaggcgtgtcccggtgtcggacacg 73  Q
    |||||| |||||||||| |||||| |||||||||||||||||||||    
T  3712458 aagcacggacactcctcagattagccgtgtcccggtgtcggacacg 3712503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 19312463 - 19312394
Alignment:
Q  25 atgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    ||||| ||| |||||| ||| |||||| |||||| |||||||||||||| ||||| ||||||| ||||||    
T  19312463 atgaaacacggacacttctcagattagacgtgtctcggtgtcggacacgtgtcgtatccgacaacgacac 19312394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 72
Target Start/End: Complemental strand, 30094132 - 30094083
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacac 72  Q
    ||||| ||||| ||||||| |||||||||||||||||||||||| |||||    
T  30094132 ctatgtagcacggacactcttcggattaggcgtgtcccggtgtccgacac 30094083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 32273459 - 32273524
Alignment:
Q  21 atctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgac 86  Q
    ||||||||||||| ||||||||| ||||| | |||||||| || ||||| ||| ||||||||||||    
T  32273459 atctatgaagcaccgacactccttggatttgtcgtgtccccgtatcggatacgtgtcgtgtccgac 32273524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 123
Target Start/End: Original strand, 36509031 - 36509132
Alignment:
Q  22 tctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgattt 121  Q
    |||||||||||   | ||| |||||||||  ||||||| ||| || |||||| |||| ||||||| ||||||||| ||||||||||  ||| ||||||||    
T  36509031 tctatgaagcatgaatacttctcggattaaacgtgtcctggtatcagacacgtgtcgcgtccgacgccgacacatataattacacttgattatgtgattt 36509130  T
Q  122 tt 123  Q
    ||    
T  36509131 tt 36509132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 11931411 - 11931355
Alignment:
Q  22 tctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcg 78  Q
    |||||||||||| ||||||||  |||||||| |||||| ||||||||||| ||||||    
T  11931411 tctatgaagcacggacactccatggattaggtgtgtcctggtgtcggacatgcgtcg 11931355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 17425348 - 17425396
Alignment:
Q  24 tatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacac 72  Q
    |||||||||| |||||||||||||||||||||||||  ||||| |||||    
T  17425348 tatgaagcacagacactcctcggattaggcgtgtccttgtgtctgacac 17425396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 27706110 - 27706170
Alignment:
Q  27 gaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgaca 87  Q
    |||||||  ||| ||||| |||||||||||||||||| ||||| ||| |||||||||||||    
T  27706110 gaagcacgtacattcctcagattaggcgtgtcccggtatcggatacgtgtcgtgtccgaca 27706170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 40965389 - 40965341
Alignment:
Q  24 tatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacac 72  Q
    |||||||||| |||||||||| |||||||||||||  ||||||||||||    
T  40965389 tatgaagcaccgacactcctcagattaggcgtgtcttggtgtcggacac 40965341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 47264118 - 47264050
Alignment:
Q  21 atctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacacc 89  Q
    ||||||||||||| ||| ||| ||||||||||||||||| |||||| |||| | ||||| || ||||||    
T  47264118 atctatgaagcacagacgctcttcggattaggcgtgtcctggtgtcagacatgtgtcgtatctgacacc 47264050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 59
Target Start/End: Complemental strand, 4383484 - 4383449
Alignment:
Q  24 tatgaagcactgacactcctcggattaggcgtgtcc 59  Q
    |||||||||| |||||||||||||||||||||||||    
T  4383484 tatgaagcacggacactcctcggattaggcgtgtcc 4383449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 5922532 - 5922579
Alignment:
Q  24 tatgaagcactgacactcctcggattaggcgtgtcccggtgtcggaca 71  Q
    |||||||||  |||||||||| ||||||||||||||| ||||||||||    
T  5922532 tatgaagcagagacactcctcagattaggcgtgtcccagtgtcggaca 5922579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 94
Target Start/End: Complemental strand, 10133811 - 10133756
Alignment:
Q  40 tcctcggattaggcgtgtcccggtgtcggacacgcgtc-gtgtccgacaccgacac 94  Q
    ||||| ||||||| |||||| ||||||||||||||||| ||||| |||||||||||    
T  10133811 tcctcagattaggtgtgtcctggtgtcggacacgcgtcagtgtctgacaccgacac 10133756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 19500787 - 19500858
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    ||||||||||| || |||||| |||||||||||| | |||| || ||  || ||||||||||||||||||||    
T  19500787 ctatgaagcacggatactccttggattaggcgtgcctcggtatcagaggcgtgtcgtgtccgacaccgacac 19500858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 61
Target Start/End: Complemental strand, 28470485 - 28470446
Alignment:
Q  22 tctatgaagcactgacactcctcggattaggcgtgtcccg 61  Q
    |||||||||||| ||||||||||||||||||| |||||||    
T  28470485 tctatgaagcacggacactcctcggattaggcatgtcccg 28470446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 62
Target Start/End: Complemental strand, 30299048 - 30299009
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccgg 62  Q
    ||||||||||| ||||||||||||||||| ||||||||||    
T  30299048 ctatgaagcacggacactcctcggattagacgtgtcccgg 30299009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 62
Target Start/End: Complemental strand, 30327916 - 30327877
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccgg 62  Q
    ||||||||||| ||||||||||||||||| ||||||||||    
T  30327916 ctatgaagcacggacactcctcggattagacgtgtcccgg 30327877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 123
Target Start/End: Original strand, 482185 - 482278
Alignment:
Q  25 atgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgattttt 123  Q
    ||||||||  ||||||| ||||||||| ||||| | |||||| ||||||     |||||||||||||||  | ||||||||||||||| |||| |||||    
T  482185 atgaagcatggacactcatcggattagacgtgttcaggtgtcagacacg-----tgtccgacaccgacagttataattacactgaattatgtgtttttt 482278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 941364 - 941310
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtc 77  Q
    ||||||||||| |||| || |||||||||| |||||| | |||||||||||||||    
T  941364 ctatgaagcacggacagtcttcggattaggtgtgtcctgatgtcggacacgcgtc 941310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 3144585 - 3144658
Alignment:
Q  21 atctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcg-tcgtgtccgacaccgacac 94  Q
    ||||||||||||| |||||| ||||||||||| ||||| | |||| ||||||||| | ||||| |||||||||||    
T  3144585 atctatgaagcacggacacttctcggattaggtgtgtctc-gtgttggacacgcgttggtgtctgacaccgacac 3144658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 122
Target Start/End: Original strand, 7214466 - 7214561
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||||||  ||| || ||||||||||| | ||||||||||||||| | |||||    ||||||||| ||| |||||||| | |||| |||||||||    
T  7214466 ctatgaagcacaaacaatcatcggattaggcatttcccggtgtcggacatgtgtcgt----gacaccgacgcatataattacattaaattatgtgatttt 7214561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 12324038 - 12323968
Alignment:
Q  24 tatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    |||||||||| |||||||||||||| ||| |||| || ||| |  ||||| ||| ||||||||||||||||    
T  12324038 tatgaagcacggacactcctcggataaggtgtgttcccgtgccacacacgtgtcatgtccgacaccgacac 12323968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 73
Target Start/End: Original strand, 12884347 - 12884397
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacg 73  Q
    ||||||||||| ||||||||||||||||| |||| |||| ||||| |||||    
T  12884347 ctatgaagcacggacactcctcggattagacgtgccccgatgtcgaacacg 12884397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 114
Target Start/End: Original strand, 20950420 - 20950458
Alignment:
Q  76 tcgtgtccgacaccgacacatgtaattacactgaatttt 114  Q
    ||||||| ||||||||||||| |||||||||||||||||    
T  20950420 tcgtgtctgacaccgacacatataattacactgaatttt 20950458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 27706240 - 27706286
Alignment:
Q  138 gtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgct 184  Q
    |||||||||||| |||||| || ||||| ||||||||||||||||||    
T  27706240 gtgtcagtgtccctgtcgtgtctggtgtccgtgtccgtatccgtgct 27706286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 73
Target Start/End: Original strand, 39507059 - 39507109
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacg 73  Q
    |||||||||| | |||||||||||| |||| ||||| ||||||||||||||    
T  39507059 ctatgaagcagtaacactcctcggaataggtgtgtctcggtgtcggacacg 39507109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 187
Target Start/End: Complemental strand, 847947 - 847898
Alignment:
Q  138 gtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttca 187  Q
    ||||||||||| ||||||| ||||| || | |||||||||||||||||||    
T  847947 gtgtcagtgtctgtgtcgtgtccggggtccatgtccgtatccgtgcttca 847898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 130
Target Start/End: Original strand, 6485613 - 6485658
Alignment:
Q  85 acaccgacacatgtaattacactgaattttgtgatttttacaaatt 130  Q
    |||||||||| |||||||||||| |||| |||||||||| ||||||    
T  6485613 acaccgacacttgtaattacactaaattatgtgattttttcaaatt 6485658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 122
Target Start/End: Original strand, 8402705 - 8402781
Alignment:
Q  45 ggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||| ||||| | ||||||||| | |||||||| ||||| || |||| ||||||||||||||| | |||||||    
T  8402705 ggattaggcatgtcctg-tgtcggacaagtgtcgtgtctgacactgagacatataattacactgaattatatgatttt 8402781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 122
Target Start/End: Complemental strand, 13307958 - 13307897
Alignment:
Q  61 ggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||| |||||| ||||||||||||||| |||| ||| |||||| |||||| ||| |||||    
T  13307958 ggtgtctgacacgtgtcgtgtccgacaccaacacttgtgattacattgaattatgtcatttt 13307897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 18575984 - 18576033
Alignment:
Q  24 tatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacg 73  Q
    ||||||||||  |||||| ||| ||||||||||||||||| |||||||||    
T  18575984 tatgaagcacatacactcatcgaattaggcgtgtcccggtttcggacacg 18576033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 34589645 - 34589714
Alignment:
Q  25 atgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    ||||||||| |  ||||||||||||||||||| | ||||||| || |||  ||||||||||||| |||||    
T  34589645 atgaagcacaggtactcctcggattaggcgtgcctcggtgtcagatacgtatcgtgtccgacactgacac 34589714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 5654503 - 5654567
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgaca 87  Q
    |||||||||||  | |||| ||||||||||||| | ||||||||||| |||  ||||||||||||    
T  5654503 ctatgaagcacaaatactcttcggattaggcgtattccggtgtcggatacgtatcgtgtccgaca 5654567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 10499225 - 10499261
Alignment:
Q  21 atctatgaagcactgacactcctcggattaggcgtgt 57  Q
    ||||||||||||| |||| ||||||||||||||||||    
T  10499225 atctatgaagcacggacaatcctcggattaggcgtgt 10499261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 12708261 - 12708213
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggaca 71  Q
    ||||||||||| ||| ||||||||||||||||||| ||| |||| ||||    
T  12708261 ctatgaagcacggacgctcctcggattaggcgtgttccgatgtccgaca 12708213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 122
Target Start/End: Complemental strand, 13117493 - 13117449
Alignment:
Q  78 gtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||||||||||| ||| |||||| |||||||||| |||||    
T  13117493 gtgtccgacaccgacacttgtgattacattgaattttgtcatttt 13117449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 119
Target Start/End: Complemental strand, 13783340 - 13783304
Alignment:
Q  83 cgacaccgacacatgtaattacactgaattttgtgat 119  Q
    |||||||| ||||| ||||||||||||||||||||||    
T  13783340 cgacaccggcacatataattacactgaattttgtgat 13783304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #103
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 122
Target Start/End: Complemental strand, 16189773 - 16189729
Alignment:
Q  78 gtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||| ||||||||||  ||||||||||||||| |||||||||    
T  16189773 gtgtccgtcaccgacacacataattacactgaattatgtgatttt 16189729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #104
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 18844423 - 18844459
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcc 59  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  18844423 ctatgaagcacggacacttctcggattaggcgtgtcc 18844459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #105
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 20521801 - 20521857
Alignment:
Q  39 ctcctcggattaggcgtgtcccggtgtcggacacgcgtc-gtgtccgacaccgacac 94  Q
    ||||| ||||||||||||||  ||| ||||||| ||||| |||||||||||||||||    
T  20521801 ctccttggattaggcgtgtcatggtttcggacatgcgtcggtgtccgacaccgacac 20521857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #106
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 94
Target Start/End: Original strand, 20743210 - 20743278
Alignment:
Q  27 gaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtc-gtgtccgacaccgacac 94  Q
    ||||||| ||||||| |||||||||  |||| ||||||||||||||| ||| ||||| |||| ||||||    
T  20743210 gaagcacggacactcatcggattagatgtgttccggtgtcggacacgtgtcggtgtctgacatcgacac 20743278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #107
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 24613774 - 24613826
Alignment:
Q  138 gtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    |||||||||| |||||||| ||| |||| | ||||||||||| ||||||||||    
T  24613774 gtgtcagtgttcgtgtcgtgtccagtgtccatgtccgtatccatgcttcatag 24613826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #108
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 123
Target Start/End: Complemental strand, 30299006 - 30298966
Alignment:
Q  83 cgacaccgacacatgtaattacactgaattttgtgattttt 123  Q
    |||||||||||| ||||||||||||||||| ||| ||||||    
T  30299006 cgacaccgacacttgtaattacactgaattatgtcattttt 30298966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #109
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 123
Target Start/End: Complemental strand, 30327874 - 30327834
Alignment:
Q  83 cgacaccgacacatgtaattacactgaattttgtgattttt 123  Q
    |||||||||||| ||||||||||||||||| ||| ||||||    
T  30327874 cgacaccgacacttgtaattacactgaattatgtcattttt 30327834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #110
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 34515807 - 34515858
Alignment:
Q  19 cgatctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggaca 71  Q
    ||||||||||| ||| ||||||||| ||||||| |||||||| ||||||||||    
T  34515807 cgatctatgaatcacagacactccttggattagacgtgtccc-gtgtcggaca 34515858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #111
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 190
Target Start/End: Complemental strand, 37203315 - 37203222
Alignment:
Q  91 acacatgtaattacactgaattttgtgatttttacaaattctttgctgtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    |||| |||||||||||| |||| ||| |||||| |||||| || || ||||| |||||      || |||||||| ||||||| ||||||||||||||||    
T  37203315 acacttgtaattacactaaattatgtcattttttcaaattattagccgtgtctgtgtc------gtgtccggtgtccgtgtccatatccgtgcttcatag 37203222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 95; Significance: 1e-46; HSPs: 94)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 23 - 181
Target Start/End: Complemental strand, 28715414 - 28715256
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||||||  ||||| |||| ||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||| ||| |||||    
T  28715414 ctatgaagcacgtacacttctcgaattaggcgtgtcccggtgtcgaacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtcatttt 28715315  T
Q  123 tacaaattctttgctgtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgt 181  Q
    | |||||| || || |||||||||||||| |||| |||||||| |||||||||||||||    
T  28715314 ttcaaattattagccgtgtcagtgtccgtatcgtgtccggtgtccgtgtccgtatccgt 28715256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 21 - 130
Target Start/End: Complemental strand, 34595255 - 34595146
Alignment:
Q  21 atctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatt 120  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||| |||||||    
T  34595255 atctatgaagcacggacactcctcggattaggtgtgtcccggtgtcagacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgatt 34595156  T
Q  121 tttacaaatt 130  Q
    ||| ||||||    
T  34595155 ttttcaaatt 34595146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 23 - 195
Target Start/End: Original strand, 8776908 - 8777093
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggaca-----cgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtg 117  Q
    ||||||||||| |||||||||||||||||| ||||| ||||||||||||     || ||||||||||||||| |||| ||||||||||||||||||||||    
T  8776908 ctatgaagcacggacactcctcggattaggtgtgtctcggtgtcggacacgtgtcgtgtcgtgtccgacaccaacacttgtaattacactgaattttgtg 8777007  T
Q  118 atttttacaaattctttgct--------gtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatagctatc 195  Q
    |||||| |||||| || | |        ||||||||||||||||||| |||| ||| |||||||||||||||||||||||| ||||    
T  8777008 attttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccgttgtccgtgtccgtatccgtgcttcatagatatc 8777093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 23 - 123
Target Start/End: Complemental strand, 28152217 - 28152117
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||||||  |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||    
T  28152217 ctatgaagcacgaacactcctcggattaggcctgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 28152118  T
Q  123 t 123  Q
    |    
T  28152117 t 28152117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 21 - 190
Target Start/End: Original strand, 9107297 - 9107485
Alignment:
Q  21 atctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtc-----------cgacaccgacacatgtaattacactga 109  Q
    ||||||||||||| | |||||||||||||||| ||||||||||||||||||| ||| |||||           |||||||||||| ||||||||||||||    
T  9107297 atctatgaagcacgggcactcctcggattaggtgtgtcccggtgtcggacacacgttgtgtccgacaccgacacgacaccgacacttgtaattacactga 9107396  T
Q  110 attttgtgatttttacaaattctttgctgtgtc--------agtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    |||||||||||||| |||||| || ||||||||        |||||||||||||| |||||||| |||||| |||||||||||||||||    
T  9107397 attttgtgattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtcgtgtccggtgtccgtgtcagtatccgtgcttcatag 9107485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 24 - 142
Target Start/End: Original strand, 17841530 - 17841648
Alignment:
Q  24 tatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgattttt 123  Q
    |||||||||| |||||||||||||||||||||||| | |||||||||||  |||||||||||||||| ||| |||||||||||| |||| ||||||||||    
T  17841530 tatgaagcacggacactcctcggattaggcgtgtctcagtgtcggacacatgtcgtgtccgacaccgtcacttgtaattacactaaattatgtgattttt 17841629  T
Q  124 acaaattctttgctgtgtc 142  Q
     |||||| || ||||||||    
T  17841630 tcaaattattagctgtgtc 17841648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 22 - 189
Target Start/End: Complemental strand, 7378099 - 7377930
Alignment:
Q  22 tctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgattt 121  Q
    |||||||||||| |||||| ||| |||||| |||||||||||||||||  |  |||||||||||||||||||||| |||||||| |||||| ||||||||    
T  7378099 tctatgaagcacggacacttctcagattagccgtgtcccggtgtcggatgcatgtcgtgtccgacaccgacacatataattacattgaattatgtgattt 7378000  T
Q  122 ttacaaattctttgctgtgtc--agtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcata 189  Q
    |  |||||| || || |||||   ||||| |||| || ||||||||  | ||||||||||||||||||||    
T  7377999 tctcaaatttttagcggtgtcggggtgtctgtgttgtgtccggtgtctgggtccgtatccgtgcttcata 7377930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 23 - 189
Target Start/End: Complemental strand, 16766827 - 16766642
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccg-----------acacatgtaattacactgaat 111  Q
    ||||||||||| |||| || ||||||||||||||||||||||||||||||| || |||||||||||||           |||| ||||||||||||||||    
T  16766827 ctatgaagcacggacattcttcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacacgacaccgacacttgtaattacactgaat 16766728  T
Q  112 tttgtgatttttacaaattctttgct--------gtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcata 189  Q
    | |||||||||| |||||| || |||        |||||||||||| |||||| |||||||| ||||||||||||| |||||||||    
T  16766727 tatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtccggtgtccgtgtccgtatccatgcttcata 16766642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 23 - 142
Target Start/End: Original strand, 1191643 - 1191759
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||||| |||  ||||||||||||| ||||   ||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||||| |||    
T  1191643 ctatgaagcacagacggtcctcggattaggtgtgt---ggtgtcggacacgcgtcgtgtccaacatcgacacttgtaattacactgaattttgtgaattt 1191739  T
Q  123 tacaaattctttgctgtgtc 142  Q
    | |||||| || ||||||||    
T  1191740 ttcaaattattagctgtgtc 1191759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 23 - 147
Target Start/End: Complemental strand, 4878061 - 4877937
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtga-ttt 121  Q
    ||||||||||| ||||||||||||||||||||||||| | ||||||||| | |||||||||||||||||||| |||||||| ||| |||| ||||| |||    
T  4878061 ctatgaagcacggacactcctcggattaggcgtgtcctg-tgtcggacatgtgtcgtgtccgacaccgacacttgtaattatacttaattatgtgacttt 4877963  T
Q  122 ttacaaattctttgctgtgtcagtgt 147  Q
    || |||||| || |||||||| ||||    
T  4877962 tttcaaattattagctgtgtcggtgt 4877937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 26 - 123
Target Start/End: Original strand, 32978842 - 32978939
Alignment:
Q  26 tgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgattttt 123  Q
    |||||||| ||||||||| ||||||| ||||||||||||||||||| | |||||||||||||||||||| |||||||||||| |||| |||| |||||    
T  32978842 tgaagcacggacactccttggattagacgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacacttaattatgtgtttttt 32978939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 21 - 190
Target Start/End: Original strand, 5970035 - 5970217
Alignment:
Q  21 atctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacaca-----------tgtaattacactga 109  Q
    ||||||||||||  | ||||||||||||| ||||||||||| ||||||| | | ||||||||||||||||||||            ||||||||||||||    
T  5970035 atctatgaagcatagtcactcctcggattgggcgtgtcccgatgtcggaaatgtgtcgtgtccgacaccgacacgacacccacatttgtaattacactga 5970134  T
Q  110 attttgtgatttttacaaattctttgctgtgtca--gtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    ||| |||||||||| |||||| ||  |||||||   ||||||||||| | |||||||| |||||||||||| |||||||||||    
T  5970135 attatgtgattttttcaaattattaactgtgtcgacgtgtccgtgtcatgtccggtgtccgtgtccgtatctgtgcttcatag 5970217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 23 - 123
Target Start/End: Complemental strand, 24645600 - 24645500
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||||| ||||||| ||||||||| ||||||  ||||||||||||| |||||||| ||||||||||| ||||| || |||||||| |||||||||    
T  24645600 ctatgaagcacagacactcttcggattagacgtgtcttggtgtcggacacgtgtcgtgtctgacaccgacacttgtaactatactgaattatgtgatttt 24645501  T
Q  123 t 123  Q
    |    
T  24645500 t 24645500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 6898221 - 6898328
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||||||  |||||| |||||||||||||||  |||||| |||||||| ||||||||||||||||||| |||||||||||| |||| ||| ||||     
T  6898221 ctatgaagcacgaacactcatcggattaggcgtgtttcggtgttggacacgcttcgtgtccgacaccgacacttgtaattacacttaattatgtaatttg 6898320  T
Q  123 tacaaatt 130  Q
    | ||||||    
T  6898321 ttcaaatt 6898328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 16833427 - 16833320
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||| || ||||||||||||||| || |||||| |||||||||| || ||||||||  |||||||||| ||||||||||||||| | |||||||||    
T  16833427 ctatgaagtacagacactcctcggattcggtgtgtcctggtgtcggacgcgtgtcgtgtctaacaccgacacttgtaattacactgaagtatgtgatttt 16833328  T
Q  123 tacaaatt 130  Q
    | ||||||    
T  16833327 ttcaaatt 16833320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 25 - 122
Target Start/End: Original strand, 7265535 - 7265632
Alignment:
Q  25 atgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||| ||| ||||||||||||||| | | ||||||||||||| |  | ||||||||||||||||||| ||||||||||||||| |||||||||    
T  7265535 atgaagcacggacgctcctcggattaggcatattccggtgtcggacatgtattgtgtccgacaccgacacatataattacactgaattatgtgatttt 7265632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 25 - 188
Target Start/End: Complemental strand, 12696446 - 12696277
Alignment:
Q  25 atgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacacc-----gacacatgtaattacactgaattttgtgat 119  Q
    ||||||||| ||||||||| |||| ||| ||||||||||||| |||||| ||||||||||||||      ||||| ||||||||||||||||| ||| ||    
T  12696446 atgaagcacagacactccttggataaggtgtgtcccggtgtcagacacgtgtcgtgtccgacacgacactgacacttgtaattacactgaattatgtaat 12696347  T
Q  120 ttttacaaattctttgctgtgtc--agtgtccgtgt-cgtatccggtgttcgtgtccgtatccgtgcttcat 188  Q
    |||| |||||| || ||||||||   ||||| |||| ||| ||  |||| ||||||||||||||||||||||    
T  12696346 tttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc--gtgtccgtgtccgtatccgtgcttcat 12696277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 23 - 142
Target Start/End: Original strand, 7977770 - 7977889
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||||||  ||||||||  ||||||||||||  || |||||||||   || ||||||||||||||||| ||||||||||||||||| ||| |||||    
T  7977770 ctatgaagcacgaacactccttagattaggcgtgtttcgttgtcggacatatgttgtgtccgacaccgacacttgtaattacactgaattatgtaatttt 7977869  T
Q  123 tacaaattctttgctgtgtc 142  Q
    | |||||| || ||||||||    
T  7977870 ttcaaattattagctgtgtc 7977889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 8365448 - 8365519
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    ||||||||||| || ||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||    
T  8365448 ctatgaagcacggagactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacac 8365519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 9658998 - 9658899
Alignment:
Q  24 tatgaagcactgacactcctcgga-ttaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||||| ||||||||| ||| |||||||||| |||||||| |||||| ||||||||  ||||||||| || ||||||||||||||| |||||||||    
T  9658998 tatgaagcacggacactccttggaattaggcgtgttccggtgtcagacacgtgtcgtgtctaacaccgacaaatataattacactgaattatgtgatttt 9658899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 10339054 - 10339125
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    ||||||||||| |||||||||| ||||||||||||||| |||||||||| | ||||||||||||||||||||    
T  10339054 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaccgacac 10339125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 33001229 - 33001336
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||||||  |||||| | ||||||||||| |  ||||||| |||||| |||||||||||||||||||||| |||||||| | |||| |||||||||    
T  33001229 ctatgaagcacaaacactctttggattaggcgtatttcggtgtcagacacgtgtcgtgtccgacaccgacacatataattacatttaattatgtgatttt 33001328  T
Q  123 tacaaatt 130  Q
    | ||||||    
T  33001329 ttcaaatt 33001336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 17327590 - 17327655
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacac 88  Q
    ||||||||||| |||||||||||||||||||||||||| ||||| |||||| ||||||||||||||    
T  17327590 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcagacacgtgtcgtgtccgacac 17327655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 24 - 130
Target Start/End: Complemental strand, 31385048 - 31384932
Alignment:
Q  24 tatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtc----------cgacaccgacacatgtaattacactgaattt 113  Q
    |||||||||| ||||||||| ||||||||||||||||||||| ||||||| ||||||||          |||||| ||||| |||||||||||||||||     
T  31385048 tatgaagcacggacactccttggattaggcgtgtcccggtgtaggacacgtgtcgtgtccaacactacacgacactgacacttgtaattacactgaatta 31384949  T
Q  114 tgtgatttttacaaatt 130  Q
    |||||||||| ||||||    
T  31384948 tgtgattttttcaaatt 31384932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 98 - 195
Target Start/End: Original strand, 34225824 - 34225921
Alignment:
Q  98 taattacactgaattttgtgatttttacaaattctttgctgtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatagctatc 195  Q
    ||||||||||||||| || ||||||| |||||| || | ||||||||||||| | |||| ||| |||| |||||||||||||||||||||||| ||||    
T  34225824 taattacactgaattatgcgattttttcaaattattagttgtgtcagtgtccttatcgtgtccagtgtccgtgtccgtatccgtgcttcatagatatc 34225921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 18 - 122
Target Start/End: Original strand, 13360308 - 13360411
Alignment:
Q  18 tcgatctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtg 117  Q
    |||| ||||||||||| ||||||| |||||||||||||||| | ||||||||||   || ||||| |||||||| |||| ||||||||||||||| ||||    
T  13360308 tcgaactatgaagcacggacactcttcggattaggcgtgtctcagtgtcggaca-ttgttgtgtctgacaccgaaacatataattacactgaattatgtg 13360406  T
Q  118 atttt 122  Q
    |||||    
T  13360407 atttt 13360411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 10770607 - 10770721
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgt--cgtgtc-----cgacaccgacacatgtaattacactgaattttg 115  Q
    ||||||||||| |||||||||| |||||||| ||||||||  ||||||||| ||  ||||||     |||||||||||| ||||||||||||||||| ||    
T  10770607 ctatgaagcacggacactcctcagattaggcatgtcccggcatcggacacgtgtgtcgtgtctgacacgacaccgacacttgtaattacactgaattatg 10770706  T
Q  116 tgatttttacaaatt 130  Q
    |||||||| ||||||    
T  10770707 tgattttttcaaatt 10770721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 28 - 123
Target Start/End: Original strand, 12627522 - 12627617
Alignment:
Q  28 aagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgattttt 123  Q
    ||||||||| | | ||||||||||| ||||| |||||||||||| | || |||||||||| |||||||| | ||||||||||||| ||||||||||    
T  12627522 aagcactgatatttctcggattaggagtgtctcggtgtcggacatgtgtggtgtccgacatcgacacatattattacactgaattatgtgattttt 12627617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 50 - 144
Target Start/End: Complemental strand, 7740733 - 7740639
Alignment:
Q  50 aggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttttacaaattctttgctgtgtcag 144  Q
    |||||||||| ||| ||||  ||| |||||||||||||| ||||||| |||||||||| |||||||||||||| ||||||| |||| ||| ||||    
T  7740733 aggcgtgtcctggtatcgggtacgtgtcgtgtccgacactgacacatataattacactcaattttgtgattttcacaaattatttgatgtatcag 7740639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 21 - 190
Target Start/End: Complemental strand, 8714112 - 8713929
Alignment:
Q  21 atctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac-----------atgtaattacactga 109  Q
    ||||||||||||  ||||||||||||||| ||||||||||| ||||||| | | ||||||||||||||||||||            ||||||||||||||    
T  8714112 atctatgaagcaaagacactcctcggattgggcgtgtcccgatgtcggaaatgtgtcgtgtccgacaccgacacgacacccacatttgtaattacactga 8714013  T
Q  110 attttgtga-tttttacaaattctttgctgtgtc--agtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    ||| ||||| ||||| |||||| ||  |||||||   |||||| |||| | |||||||| |||||||||||  |||||||||||    
T  8714012 attatgtgatttttttcaaattattaactgtgtcgacgtgtccatgtcatgtccggtgtccgtgtccgtatttgtgcttcatag 8713929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 94
Target Start/End: Complemental strand, 3209519 - 3209447
Alignment:
Q  22 tctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    ||||||||||||  |||||||||||||||||||||||| |||||||||| || ||||||| |||||| |||||    
T  3209519 tctatgaagcacaaacactcctcggattaggcgtgtccgggtgtcggacgcgtgtcgtgttcgacactgacac 3209447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 24 - 140
Target Start/End: Complemental strand, 31959268 - 31959161
Alignment:
Q  24 tatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgattttt 123  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||  ||||         ||||||| ||||||||||||| ||| ||||||||||    
T  31959268 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacatgtcg---------ccgacacttgtaattacactgcattatgtgattttt 31959178  T
Q  124 acaaattctttgctgtg 140  Q
     |||||| || ||||||    
T  31959177 tcaaattattagctgtg 31959161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 35 - 130
Target Start/End: Original strand, 853811 - 853906
Alignment:
Q  35 gacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttttacaaatt 130  Q
    ||||||| | |||||||||||||| |  ||||||||||  ||||| |||||||||||||| ||||||| |||| |||| |||||||||| ||||||    
T  853811 gacactcattggattaggcgtgtctctatgtcggacacatgtcgtatccgacaccgacacttgtaattgcacttaattatgtgattttttcaaatt 853906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 7248488 - 7248417
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    ||||||||||| ||||||||||||||| | ||||||||||||||||||||  || |||||| ||||||||||    
T  7248488 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcggacacatgttgtgtccaacaccgacac 7248417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 78 - 190
Target Start/End: Complemental strand, 7938180 - 7938060
Alignment:
Q  78 gtgtccgacaccgacacatgtaattacactgaattttgtgatttttacaaattctttgctgtgtc--------agtgtccgtgtcgtatccggtgttcgt 169  Q
    ||||| ||||||||||| | |||||||||| |||| | |||||||| |||||| || ||||||||        ||||||| |||||| |||||||| |||    
T  7938180 gtgtcggacaccgacacttataattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtccggtgtccgt 7938081  T
Q  170 gtccgtatccgtgcttcatag 190  Q
    |||||||||||||||||||||    
T  7938080 gtccgtatccgtgcttcatag 7938060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 9025448 - 9025562
Alignment:
Q  26 tgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttttac 125  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||           |||||||||||||| ||||||||||||||| |||||||||  |    
T  9025448 tgaagcacggacacttctcggattaggcgtgtcccggtgtcggaca-----------cgacaccgacacatataattacactgaattatgtgattttctc 9025536  T
Q  126 aaattctttgctgtgtcagtgtccgt 151  Q
    ||||| || || |||||  |||||||    
T  9025537 aaattattagcagtgtccatgtccgt 9025562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 139 - 190
Target Start/End: Complemental strand, 10294102 - 10294051
Alignment:
Q  139 tgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  10294102 tgtcagtatccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 10294051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 23 - 122
Target Start/End: Original strand, 13364645 - 13364744
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||||| ||||||| ||||| ||| ||||||| |||||| |||| |  |||||||| |||||||||||| | ||||||||||||| | |||||||    
T  13364645 ctatgaagcacagacactcgtcggaatagacgtgtcctggtgtcagacatgtatcgtgtccaacaccgacacatatgattacactgaattatatgatttt 13364744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 23 - 122
Target Start/End: Original strand, 32511606 - 32511705
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||||| |||||||||| |||||||||||  ||| |||| ||||   ||||| ||||||||| |||| | ||||||||||||||| |||||||||    
T  32511606 ctatgaagcacggacactcctccgattaggcgtgctccgatgtcagacatatgtcgtatccgacaccaacacttataattacactgaattatgtgatttt 32511705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 190
Target Start/End: Original strand, 12868616 - 12868784
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggaca----cgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtga 118  Q
    ||||||||||| ||||||  ||||||||||||||| || ||||||||||    |  ||||||||||||||||||||  |||||||      ||| |||||    
T  12868616 ctatgaagcaccgacacttatcggattaggcgtgttcccgtgtcggacatgtgcatgtcgtgtccgacaccgacactagtaatta-----tattgtgtga 12868710  T
Q  119 tttttacaaattctttgctgtgtc--agtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    ||||| |||||| ||  |||||||   ||||| ||||||| |||||||| || |||||||||| ||||||||||    
T  12868711 ttttttcaaattattaactgtgtcggcgtgtcagtgtcgtgtccggtgtccgagtccgtatccctgcttcatag 12868784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 190
Target Start/End: Complemental strand, 18367966 - 18367781
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtc-----------cgacaccgacacatgtaattacactgaat 111  Q
    ||||||||||| ||||||||| |||| ||||||||||| ||||| |||| | ||||||||           |||||||||||||| ||||||||||| ||    
T  18367966 ctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacatgtgtcgtgtctgacaccgacacgacaccgacacatataattacactgcat 18367867  T
Q  112 tttgtgatttttacaaattctttgctgtgtcag-------tgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    |||||||||||   |||   || |||||||| |       ||||| |||||| |||||||| ||||||||||||||||||||||||    
T  18367866 tttgtgattttctaaaaaaattagctgtgtcggcgtgtcgtgtccatgtcgtgtccggtgtccgtgtccgtatccgtgcttcatag 18367781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 43 - 124
Target Start/End: Complemental strand, 29021011 - 29020930
Alignment:
Q  43 tcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgattttta 124  Q
    |||||||||||||| | |||||||| ||||| ||||||||||||||  |||| | ||||||||||||||| || ||||||||    
T  29021011 tcggattaggcgtgcctcggtgtcgaacacgtgtcgtgtccgacacaaacacctataattacactgaattatgcgattttta 29020930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 190
Target Start/End: Original strand, 426508 - 426629
Alignment:
Q  77 cgtgtccgacaccgacacatgtaattacactgaattttgtgatttttacaaattctttgct--------gtgtcagtgtccgtgtcgtatccggtgttcg 168  Q
    |||||||||||||||||| |||||||||| | |||| |||||||||| |||||| ||  ||        ||||||||||||||||||| |||||| | ||    
T  426508 cgtgtccgacaccgacacttgtaattacatttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtccggtatccg 426607  T
Q  169 tgtccgtatccgtgcttcatag 190  Q
    |||| |||||| ||||||||||    
T  426608 tgtctgtatccatgcttcatag 426629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 190
Target Start/End: Complemental strand, 9027286 - 9027122
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||||||  |||||||| ||||||| |||||||||||||||||||||           |||||||||||| ||||||||| ||||| ||||||| |    
T  9027286 ctatgaagcacaaacactccttggattagccgtgtcccggtgtcggacacg-----------acaccgacacatataattacacggaattatgtgattat 9027198  T
Q  123 tacaaattctttgctgtgtc--------agtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
      |||||| || || |||||        |||||||||||||| ||||| || |||||||||||| |||||||||||    
T  9027197 ctcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggagtccgtgtccgtatcggtgcttcatag 9027122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 8389411 - 8389457
Alignment:
Q  26 tgaagcactgacactcctcggattaggcgtgtcccggtgtcggacac 72  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||    
T  8389411 tgaagcacggacactcctcggattaggtgtgtcccggtgtcggacac 8389457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 122
Target Start/End: Original strand, 26178615 - 26178720
Alignment:
Q  20 gatctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcg-tgtcc--gacaccgacacatgtaattacactgaattttgt 116  Q
    |||| ||||||||| |||||||||| |||||||||||||||||||||  |||| | ||| |||||   |||||||||||| | |||||||| |||| |||    
T  26178615 gatcgatgaagcacagacactcctccgattaggcgtgtcccggtgtcaaacacacatcgatgtccaacacaccgacacatatgattacactaaattatgt 26178714  T
Q  117 gatttt 122  Q
    ||||||    
T  26178715 gatttt 26178720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 72
Target Start/End: Complemental strand, 7938219 - 7938170
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacac 72  Q
    ||||||||||| |||||||||||||| ||||||||| |||||||||||||    
T  7938219 ctatgaagcacggacactcctcggatcaggcgtgtctcggtgtcggacac 7938170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 156
Target Start/End: Original strand, 403858 - 403936
Alignment:
Q  77 cgtgtccgacaccgacacatgtaattacactgaattttgtgatttttacaaattctttgctgtgtcagtgtccgtgtcgt 156  Q
    |||||||||||||||||| |||| ||||||| |||| |||||||||| ||||||  || |||||||| ||||||| ||||    
T  403858 cgtgtccgacaccgacacttgtagttacactaaattatgtgattttttcaaatt-attactgtgtcaatgtccgtatcgt 403936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 142
Target Start/End: Complemental strand, 3398729 - 3398619
Alignment:
Q  36 acactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtc-----cgacaccgacacatgtaattacactgaattttgtgatttttacaaatt 130  Q
    ||||||||| |||||| ||||| ||||||||||||| | ||||||||     ||||||||| || | ||||||||||||||| | |||||||| ||||||    
T  3398729 acactcctctgattagacgtgttccggtgtcggacatgtgtcgtgtccaacacgacaccgatacttataattacactgaattatatgattttt-caaatt 3398631  T
Q  131 ctttgctgtgtc 142  Q
     || ||||||||    
T  3398630 attagctgtgtc 3398619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 122
Target Start/End: Original strand, 7996325 - 7996417
Alignment:
Q  26 tgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||| || |||||| |||||||||||||||| ||||  |||||| ||||    |||||||||| ||| ||||||||||||||| | |||||||    
T  7996325 tgaagcacggagactccttggattaggcgtgtccccgtgttagacacgtgtcg----cgacaccgacgcatataattacactgaattatatgatttt 7996417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 122
Target Start/End: Complemental strand, 8022476 - 8022384
Alignment:
Q  26 tgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||| || |||||| |||||||||||||||| ||||  |||||| ||||    |||||||||| ||| ||||||||||||||| | |||||||    
T  8022476 tgaagcacggagactccttggattaggcgtgtccccgtgttagacacgtgtcg----cgacaccgacgcatataattacactgaattatatgatttt 8022384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 16488519 - 16488590
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    |||||||||||  ||| |||| |||| ||||||||||| ||| | |||||| ||||||||||||||||||||    
T  16488519 ctatgaagcacgaacattccttggataaggcgtgtccccgtgccagacacgtgtcgtgtccgacaccgacac 16488590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 122
Target Start/End: Complemental strand, 19040419 - 19040372
Alignment:
Q  75 gtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||||||||| ||||||| ||||||||||||||| |||||||||    
T  19040419 gtcgtgtccgacacagacacatataattacactgaattatgtgatttt 19040372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 110
Target Start/End: Complemental strand, 23771685 - 23771610
Alignment:
Q  35 gacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaa 110  Q
    ||||||| || | |||| |||||| | |||||||||||  |||||||||||||||||||  |||||||||||||||    
T  23771685 gacactcttcaggttagacgtgtctctgtgtcggacacatgtcgtgtccgacaccgacatttgtaattacactgaa 23771610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 105
Target Start/End: Complemental strand, 1316039 - 1315969
Alignment:
Q  35 gacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattaca 105  Q
    |||||| ||||| |||||||||| | ||||||||||||  | |||| ||||||||||||| ||||||||||    
T  1316039 gacacttctcgggttaggcgtgttctggtgtcggacacatgacgtgcccgacaccgacacttgtaattaca 1315969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 75
Target Start/End: Complemental strand, 7625237 - 7625183
Alignment:
Q  21 atctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcg 75  Q
    |||||||||||||  |||||||| |||||| |||||| |||||||||||||||||    
T  7625237 atctatgaagcacgaacactccttggattaagcgtgttccggtgtcggacacgcg 7625183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 45 - 95
Target Start/End: Complemental strand, 9522999 - 9522949
Alignment:
Q  45 ggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacaca 95  Q
    |||||||||||||| |||||||||||||| ||||  |||||||||||||||    
T  9522999 ggattaggcgtgtctcggtgtcggacacgtgtcggatccgacaccgacaca 9522949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 112
Target Start/End: Original strand, 16388175 - 16388246
Alignment:
Q  35 gacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaatt 112  Q
    |||| ||||||||||||||||||||| ||||||  |      |||||||||||||||||| |||||||||||||||||    
T  16388175 gacagtcctcggattaggcgtgtcccagtgtcgtgc------cgtgtccgacaccgacacttgtaattacactgaatt 16388246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 130
Target Start/End: Complemental strand, 7930407 - 7930317
Alignment:
Q  36 acactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttttacaaatt 130  Q
    |||||||||| ||||||||||||| ||||||||||||| | |     |||||||||||| || |||| |||| |||| |||||||||| ||||||    
T  7930407 acactcctcgaattaggcgtgtcctggtgtcggacacgtgac----acgacaccgacacttgaaatttcactaaattatgtgattttttcaaatt 7930317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 9629513 - 9629448
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacac 88  Q
    ||||||||||  ||||||||||||||||| |||||| | |||||||||||  || |||||||||||    
T  9629513 ctatgaagcatggacactcctcggattagacgtgtctcagtgtcggacacatgttgtgtccgacac 9629448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 94
Target Start/End: Original strand, 21223717 - 21223766
Alignment:
Q  45 ggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    |||||||||||| |||| |||||||||||||| |||| ||||||||||||    
T  21223717 ggattaggcgtgacccgttgtcggacacgcgttgtgttcgacaccgacac 21223766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 123
Target Start/End: Complemental strand, 7027301 - 7027261
Alignment:
Q  83 cgacaccgacacatgtaattacactgaattttgtgattttt 123  Q
    |||||||||||||| ||||||||||||||| ||||||||||    
T  7027301 cgacaccgacacatataattacactgaattatgtgattttt 7027261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 130
Target Start/End: Original strand, 7801155 - 7801203
Alignment:
Q  82 ccgacaccgacacatgtaattacactgaattttgtgatttttacaaatt 130  Q
    ||||||||||||| ||||||||| ||||||| |||||||||| ||||||    
T  7801155 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaatt 7801203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 123
Target Start/End: Complemental strand, 13789273 - 13789173
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||||||  |||||||| | || |||||| ||||  |||| |||||| ||| |||||||||  || |||| ||||||||||| ||||| |||||||    
T  13789273 ctatgaagcacgaacactccttgaataaggcgtatccccatgtcagacacgtgtcatgtccgacattgatacatataattacactgcattttatgatttt 13789174  T
Q  123 t 123  Q
    |    
T  13789173 t 13789173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 123
Target Start/End: Complemental strand, 13797892 - 13797792
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||||||  |||||||| | || |||||| ||||  |||| |||||| ||| |||||||||  || |||| ||||||||||| ||||| |||||||    
T  13797892 ctatgaagcacgaacactccttgaataaggcgtatccccatgtcagacacgtgtcatgtccgacattgatacatataattacactgcattttatgatttt 13797793  T
Q  123 t 123  Q
    |    
T  13797792 t 13797792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 112
Target Start/End: Complemental strand, 30851674 - 30851630
Alignment:
Q  68 gacacgcgtcgtgtccgacaccgacacatgtaattacactgaatt 112  Q
    |||||| |||||||||||||||||||||| |||||||| ||||||    
T  30851674 gacacgtgtcgtgtccgacaccgacacatataattacattgaatt 30851630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 122
Target Start/End: Original strand, 31579219 - 31579264
Alignment:
Q  75 gtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||||||||||||||||  ||||||||||||||| |||||||||    
T  31579219 gtcgtgtccgacaccgacaca--taattacactgaattatgtgatttt 31579264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 32839571 - 32839611
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggt 63  Q
    ||||||||||| |||||| ||||||||||||||||||||||    
T  32839571 ctatgaagcacagacacttctcggattaggcgtgtcccggt 32839611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 190
Target Start/End: Complemental strand, 33818015 - 33817901
Alignment:
Q  79 tgtccgacaccgacac---atgtaattacactgaattttgtgatttttacaaattctttgctgtgtcagtgtccgtgtcgtatccggtgttcgtgtccgt 175  Q
    ||||||||||||||||   || ||||||||||||||| ||  |||||  | |||| || || |||||||||| |||| ||| |||||||| | || | ||    
T  33818015 tgtccgacaccgacacgatatataattacactgaattatgaaattttctccaattattagcggtgtcagtgttcgtgccgtgtccggtgtccatgactgt 33817916  T
Q  176 atccgtgcttcatag 190  Q
    |||||||||||||||    
T  33817915 atccgtgcttcatag 33817901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 102
Target Start/End: Complemental strand, 34172288 - 34172233
Alignment:
Q  42 ctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaatt 102  Q
    |||||||||||||||||| |||||||||||     |||||||||||||||||||| |||||    
T  34172288 ctcggattaggcgtgtcctggtgtcggaca-----cgtgtccgacaccgacacatataatt 34172233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 34446690 - 34446618
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtc-gtgtccgacaccgacac 94  Q
    ||||||||||| ||||||||| |||||||| ||||||| ||||| || ||||||| ||||  |||||||||||    
T  34446690 ctatgaagcacggacactccttggattaggtgtgtcccagtgtcagatacgcgtcggtgttggacaccgacac 34446618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 10294237 - 10294166
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    ||||||||||| |||||||||| ||||||  ||||||  || ||||||||  ||||||||||||||| ||||    
T  10294237 ctatgaagcacagacactcctcagattagctgtgtcctagtttcggacacatgtcgtgtccgacaccaacac 10294166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 122
Target Start/End: Original strand, 16488590 - 16488629
Alignment:
Q  83 cgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||||||||| ||||||||||| |||||||||||||    
T  16488590 cgacaccgacacatataattacactgcattttgtgatttt 16488629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 24807162 - 24807115
Alignment:
Q  24 tatgaagcactgacactcctcggattaggcgtgtcccggtgtcggaca 71  Q
    ||||||||||||||||||||||||||||| ||| ||| | ||||||||    
T  24807162 tatgaagcactgacactcctcggattaggtgtgccccagcgtcggaca 24807115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 123
Target Start/End: Original strand, 26402673 - 26402720
Alignment:
Q  76 tcgtgtccgacaccgacacatgtaattacactgaattttgtgattttt 123  Q
    ||||||||||||||||||| ||| ||||||||||||| ||| ||||||    
T  26402673 tcgtgtccgacaccgacacttgtgattacactgaattatgtcattttt 26402720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 57
Target Start/End: Original strand, 7723199 - 7723233
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgt 57  Q
    ||||||||||| |||||||||||||||||||||||    
T  7723199 ctatgaagcacggacactcctcggattaggcgtgt 7723233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 121
Target Start/End: Original strand, 9911528 - 9911566
Alignment:
Q  83 cgacaccgacacatgtaattacactgaattttgtgattt 121  Q
    |||||||||||| ||||||||||||||||| ||||||||    
T  9911528 cgacaccgacacttgtaattacactgaattatgtgattt 9911566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 10842654 - 10842612
Alignment:
Q  21 atctatgaagcactgacactcctcggattaggcgtgtcccggt 63  Q
    ||||||||||||| ||||||||||||||||| |||||| ||||    
T  10842654 atctatgaagcacggacactcctcggattagccgtgtctcggt 10842612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 17435329 - 17435259
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgaca 93  Q
    |||||||| || ||||||  || |||||| |||||||| |||||| ||||| ||||||||||||| |||||    
T  17435329 ctatgaagtacggacacttttcagattagacgtgtcccagtgtcgaacacgtgtcgtgtccgacatcgaca 17435259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 112
Target Start/End: Original strand, 21924930 - 21924964
Alignment:
Q  78 gtgtccgacaccgacacatgtaattacactgaatt 112  Q
    ||||||||||||||||||| |||||||||||||||    
T  21924930 gtgtccgacaccgacacatataattacactgaatt 21924964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #81
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 123
Target Start/End: Complemental strand, 1700416 - 1700371
Alignment:
Q  78 gtgtccgacaccgacacatgtaattacactgaattttgtgattttt 123  Q
    ||||||||||||||||| | ||||||||||||| | ||||||||||    
T  1700416 gtgtccgacaccgacacttataattacactgaaatatgtgattttt 1700371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #82
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 122
Target Start/End: Original strand, 5732504 - 5732549
Alignment:
Q  77 cgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||||||||||||||| |||||||||| || | |||||||||    
T  5732504 cgtgtccgacaccgacacatataattacactaaaatatgtgatttt 5732549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #83
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 8805524 - 8805561
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtccc 60  Q
    ||||||||||| ||||||||||||||||||| ||||||    
T  8805524 ctatgaagcacggacactcctcggattaggcatgtccc 8805561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #84
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 122
Target Start/End: Original strand, 12235462 - 12235558
Alignment:
Q  26 tgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtc-gtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||| ||||||  | |||||||| ||||||||||| ||||||| |||| ||||| |||| |||||| | | ||||||||||||| ||| |||||    
T  12235462 tgaagcacggacactttttggattaggggtgtcccggtgccggacacacgtcggtgtcggaca-cgacacctatgattacactgaattatgtcatttt 12235558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #85
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 72
Target Start/End: Original strand, 21924907 - 21924940
Alignment:
Q  39 ctcctcggattaggcgtgtcccggtgtcggacac 72  Q
    |||||||||||||||||||||||||||| |||||    
T  21924907 ctcctcggattaggcgtgtcccggtgtccgacac 21924940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #86
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 68
Target Start/End: Original strand, 34073278 - 34073323
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcgg 68  Q
    ||||||||||| ||||||||||| |||||  |||||||||||||||    
T  34073278 ctatgaagcacggacactcctcgaattagaggtgtcccggtgtcgg 34073323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 426478 - 426514
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcc 59  Q
    ||||||||||| |||||||||| ||||||||||||||    
T  426478 ctatgaagcacggacactcctcagattaggcgtgtcc 426514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #88
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 5732474 - 5732510
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcc 59  Q
    ||||||||||  |||||||||||||||||||||||||    
T  5732474 ctatgaagcatggacactcctcggattaggcgtgtcc 5732510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #89
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 122
Target Start/End: Complemental strand, 9629443 - 9629403
Alignment:
Q  82 ccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||||||||| |||||||| |||||| |||||||||    
T  9629443 ccgacaccgacacatataattacattgaattatgtgatttt 9629403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #90
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 10649407 - 10649371
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcc 59  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  10649407 ctatgaagcacggacactccttggattaggcgtgtcc 10649371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #91
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 25207846 - 25207810
Alignment:
Q  36 acactcctcggattaggcgtgtcccggtgtcggacac 72  Q
    |||||||||  ||||||||||||||||||||||||||    
T  25207846 acactcctcatattaggcgtgtcccggtgtcggacac 25207810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #92
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 31673555 - 31673595
Alignment:
Q  144 gtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgct 184  Q
    ||||||||| ||| |||||||| ||||||||||||||||||    
T  31673555 gtgtccgtgccgtgtccggtgtccgtgtccgtatccgtgct 31673595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #93
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 87
Target Start/End: Complemental strand, 33818087 - 33818023
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgaca 87  Q
    ||||||| ||| |||||||||| |||||||| |||| | ||||  |||||||| |||||||||||    
T  33818087 ctatgaatcacagacactcctcagattaggcatgtctcagtgttagacacgcgacgtgtccgaca 33818023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #94
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 34894968 - 34895016
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggaca 71  Q
    ||||||||||| ||||||||||  |||||| ||||||| ||||||||||    
T  34894968 ctatgaagcacggacactcctcatattaggtgtgtccctgtgtcggaca 34895016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 93; Significance: 2e-45; HSPs: 88)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 25 - 190
Target Start/End: Original strand, 2438661 - 2438831
Alignment:
Q  25 atgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgattttta 124  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||| ||||||||||     
T  2438661 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgatttttt 2438760  T
Q  125 caaattctttgctgt------gtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
     ||||| || |||||      ||||||||||||||  | ||||||| |||||||||||||||||||||||||    
T  2438761 gaaattattagctgtgtcagcgtcagtgtccgtgttttgtccggtg-tcgtgtccgtatccgtgcttcatag 2438831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 22 - 142
Target Start/End: Complemental strand, 37559097 - 37558977
Alignment:
Q  22 tctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgattt 121  Q
    |||||||||||| |||||||||||||||| |||||| ||||||||||||||| |||  ||||||||||||||| |||||||||| |||||| ||||||||    
T  37559097 tctatgaagcacggacactcctcggattaagcgtgtaccggtgtcggacacgtgtcaagtccgacaccgacacttgtaattacattgaattatgtgattt 37558998  T
Q  122 ttacaaattctttgctgtgtc 142  Q
    ||||||||| || ||||||||    
T  37558997 ttacaaattattagctgtgtc 37558977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 23 - 175
Target Start/End: Original strand, 38117099 - 38117253
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||| || |||||||||||| |||| ||||||||||| ||| | |||||||||    
T  38117099 ctatgaagcacggacacccctcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccaacacttgtaattacaccgaagtatgtgatttt 38117198  T
Q  123 tacaaattctttgctgtgtc--agtgtccgtgtcgtatccggtgttcgtgtccgt 175  Q
    | |||||| || ||||||||   ||||| ||||||| |||||||| ||| |||||    
T  38117199 ttcaaattattagctgtgtcggcgtgtcagtgtcgtgtccggtgtccgtatccgt 38117253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 23 - 144
Target Start/End: Original strand, 18840953 - 18841074
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||| | |||||||| ||||||||||| |||||||||||| |||| ||| |||||    
T  18840953 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacacttgtaattacacttaattatgtaatttt 18841052  T
Q  123 tacaaattctttgctgtgtcag 144  Q
    | |||||| || | ||||||||    
T  18841053 ttcaaattattagttgtgtcag 18841074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 15972992 - 15972885
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||||| |||| || |||||||||| ||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||| ||| |||||    
T  15972992 ctatgaagcacggacattcttcggattaggtgtgtcccggcgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactgaattgtgtaatttt 15972893  T
Q  123 tacaaatt 130  Q
    | ||||||    
T  15972892 ttcaaatt 15972885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 23 - 136
Target Start/End: Complemental strand, 37419873 - 37419749
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccga-----------cacatgtaattacactgaat 111  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||           ||| ||||||||||||||||    
T  37419873 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgcatcgtgtccgacaccgacacgacaccggcacttgtaattacactgaat 37419774  T
Q  112 tttgtgatttttacaaattctttgc 136  Q
    |||||||||||| |||||| |||||    
T  37419773 tttgtgattttttcaaattatttgc 37419749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 24 - 189
Target Start/End: Complemental strand, 44860449 - 44860273
Alignment:
Q  24 tatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtcc-----------gacaccgacacatgtaattacactgaatt 112  Q
    |||||||||| ||||||||||| |||||| |||||||| ||||||||||  |||||||||           ||||||||||||| |||||||||||||||    
T  44860449 tatgaagcacggacactcctcgaattaggtgtgtcccgatgtcggacacatgtcgtgtccaacaccaacacgacaccgacacatataattacactgaatt 44860350  T
Q  113 ttgtgatttttacaaattctttgctgtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcata 189  Q
     || ||||||  |||||| || || ||||||||||||||||||| || ||||| ||| |||||||||||||||||||    
T  44860349 atgcgattttctcaaattattagcggtgtcagtgtccgtgtcgtgtctggtgtacgtatccgtatccgtgcttcata 44860273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 21 - 190
Target Start/End: Complemental strand, 26769643 - 26769461
Alignment:
Q  21 atctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtcc-----------gacaccgacacatgtaattacactga 109  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||           ||||||||||| |||||||||||       
T  26769643 atctatgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacatgacaccgacacttgtaattacaccag 26769544  T
Q  110 attttgtgatttttacaaattctttgctgtgtc--agtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    ||  |||||| ||| |||||| || | ||||||   ||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  26769543 ataatgtgatattttcaaattattagttgtgtcggcgtgtctgtgtcgtgtccggtgtccgtgtccgtatccgtgcttcatag 26769461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 122
Target Start/End: Original strand, 20242667 - 20242766
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||||| ||||||| |||||| ||||||||||  ||||| |||||| || ||||||||||||||||||| ||||||||||||||| |||||||||    
T  20242667 ctatgaagcacagacactcttcggataaggcgtgtcctcgtgtcagacacgtgttgtgtccgacaccgacacatataattacactgaattatgtgatttt 20242766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 119
Target Start/End: Complemental strand, 28596587 - 28596492
Alignment:
Q  24 tatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgat 119  Q
    |||||||||| |||||||||||||||||| ||||||  |||||||||||| |||||||||||||||||||| | |||||||||||| || ||||||    
T  28596587 tatgaagcacggacactcctcggattaggagtgtccgagtgtcggacacgtgtcgtgtccgacaccgacacttataattacactgacttatgtgat 28596492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 27 - 122
Target Start/End: Original strand, 37411188 - 37411283
Alignment:
Q  27 gaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||| | ||||||||||| |||||||||||| |||||||||||||||||||| ||||| |||||||| |||| |||||||||| |||||||||    
T  37411188 gaagcacaggcactcctcggactaggcgtgtcccagtgtcggacacgcgtcgtgttcgacatcgacacatataatcacactgaattatgtgatttt 37411283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 35 - 123
Target Start/End: Complemental strand, 5040841 - 5040753
Alignment:
Q  35 gacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgattttt 123  Q
    ||||||||| ||| |||||||||||||| |||||||||  |||||||||||||||||||| |||||||||| |||||| ||||||||||    
T  5040841 gacactccttggactaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccgacacttgtaattacattgaattatgtgattttt 5040753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 22 - 122
Target Start/End: Complemental strand, 24009415 - 24009316
Alignment:
Q  22 tctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgattt 121  Q
    |||||||||||| ||||||||| |||| ||||||||||| ||||| |||||| ||||||||||||||||||||||  | |||||||| ||||||||||||    
T  24009415 tctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacat-aatttacactgcattttgtgattt 24009317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 30404790 - 30404897
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||||||  || || ||| |||||||| ||||| ||||||||||| | |||||||||||| ||||||| ||||||||||||||||| |||||||||    
T  30404790 ctatgaagcacaaacgcttctcagattaggcatgtcctggtgtcggacatgtgtcgtgtccgacgccgacacttgtaattacactgaattatgtgatttt 30404889  T
Q  123 tacaaatt 130  Q
    | ||||||    
T  30404890 ttcaaatt 30404897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 45 - 121
Target Start/End: Complemental strand, 5367289 - 5367213
Alignment:
Q  45 ggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgattt 121  Q
    |||||||||||||||||| |||||| | | |||||||||||||||||||||| ||||||||||||||| ||||||||    
T  5367289 ggattaggcgtgtcccggagtcggatatgtgtcgtgtccgacaccgacacatataattacactgaattatgtgattt 5367213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 36 - 123
Target Start/End: Complemental strand, 12224329 - 12224242
Alignment:
Q  36 acactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgattttt 123  Q
    |||||||| |||||||||||||||| ||||||||||||  ||||||||||||||||||| |||||||||| || ||| || |||||||    
T  12224329 acactccttggattaggcgtgtcccagtgtcggacacgtatcgtgtccgacaccgacacttgtaattacattggattatgggattttt 12224242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 35056998 - 35056927
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    ||||||||||| |||||||||| ||||||||||||  | |||||||||||| ||||||||||||||||||||    
T  35056998 ctatgaagcacggacactcctcagattaggcgtgtttccgtgtcggacacgtgtcgtgtccgacaccgacac 35056927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 27084388 - 27084318
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgaca 93  Q
    ||||||||||  |||||||||| ||||||||||||| |||||| ||||||| |||||||||||||||||||    
T  27084388 ctatgaagcagagacactcctccgattaggcgtgtctcggtgttggacacgtgtcgtgtccgacaccgaca 27084318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 34993922 - 34994011
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaatt 112  Q
    |||||||||||  |||||||| | |||||||||||||| |||||||||||  ||||||| |||||| ||||||| |||||||| ||||||    
T  34993922 ctatgaagcacgaacactccttgaattaggcgtgtcccagtgtcggacacatgtcgtgttcgacactgacacatataattacattgaatt 34994011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 42511322 - 42511387
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacac 88  Q
    ||||||||||| ||||||||||||||||| |||||||| |||||||||||| || |||||||||||    
T  42511322 ctatgaagcacggacactcctcggattagccgtgtccctgtgtcggacacgtgttgtgtccgacac 42511387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 19942382 - 19942314
Alignment:
Q  25 atgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgaca 93  Q
    ||||||||  |||||||||||||||||||||||||||||||| |||||  | |||||||||||||||||    
T  19942382 atgaagcatggacactcctcggattaggcgtgtcccggtgtcagacacatgccgtgtccgacaccgaca 19942314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 22 - 144
Target Start/End: Original strand, 11223792 - 11223924
Alignment:
Q  22 tctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgaca-----------ccgacacatgtaattacactgaa 110  Q
    |||||||||||| |||||||||| ||||||||||||||||||||| |||| | |||||||||||||           ||||||| |||||||||||||||    
T  11223792 tctatgaagcacggacactcctcagattaggcgtgtcccggtgtcagaca-gtgtcgtgtccgacacctacatgacaccgacacttgtaattacactgaa 11223890  T
Q  111 ttttgtgatttttacaaattctttgctgtgtcag 144  Q
    || ||| |||||| |||| | || ||||||||||    
T  11223891 ttatgttattttttcaaaatattagctgtgtcag 11223924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 30717459 - 30717530
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    ||||||||||| ||||||||| ||||||||||| |||| |||||| ||||| ||||||||||||| ||||||    
T  30717459 ctatgaagcacggacactccttggattaggcgtatcccagtgtcgaacacgtgtcgtgtccgacaacgacac 30717530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 23 - 121
Target Start/End: Complemental strand, 41843565 - 41843462
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccg-----acaccgacacatgtaattacactgaattttgtg 117  Q
    ||||||||||| |||||||||||||| | ||||||||| |||||||||||| |||| |||||     |||||||||||| |||||| || ||||| ||||    
T  41843565 ctatgaagcacagacactcctcggataaagcgtgtccccgtgtcggacacgtgtcgcgtccgacacaacaccgacacatataattataccgaattatgtg 41843466  T
Q  118 attt 121  Q
    ||||    
T  41843465 attt 41843462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 130
Target Start/End: Complemental strand, 15657992 - 15657876
Alignment:
Q  25 atgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtc-----------cgacaccgacacatgtaattacactgaattt 113  Q
    ||||||||  ||||||||||||| |||||||||||||| |||||||||| |||| |||           |||||||||||  |||||||||||||||||     
T  15657992 atgaagcatggacactcctcggactaggcgtgtcccggcgtcggacacgtgtcgcgtccgacatcaacacgacaccgacatttgtaattacactgaatta 15657893  T
Q  114 tgtgatttttacaaatt 130  Q
    |||||||||||||||||    
T  15657892 tgtgatttttacaaatt 15657876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 92
Target Start/End: Complemental strand, 17776714 - 17776648
Alignment:
Q  26 tgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgac 92  Q
    |||||||| ||||||||||||||||||| |||||||  ||||||||| |||||||||| ||||||||    
T  17776714 tgaagcacggacactcctcggattaggcctgtcccgaggtcggacacacgtcgtgtccaacaccgac 17776648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 112
Target Start/End: Complemental strand, 21624374 - 21624297
Alignment:
Q  30 gcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaatt 112  Q
    |||| ||||||||| |||||||| |||||||| |||||||||||     |||||||||||||||| |||||||||||||||||    
T  21624374 gcacggacactccttggattaggtgtgtcccgctgtcggacacg-----tgtccgacaccgacacttgtaattacactgaatt 21624297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 34784909 - 34784982
Alignment:
Q  21 atctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    ||||||||||||| ||||||||||| || ||||||||||| ||||| |||| | ||||||||||| ||||||||    
T  34784909 atctatgaagcacagacactcctcgaataaggcgtgtccccgtgtcagacaggtgtcgtgtccgataccgacac 34784982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 190
Target Start/End: Original strand, 21374706 - 21374809
Alignment:
Q  90 gacacatgtaattacactgaattttgtgatttttacaaattctttgctgtgtc--agtgtccgtgt-cgtatccggtgttcgtgtccgtatccgtgcttc 186  Q
    ||||| ||||||||||||||||| ||| |||||| |||||| || ||||||||   ||||  |||| ||| |||||||| ||||||||||||||||||||    
T  21374706 gacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtccggtgtccgtgtccgtatccgtgcttc 21374805  T
Q  187 atag 190  Q
    ||||    
T  21374806 atag 21374809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 190
Target Start/End: Original strand, 18631351 - 18631514
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||| | ||||||||||| |||||||||||||| ||||| |||||    ||  | ||| || || |||| |||||||| |||||  |||||||||    
T  18631351 ctatgaagctcggacactcctcgcattaggcgtgtcccagtgtctgacac----cga-tacgatactgatacatataattacattgaatgatgtgatttt 18631445  T
Q  123 ta-caaattctttgctgtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    |  |||||| || |  |||| |||||||||||||| |||||||| ||||| |||||| |||||||||||    
T  18631446 tttcaaattattagaggtgttagtgtccgtgtcgtgtccggtgtccgtgttcgtatctgtgcttcatag 18631514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 97 - 191
Target Start/End: Original strand, 1886892 - 1886986
Alignment:
Q  97 gtaattacactgaattttgtgatttttacaaattctttgctgtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatagc 191  Q
    ||||||||| |||||| ||| | |||| |||||| ||  ||||||  |||||| |||||||||| |||| |||||| ||||||||||||||||||    
T  1886892 gtaattacattgaattatgtaaatttttcaaattattaactgtgttggtgtccatgtcgtatccagtgtccgtgtctgtatccgtgcttcatagc 1886986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 14996170 - 14996263
Alignment:
Q  34 tgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtcc-----gacaccgacacatgtaattacactgaattttgtgattttt 123  Q
    |||||||||||||||||||||||| |||||||| |||||| || ||||||     ||||||||||| |||||||||||| |||| | ||||||||    
T  14996170 tgacactcctcggattaggcgtgttccggtgtcagacacgtgt-gtgtccgacaagacaccgacacttgtaattacactaaattatatgattttt 14996263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 77 - 123
Target Start/End: Original strand, 19536391 - 19536437
Alignment:
Q  77 cgtgtccgacaccgacacatgtaattacactgaattttgtgattttt 123  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||    
T  19536391 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttt 19536437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 1328064 - 1327970
Alignment:
Q  54 gtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttttacaaattctttgctgtgtcagtgtccg 150  Q
    |||||||||||||||||| ||||| |||  ||||||||||||  |||||| |||||||||| |||||||  |||||| || || ||||| |||||||    
T  1328064 gtgtcccggtgtcggacaagcgtcatgtttgacaccgacaca--taattatactgaattttatgattttctcaaattattagcggtgtcggtgtccg 1327970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 22084755 - 22084830
Alignment:
Q  22 tctatgaagcactgacactcctcggattaggcgtgtccc---ggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    |||||||||||| ||||||| ||||||||||||||||||   |||||| |||||| || ||||||||||| |||||    
T  22084755 tctatgaagcacagacactcatcggattaggcgtgtcccggtggtgtcagacacgtgttgtgtccgacactgacac 22084830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 122
Target Start/End: Complemental strand, 31808174 - 31808097
Alignment:
Q  45 ggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||| |||||| ||||||| ||| | ||||||| | |||| ||||||| ||||||||||||||| |||||||||    
T  31808174 ggattaggtgtgtccaggtgtcgaacatgtgtcgtgttcaacactgacacatataattacactgaattatgtgatttt 31808097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 110
Target Start/End: Complemental strand, 21091839 - 21091755
Alignment:
Q  26 tgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaa 110  Q
    |||||||| ||||||| ||||| |||| ||||||||||||| |||| | | | |||| ||||| ||||| |||||||||||||||    
T  21091839 tgaagcacggacactcttcggaataggtgtgtcccggtgtccgacaggtggcttgtctgacactgacacttgtaattacactgaa 21091755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 21782744 - 21782816
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacaca 95  Q
    ||||||||||| |||||||| | |||||| ||||||||||||| ||||||| |||||| | |||||| |||||    
T  21782744 ctatgaagcacggacactccacagattagacgtgtcccggtgttggacacgtgtcgtgcctgacaccaacaca 21782816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 28412478 - 28412426
Alignment:
Q  21 atctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacg 73  Q
    ||||||||||||||||| ||||||| ||||| |||||||| ||||||||||||    
T  28412478 atctatgaagcactgacgctcctcgaattagccgtgtcccagtgtcggacacg 28412426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 28678033 - 28677921
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac-----atgtaattacactgaattttgtg 117  Q
    ||||||||||  |||||||||| | | || |||||||| |||||||||||  |||||||  |||||||||||     || ||||||||||||||| ||||    
T  28678033 ctatgaagcatagacactcctccggtcagccgtgtccctgtgtcggacacttgtcgtgtttgacaccgacaccgaacatataattacactgaattatgtg 28677934  T
Q  118 atttttacaaatt 130  Q
    |||||| ||||||    
T  28677933 attttttcaaatt 28677921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 123
Target Start/End: Original strand, 23058389 - 23058482
Alignment:
Q  28 aagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgattttt 123  Q
    |||||| |||||| ||||||||||||||||||||||||||||||  |  ||   | ||||||||||| ||||||||||||| ||| ||||||||||    
T  23058389 aagcacggacacttctcggattaggcgtgtcccggtgtcggacaa-caccgacac-gacaccgacacttgtaattacactggattatgtgattttt 23058482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 112
Target Start/End: Complemental strand, 27460141 - 27460067
Alignment:
Q  35 gacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaatt 112  Q
    ||||||||| ||||||| ||||||||||||| ||| ||| ||   ||||||||||||| | |||||||||||||||||    
T  27460141 gacactccttggattagacgtgtcccggtgttggatacgtgt---gtccgacaccgacccttgtaattacactgaatt 27460067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 36096304 - 36096375
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    ||||||||||| ||||||| | || | ||||||||||| ||||| |||||| ||||||||||||| ||||||    
T  36096304 ctatgaagcacggacactctttggttaaggcgtgtccccgtgtcagacacgtgtcgtgtccgacatcgacac 36096375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 10535684 - 10535734
Alignment:
Q  22 tctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacac 72  Q
    ||||||||||||  |||||||||||||||||||||||| |||||| |||||    
T  10535684 tctatgaagcacgaacactcctcggattaggcgtgtcctggtgtcagacac 10535734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 11307934 - 11308004
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtc-gtgtccgacaccgacac 94  Q
    ||||||||||| ||||||||||||||||   ||||  |||||||||||||||||| |||||| ||||||||||    
T  11307934 ctatgaagcacggacactcctcggatta--agtgtttcggtgtcggacacgcgtcggtgtccaacaccgacac 11308004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 192
Target Start/End: Original strand, 24975325 - 24975433
Alignment:
Q  83 cgacaccgacacatgtaattacactgaattttgtgatttttacaaattctttgctgtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtg 182  Q
    |||||||||| ||| || |||||||||||| |  ||||||  |||||| || || ||||| ||||| ||||||| |||||||| |||| | ||||| |||    
T  24975325 cgacaccgacgcatatatttacactgaattatacgattttctcaaattattagcggtgtc-gtgtcagtgtcgtgtccggtgtccgtgcctgtatctgtg 24975423  T
Q  183 cttcatagct 192  Q
    ||||||||||    
T  24975424 cttcatagct 24975433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 122
Target Start/End: Original strand, 34691799 - 34691844
Alignment:
Q  77 cgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||||||||||||||| ||||||||||||||| | |||||||    
T  34691799 cgtgtccgacaccgacacatataattacactgaattatatgatttt 34691844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 122
Target Start/End: Original strand, 34714211 - 34714256
Alignment:
Q  77 cgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||||||||||||||| ||||||||||||||| | |||||||    
T  34714211 cgtgtccgacaccgacacatataattacactgaattatatgatttt 34714256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 34785044 - 34785097
Alignment:
Q  137 tgtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    |||||||||||||||||||| || || || |||||||||||| |||||||||||    
T  34785044 tgtgtcagtgtccgtgtcgtgtctggggtccgtgtccgtatctgtgcttcatag 34785097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 142
Target Start/End: Complemental strand, 6940351 - 6940255
Alignment:
Q  46 gattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttttacaaattctttgctgtgtc 142  Q
    ||||||| |||||  ||||| ||||||| |||||||| || |||||||| |||||||||||| |||| ||| | ||||  ||||| || ||||||||    
T  6940351 gattaggtgtgtcttggtgttggacacgtgtcgtgtcggataccgacacttgtaattacacttaattatgtaactttttaaaattattagctgtgtc 6940255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 18622721 - 18622673
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggaca 71  Q
    ||||||||||| |||||||||||||||| | |||||||||||| |||||    
T  18622721 ctatgaagcacggacactcctcggattaagtgtgtcccggtgtaggaca 18622673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 178
Target Start/End: Original strand, 36756407 - 36756447
Alignment:
Q  138 gtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatc 178  Q
    ||||||||||| |||||||||||| ||||||||||||||||    
T  36756407 gtgtcagtgtctgtgtcgtatccgatgttcgtgtccgtatc 36756447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 44635612 - 44635568
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcg 67  Q
    ||||||||||| |||||||||| ||||||||||||| ||||||||    
T  44635612 ctatgaagcacggacactcctcagattaggcgtgtctcggtgtcg 44635568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 82
Target Start/End: Original strand, 15907851 - 15907910
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtc 82  Q
    ||||||||||| ||||||| || |||| ||||||||||||||||||| | | ||||||||    
T  15907851 ctatgaagcacggacactcatcagattgggcgtgtcccggtgtcggatatgtgtcgtgtc 15907910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 142
Target Start/End: Original strand, 20539674 - 20539733
Alignment:
Q  83 cgacaccgacacatgtaattacactgaattttgtgatttttacaaattctttgctgtgtc 142  Q
    |||||||||||| |||||||||||| |||| | |||||||| |||||| || ||||||||    
T  20539674 cgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtc 20539733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 23354582 - 23354652
Alignment:
Q  24 tatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtc-gtgtccgacaccgacac 94  Q
    |||||| ||| |||||||||||||||||||||||||| ||||| |||||  ||| ||||||||| |||||||    
T  23354582 tatgaaccacggacactcctcggattaggcgtgtccc-gtgtcagacaccggtcggtgtccgaccccgacac 23354652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 29367281 - 29367332
Alignment:
Q  21 atctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacac 72  Q
    |||||||||||||  ||| |||||||||||||| |||| |||||||||||||    
T  29367281 atctatgaagcacaaacattcctcggattaggcatgtctcggtgtcggacac 29367332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 36756275 - 36756338
Alignment:
Q  25 atgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacac 88  Q
    ||||||||| ||||||||| |||||||||||||  |||||||||||| | || |||| ||||||    
T  36756275 atgaagcacagacactcctaggattaggcgtgttgcggtgtcggacatgtgttgtgttcgacac 36756338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 42832234 - 42832281
Alignment:
Q  25 atgaagcactgacactcctcggattaggcgtgtcccggtgtcggacac 72  Q
    ||||||||  ||||||||| |||||||||||||||||| |||||||||    
T  42832234 atgaagcaaggacactccttggattaggcgtgtcccggagtcggacac 42832281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 112
Target Start/End: Complemental strand, 2415421 - 2415347
Alignment:
Q  38 actcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaatt 112  Q
    |||||||||||||  |||||| |||||||||||| | ||||||||  ||||| |||||| || ||||||| ||||    
T  2415421 actcctcggattactcgtgtctcggtgtcggacatgagtcgtgtctcacaccaacacatatagttacacttaatt 2415347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 3444827 - 3444869
Alignment:
Q  24 tatgaagcactgacactcctcggattaggcgtgtcccggtgtc 66  Q
    |||||||||| ||||||||||||||||||| |||||| |||||    
T  3444827 tatgaagcacggacactcctcggattaggcatgtcccagtgtc 3444869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 94
Target Start/End: Complemental strand, 4207973 - 4207915
Alignment:
Q  36 acactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    |||||| ||||||||  |||||  |||||||| ||||| ||||||||||||||||||||    
T  4207973 acactcttcggattaaacgtgtttcggtgtcgaacacgtgtcgtgtccgacaccgacac 4207915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 130
Target Start/End: Complemental strand, 5473394 - 5473340
Alignment:
Q  76 tcgtgtccgacaccgacacatgtaattacactgaattttgtgatttttacaaatt 130  Q
    |||||||||||||||||||||   ||||||| ||||| |||||||||| ||||||    
T  5473394 tcgtgtccgacaccgacacataatattacaccgaattatgtgattttttcaaatt 5473340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 147
Target Start/End: Original strand, 18255974 - 18256044
Alignment:
Q  77 cgtgtccgacaccgacacatgtaattacactgaattttgtgatttttacaaattctttgctgtgtcagtgt 147  Q
    |||||||||||||||||| | |||||||| | |||| ||||||||||  ||||| ||  ||||||||||||    
T  18255974 cgtgtccgacaccgacacttctaattacattaaattatgtgatttttttaaattattatctgtgtcagtgt 18256044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 23354926 - 23354995
Alignment:
Q  25 atgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtc-gtgtccgacaccgacac 94  Q
    ||||||||  |||||||||||||||||||||||||| ||||| |||||| ||| |||||| || |||||||    
T  23354926 atgaagcaaggacactcctcggattaggcgtgtccc-gtgtcagacacgggtcggtgtccaaccccgacac 23354995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 29176446 - 29176528
Alignment:
Q  36 acactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtga 118  Q
    ||||| || |||||||| ||||| | |||||||||| | | ||||||| ||||| |||| | ||||||||||||||| |||||    
T  29176446 acacttcttggattaggtgtgtctcagtgtcggacatgtgccgtgtccaacaccaacacttataattacactgaattatgtga 29176528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 31018691 - 31018661
Alignment:
Q  21 atctatgaagcactgacactcctcggattag 51  Q
    |||||||||||||||||||||||||||||||    
T  31018691 atctatgaagcactgacactcctcggattag 31018661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 34006930 - 34007020
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgt-cgtgtccgacaccgacacatgtaattacactgaatt 112  Q
    ||||||||||| ||||||||| | |||||| |||| |||||||| ||||||  |  |||||| |||||||||| | | |||||||||||||    
T  34006930 ctatgaagcacggacactccttgaattaggtgtgttccggtgtcagacacgaataggtgtcccacaccgacacctatgattacactgaatt 34007020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 34221463 - 34221501
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccg 61  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  34221463 ctatgaagcacggaaactcctcggattaggcgtgtcccg 34221501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 188
Target Start/End: Original strand, 34337239 - 34337289
Alignment:
Q  138 gtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcat 188  Q
    |||||| |||||||||||||| |||| | |||||||||||||||| |||||    
T  34337239 gtgtcaatgtccgtgtcgtatacggtatccgtgtccgtatccgtgattcat 34337289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 41849420 - 41849354
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtc-gtgtccgacac 88  Q
    ||||||||||| |||||  || | |||||||||||| ||||||| |||||||||| |||||||||||    
T  41849420 ctatgaagcacggacacctctagaattaggcgtgtcgcggtgtcagacacgcgtcggtgtccgacac 41849354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 72
Target Start/End: Complemental strand, 12748786 - 12748737
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacac 72  Q
    ||||||||||| ||||||||||  ||||||| |||||||||||| |||||    
T  12748786 ctatgaagcacagacactcctcaaattaggcatgtcccggtgtccgacac 12748737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 72
Target Start/End: Original strand, 15909570 - 15909619
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacac 72  Q
    |||||||||||  |||||| ||| |||||||||||||| |||||||||||    
T  15909570 ctatgaagcacgaacactcttcgaattaggcgtgtccctgtgtcggacac 15909619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 88
Target Start/End: Complemental strand, 17651681 - 17651616
Alignment:
Q  24 tatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtc-gtgtccgacac 88  Q
    |||||||||| |||||   | |||||||||||||| ||||||| |||||||||| |||||||||||    
T  17651681 tatgaagcacggacacctttaggattaggcgtgtcgcggtgtccgacacgcgtcagtgtccgacac 17651616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 119
Target Start/End: Complemental strand, 18422027 - 18421986
Alignment:
Q  78 gtgtccgacaccgacacatgtaattacactgaattttgtgat 119  Q
    |||| |||||||||||| ||||||||||||||||| ||||||    
T  18422027 gtgttcgacaccgacacttgtaattacactgaattatgtgat 18421986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 122
Target Start/End: Original strand, 20922922 - 20922967
Alignment:
Q  77 cgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||||||| ||||||| |||||||||| |||| |||||||||    
T  20922922 cgtgtccgacacagacacatataattacactaaattatgtgatttt 20922967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 27286222 - 27286291
Alignment:
Q  24 tatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgaca 93  Q
    |||||||||| ||||||| |  ||||||   ||||||||||||||||| | ||||||||||||| |||||    
T  27286222 tatgaagcacagacactctttagattagatatgtcccggtgtcggacatgtgtcgtgtccgacatcgaca 27286291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 32749752 - 32749825
Alignment:
Q  21 atctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    ||||||||||| | |||||||||  ||| ||||||||||| |||||||||||  |||  |||||||| ||||||    
T  32749752 atctatgaagcgcggacactccttagataaggcgtgtcccagtgtcggacacatgtcacgtccgacatcgacac 32749825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 52
Target Start/End: Original strand, 44770143 - 44770172
Alignment:
Q  23 ctatgaagcactgacactcctcggattagg 52  Q
    ||||||||||||||||||||||||||||||    
T  44770143 ctatgaagcactgacactcctcggattagg 44770172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 189
Target Start/End: Complemental strand, 18276514 - 18276466
Alignment:
Q  141 tcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcata 189  Q
    |||||||| || |||| |||||||| |||||| ||||||||||||||||    
T  18276514 tcagtgtctgtatcgtgtccggtgtccgtgtctgtatccgtgcttcata 18276466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 122
Target Start/End: Complemental strand, 18571068 - 18570992
Alignment:
Q  46 gattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||||||||| ||||||||| | |  |||||| |||||| ||||||| | |||||| |||||| ||| |||||    
T  18571068 gattaggcgtgtcctggtgtcggatatgtatcgtgttcgacactgacacatatgattacattgaattatgtcatttt 18570992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 19536361 - 19536397
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcc 59  Q
    ||||||||||  |||||||||||||||||||||||||    
T  19536361 ctatgaagcatggacactcctcggattaggcgtgtcc 19536397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 91
Target Start/End: Original strand, 19580225 - 19580293
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccga 91  Q
    ||||||||||| ||||||| |||||||||  ||||   ||||| ||||||| || ||||||||||||||    
T  19580225 ctatgaagcacagacactcttcggattagatgtgttttggtgttggacacgtgttgtgtccgacaccga 19580293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 190
Target Start/End: Original strand, 27447084 - 27447116
Alignment:
Q  158 tccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    |||||||| ||||||||||||||||||||||||    
T  27447084 tccggtgtccgtgtccgtatccgtgcttcatag 27447116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 190
Target Start/End: Complemental strand, 28412346 - 28412294
Alignment:
Q  138 gtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    |||| |||||||||||||| || ||||| ||||||| ||| ||||||||||||    
T  28412346 gtgttagtgtccgtgtcgtgtctggtgtccgtgtccatattcgtgcttcatag 28412294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 32321389 - 32321341
Alignment:
Q  21 atctatgaagcactgacactcctcggattaggcgtgtcccggtgtcgga 69  Q
    ||||| |||||||  | |||||| |||||||||||||||||||||||||    
T  32321389 atctaagaagcacaaatactccttggattaggcgtgtcccggtgtcgga 32321341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 123
Target Start/End: Complemental strand, 33153483 - 33153443
Alignment:
Q  83 cgacaccgacacatgtaattacactgaattttgtgattttt 123  Q
    |||||| ||||| ||||||||||||||||| ||||||||||    
T  33153483 cgacacggacacttgtaattacactgaattatgtgattttt 33153443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #88
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 43585984 - 43586044
Alignment:
Q  62 gtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||| ||||||  ||||||||||||||||||| ||| |||||| |||||| ||| |||||    
T  43585984 gtgtctgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcatttt 43586044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 20 - 190
Target Start/End: Complemental strand, 8920 - 8742
Alignment:
Q  20 gatctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgat 119  Q
    |||||||||||||| || ||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||| |||  | ||||    
T  8920 gatctatgaagcacggagactcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaataatatgat 8821  T
Q  120 ttttacaaattctttgct--------gtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    |||| |||||| || |||        ||||||||||||||||||| |||||||| ||||||||||||| ||||||||||    
T  8820 tttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgtccgtatccatgcttcatag 8742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 84; Significance: 5e-40; HSPs: 91)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 36450694 - 36450801
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||    
T  36450694 ctatgaagcacagacactcctcggattaggcgtgtcctggtgtcggacacgcgtcgtgtccgacacctacacttgtaattacactgaattctgtgatttt 36450793  T
Q  123 tacaaatt 130  Q
    | ||||||    
T  36450794 ttcaaatt 36450801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 23 - 190
Target Start/End: Original strand, 3951476 - 3951644
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||||| || |||||| ||||||||||||| || ||||| |||||| |||||||| ||||||||||||| ||| ||||||| |||||||||||||    
T  3951476 ctatgaagcacggaaactccttggattaggcgtgttcccgtgtcagacacgtgtcgtgtctgacaccgacacatataagtacactgcattttgtgatttt 3951575  T
Q  123 t---acaaattctttgctgtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    |   | |||||  | |||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||    
T  3951576 ttttaaaaatt--tagctgtgtcggtgtccgtgtcgtatctggtgtccgtgtccgtatccgtgcttcatag 3951644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 23 - 190
Target Start/End: Original strand, 29510233 - 29510419
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccg-----------acaccgacacatgtaattacactgaat 111  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||           |||||||||| |||||||| |||||||    
T  29510233 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacactacaccgacacttgtaattatactgaat 29510332  T
Q  112 tttgtgatttttacaaattctttgct--------gtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    |||||||||||| |||||| || |||        ||||||||||||||||||| |||||||| | |||| |||||||||||||||||    
T  29510333 tttgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccatgtcagtatccgtgcttcatag 29510419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 26 - 148
Target Start/End: Complemental strand, 40332307 - 40332185
Alignment:
Q  26 tgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttttac 125  Q
    |||| ||| |||||||||||||||||||| |||||||||| ||||||| ||||||||| |||||||||| ||||||||||||||||| |||||||||  |    
T  40332307 tgaaacacggacactcctcggattaggcgcgtcccggtgtgggacacgtgtcgtgtcccacaccgacacttgtaattacactgaattatgtgattttctc 40332208  T
Q  126 aaattctttgctgtgtcagtgtc 148  Q
    ||||| ||||| ||||| |||||    
T  40332207 aaattatttgcagtgtccgtgtc 40332185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 23 - 175
Target Start/End: Complemental strand, 8343086 - 8342939
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||      ||| |||||||||||| |||||||||||| |||| |||||||||    
T  8343086 ctatgaagcacagacactcttcggattaggcgtgtcccggtgtcggacaca-----tgtacgacaccgacacttgtaattacactaaattatgtgatttt 8342992  T
Q  123 tacaaattctttgctgtgtcagtgtccgtgtcgtatccggtgttcgtgtccgt 175  Q
    | |||||| || ||| |||| ||||| ||||||| |||| ||| |||||||||    
T  8342991 ttcaaattattagctatgtcggtgtcagtgtcgtgtccgatgtccgtgtccgt 8342939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 25 - 189
Target Start/End: Original strand, 926730 - 926902
Alignment:
Q  25 atgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgattttta 124  Q
    ||||||||| |||||||||||||| | || ||||||||||||||||||| |||| ||||||||||||||| | |||||||||||||   || ||||||      
T  926730 atgaagcacggacactcctcggataaagcatgtcccggtgtcggacacgtgtcgcgtccgacaccgacacttataattacactgaacaatgagattttct 926829  T
Q  125 caaattct--------ttgctgtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcata 189  Q
    |||||| |        |||  ||||||||||||||||||| |||||||| ||||| |||||||||||||||||    
T  926830 caaattattaggagtgttggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgttcgtatccgtgcttcata 926902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 27 - 142
Target Start/End: Complemental strand, 5813707 - 5813592
Alignment:
Q  27 gaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttttaca 126  Q
    ||||||| ||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||||| || | ||||| |||| ||    
T  5813707 gaagcacggacactcctccaattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtatttacactaaaatatgtgactttttca 5813608  T
Q  127 aattctttgctgtgtc 142  Q
    |||| || ||||||||    
T  5813607 aattattagctgtgtc 5813592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 190
Target Start/End: Original strand, 43737752 - 43737928
Alignment:
Q  24 tatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgattttt 123  Q
    |||||||||| ||||||||| |||| |||||| |||| ||||| |||||  |||||||||||||||||||||| ||||||||||| |||||||||||||     
T  43737752 tatgaagcacggacactccttggataaggcgtatccccgtgtcagacacctgtcgtgtccgacaccgacacatataattacactgtattttgtgattttc 43737851  T
Q  124 a--caaatt---ctttgc-----tgtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    |   |||||   || |||     |||||| ||||||||||||| |||||||| |||||| |||||||||||||||||    
T  43737852 aagaaaatttagctgtgccggcgtgtgtcggtgtccgtgtcgtgtccggtgtccgtgtctgtatccgtgcttcatag 43737928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 23 - 192
Target Start/End: Complemental strand, 22652106 - 22651918
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccg-----------acacatgtaattacactgaat 111  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||           |||| |||||||| | |||||    
T  22652106 ctatgaagcacggacactcctcggattagacgtgtcccggtgtcggacacatgtcgtgtccgacaccgacacgacaccgacacttgtaattatattgaat 22652007  T
Q  112 tttgtgatttttacaaattctttgct--------gtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatagct 192  Q
    | |||||||||| |||||| || |||        ||||||||||||||||||| ||||||||  |||||||||||||| ||||||||||    
T  22652006 tatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtcagtgtccgtatccgtacttcatagct 22651918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 25 - 161
Target Start/End: Complemental strand, 3025668 - 3025532
Alignment:
Q  25 atgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgattttta 124  Q
    ||||||||| ||||||||||||||||| |||||| | ||||| |||||| |||||||||||||| ||||| | ||||||||||||||| |||||||||      
T  3025668 atgaagcacggacactcctcggattagccgtgtcacagtgtcagacacgtgtcgtgtccgacactgacacctataattacactgaattatgtgattttct 3025569  T
Q  125 caaattctttgctgtgtcagtgtccgtgtcgtatccg 161  Q
    |||||| || ||  || | |||||||||| |||||||    
T  3025568 caaattattagcaatgccggtgtccgtgttgtatccg 3025532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 23 - 190
Target Start/End: Original strand, 16641909 - 16642081
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtc-----cgacaccgacacatgtaattacactgaattttgtg 117  Q
    ||||||||||| |||||||||||||||||| ||||||||||||  |||||  ||||||||     |||||||||||||| |||  ||||| |||| ||||    
T  16641909 ctatgaagcacagacactcctcggattaggtgtgtcccggtgttagacacatgtcgtgtccgacacgacaccgacacatataacgacactaaattatgtg 16642008  T
Q  118 atttttacaaattctttgctgtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
      |||  |||||| || | |||||||||||| ||||||| ||||| || ||| ||||||||||||||||||||    
T  16642009 tatttctcaaattattagttgtgtcagtgtctgtgtcgtgtccggcgtccgtatccgtatccgtgcttcatag 16642081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 23 - 123
Target Start/End: Complemental strand, 18407838 - 18407738
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||||| ||||||||||  |||||||||||||  |||||||||| | |||||||||| || |||||| ||||||||||||||||| |||||||||    
T  18407838 ctatgaagcacggacactcctccaattaggcgtgtcctagtgtcggacatgtgtcgtgtccggcagcgacacttgtaattacactgaattatgtgatttt 18407739  T
Q  123 t 123  Q
    |    
T  18407738 t 18407738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 23 - 122
Target Start/End: Complemental strand, 14134818 - 14134719
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||| ||| ||||||||||| ||||||||||||| |||| |||||||| |||||||  |||||||||| || ||||||||||||||| |||||||||    
T  14134818 ctatgaaacacggacactcctcgaattaggcgtgtcctggtgacggacacgtgtcgtgtttgacaccgacatatataattacactgaattatgtgatttt 14134719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 123
Target Start/End: Complemental strand, 31557116 - 31557015
Alignment:
Q  22 tctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgattt 121  Q
    ||||||| |||  ||||| ||| ||||||||||||||| ||||||||||| | |||||||| |||||||| || ||||||||||||||||| ||||||||    
T  31557116 tctatgaggcatggacacaccttggattaggcgtgtcctggtgtcggacatgtgtcgtgtctgacaccgaaacttgtaattacactgaattatgtgattt 31557017  T
Q  122 tt 123  Q
    ||    
T  31557016 tt 31557015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 21 - 192
Target Start/End: Complemental strand, 25566951 - 25566785
Alignment:
Q  21 atctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatt 120  Q
    ||||||||||||| ||||||||||||||||||||||||||||   |  |||           |||||||||||| ||||||||||||||||| |||||||    
T  25566951 atctatgaagcacagacactcctcggattaggcgtgtcccggacaccaaca-----------cgacaccgacacttgtaattacactgaattatgtgatt 25566863  T
Q  121 tttacaaattctttgctgtgtcagtgtccgtgtcgtatccggtgttcgtg------tccgtatccgtgcttcatagct 192  Q
    ||| |||||| || |||||||||||||| ||||| | ||||||||  |||      ||||||||||||||||||||||    
T  25566862 ttttcaaattattagctgtgtcagtgtctgtgtcatgtccggtgtctgtgtctatatccgtatccgtgcttcatagct 25566785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 23 - 190
Target Start/End: Original strand, 24413499 - 24413675
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||||| |||||| |||||||||| ||||||||| ||| |||||||| ||||||||||||| ||||| | ||||||| ||||||| |||  ||||    
T  24413499 ctatgaagcacggacacttctcggattagacgtgtcccgctgttggacacgcatcgtgtccgacactgacacttataattaccctgaattatgtattttt 24413598  T
Q  123 -tacaaattctttgc--------tgtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
     |  ||||| ||  |        | |||||||||||||||||| || ||||| ||||||||||||||||||||||||    
T  24413599 ctcaaaattattaacggtgtcagtatgtcagtgtccgtgtcgtgtctggtgtccgtgtccgtatccgtgcttcatag 24413675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 8343446 - 8343381
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacac 88  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||| |||||    
T  8343446 ctatgaagcacagacactcttcggattaggcgtgtcccggtgtcggacacgtgtcgtgtcggacac 8343381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 25 - 122
Target Start/End: Original strand, 20679337 - 20679434
Alignment:
Q  25 atgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||  |||||||||||| | |||||||||||||||||||||||| || | ||| ||||||||||| | ||||||||||||| | |||||||||    
T  20679337 atgaagcatggacactcctcggttaaggcgtgtcccggtgtcggacacgtgttgcgtctgacaccgacacttataattacactgaactatgtgatttt 20679434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 15816058 - 15816129
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||  || ||||||||||||||| ||||    
T  15816058 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggattcgtgtcgtgtccgacaccaacac 15816129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 189
Target Start/End: Complemental strand, 24858135 - 24857954
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacac-----cgacacatgtaattacactgaattttgtg 117  Q
    |||||||||||  ||||||||| ||||||||||||||||| || ||||||  ||||||||||||||     |||||| ||| ||||||||||||| ||||    
T  24858135 ctatgaagcacaaacactcctctgattaggcgtgtcccggcgtgggacacatgtcgtgtccgacacgacaacgacacttgt-attacactgaattatgtg 24858037  T
Q  118 a---tttttacaaattctttgctgtgtcag--------tgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcata 189  Q
    |   ||||| |||||| ||  ||||||| |        |||||||||||| |||||||||||||||||||||||| |||||||    
T  24858036 atttttttttcaaattattaactgtgtcggcgtgtccatgtccgtgtcgtgtccggtgttcgtgtccgtatccgttcttcata 24857954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 122
Target Start/End: Original strand, 33405324 - 33405423
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||| ||||| ||||||| | ||||||| ||||||| |||||| |||| | |||||||||||||||||||||| |||||||||| |||| |||| ||||    
T  33405324 ctatggagcacggacactcattggattagccgtgtccaggtgtcagacatgtgtcgtgtccgacaccgacacatataattacactaaattatgtgttttt 33405423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 34450961 - 34451032
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    ||||||||||| ||||||||| |||| ||||||||||| ||||| |||||| ||||||||||||||||||||    
T  34450961 ctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 34451032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 35 - 105
Target Start/End: Original strand, 126299 - 126369
Alignment:
Q  35 gacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattaca 105  Q
    ||||||||||||||||| ||||||||||| | ||||||| |||||||||||||| ||||||| ||||||||    
T  126299 gacactcctcggattagccgtgtcccggtattggacacgtgtcgtgtccgacactgacacatataattaca 126369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 23 - 96
Target Start/End: Complemental strand, 17751775 - 17751701
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtc-gtgtccgacaccgacacat 96  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||  | ||||| |||||||||||||||||||    
T  17751775 ctatgaagcgcggacactcctcggattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacacat 17751701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 23 - 96
Target Start/End: Complemental strand, 17760762 - 17760688
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtc-gtgtccgacaccgacacat 96  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||  | ||||| |||||||||||||||||||    
T  17760762 ctatgaagcgcggacactcctcggattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgacacat 17760688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 29447577 - 29447503
Alignment:
Q  20 gatctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    |||||||||||||| |||||||||| |||||| | ||||||||||||||||||  |||||||| |||||||||||    
T  29447577 gatctatgaagcacggacactcctccgattagacctgtcccggtgtcggacacatgtcgtgtctgacaccgacac 29447503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 23 - 122
Target Start/End: Original strand, 37283755 - 37283849
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||||| | ||||||||||||||| |||||||||||    |||||| ||||||||| |||||||||||  ||||||||||||||| |||||||||    
T  37283755 ctatgaagcacgggcactcctcggattagacgtgtcccggt---agacacgtgtcgtgtcccacaccgacaca--taattacactgaattatgtgatttt 37283849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 29447040 - 29447109
Alignment:
Q  24 tatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgaca 93  Q
    |||||||||| ||||||||| ||||||||||||||| |||||| |||||  |||||||||||||||||||    
T  29447040 tatgaagcacggacactcctaggattaggcgtgtcctggtgtcagacacatgtcgtgtccgacaccgaca 29447109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 4673354 - 4673418
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgaca 87  Q
    ||||||||||| ||||||||| ||||||||||||| ||||||||||| | |||||||||||||||    
T  4673354 ctatgaagcacagacactccttggattaggcgtgttccggtgtcggatatgcgtcgtgtccgaca 4673418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 54 - 130
Target Start/End: Complemental strand, 20873157 - 20873081
Alignment:
Q  54 gtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttttacaaatt 130  Q
    ||||| |||| |||||||||  ||||||||||||||||||| |||||||||||| |||| |||||||||| ||||||    
T  20873157 gtgtctcggtatcggacacgtatcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaatt 20873081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 35 - 83
Target Start/End: Original strand, 22943301 - 22943349
Alignment:
Q  35 gacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtcc 83  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  22943301 gacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtcc 22943349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 38487157 - 38487265
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtc-gtgtccgacaccgacacatgtaattacactgaattttgtgattt 121  Q
    ||||||||||| |||||||||||||||| | |||||| ||||||||||||||||| |||||||| ||| |||||  |||| ||||  |||| ||| ||||    
T  38487157 ctatgaagcacagacactcctcggattatgtgtgtccgggtgtcggacacgcgtcggtgtccgaaaccaacacacataatcacaccaaattatgtaattt 38487256  T
Q  122 ttacaaatt 130  Q
    || ||||||    
T  38487257 tttcaaatt 38487265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 24 - 95
Target Start/End: Original strand, 24205749 - 24205820
Alignment:
Q  24 tatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacaca 95  Q
    |||||| ||| ||||||||||||||||||||||| |||||||| |||| |||| |||| |||||||||||||    
T  24205749 tatgaaacacggacactcctcggattaggcgtgttccggtgtcagacatgcgttgtgttcgacaccgacaca 24205820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 76 - 130
Target Start/End: Complemental strand, 4948718 - 4948664
Alignment:
Q  76 tcgtgtccgacaccgacacatgtaattacactgaattttgtgatttttacaaatt 130  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||    
T  4948718 tcgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaatt 4948664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 39820547 - 39820482
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtc-gtgtccgacac 88  Q
    ||||||||||| |||||| ||||||||||||||||||| |||||||||||||||| |||||||||||    
T  39820547 ctatgaagcacggacacttctcggattaggcgtgtccc-gtgtcggacacgcgtcggtgtccgacac 39820482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 35 - 112
Target Start/End: Original strand, 15023209 - 15023286
Alignment:
Q  35 gacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaatt 112  Q
    ||||||||||||||||| ||||| || |  ||||||||| ||||| ||||||| |||||| |||||||||||||||||    
T  15023209 gacactcctcggattagacgtgttccagcatcggacacgtgtcgtatccgacatcgacacttgtaattacactgaatt 15023286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 53 - 122
Target Start/End: Complemental strand, 38079088 - 38079019
Alignment:
Q  53 cgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||| |||||||||||||| ||||||||||||||| |||| ||| ||||||||||||||  |||||||||    
T  38079088 cgtggcccggtgtcggacatgcgtcgtgtccgacatcgacgcatataattacactgaatcatgtgatttt 38079019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 4298830 - 4298933
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||||| |||||||||| |||||||||||||||| ||||| ||||| ||| | |  ||||||||||| |||||||||| | |||| |||||||||    
T  4298830 ctatgaagcac-gacactcctcagattaggcgtgtcccg-tgtcgaacacgtgtcatct--gacaccgacacttgtaattacattaaattatgtgatttt 4298925  T
Q  123 tacaaatt 130  Q
    | ||||||    
T  4298926 ttcaaatt 4298933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 142
Target Start/End: Original strand, 13436908 - 13437023
Alignment:
Q  21 atctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatt 120  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||| ||||| || |     |||||||||||| ||| |||||  |||||| |||||||    
T  13436908 atctatgaagcacagacactccttggattaggcgtgtcccggtgtc-gacac-cgac----acgacaccgacacttgttattaccatgaattatgtgatt 13437001  T
Q  121 tttacaaattctttgctgtgtc 142  Q
    ||| |||||| || ||||||||    
T  13437002 ttttcaaattattagctgtgtc 13437023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 44067644 - 44067580
Alignment:
Q  25 atgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtc-gtgtccgacac 88  Q
    ||||||||| ||||||||||| ||||||||||||| |||||||||||||| || |||||||||||    
T  44067644 atgaagcacggacactcctcgaattaggcgtgtcctggtgtcggacacgcatcagtgtccgacac 44067580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 21465542 - 21465471
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    ||||||||||| ||||||||||  ||||||||| |||| |||| ||||||| |||||||||||||| |||||    
T  21465542 ctatgaagcacggacactcctcaaattaggcgtatccctgtgttggacacgtgtcgtgtccgacactgacac 21465471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 24613585 - 24613516
Alignment:
Q  77 cgtgtccgacaccgacacatgtaattacactgaattttgtgatttttacaaattctttgctgtgtcagtgt 147  Q
    |||||||||||||||||| |||||||||||| |||| |||||||||| |||||| || |||||||| ||||    
T  24613585 cgtgtccgacaccgacacttgtaattacacttaattatgtgattttt-caaattattagctgtgtcggtgt 24613516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 26902103 - 26902169
Alignment:
Q  22 tctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacac 88  Q
    |||||||||||| |||||||||| ||| ||||||||||| ||| | |||||| ||||||||||||||    
T  26902103 tctatgaagcacggacactcctcagataaggcgtgtccccgtgccagacacgtgtcgtgtccgacac 26902169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 31109463 - 31109557
Alignment:
Q  28 aagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||| |||||||||||||||||||||||||| |||||  |||||   | |||||||||| ||||||| || ||| |||||||| | |||||||    
T  31109463 aagcacggacactcctcggattaggcgtgtcccagtgtcatacacgacacatgtccgacactgacacatatagttagactgaattgtttgatttt 31109557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 22197671 - 22197736
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacac 88  Q
    |||| |||||| |||||||||| |||||||||||  ||||||||||||||| ||| ||||||||||    
T  22197671 ctataaagcacggacactcctcagattaggcgtgatccggtgtcggacacgtgtcatgtccgacac 22197736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 96
Target Start/End: Original strand, 44462151 - 44462208
Alignment:
Q  39 ctcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacat 96  Q
    ||||||||||||| ||||||||||||||||||| |  ||||||| |||||||||||||    
T  44462151 ctcctcggattagacgtgtcccggtgtcggacatgtatcgtgtctgacaccgacacat 44462208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 96
Target Start/End: Original strand, 44469684 - 44469741
Alignment:
Q  39 ctcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacat 96  Q
    ||||||||||||| ||||||||||||||||||| |  ||||||| |||||||||||||    
T  44469684 ctcctcggattagacgtgtcccggtgtcggacatgtatcgtgtctgacaccgacacat 44469741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 83 - 192
Target Start/End: Original strand, 2572056 - 2572173
Alignment:
Q  83 cgacaccgacacatgtaattacactgaattttgtgatttttacaaattctttgct--------gtgtcagtgtccgtgtcgtatccggtgttcgtgtccg 174  Q
    |||||||||||| |||||||||||| |||| |||||||||| |||||| || | |        ||||| || |||||||||| ||| |||| ||||||||    
T  2572056 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaggtgtgtcgacgtgtcggtatccgtgtcgtgtccagtgtccgtgtccg 2572155  T
Q  175 tatccgtgcttcatagct 192  Q
    ||||| ||||||||||||    
T  2572156 tatccatgcttcatagct 2572173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 6065586 - 6065650
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgaca 87  Q
    ||||||||||| ||||||||| | |||| |||||| ||||||||||||| | |||||||||||||    
T  6065586 ctatgaagcacggacactccttgaattatgcgtgttccggtgtcggacatgtgtcgtgtccgaca 6065650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 8293931 - 8293855
Alignment:
Q  36 acactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaatt 112  Q
    ||||||||||||||||| |||||| |||||| || | | ||| |||  ||||||||||||| |||||||||||||||    
T  8293931 acactcctcggattaggtgtgtccaggtgtcagatatgtgtcatgtttgacaccgacacatataattacactgaatt 8293855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 11803389 - 11803317
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacaca 95  Q
    ||||||||||| ||||||||||||||||| ||||| || |||||||||| | ||||| ||| ||||| |||||    
T  11803389 ctatgaagcacggacactcctcggattagacgtgtacctgtgtcggacatgtgtcgtatccaacaccaacaca 11803317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 66 - 142
Target Start/End: Complemental strand, 22596070 - 22595994
Alignment:
Q  66 cggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttttacaaattctttgctgtgtc 142  Q
    |||||||| |||| |||||||||| |||| ||||||||||||||||| ||| ||||||  ||||| || ||||||||    
T  22596070 cggacacgtgtcgcgtccgacaccaacacttgtaattacactgaattatgttatttttttaaattattagctgtgtc 22595994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 75 - 158
Target Start/End: Complemental strand, 31514940 - 31514856
Alignment:
Q  75 gtcgtgtccgacaccgacacatgtaattacactgaattttgtgattttta-caaattctttgctgtgtcagtgtccgtgtcgtat 158  Q
    ||||||||| ||||| |||| |||| |||| ||||||| ||||||||||  |||||| || | ||||||||||||||||||||||    
T  31514940 gtcgtgtccaacaccaacacttgtagttacgctgaattatgtgatttttttcaaattattagttgtgtcagtgtccgtgtcgtat 31514856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 40064082 - 40064026
Alignment:
Q  22 tctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcg 78  Q
    |||||| ||||| |||||||||||||||||  ||||||||||||||||||| |||||    
T  40064082 tctatgtagcacggacactcctcggattagatgtgtcccggtgtcggacacacgtcg 40064026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 130
Target Start/End: Original strand, 41831887 - 41831987
Alignment:
Q  35 gacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacac-----cgacacatgtaattacactgaattttgtgatttttacaaat 129  Q
    ||||||||||| ||||| ||||||| | ||||||| |||  |||||||||||||     |||||| |||| |||||||||||| |||||||||| |||||    
T  41831887 gacactcctcgaattagacgtgtcctgttgtcggatacgtatcgtgtccgacaccaacacgacacttgtagttacactgaattatgtgattttttcaaat 41831986  T
Q  130 t 130  Q
    |    
T  41831987 t 41831987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 122
Target Start/End: Original strand, 4786330 - 4786377
Alignment:
Q  75 gtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||| |||||||||||||||| ||||||||||||||| |||||||||    
T  4786330 gtcgtatccgacaccgacacatataattacactgaattatgtgatttt 4786377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 28745628 - 28745557
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    ||||||||||| ||||||||| | ||||| | |||| ||||| |||||| | ||||||||||||||||||||    
T  28745628 ctatgaagcacggacactccttgaattagacttgtctcggtgacggacaggtgtcgtgtccgacaccgacac 28745557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 30067968 - 30068023
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcg 78  Q
    ||||||||||| ||||||| |||||||||| ||||||| ||||||||||| |||||    
T  30067968 ctatgaagcacggacactcatcggattaggtgtgtcccagtgtcggacacacgtcg 30068023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 2035866 - 2035812
Alignment:
Q  24 tatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcg 78  Q
    |||||||||| ||| || ||||||||||| || ||||||||||||||||||||||    
T  2035866 tatgaagcacggacgctactcggattaggtgtctcccggtgtcggacacgcgtcg 2035812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 123
Target Start/End: Complemental strand, 3677903 - 3677805
Alignment:
Q  25 atgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgattttt 123  Q
    |||||||| |||||||  ||||||||||||||||   |||||| || || || |||||| ||||||| |||| ||||||||  ||||| ||||||||||    
T  3677903 atgaagcagtgacacttttcggattaggcgtgtcttcgtgtcgaactcgtgttgtgtccaacaccgatacatataattacatagaattatgtgattttt 3677805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 138 - 192
Target Start/End: Complemental strand, 18964167 - 18964113
Alignment:
Q  138 gtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatagct 192  Q
    ||||||||||||||||||| || ||||| |||||||||||| ||||| |||||||    
T  18964167 gtgtcagtgtccgtgtcgtgtctggtgtccgtgtccgtatctgtgctacatagct 18964113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 147 - 193
Target Start/End: Original strand, 20785531 - 20785577
Alignment:
Q  147 tccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatagcta 193  Q
    |||||||||| | |||||| |||||||||||||||||||||||||||    
T  20785531 tccgtgtcgtgtacggtgtccgtgtccgtatccgtgcttcatagcta 20785577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 122
Target Start/End: Original strand, 31580080 - 31580166
Alignment:
Q  36 acactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||| |||||||||||| ||||  |||||||| ||| | |||| |||||||| |||||| | |||||||||| |||| |||||||||    
T  31580080 acacccctcggattaggtgtgtttcggtgtcgaacatgtgtcgcgtccgacatcgacacctataattacactcaattatgtgatttt 31580166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 91
Target Start/End: Original strand, 12570437 - 12570506
Alignment:
Q  22 tctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccga 91  Q
    ||||| |||||| |||| || || |||||||||||||| ||||||||||||| || ||||| ||||||||    
T  12570437 tctataaagcacggacaatcttcagattaggcgtgtcctggtgtcggacacgtgtagtgtctgacaccga 12570506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 91
Target Start/End: Original strand, 12570663 - 12570732
Alignment:
Q  22 tctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccga 91  Q
    ||||| |||||| |||| || || |||||||||||||| ||||||||||||| || ||||| ||||||||    
T  12570663 tctataaagcacggacaatcttcagattaggcgtgtcctggtgtcggacacgtgtagtgtctgacaccga 12570732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 13397670 - 13397617
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgt 76  Q
    ||||||||||| ||||||||| | |||||||||||| |||||||||||| ||||    
T  13397670 ctatgaagcacggacactccttgaattaggcgtgtctcggtgtcggacatgcgt 13397617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 156
Target Start/End: Original strand, 13844591 - 13844671
Alignment:
Q  78 gtgtccgacaccgacacatgtaattacactgaattttgtgatttttacaaattctttgctgtgtc--agtgtccgtgtcgt 156  Q
    ||||||||||||||||||| |||||||||| |||| |||||||||  |||||| || || |||||   |||||||||||||    
T  13844591 gtgtccgacaccgacacatataattacactcaattatgtgattttctcaaattattagcagtgtcggcgtgtccgtgtcgt 13844671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 191
Target Start/End: Original strand, 24362265 - 24362318
Alignment:
Q  138 gtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatagc 191  Q
    ||||| ||||| |||||||||||||||| ||| |||||||| ||||||||||||    
T  24362265 gtgtcggtgtctgtgtcgtatccggtgtccgtatccgtatctgtgcttcatagc 24362318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 72
Target Start/End: Complemental strand, 27213644 - 27213595
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacac 72  Q
    ||||||||||| |||||| |||||||||| |||||||||||||| |||||    
T  27213644 ctatgaagcacggacacttctcggattagccgtgtcccggtgtccgacac 27213595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 16988030 - 16987990
Alignment:
Q  25 atgaagcactgacactcctcggattaggcgtgtcccggtgt 65  Q
    ||||||||| |||||||||||||||||| ||||||||||||    
T  16988030 atgaagcacggacactcctcggattaggggtgtcccggtgt 16987990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 27067231 - 27067300
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    ||||||||||| ||||||||||||||||| |  || |||||||  |||||  ||||||||||||||||||||    
T  27067231 ctatgaagcacggacactcctcggattagac--gttccggtgttcgacacatgtcgtgtccgacaccgacac 27067300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 147
Target Start/End: Original strand, 34451037 - 34451101
Alignment:
Q  83 cgacaccgacacatgtaattacactgaattttgtgatttttacaaattctttgctgtgtcagtgt 147  Q
    |||||||||||||| ||||||||||| ||||||||||||| | |||   || |||||||||||||    
T  34451037 cgacaccgacacatataattacactgcattttgtgattttcaaaaaaaattagctgtgtcagtgt 34451101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 122
Target Start/End: Complemental strand, 34897149 - 34897105
Alignment:
Q  78 gtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||||| |||||||| ||||||||||||||| |||||||||    
T  34897149 gtgtccgacatcgacacatataattacactgaattatgtgatttt 34897105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 949205 - 949311
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||||||  ||| ||||| ||||||| ||||| |||||||||| | | ||||| |||| ||||||||||| ||| | |||| |||| | |||||||    
T  949205 ctatgaagcacgaacattcctcagattaggagtgtctcggtgtcggatatgtgtcgtatccggcaccgacacat-taactgcacttaattatttgatttt 949303  T
Q  123 tacaaatt 130  Q
    | ||||||    
T  949304 ttcaaatt 949311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 122
Target Start/End: Original strand, 11927086 - 11927125
Alignment:
Q  83 cgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||||||||| ||||||||||||||| |||||||||    
T  11927086 cgacaccgacacatataattacactgaattatgtgatttt 11927125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 11944796 - 11944749
Alignment:
Q  22 tctatgaagcactgacactcctcggattaggcgtgtcccggtgtcgga 69  Q
    ||||||||||||  |||||| |||||||||||||||| ||||||||||    
T  11944796 tctatgaagcacgaacactcatcggattaggcgtgtctcggtgtcgga 11944749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 13009423 - 13009493
Alignment:
Q  24 tatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtc-gtgtccgacaccgacac 94  Q
    |||||||||| ||| ||||| |||||||||||||||| |||||||||| ||||| ||||| |||||| ||||    
T  13009423 tatgaagcacggacgctccttggattaggcgtgtccc-gtgtcggacaggcgtcggtgtctgacacctacac 13009493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 142
Target Start/End: Original strand, 17468508 - 17468567
Alignment:
Q  83 cgacaccgacacatgtaattacactgaattttgtgatttttacaaattctttgctgtgtc 142  Q
    ||||||| |||| ||||||||||| | ||| ||||||||||||||||| |||| ||||||    
T  17468508 cgacaccaacacttgtaattacaccgcattatgtgatttttacaaattatttgttgtgtc 17468567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 122
Target Start/End: Original strand, 26902175 - 26902214
Alignment:
Q  83 cgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||||||||| ||||||||||||||| |||||||||    
T  26902175 cgacaccgacacatataattacactgaattatgtgatttt 26902214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 28819324 - 28819249
Alignment:
Q  20 gatctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacaca 95  Q
    ||||||||||||||  | |||||||||||||| ||||| ||||||| ||| ||   ||||||| ||||||||||||    
T  28819324 gatctatgaagcacatatactcctcggattagccgtgttccggtgttggatacatatcgtgtctgacaccgacaca 28819249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 58
Target Start/End: Complemental strand, 31514973 - 31514938
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtc 58  Q
    ||||||||||| ||||||||||||||||||||||||    
T  31514973 ctatgaagcacggacactcctcggattaggcgtgtc 31514938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 121
Target Start/End: Complemental strand, 8847315 - 8847277
Alignment:
Q  83 cgacaccgacacatgtaattacactgaattttgtgattt 121  Q
    |||||||||||||| ||||||||||||||| ||||||||    
T  8847315 cgacaccgacacatataattacactgaattatgtgattt 8847277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 57
Target Start/End: Complemental strand, 11833969 - 11833935
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgt 57  Q
    ||||||||||| |||||||||||||||||||||||    
T  11833969 ctatgaagcacagacactcctcggattaggcgtgt 11833935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 122
Target Start/End: Original strand, 31236570 - 31236616
Alignment:
Q  76 tcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||| ||||||||||| |||||||| |||||| |||||||||    
T  31236570 tcgtgtccgtcaccgacacatataattacattgaattatgtgatttt 31236616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #85
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 72
Target Start/End: Original strand, 8798805 - 8798842
Alignment:
Q  35 gacactcctcggattaggcgtgtcccggtgtcggacac 72  Q
    ||||||||| ||||||||||||| ||||||||||||||    
T  8798805 gacactccttggattaggcgtgttccggtgtcggacac 8798842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #86
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 13403225 - 13403172
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgt 76  Q
    ||||||||||| ||||||||| | |||| ||||||| |||||||||||| ||||    
T  13403225 ctatgaagcacggacactccttgaattaagcgtgtctcggtgtcggacatgcgt 13403172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #87
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 130
Target Start/End: Original strand, 30077385 - 30077434
Alignment:
Q  81 tccgacaccgacacatgtaattacactgaattttgtgatttttacaaatt 130  Q
    |||||||| ||||| ||||||||||||||||| |||||| ||| ||||||    
T  30077385 tccgacacggacacttgtaattacactgaattatgtgatgttttcaaatt 30077434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #88
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 147
Target Start/End: Complemental strand, 8343375 - 8343311
Alignment:
Q  83 cgacaccgacacatgtaattacactgaattttgtgatttttacaaattctttgctgtgtcagtgt 147  Q
    |||||| ||||| |||||||||||| |||| |||||||||| |||||| || ||| |||| ||||    
T  8343375 cgacactgacacttgtaattacactaaattatgtgattttttcaaattattagctatgtcggtgt 8343311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #89
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 11927014 - 11927050
Alignment:
Q  22 tctatgaagcactgacactcctcggattaggcgtgtc 58  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  11927014 tctatgaagcacggacactcatcggattaggcgtgtc 11927050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #90
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 14513108 - 14513180
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtc-gtgtccgacaccgacac 94  Q
    ||||||| ||| |||| | || |||||||| |||| ||||||||||||| ||||| ||||| |||||||||||    
T  14513108 ctatgaatcacagacaattcttggattaggtgtgttccggtgtcggacatgcgtcggtgtctgacaccgacac 14513180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #91
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 14639735 - 14639787
Alignment:
Q  28 aagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtg 80  Q
    |||||| || |||||| ||||||||| ||||||||||||||||| | ||||||    
T  14639735 aagcacagatactccttggattaggcatgtcccggtgtcggacatgtgtcgtg 14639787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 84; Significance: 5e-40; HSPs: 91)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 25 - 177
Target Start/End: Original strand, 21190998 - 21191158
Alignment:
Q  25 atgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgattttta 124  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||| ||||||||||||||||| ||||||||||     
T  21190998 atgaagcacggacactcctcggattaggcgtgtcccggagtcggacacgtgttgtgtccgacaccgacacttgtaattacactgaattatgtgatttttt 21191097  T
Q  125 caaattctttgctg--------tgtcagtgtccgtgtcgtatccggtgttcgtgtccgtat 177  Q
    |||||| || ||||        |||||||||||||||||| ||||||||  ||||||||||    
T  21191098 caaattattagctgtgtcggcatgtcagtgtccgtgtcgtgtccggtgtcagtgtccgtat 21191158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 23 - 141
Target Start/End: Original strand, 21576685 - 21576803
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||||| |||||||||||||||||||||||||| ||||| |||||| ||||||||||||| |||||| ||||||||||||||||| |||||||||    
T  21576685 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacatcgacacttgtaattacactgaattatgtgatttt 21576784  T
Q  123 tacaaattctttgctgtgt 141  Q
    | |||||| || |||||||    
T  21576785 ttcaaattattagctgtgt 21576803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 43565000 - 43564893
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||||| |||||| ||||||||||||||||||||| |||||||||  |||||||||||||||||||| | |||||||||| |||| |||||||||    
T  43565000 ctatgaagcacggacacttctcggattaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccgacacttataattacactaaattatgtgatttt 43564901  T
Q  123 tacaaatt 130  Q
    | ||||||    
T  43564900 tccaaatt 43564893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 22 - 147
Target Start/End: Complemental strand, 42893480 - 42893355
Alignment:
Q  22 tctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgattt 121  Q
    |||||||||||  ||||||||||  ||||||||||||| ||||||||||||| || ||||| ||||||||||| ||||||||||||| ||| ||||||||    
T  42893480 tctatgaagcatggacactcctcatattaggcgtgtcctggtgtcggacacgtgttgtgtctgacaccgacacttgtaattacactggattatgtgattt 42893381  T
Q  122 ttacaaattctttgctgtgtcagtgt 147  Q
    || |||||| || |||||||| ||||    
T  42893380 tttcaaattattagctgtgtcggtgt 42893355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 22 - 165
Target Start/End: Complemental strand, 31084448 - 31084298
Alignment:
Q  22 tctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacac-----cgacacatgtaattacactgaattttgt 116  Q
    |||||||| ||| ||||||||||||||||||| |||||| |||||||||||| ||||||||||||||     |||||| |||||||||| |||||| |||    
T  31084448 tctatgaaccacggacactcctcggattaggcatgtcccagtgtcggacacgtgtcgtgtccgacacgacatcgacacttgtaattacattgaattatgt 31084349  T
Q  117 gatttttacaaattctttgctgtgtc--agtgtccgtgtcgtatccggtgt 165  Q
    ||||||| |||||| || ||||||||   ||||| ||||||| ||||||||    
T  31084348 gattttttcaaattattagctgtgtcggcgtgtcagtgtcgtgtccggtgt 31084298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 34 - 190
Target Start/End: Complemental strand, 15382593 - 15382421
Alignment:
Q  34 tgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgt------ccgacaccgacacatgtaattacactgaattttgtga--tttttac 125  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||      ||||||||||||| |||||||| |||||||| | |||  ||||| |    
T  15382593 tgacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccaacaccgacaccgacacttgtaattatactgaattatatgattttttttc 15382494  T
Q  126 aaattctttgct--------gtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    ||||| || |||        |||||| |||||||||||| |||||||| ||||||||||||||||||||||||    
T  15382493 aaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtgtccgtatccgtgcttcatag 15382421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 23 - 147
Target Start/End: Original strand, 37328775 - 37328908
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgac-----------accgacacatgtaattacactgaat 111  Q
    ||||||||||| |||||||||||||||| |||| ||||||| ||||||  || |||||||||||           |||||||||||||||||||||||||    
T  37328775 ctatgaagcacggacactcctcggattaagcgtatcccggtatcggac--gcatcgtgtccgacaccgacacgacaccgacacatgtaattacactgaat 37328872  T
Q  112 tttgtgatttttacaaattctttgctgtgtcagtgt 147  Q
    ||||||||||||||||||| ||||||||||| ||||    
T  37328873 tttgtgatttttacaaattatttgctgtgtcggtgt 37328908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 23 - 190
Target Start/End: Complemental strand, 21522880 - 21522694
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac-----------atgtaattacactgaat 111  Q
    |||||| |||| ||||||| | |||||||||||||||||||| |||||||| ||||||||||||||||||||            ||||||||||||||||    
T  21522880 ctatgatgcacggacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaat 21522781  T
Q  112 tttgtgatttttacaaattctttgct--------gtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    | ||| ||||||  ||||| || |||        ||||||||||||||||||| |||||||  ||||||||||||||||||||||||    
T  21522780 tatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgaccgtgtccgtatccgtgcttcatag 21522694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 23 - 190
Target Start/End: Complemental strand, 21533446 - 21533260
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac-----------atgtaattacactgaat 111  Q
    |||||| |||| ||||||| | |||||||||||||||||||| |||||||| ||||||||||||||||||||            ||||||||||||||||    
T  21533446 ctatgatgcacggacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaat 21533347  T
Q  112 tttgtgatttttacaaattctttgct--------gtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    | ||| ||||||  ||||| || |||        ||||||||||||||||||| |||||||  ||||||||||||||||||||||||    
T  21533346 tatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgaccgtgtccgtatccgtgcttcatag 21533260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 23 - 144
Target Start/End: Complemental strand, 39698671 - 39698539
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccg-----------acacatgtaattacactgaat 111  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||| ||  ||||||||||||||||           |||| ||||||||||||||||    
T  39698671 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggatacatgtcgtgtccgacaccgacacgacactgacacttgtaattacactgaat 39698572  T
Q  112 tttgtgatttttacaaattctttgctgtgtcag 144  Q
    | |||||||||| |||||| || ||||||||||    
T  39698571 tatgtgattttttcaaattattagctgtgtcag 39698539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 25 - 122
Target Start/End: Original strand, 30502330 - 30502427
Alignment:
Q  25 atgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||||  ||| |||| ||||||||| |||||| |||||||||| | |||||||||||||||||||||| |||||||||||||||  ||||||||    
T  30502330 atgaagcacgaacaatccttggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattaagtgatttt 30502427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 25 - 122
Target Start/End: Original strand, 30542673 - 30542770
Alignment:
Q  25 atgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||||  ||| |||| ||||||||| |||||| |||||||||| | |||||||||||||||||||||| |||||||||||||||  ||||||||    
T  30542673 atgaagcacgaacaatccttggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattaagtgatttt 30542770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 23 - 122
Target Start/End: Complemental strand, 27932354 - 27932255
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||||||  |||||||||| ||||||||||||| |||||| |||||| ||||||||||||||| | |  ||||||||||||||||| ||| |||||    
T  27932354 ctatgaagcacaaacactcctcgaattaggcgtgtcctggtgtccgacacgtgtcgtgtccgacaccaagatttgtaattacactgaattatgtaatttt 27932255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 23 - 122
Target Start/End: Original strand, 28588614 - 28588713
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||||  ||||||| |||||||| |||||||| |||||| || | | |||||||||||||||||||| | ||||||||||||||| |||||||||    
T  28588614 ctatgaagcatggacactcttcggattaagcgtgtcctggtgtcagatatgtgtcgtgtccgacaccgacacctataattacactgaattatgtgatttt 28588713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 26 - 96
Target Start/End: Original strand, 39268541 - 39268611
Alignment:
Q  26 tgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacat 96  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||  ||||||||| ||||||||||||    
T  39268541 tgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacatgtcgtgtccaacaccgacacat 39268611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 25 - 130
Target Start/End: Complemental strand, 43001922 - 43001812
Alignment:
Q  25 atgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacac-----cgacacatgtaattacactgaattttgtgat 119  Q
    ||||||||| ||||||||||||||||||||||||| |||||  |||||| ||||||||||||||     | |||| ||||||||||||||||| ||| ||    
T  43001922 atgaagcacggacactcctcggattaggcgtgtccaggtgtttgacacgtgtcgtgtccgacacatcaccaacacttgtaattacactgaattatgtaat 43001823  T
Q  120 ttttacaaatt 130  Q
    |||| ||||||    
T  43001822 tttttcaaatt 43001812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 23 - 122
Target Start/End: Complemental strand, 14873641 - 14873537
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtcc-----gacaccgacacatgtaattacactgaattttgtg 117  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||||||| || | ||||     ||||||||||||| |||||||||| |||| ||||    
T  14873641 ctatgaagcacggacactcctcggattaggcgtgtcccggtgttggacacgtgttgcgtccgacatgacaccgacacatataattacactaaattatgtg 14873542  T
Q  118 atttt 122  Q
     ||||    
T  14873541 ctttt 14873537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 25 - 122
Target Start/End: Original strand, 18421779 - 18421880
Alignment:
Q  25 atgaagcactgacactcctcggattaggcgtgtc----ccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatt 120  Q
    ||||||||| ||||||||||||||||| ||||||    |||||| |||||| | |||||||||||| ||||||||| ||||||||||| ||| |||||||    
T  18421779 atgaagcacagacactcctcggattagacgtgtcagtcccggtgccggacatgtgtcgtgtccgacgccgacacatataattacactggattatgtgatt 18421878  T
Q  121 tt 122  Q
    ||    
T  18421879 tt 18421880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 26312875 - 26312799
Alignment:
Q  36 acactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaatt 112  Q
    ||||||||||||||||| |||||| |||||| ||||||  |||||||||||||||| |||| |||||||||||||||    
T  26312875 acactcctcggattaggtgtgtcctggtgtcagacacgtatcgtgtccgacaccgatacatataattacactgaatt 26312799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 83 - 190
Target Start/End: Original strand, 6471889 - 6471996
Alignment:
Q  83 cgacaccgacacatgtaattacactgaattttgtgatttttacaaattctttgctgtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtg 182  Q
    ||||||| |||||| ||||||||||||||| |||||||||  |||||| || || ||||||||||||||||| | |||||| |  ||||| ||| |||||    
T  6471889 cgacacccacacatataattacactgaattatgtgattttctcaaattattagccgtgtcagtgtccgtgtcatgtccggtttctgtgtctgtaaccgtg 6471988  T
Q  183 cttcatag 190  Q
    ||||||||    
T  6471989 cttcatag 6471996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 7677835 - 7677764
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||||| | | |||||| |||||||||||    
T  7677835 ctatgaagcaccgactctcctcggattaggcgtgtcccggtgtcggacatgtgacgtgtcagacaccgacac 7677764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 122
Target Start/End: Original strand, 21194063 - 21194162
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||| |||||| |||||||||||||||||||||| ||||||||| |||| | ||||||||| ||||| | || | ||||||||||||||  |||||||||    
T  21194063 ctataaagcacggacactcctcggattaggcgtgccccggtgtctgacatgtgtcgtgtccaacaccaatacctataattacactgaatgatgtgatttt 21194162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 21542159 - 21542089
Alignment:
Q  24 tatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    ||||| |||| |||| |||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  21542159 tatgatgcacggacattccttggattcggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacac 21542089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 185
Target Start/End: Original strand, 13287399 - 13287509
Alignment:
Q  83 cgacaccgacacatgtaattacactgaattttgtgatttttacaaattctttgctgtgtc--------agtgtccgtgtcgtatccggtgttcgtgtccg 174  Q
    |||||||||||| |||| |||||||||||| |||||||||| |||||| ||  |||||||        |||||||||||||| |||||||| ||||||||    
T  13287399 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattatctgtgtcgacgtgttagtgtccgtgtcgtgtccggtgtccgtgtccg 13287498  T
Q  175 tatccgtgctt 185  Q
    |||||||||||    
T  13287499 tatccgtgctt 13287509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 27 - 112
Target Start/End: Original strand, 30098982 - 30099067
Alignment:
Q  27 gaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaatt 112  Q
    |||||||  |||||||| |||| ||||||||||| ||||| |||||| ||||| |||||||||||||||| ||||||||| |||||    
T  30098982 gaagcacgaacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtatccgacaccgacacatataattacacagaatt 30099067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 32766870 - 32767049
Alignment:
Q  21 atctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccg-----------acacatgtaattacactga 109  Q
    ||||||||||||| |||||||||| |||||| ||| ||| ||||||||||||| ||||| | ||||||||           |||||| |||||||| |||    
T  32766870 atctatgaagcacggacactcctcagattagacgtatcctggtgtcggacacgtgtcgttttcgacaccgacacgacacaaacacatataattacattga 32766969  T
Q  110 attttgtgatttttacaaattctttgctgtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcata 189  Q
    ||| || ||||||  |||||| || || ||||| ||||||||||||| ||| ||||  ||||  ||||||||||||||||    
T  32766970 attgtgcgattttctcaaattattagcggtgtcggtgtccgtgtcgtgtccagtgtctgtgtttgtatccgtgcttcata 32767049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 85 - 190
Target Start/End: Original strand, 17177025 - 17177138
Alignment:
Q  85 acaccgacacatgtaattacactgaattttgtgatttttacaaattctttgctgtgt--------cagtgtccgtgtcgtatccggtgttcgtgtccgta 176  Q
    |||||||||| |||||||||| |||||||| |||||||| |||||| || |||||||        ||||||||| |||||||| |||||  |||||||||    
T  17177025 acaccgacacttgtaattacaatgaattttttgattttttcaaattattagctgtgttggcgtatcagtgtccgagtcgtatctggtgtctgtgtccgta 17177124  T
Q  177 tccgtgcttcatag 190  Q
    ||||||||||||||    
T  17177125 tccgtgcttcatag 17177138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 23 - 102
Target Start/End: Complemental strand, 17123166 - 17123088
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaatt 102  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||| |  |||||||| ||||||||| || |||||    
T  17123166 ctatgaagcacggacactcctcggattaggcgtgtccc-gtgtcggacatgtttcgtgtccaacaccgacatatataatt 17123088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 22 - 87
Target Start/End: Original strand, 19820327 - 19820389
Alignment:
Q  22 tctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgaca 87  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||||||   |||||||||||||    
T  19820327 tctatgaagcacggacactcctctgattaggcgtgtcccggtgtcggaca---gtcgtgtccgaca 19820389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 23 - 122
Target Start/End: Complemental strand, 42029871 - 42029772
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||| |||| |||||||||||||| |||||||||   ||| | |||| | ||||||||||||||||| |||| |||||||| |||||| |||||||||    
T  42029871 ctatgatgcacggacactcctcggataaggcgtgtctacgtgacagacatgtgtcgtgtccgacaccgatacatataattacattgaattatgtgatttt 42029772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 122
Target Start/End: Original strand, 23015926 - 23016028
Alignment:
Q  25 atgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacac-----cgacacatgtaattacactgaattttgtgat 119  Q
    ||||||| | ||||||||||||||||||||||||||  ||||||||||  ||||||||||| ||     |||||| | ||||||||||||||| ||||||    
T  23015926 atgaagctcggacactcctcggattaggcgtgtcccaatgtcggacacatgtcgtgtccgatacaacatcgacacctataattacactgaattatgtgat 23016025  T
Q  120 ttt 122  Q
    |||    
T  23016026 ttt 23016028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 4105379 - 4105282
Alignment:
Q  22 tctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgat 119  Q
    |||| ||||||| |||||||||||||||||||||||||| || || |||||   ||| ||| || ||| |||| ||||||||||||||||| ||||||    
T  4105379 tctacgaagcacggacactcctcggattaggcgtgtcccagtatcagacacatatcgagtctgatacctacacttgtaattacactgaattatgtgat 4105282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 77 - 130
Target Start/End: Complemental strand, 6247687 - 6247634
Alignment:
Q  77 cgtgtccgacaccgacacatgtaattacactgaattttgtgatttttacaaatt 130  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||| ||||||    
T  6247687 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaatt 6247634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 30098456 - 30098391
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacac 88  Q
    ||||||||||| |||| ||||||||||||| |||||| |||||| |||||| ||||||||||||||    
T  30098456 ctatgaagcacggacattcctcggattaggtgtgtcctggtgtctgacacgtgtcgtgtccgacac 30098391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 32630675 - 32630764
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaatt 112  Q
    ||||||||||  ||||||||||| |||||| ||||| |  ||||||||||| ||||| |||||||| ||||||| |||||||| ||||||    
T  32630675 ctatgaagcatagacactcctcgaattaggtgtgtctcaatgtcggacacgtgtcgtatccgacactgacacatataattacattgaatt 32630764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 15884055 - 15884007
Alignment:
Q  75 gtcgtgtccgacaccgacacatgtaattacactgaattttgtgattttt 123  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  15884055 gtcgtgtccgacaccgacacttgtaattacactgaattatgtgattttt 15884007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 16304366 - 16304438
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacaca 95  Q
    ||||||||||| |||| |||||||||||| |||||| ||||||||| |||| ||||||||||| || ||||||    
T  16304366 ctatgaagcacggacattcctcggattagacgtgtctcggtgtcgggcacgtgtcgtgtccgatactgacaca 16304438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 192
Target Start/End: Complemental strand, 19579818 - 19579643
Alignment:
Q  36 acactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccg-----------acaccgacacatgtaattacactgaattttgtgattttta 124  Q
    ||||||||||||||||||||||||||||||  ||||   ||||||||||           |||||||||| ||||||| |||| |||| |||||||||      
T  19579818 acactcctcggattaggcgtgtcccggtgttagacatatgtcgtgtccgacactgacacgacaccgacacttgtaattgcactaaattatgtgattttct 19579719  T
Q  125 caaattctttgctgtg--------tcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatagct 192  Q
    |||||| || ||||||        ||||||||||||| |||||||||||  |||| ||||||||||||||||||||    
T  19579718 caaattattagctgtgtcggcgtatcagtgtccgtgttgtatccggtgtcggtgtacgtatccgtgcttcatagct 19579643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 38464313 - 38464361
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggaca 71  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  38464313 ctatgaagcacagacactcctcggattaggtgtgtcccggtgtcggaca 38464361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 94
Target Start/End: Complemental strand, 43554633 - 43554574
Alignment:
Q  35 gacactcctcggattaggcgtgtcccggtgtcggacacgcgtc-gtgtccgacaccgacac 94  Q
    |||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  43554633 gacacttctcggattaggcgtgtccc-gtgtcggacacgcgtcggtgtccgacaccgacac 43554574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 6401627 - 6401557
Alignment:
Q  24 tatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    |||||||||| ||||||||| |||| |||||| |||| ||||| |||||| |||||||||||||| |||||    
T  6401627 tatgaagcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacactgacac 6401557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 35 - 73
Target Start/End: Complemental strand, 17088398 - 17088360
Alignment:
Q  35 gacactcctcggattaggcgtgtcccggtgtcggacacg 73  Q
    |||||||||||||||||||||||||||||||||||||||    
T  17088398 gacactcctcggattaggcgtgtcccggtgtcggacacg 17088360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 73
Target Start/End: Complemental strand, 35017162 - 35017112
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacg 73  Q
    ||||||||||| ||||||||||||||||||||||||||| ||| |||||||    
T  35017162 ctatgaagcacggacactcctcggattaggcgtgtcccgatgttggacacg 35017112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 36642696 - 36642757
Alignment:
Q  27 gaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacacc 89  Q
    ||||||| ||||||||||  ||||||||||||||| ||||||||||| |||||||||||||||    
T  36642696 gaagcaccgacactcctccaattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacacc 36642757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 138 - 188
Target Start/End: Complemental strand, 41995467 - 41995417
Alignment:
Q  138 gtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcat 188  Q
    ||||||||||| ||||||||||| |||| ||||||||||||||||||||||    
T  41995467 gtgtcagtgtctgtgtcgtatccagtgtccgtgtccgtatccgtgcttcat 41995417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 2419986 - 2419914
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtc-gtgtccgacaccgacac 94  Q
    ||||||||||| ||||||| |||||||||| ||||||||| ||||||||||| || ||||| |||||| ||||    
T  2419986 ctatgaagcacggacactcatcggattaggtgtgtcccggggtcggacacgcatcggtgtctgacaccaacac 2419914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 18592200 - 18592132
Alignment:
Q  26 tgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    |||||||| ||||||| ||| ||||| ||||||||| |||| |||||| || |||||||||||||||||    
T  18592200 tgaagcacggacactcatcgaattagccgtgtcccgatgtcagacacgtgttgtgtccgacaccgacac 18592132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 190
Target Start/End: Complemental strand, 6770655 - 6770487
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||||| ||||||| ||||||||||||||| || |     |||| | |||||||||||||| |||||||  || ||||||||||| |||||||||    
T  6770655 ctatgaagcacggacactcttcggattaggcgtgtaccag-----gacatgtgtcgtgtccgacactgacacat--aagtacactgaattatgtgatttt 6770563  T
Q  123 tacaaattctttgctgtgtcagtgt--------ccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
       ||||| || | |||||||||||        ||||||| | | |||||| ||| ||||||||||||||||||||    
T  6770562 cttaaattattagttgtgtcagtgtgtcagtgtccgtgtcatgttcggtgtccgtatccgtatccgtgcttcatag 6770487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 187
Target Start/End: Complemental strand, 8420089 - 8419985
Alignment:
Q  80 gtccgacaccgacacatgtaattacactgaattttgtgatttttacaaattctttgctgtgtcagtgtccgtgtc-gtatccggtgttcgtgtccgtatc 178  Q
    ||||||||||||||| |||||||||| |||||| ||| |||||| |||||| || ||| |||| |    ||||||  | |||||||| ||||||||||||    
T  8420089 gtccgacaccgacacttgtaattacattgaattatgttattttttcaaattattagctatgtcgg----cgtgtcattgtccggtgtccgtgtccgtatc 8419994  T
Q  179 cgtgcttca 187  Q
    |||||||||    
T  8419993 cgtgcttca 8419985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 21814391 - 21814320
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    |||||||||||  ||| |||| |||| ||||||||||| ||| | |||||| ||||||||||||||||||||    
T  21814391 ctatgaagcacgaacattccttggataaggcgtgtccccgtgccagacacgtgtcgtgtccgacaccgacac 21814320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 30183675 - 30183620
Alignment:
Q  27 gaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtc 82  Q
    ||||||| |||||| |||| |||||||||||||| |||||||||||| ||||||||    
T  30183675 gaagcacagacacttctcgaattaggcgtgtcccagtgtcggacacgtgtcgtgtc 30183620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 73
Target Start/End: Complemental strand, 2437030 - 2436980
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacg 73  Q
    |||||||||||  |||||||||||||||||||||||  |||||||||||||    
T  2437030 ctatgaagcacgaacactcctcggattaggcgtgtcttggtgtcggacacg 2436980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 3966632 - 3966562
Alignment:
Q  24 tatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    |||||||||| ||||||||||||||||| ||||||||  ||| ||||||  || ||||||||||| |||||    
T  3966632 tatgaagcacggacactcctcggattagacgtgtccctctgttggacacatgttgtgtccgacactgacac 3966562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 96
Target Start/End: Original strand, 17393305 - 17393379
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtc-gtgtccgacaccgacacat 96  Q
    |||||||||||  ||| ||||||||||| | ||||||||||||||||||| |||| ||||||  |||||||||||    
T  17393305 ctatgaagcacgaacattcctcggattacgagtgtcccggtgtcggacacacgtcggtgtccaccaccgacacat 17393379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 73
Target Start/End: Original strand, 17593663 - 17593713
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacg 73  Q
    |||||||| || |||||||||||||||| |||||||||||||| |||||||    
T  17593663 ctatgaagtacggacactcctcggattaagcgtgtcccggtgttggacacg 17593713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 21351847 - 21351945
Alignment:
Q  20 gatctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgat 119  Q
    |||| ||||||||| ||||||| ||||||||| ||||| || ||||||||||| || | |    ||||||||||| ||||||||||||||||| |||||     
T  21351847 gatccatgaagcacggacactcttcggattagacgtgttccagtgtcggacac-cgacat----gacaccgacacttgtaattacactgaattatgtgac 21351941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 22423762 - 22423800
Alignment:
Q  21 atctatgaagcactgacactcctcggattaggcgtgtcc 59  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  22423762 atctatgaagcacggacactcctcggattaggcgtgtcc 22423800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 190
Target Start/End: Original strand, 23016060 - 23016106
Alignment:
Q  144 gtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    ||||||||||||| ||||| || ||||||||||||||||||||||||    
T  23016060 gtgtccgtgtcgtgtccggagtccgtgtccgtatccgtgcttcatag 23016106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 79 - 190
Target Start/End: Original strand, 24906297 - 24906416
Alignment:
Q  79 tgtccgacaccgacacatgtaattacactgaattttgtgatttttacaaattct--------ttgctgtgtcagtgtccgtgtcgtatccggtgttcgtg 170  Q
    ||||||| |||||||| ||||||||||||||||| ||| |||||| |||||| |        |||  |||||||||| |||||||| ||||||| |||||    
T  24906297 tgtccgataccgacacttgtaattacactgaattatgtcattttttcaaattattatctgtgttggcgtgtcagtgttcgtgtcgtgtccggtgctcgtg 24906396  T
Q  171 tccgtatccgtgcttcatag 190  Q
    || ||||| ||| |||||||    
T  24906397 tctgtatcggtgtttcatag 24906416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 122
Target Start/End: Original strand, 16203746 - 16203834
Alignment:
Q  25 atgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||| |||||||||||||||| |||||| |||||||         ||| |||||||||||||||||| |||||||||| |||| || ||||||    
T  16203746 atgaagcacagacactcctcggattaagcgtgtaccggtgt---------gtcttgtccgacaccgacacatataattacactaaattatgagatttt 16203834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 190
Target Start/End: Complemental strand, 20683370 - 20683325
Alignment:
Q  145 tgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    |||||||||||| |||||||| ||||||||||||||||||| ||||    
T  20683370 tgtccgtgtcgtgtccggtgtccgtgtccgtatccgtgctttatag 20683325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 123
Target Start/End: Complemental strand, 33178089 - 33178044
Alignment:
Q  78 gtgtccgacaccgacacatgtaattacactgaattttgtgattttt 123  Q
    ||||||||||||||||| |||||||||||| |||| ||||||||||    
T  33178089 gtgtccgacaccgacacttgtaattacactaaattatgtgattttt 33178044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 190
Target Start/End: Complemental strand, 34276854 - 34276801
Alignment:
Q  137 tgtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    ||||||| |||| ||||||| |||||| | ||||||||||||||||||||||||    
T  34276854 tgtgtcaatgtctgtgtcgtgtccggtatccgtgtccgtatccgtgcttcatag 34276801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 72
Target Start/End: Original strand, 39695951 - 39695999
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacac 72  Q
    ||||||||||| ||||||||| |||||||||||||||| |||||||||||    
T  39695951 ctatgaagcaccgacactcctaggattaggcgtgtccc-gtgtcggacac 39695999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 41558585 - 41558654
Alignment:
Q  20 gatctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtc-gtgtccgacac 88  Q
    |||||||||||||||||||||| ||  ||||||||| ||| |||||||| ||||| || |||||||||||    
T  41558585 gatctatgaagcactgacactcttcaaattaggcgtatcctggtgtcggtcacgcatctgtgtccgacac 41558654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 6326360 - 6326412
Alignment:
Q  138 gtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    ||||||||||||||||||| |||||| | ||||||| ||||| ||||||||||    
T  6326360 gtgtcagtgtccgtgtcgtgtccggtatccgtgtccttatccatgcttcatag 6326412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 190
Target Start/End: Complemental strand, 6401494 - 6401442
Alignment:
Q  138 gtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    ||||| ||||||||||||  |||||||| |||||| |||||||||||||||||    
T  6401494 gtgtcggtgtccgtgtcgcgtccggtgtccgtgtctgtatccgtgcttcatag 6401442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 108
Target Start/End: Original strand, 7997108 - 7997191
Alignment:
Q  25 atgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtc-gtgtccgacaccgacacatgtaattacactg 108  Q
    |||||||||  ||||| |||| |||||| |||||| | ||||||||||||||| |||||||||| |||||| | |||||||||||    
T  7997108 atgaagcacaaacacttctcgaattaggtgtgtcctgatgtcggacacgcgtcagtgtccgaca-cgacacttataattacactg 7997191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 10298669 - 10298633
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcc 59  Q
    ||||||||||| |||||||||||||||||||||||||    
T  10298669 ctatgaagcacggacactcctcggattaggcgtgtcc 10298633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 11686068 - 11686000
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccga 91  Q
    ||||||||||| |||||||||| |||||| |||| |  ||| | ||||||| |||||||||||||||||    
T  11686068 ctatgaagcacggacactcctccgattagccgtgccttggttttggacacgtgtcgtgtccgacaccga 11686000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 122
Target Start/End: Complemental strand, 23221083 - 23221003
Alignment:
Q  43 tcggattaggcgtgtcccggtgtcggacacgcgtcg-tgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||||||||||||| |||| |||||||| | | ||||| |||||||||||| | || ||||| |||| |||||||||    
T  23221083 tcggattaggcgtgtcccagtgttggacacgcattgatgtccaacaccgacacatatgataacactaaattatgtgatttt 23221003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 36642825 - 36642876
Alignment:
Q  138 gtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    ||||||||||||||||||| ||||||| || ||||||||||| ||||||||||    
T  36642825 gtgtcagtgtccgtgtcgtgtccggtg-tcttgtccgtatccatgcttcatag 36642876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 122
Target Start/End: Complemental strand, 3966562 - 3966523
Alignment:
Q  83 cgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||||||||| ||||||||||||||| |||||||||    
T  3966562 cgacaccgacacatataattacactgaattgtgtgatttt 3966523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 142
Target Start/End: Complemental strand, 7677764 - 7677705
Alignment:
Q  83 cgacaccgacacatgtaattacactgaattttgtgatttttacaaattctttgctgtgtc 142  Q
    |||||||||||| | ||||| ||||||||| |||||||||| |||||| || ||||||||    
T  7677764 cgacaccgacacttctaattgcactgaattatgtgattttttcaaattattagctgtgtc 7677705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 122
Target Start/End: Complemental strand, 21814320 - 21814281
Alignment:
Q  83 cgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||||||||| ||||||||||| |||||||||||||    
T  21814320 cgacaccgacacatataattacactgcattttgtgatttt 21814281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 122
Target Start/End: Original strand, 23012380 - 23012447
Alignment:
Q  55 tgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||||||| |||| | ||||||||| |||||||||||| |||||||| | |||| | |||||||    
T  23012380 tgtcccggtgtcagacatgtgtcgtgtccaacaccgacacatataattacattaaattatatgatttt 23012447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 142
Target Start/End: Complemental strand, 14674323 - 14674269
Alignment:
Q  88 ccgacacatgtaattacactgaattttgtgatttttacaaattctttgctgtgtc 142  Q
    ||||||| |||||||||||| |||| |||||||||| |||||| || ||||||||    
T  14674323 ccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 14674269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 105
Target Start/End: Complemental strand, 15086597 - 15086508
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcc------cggtgtcggacacgcgtc-gtgtccgacaccgacacatgtaattaca 105  Q
    ||||||||||  ||||||||||||||||||||||| |      |||||||||||| | ||| ||||| ||||||||||||| ||||||||    
T  15086597 ctatgaagcaaagacactcctcggattaggcgtgttccgatgtcggtgtcggacatgggtcggtgtcagacaccgacacatataattaca 15086508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 171
Target Start/End: Original strand, 41558745 - 41558779
Alignment:
Q  137 tgtgtcagtgtccgtgtcgtatccggtgttcgtgt 171  Q
    ||||||||||||||||||||||||||||| |||||    
T  41558745 tgtgtcagtgtccgtgtcgtatccggtgtccgtgt 41558779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 2548501 - 2548464
Alignment:
Q  21 atctatgaagcactgacactcctcggattaggcgtgtc 58  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  2548501 atctatgaagcacagacactcctcggattaggtgtgtc 2548464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 14674370 - 14674333
Alignment:
Q  21 atctatgaagcactgacactcctcggattaggcgtgtc 58  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  14674370 atctatgaagcacagacactcctcggattaggtgtgtc 14674333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 19552475 - 19552524
Alignment:
Q  22 tctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggaca 71  Q
    |||||||| ||| |||||||||||||||||| ||||||  ||||||||||    
T  19552475 tctatgaaacacggacactcctcggattaggtgtgtccaagtgtcggaca 19552524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 72
Target Start/End: Complemental strand, 32444898 - 32444849
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacac 72  Q
    ||||||||||||||||||| ||||||||| | |||||| ||||| |||||    
T  32444898 ctatgaagcactgacactcttcggattagacatgtccctgtgtctgacac 32444849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 36838652 - 36838615
Alignment:
Q  21 atctatgaagcactgacactcctcggattaggcgtgtc 58  Q
    ||||||||||||| ||||||||| ||||||||||||||    
T  36838652 atctatgaagcacagacactccttggattaggcgtgtc 36838615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 39206004 - 39205939
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacac 88  Q
    ||||||||||  ||||||||| ||||||  ||| |||||||||||| |||| |||||||| |||||    
T  39206004 ctatgaagcatagacactccttggattaaacgtatcccggtgtcgggcacgtgtcgtgtcggacac 39205939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 124
Target Start/End: Complemental strand, 14422968 - 14422920
Alignment:
Q  76 tcgtgtccgacaccgacacatgtaattacactgaattttgtgattttta 124  Q
    |||||||||||| ||| || | ||||||||||||||| |||||||||||    
T  14422968 tcgtgtccgacatcgaaacttataattacactgaattatgtgattttta 14422920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 123
Target Start/End: Original strand, 16374342 - 16374382
Alignment:
Q  83 cgacaccgacacatgtaattacactgaattttgtgattttt 123  Q
    ||||||||||||||||||||||||||| || ||| ||||||    
T  16374342 cgacaccgacacatgtaattacactgatttatgttattttt 16374382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #88
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 148
Target Start/End: Original strand, 24272996 - 24273095
Alignment:
Q  46 gattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttttacaaattctttgctgtgtcagt 145  Q
    |||||| ||||||| ||||||||| | | ||||||| | |||||   |||| ||||||||||||||| |||||||||  ||||||  |  ||||||||||    
T  24272996 gattagccgtgtccgggtgtcggatatgtgtcgtgtaccacacc---acatataattacactgaattatgtgattttctcaaattaataactgtgtcagt 24273092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #89
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 148
Target Start/End: Complemental strand, 24389218 - 24389119
Alignment:
Q  46 gattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttttacaaattctttgctgtgtcagt 145  Q
    |||||| ||||||| ||||||||| | | ||||||| | |||||   |||| ||||||||||||||| |||||||||  ||||||  |  ||||||||||    
T  24389218 gattagccgtgtccgggtgtcggatatgtgtcgtgtaccacacc---acatataattacactgaattatgtgattttctcaaattaataactgtgtcagt 24389122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #90
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 24906252 - 24906288
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcc 59  Q
    ||||||||||| ||||||||||| |||||||||||||    
T  24906252 ctatgaagcacggacactcctcgaattaggcgtgtcc 24906288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #91
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 39342549 - 39342513
Alignment:
Q  35 gacactcctcggattaggcgtgtcccggtgtcggaca 71  Q
    ||||||||| |||||||||||||||||||||| ||||    
T  39342549 gacactccttggattaggcgtgtcccggtgtctgaca 39342513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 7e-39; HSPs: 98)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 23 - 165
Target Start/End: Complemental strand, 55401194 - 55401044
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||| |||| |||||||||    
T  55401194 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgatttt 55401095  T
Q  123 tacaaattctttgctgtg--------tcagtgtccgtgtcgtatccggtgt 165  Q
    | |||||| || | ||||        |||||||||||||||||||||||||    
T  55401094 ttcaaattattagttgtgtcggcgtatcagtgtccgtgtcgtatccggtgt 55401044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 21 - 142
Target Start/End: Complemental strand, 20503586 - 20503465
Alignment:
Q  21 atctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatt 120  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||| | ||||||||| |||||||||| ||||||||||||||||| ||| |||    
T  20503586 atctatgaagcacggacactcctcggattaggcgtgtcccggtgtcagacatgtgtcgtgtccaacaccgacacttgtaattacactgaattatgtcatt 20503487  T
Q  121 tttacaaattctttgctgtgtc 142  Q
    ||| |||||| |||| ||||||    
T  20503486 ttttcaaattatttgttgtgtc 20503465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 23 - 123
Target Start/End: Original strand, 40993275 - 40993375
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||| |||||||||    
T  40993275 ctatgaagcatggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattatgtgatttt 40993374  T
Q  123 t 123  Q
    |    
T  40993375 t 40993375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 38 - 130
Target Start/End: Complemental strand, 10955056 - 10954964
Alignment:
Q  38 actcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttttacaaatt 130  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||| ||||||||||||| |||||||||| ||||||    
T  10955056 actcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgacaccgacacttgtgattacactgaattatgtgattttttcaaatt 10954964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 23 - 142
Target Start/End: Complemental strand, 27505370 - 27505246
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtc-----cgacaccgacacatgtaattacactgaattttgtg 117  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||     |||||||||||| |||||||||||| |||| ||||    
T  27505370 ctatgaagcacggacactcctcggattaggcatgtcccggtgtcggacacgtgtcgtgtcagacacgacaccgacacttgtaattacacttaattatgtg 27505271  T
Q  118 atttttacaaattctttgctgtgtc 142  Q
    ||||||| ||||| || ||||||||    
T  27505270 atttttaaaaattattagctgtgtc 27505246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 23 - 154
Target Start/End: Original strand, 51206293 - 51206424
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||||| ||||||||| |||||||  || |||||||||||||| ||    ||||||||||||||||| |||| |||||||||||| |||||||||    
T  51206293 ctatgaagcacggacactccttggattagaggtatcccggtgtcggacgcgacatgtgtccgacaccgacacttgtatttacactgaattatgtgatttt 51206392  T
Q  123 tacaaattctttgctgtgtcagtgtccgtgtc 154  Q
    | |||||| || ||||||||||||||||||||    
T  51206393 ttcaaattattagctgtgtcagtgtccgtgtc 51206424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 25 - 130
Target Start/End: Complemental strand, 28918120 - 28918013
Alignment:
Q  25 atgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtc--cgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||  ||||||||| |||||||||||||||| |||||||||||| ||||||||  |||||||||||| ||||||||||||||||| |||||||||    
T  28918120 atgaagcagggacactccttggattaggcgtgtcccagtgtcggacacgtgtcgtgtccacgacaccgacacttgtaattacactgaattatgtgatttt 28918021  T
Q  123 tacaaatt 130  Q
    | ||||||    
T  28918020 ttcaaatt 28918013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 22 - 156
Target Start/End: Complemental strand, 11252096 - 11251964
Alignment:
Q  22 tctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgattt 121  Q
    |||||||||||| ||||||||||||||||||||||| ||| || |||||||| || ||||| ||||||||||||  ||||||||||||||| ||||||||    
T  11252096 tctatgaagcacagacactcctcggattaggcgtgttccgatgccggacacgtgttgtgtctgacaccgacaca--taattacactgaattatgtgattt 11251999  T
Q  122 ttacaaattctttgctgtgtcagtgtccgtgtcgt 156  Q
    |  |||||| || ||  ||||||||||| ||||||    
T  11251998 tctcaaattattagcaatgtcagtgtccatgtcgt 11251964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 23 - 190
Target Start/End: Complemental strand, 7171620 - 7171446
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||||   |||||||| |||||||||||||| |||||||||||||| ||||||||||||||| |||| ||||||||||| ||||| | |||||||    
T  7171620 ctatgaagcatatacactccttggattaggcgtgtcgcggtgtcggacacgtgtcgtgtccgacaccaacacttgtaattacaccgaattatatgatttt 7171521  T
Q  123 tacaaattctttgctg--------tgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    | ||||||    ||||        ||||||| |||||||||| ||||||||  |||||||||||||||||||||||    
T  7171520 t-caaattacaagctgtgtcggcatgtcagtatccgtgtcgtgtccggtgtctgtgtccgtatccgtgcttcatag 7171446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 83 - 192
Target Start/End: Complemental strand, 14028066 - 14027957
Alignment:
Q  83 cgacaccgacacatgtaattacactgaattttgtgatttttacaaattctttgctgtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtg 182  Q
    |||||||||||||| ||||||||||| |||||||||||||   |||   || |||||||| ||||||||||||| |||||||| ||||||||||||||||    
T  14028066 cgacaccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggtgtccgtgtcgtgtccggtgtccgtgtccgtatccgtg 14027967  T
Q  183 cttcatagct 192  Q
    ||||||||||    
T  14027966 cttcatagct 14027957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 25 - 120
Target Start/End: Complemental strand, 25775624 - 25775531
Alignment:
Q  25 atgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatt 120  Q
    |||||||||  |||||||||||||||||||||||| |||||||||||  || |||||||||||||||||| ||||||||||||||||| |||||||    
T  25775624 atgaagcacgaacactcctcggattaggcgtgtcctggtgtcggaca--cgacgtgtccgacaccgacacttgtaattacactgaattatgtgatt 25775531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 122
Target Start/End: Original strand, 13845465 - 13845564
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||||| ||||||||| |||| ||||||||| | ||||| ||||||  ||||||||||||||||||||| ||||||||||| |||||||||||||    
T  13845465 ctatgaagcacggacactccttggataaggcgtgtctccgtgtcagacacgtctcgtgtccgacaccgacacatataattacactgcattttgtgatttt 13845564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 189
Target Start/End: Original strand, 15999951 - 16000130
Alignment:
Q  24 tatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgt------cgtgtccgacaccgacacatgtaattacactgaattttgtg 117  Q
    ||||| |||| ||||||||| ||||||||||||||||||||||||||||| ||      |||||||||||||||||| |||| |||||||||||| |||     
T  15999951 tatgatgcacggacactccttggattaggcgtgtcccggtgtcggacacgtgtcgtgtacgtgtccgacaccgacacttgtagttacactgaattatgtt 16000050  T
Q  118 atttttacaaattctttgct--------gtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcata 189  Q
    ||||||  ||||| || | |        ||||||||||| ||||||| | |||||| |||||||||||||||||||||||    
T  16000051 atttttttaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgttcggtgtccgtgtccgtatccgtgcttcata 16000130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 122
Target Start/End: Complemental strand, 35223057 - 35222958
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||||| |||||||||||||| | ||||||||| ||||| |||||| ||| |||||||||||||||||| |||||||| |||||| |||||||||    
T  35223057 ctatgaagcacggacactcctcggataaagcgtgtccccgtgtcagacacgtgtcatgtccgacaccgacacatataattacattgaattatgtgatttt 35222958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 8789489 - 8789589
Alignment:
Q  24 tatgaagcactgacactcctcggattaggcgtgtcccggtgtcggaca--cgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgattt 121  Q
    |||||||||| |||||||||||||||||||||||| ||||||| ||||   | |||||||||||||||||||||| ||||||||| ||||| ||||||||    
T  8789489 tatgaagcacggacactcctcggattaggcgtgtctcggtgtccgacatgtgtgtcgtgtccgacaccgacacatataattacacggaattatgtgattt 8789588  T
Q  122 t 122  Q
    |    
T  8789589 t 8789589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 22 - 123
Target Start/End: Complemental strand, 18427069 - 18426968
Alignment:
Q  22 tctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgattt 121  Q
    |||||||| ||| |||||||||| ||||||| ||||||||||| |||||||| ||||| ||||||||||||| || ||||||||| ||||| ||||||||    
T  18427069 tctatgaaacacggacactcctcagattaggtgtgtcccggtgccggacacgtgtcgtatccgacaccgacatatataattacaccgaattatgtgattt 18426970  T
Q  122 tt 123  Q
    ||    
T  18426969 tt 18426968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 25 - 190
Target Start/End: Original strand, 24204983 - 24205156
Alignment:
Q  25 atgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtc-gtgtccgacaccgacacatgtaattacactgaattttgtgattttt 123  Q
    ||||||||| ||||||||||| ||||||||||||| ||||||||||||||||| |||||||||| |||||| | ||||||||||| ||| ||| |||||     
T  24204983 atgaagcacggacactcctcgaattaggcgtgtcctggtgtcggacacgcgtcagtgtccgaca-cgacacttataattacactgtattatgtcattttc 24205081  T
Q  124 acaaattct--------ttgctgtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
     |||||| |        | |  ||||||||||||||||||| |||||||| |||||| || ||||||||||||||    
T  24205082 tcaaattattatccgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgtctgtgtccgtgcttcatag 24205156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 82 - 190
Target Start/End: Complemental strand, 21479178 - 21479068
Alignment:
Q  82 ccgacaccgacacatgtaattacactgaattttgtgatttttacaaattctttgctgtgtc--agtgtccgtgtcgtatccggtgttcgtgtccgtatcc 179  Q
    |||||||||||||  |||||||||||||||| |||||||||| |||||| || ||||||||   ||||| ||||||| |||||||| |||||||||||||    
T  21479178 ccgacaccgacactagtaattacactgaattgtgtgattttttcaaattattagctgtgtcggcgtgtcagtgtcgtgtccggtgtccgtgtccgtatcc 21479079  T
Q  180 gtgcttcatag 190  Q
     ||||||||||    
T  21479078 atgcttcatag 21479068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 25 - 142
Target Start/End: Original strand, 4987222 - 4987350
Alignment:
Q  25 atgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccg-----------acacatgtaattacactgaattt 113  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||           |||| |||||||||||||||||     
T  4987222 atgaagtacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacacgtcaccaacacttgtaattacactgaatta 4987321  T
Q  114 tgtgatttttacaaattctttgctgtgtc 142  Q
    |||||||||| |||||| || ||||||||    
T  4987322 tgtgattttttcaaattattagctgtgtc 4987350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 3631796 - 3631708
Alignment:
Q  30 gcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtga 118  Q
    |||| ||||||||||||| ||||||||||| ||||||||||| | |||||||||||||| | ||||| ||||||||||||||| |||||    
T  3631796 gcacggacactcctcggactaggcgtgtcctggtgtcggacatgtgtcgtgtccgacactggcacatataattacactgaattatgtga 3631708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 26492145 - 26492252
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||| | |||| |||||||||||| ||||||  |||||| |||| | ||||||||||||||||| || ||||||||||||||||| | |||||||    
T  26492145 ctatgaagcgcggacattcctcggattagacgtgtcttggtgtcagacatgtgtcgtgtccgacaccgatacttgtaattacactgaattgtatgatttt 26492244  T
Q  123 tacaaatt 130  Q
    | ||||||    
T  26492245 ttcaaatt 26492252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 41961579 - 41961650
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    ||||||||||| |||||| ||||||||||||||||||| |||||||||||| ||||||||||| ||||||||    
T  41961579 ctatgaagcacggacacttctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacac 41961650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 23 - 123
Target Start/End: Original strand, 34185052 - 34185163
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtc-----------cgacaccgacacatgtaattacactgaat 111  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||  ||| ||||           |||||||||||| ||||||||||||||||    
T  34185052 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacatgtcttgtccgacatggacacgacaccgacacttgtaattacactgaat 34185151  T
Q  112 tttgtgattttt 123  Q
    | ||||||||||    
T  34185152 tgtgtgattttt 34185163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 91 - 190
Target Start/End: Original strand, 11313808 - 11313907
Alignment:
Q  91 acacatgtaattacactgaattttgtgatttttacaaattctttgctgtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    |||||| |||||||||| |||| |||||||||  |||||| || || ||||| ||||| || |||| ||| |||||||||||||||||||||||||||||    
T  11313808 acacatataattacactaaattatgtgattttctcaaattattagcagtgtcggtgtctgtttcgtctcccgtgttcgtgtccgtatccgtgcttcatag 11313907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 149
Target Start/End: Complemental strand, 1509641 - 1509532
Alignment:
Q  35 gacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttttacaaattcttt 134  Q
    |||||||||| |||||||||||| ||||||||||||||    ||   | ||||||||||| |||||||||||| |||| |||||||||| |||||| ||     
T  1509641 gacactcctccgattaggcgtgtaccggtgtcggacac----cgaaac-gacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 1509547  T
Q  135 gctgtgtcagtgtcc 149  Q
    |||||||||||||||    
T  1509546 gctgtgtcagtgtcc 1509532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 24 - 144
Target Start/End: Original strand, 24633343 - 24633462
Alignment:
Q  24 tatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgattttt 123  Q
    |||||||||| | ||||| ||| ||||||||||| |||||||  |||| | ||||||||| |||||||||||| |||||||| ||||||  |||||||||    
T  24633343 tatgaagcacgggcactc-tcgaattaggcgtgtaccggtgttagacaagtgtcgtgtccaacaccgacacatataattacattgaattacgtgattttt 24633441  T
Q  124 acaaattctttgctgtgtcag 144  Q
     |||||| ||  |||||||||    
T  24633442 ccaaattattaactgtgtcag 24633462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 130
Target Start/End: Complemental strand, 29508567 - 29508456
Alignment:
Q  25 atgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacac------cgacacatgtaattacactgaattttgtga 118  Q
    ||||||||| |||||| || ||||||| ||||||||||||||||||  | ||||||||||||||      |||||||| ||||||||||||||| | |||    
T  29508567 atgaagcacggacacttcttggattagacgtgtcccggtgtcggacgtgtgtcgtgtccgacaccaacatcgacacatataattacactgaattatatga 29508468  T
Q  119 tttttacaaatt 130  Q
    ||||| ||||||    
T  29508467 ttttttcaaatt 29508456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 52369906 - 52369834
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtc-gtgtccgacaccgacac 94  Q
    ||||||||||| ||||||||||||| |||| |||||||||||| ||||||||||| |||||||| ||||||||    
T  52369906 ctatgaagcacggacactcctcggaataggtgtgtcccggtgttggacacgcgtcggtgtccgataccgacac 52369834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 63 - 122
Target Start/End: Complemental strand, 2941637 - 2941578
Alignment:
Q  63 tgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||| |||||| |||||||||||||||||||||| ||||||||||| |||||||||||||    
T  2941637 tgtcagacacgtgtcgtgtccgacaccgacacatataattacactgtattttgtgatttt 2941578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 23 - 190
Target Start/End: Original strand, 3163971 - 3164140
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||||  ||||||||||| |||||||||||| ||||||||||||||         ||||| | |||| |||  |||||||||||| |||||||||    
T  3163971 ctatgaagcatggacactcctcgaattaggcgtgtctcggtgtcggacacg------acacgacatcaacacttgttcttacactgaattatgtgatttt 3164064  T
Q  123 tacaaattctttgctgtgt--------cagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    | |||||| || |||||||        || |||||||||||| |||||||| |||||| |||||||||||||||||    
T  3164065 ttcaaattattagctgtgtcgacgtgccattgtccgtgtcgtgtccggtgtccgtgtctgtatccgtgcttcatag 3164140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 24 - 187
Target Start/End: Original strand, 7614357 - 7614519
Alignment:
Q  24 tatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgattttt 123  Q
    |||||||||| |||| || || |||||||||||||  | |||| ||| || | ||||| ||||||||||| || |||||| |||||||| |||||||||     
T  7614357 tatgaagcacagacattcttcagattaggcgtgtcttgatgtcagac-cgtgccgtgttcgacaccgacatatataattatactgaattatgtgattttc 7614455  T
Q  124 acaaattctttgctgtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttca 187  Q
      ||||| ||  ||||||| ||||| |||||||||| | | || ||||||||||||||| ||||    
T  7614456 ttaaattattaactgtgtcggtgtctgtgtcgtatctgatatttgtgtccgtatccgtgtttca 7614519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 7928515 - 7928444
Alignment:
Q  77 cgtgtccgacaccgacacatgtaattacactgaattttgtgatttttacaaattctttgctgtgtcagtgtc 148  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||| |||||| || || ||||| |||||    
T  7928515 cgtgtccgacaccgacacatataattacactgaattatgtgattttttcaaattattagcggtgtcggtgtc 7928444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 73
Target Start/End: Complemental strand, 40052431 - 40052381
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacg 73  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  40052431 ctatgaagcacgaacactcctcggattaggcgtgtcccggtgtcggacacg 40052381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 49651716 - 49651833
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtc----------cgacaccgacacatgtaattacactgaatt 112  Q
    ||||||||||| |||||| ||||||||||| |||||||||||||||| | | ||||||||          |||||||||||| |||||||||| ||||||    
T  49651716 ctatgaagcacggacacttctcggattaggtgtgtcccggtgtcggatatgtgtcgtgtccggtccgacacgacaccgacacttgtaattacagtgaatt 49651815  T
Q  113 ttgtgatttttacaaatt 130  Q
     |||||||||| ||||||    
T  49651816 atgtgattttttcaaatt 49651833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 122
Target Start/End: Complemental strand, 8842450 - 8842349
Alignment:
Q  21 atctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatt 120  Q
    ||||||||||||| |||||||||||||||||||||||| |  | ||  ||| | |||||||| |||||||||| || |||||||||  |||| |||||||    
T  8842450 atctatgaagcacggacactcctcggattaggcgtgtctcaatatctaacatgtgtcgtgtctgacaccgacatatataattacaccaaattatgtgatt 8842351  T
Q  121 tt 122  Q
    ||    
T  8842350 tt 8842349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 25074914 - 25074841
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcg-tcgtgtccgacaccgacaca 95  Q
    |||||||||||  ||||||||||||||||| ||||||| |||||||||||||| | ||||| ||||||||||||    
T  25074914 ctatgaagcacgaacactcctcggattaggtgtgtcccagtgtcggacacgcgttggtgtcagacaccgacaca 25074841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 10335349 - 10335401
Alignment:
Q  138 gtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    ||||||||||||||||||| |||||||| ||||| ||||||||||||||||||    
T  10335349 gtgtcagtgtccgtgtcgtgtccggtgtccgtgttcgtatccgtgcttcatag 10335401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 11610630 - 11610578
Alignment:
Q  21 atctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacg 73  Q
    ||||||||||||| |||||||||| |||||||||||||||| |||||||||||    
T  11610630 atctatgaagcacggacactcctcagattaggcgtgtcccgatgtcggacacg 11610578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 88
Target Start/End: Complemental strand, 14217021 - 14216957
Alignment:
Q  24 tatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacac 88  Q
    |||||||||| |||||| ||||||||||| ||||||| |||||| ||||| ||||||||||||||    
T  14217021 tatgaagcacggacacttctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgtccgacac 14216957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 88
Target Start/End: Complemental strand, 14223150 - 14223086
Alignment:
Q  24 tatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacac 88  Q
    |||||||||| |||||| ||||||||||| ||||||| |||||| ||||| ||||||||||||||    
T  14223150 tatgaagcacggacacttctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgtccgacac 14223086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 21211413 - 21211341
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtc-gtgtccgacaccgacac 94  Q
    |||||||||||  ||||||||||||||||| ||||||| |||||||||||||||| |||||  ||||||||||    
T  21211413 ctatgaagcacaaacactcctcggattaggagtgtcccagtgtcggacacgcgtcggtgtcgaacaccgacac 21211341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 25093582 - 25093522
Alignment:
Q  62 gtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||||| | || ||||||||||||||||||| ||||||||||||||| |||||||||    
T  25093582 gtgtcggacatgtgttgtgtccgacaccgacacatataattacactgaattgtgtgatttt 25093522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 190
Target Start/End: Original strand, 35994733 - 35994852
Alignment:
Q  77 cgtgtccgacaccgacacatgtaattacactgaattttgtgatttttacaaattctttgctg--------tgtcagtgtccgtgtcgtatccggtgttcg 168  Q
    |||||||||||| ||||| ||||||||||||||||| |||||||||| |||||| || ||||        ||||| ||||| |||||| |||||||| |     
T  35994733 cgtgtccgacac-gacacttgtaattacactgaattatgtgattttt-caaattattagctgtgtcggcttgtcattgtccatgtcgtgtccggtgtcca 35994830  T
Q  169 tgtccgtatccgtgcttcatag 190  Q
    ||||||||||||||||||||||    
T  35994831 tgtccgtatccgtgcttcatag 35994852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 154
Target Start/End: Complemental strand, 45451641 - 45451541
Alignment:
Q  54 gtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttttacaaattctttgctgtgtcagtgtccgtgt 153  Q
    ||||| |||||||||||| | |||||||||||||||||||||| | |||| |||||| | |||||||||  |||||| || || ||||  ||||||||||    
T  45451641 gtgtctcggtgtcggacatgtgtcgtgtccgacaccgacacatattattatactgaagtatgtgattttctcaaattattagcagtgttcgtgtccgtgt 45451542  T
Q  154 c 154  Q
    |    
T  45451541 c 45451541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 143 - 190
Target Start/End: Original strand, 750687 - 750734
Alignment:
Q  143 agtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||||    
T  750687 agtgtccgtgtcgtgtccggtgtccgtgtccgtatccgtgcttcatag 750734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 8039764 - 8039835
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    ||||||||||| || |||| |||||||| |||||||||||||||||||| |  || ||||||||||||||||    
T  8039764 ctatgaagcacagatactcttcggattaagcgtgtcccggtgtcggacatgtctcatgtccgacaccgacac 8039835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 14209243 - 14209172
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    ||||||||||| |||||| || |||||||| || ||||| ||||| ||||| ||||||||||||||||||||    
T  14209243 ctatgaagcacggacacttcttggattaggtgtatcccgatgtcgtacacgtgtcgtgtccgacaccgacac 14209172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 83 - 190
Target Start/End: Complemental strand, 14747621 - 14747511
Alignment:
Q  83 cgacaccgacacatgtaattacactgaattttgtgattttta-caaattctttgctgtgtcag--tgtccgtgtcgtatccggtgttcgtgtccgtatcc 179  Q
    |||||| ||| | |||||||||||| |||| ||||||||||  |||||| || |||||||| |  |||| ||||||| |||||||| ||| |||||||||    
T  14747621 cgacacggacccttgtaattacactaaattatgtgatttttttcaaattattagctgtgtcggcgtgtcagtgtcgtgtccggtgtccgtatccgtatcc 14747522  T
Q  180 gtgcttcatag 190  Q
    |||||||||||    
T  14747521 gtgcttcatag 14747511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 47 - 94
Target Start/End: Complemental strand, 14832205 - 14832158
Alignment:
Q  47 attaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  14832205 attaggcgtgtcccggtgtcggacacgtgtcgtgtccgataccgacac 14832158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 190
Target Start/End: Original strand, 15796223 - 15796409
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacaca-----------tgtaattacactgaat 111  Q
    |||||||||||  |||||| | ||||||||||||| ||||||| ||||||| || |||||||||||| ||||            ||||||||||||||||    
T  15796223 ctatgaagcacgaacactctttggattaggcgtgttccggtgttggacacgtgttgtgtccgacacctacacgacaccgacaattgtaattacactgaat 15796322  T
Q  112 tttgtgatttttacaaattctttgctgtgtcag--------tgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    | | |||||||| |||||| ||  ||||||| |        |||||||||||| |||||||| ||||||| ||||||||||||||||    
T  15796323 tatatgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtgtccatatccgtgcttcatag 15796409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 190
Target Start/End: Complemental strand, 15864950 - 15864789
Alignment:
Q  24 tatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtc-gtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||||| ||||||| | |||||||||||||||| ||||| |||||| ||| |||||||||| |||||| | | |||||||| |||| | | |||||    
T  15864950 tatgaagcacggacactctttggattaggcgtgtccc-gtgtcagacacgtgtcggtgtccgaca-cgacacctatgattacactaaattatatcatttt 15864853  T
Q  123 tacaaattctttgctgtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    | |||||| ||  | ||||| |    |||||||| |||||||| |||||| || ||||||||||||||    
T  15864852 ttcaaattattatccgtgtcgg----cgtgtcgtgtccggtgtccgtgtctgtgtccgtgcttcatag 15864789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 26508166 - 26508108
Alignment:
Q  86 caccgacacatgtaattacactgaattttgtgatttttacaaattctttgctgtgtcag 144  Q
    ||||||||| ||||||||||||||||| |||||||||| |||||| || ||||||||||    
T  26508166 caccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcag 26508108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 198
Target Start/End: Original strand, 34307737 - 34307903
Alignment:
Q  45 ggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacaca-----tgtaattacactgaattttgtgatttttacaaattctttgctgt 139  Q
    |||||||||||||| | || ||| | ||| ||||||||||||||||||||      | ||||||||||||| | |||||||||  |||||| || || ||    
T  34307737 ggattaggcgtgtctcagtatcgaagacgtgtcgtgtccgacaccgacacgacacttataattacactgaaatatgtgattttctcaaattattagcggt 34307836  T
Q  140 gtcag--------tgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatagctatctat 198  Q
    |||||        |||| ||||| | |||||||||||||||||||||| |||||||||||| |||||    
T  34307837 gtcagcgtgttcgtgtctgtgtcatgtccggtgttcgtgtccgtatccatgcttcatagctctctat 34307903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 10318103 - 10318155
Alignment:
Q  138 gtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    ||||| ||||||||||||| |||||||| ||||| ||||||||||||||||||    
T  10318103 gtgtccgtgtccgtgtcgtgtccggtgtccgtgttcgtatccgtgcttcatag 10318155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 122
Target Start/End: Original strand, 4466540 - 4466639
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||||| ||||||||||| || || |||||||| |||||||||||   | || |||||||||| ||||| ||  ||||||||||| | |||||||    
T  4466540 ctatgaagcacggacactcctcgaataagccgtgtcccagtgtcggacacatcttgtatccgacaccggcacatatagctacactgaattatatgatttt 4466639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 130
Target Start/End: Original strand, 8587017 - 8587068
Alignment:
Q  79 tgtccgacaccgacacatgtaattacactgaattttgtgatttttacaaatt 130  Q
    |||||||||||||||| |||||||||||| |||| |||||||||| ||||||    
T  8587017 tgtccgacaccgacacttgtaattacacttaattatgtgattttttcaaatt 8587068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 112
Target Start/End: Complemental strand, 12100385 - 12100299
Alignment:
Q  26 tgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcg-tcgtgtccgacaccgacacatgtaattacactgaatt 112  Q
    |||||||| | ||||||||||| |||| |||||||||||||||||||||| | ||||| |||| |||||| | | |||||||||||||    
T  12100385 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacacgcgttagtgtcagaca-cgacacctattattacactgaatt 12100299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 14979268 - 14979225
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtc 66  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  14979268 ctatgaagcacggacactcctcgggttaggcgtgtcccggtgtc 14979225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 25065037 - 25064966
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    ||||| |||||  ||||||||||||| |  |||||||||||||| |||||| ||||||||||||||| ||||    
T  25065037 ctatggagcacgaacactcctcggataaaccgtgtcccggtgtcagacacgtgtcgtgtccgacaccaacac 25064966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 28812645 - 28812574
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    |||||| |||| ||||||||||||||||||||||||| | ||||||||| |  ||||||| |||||| ||||    
T  28812645 ctatgaggcacagacactcctcggattaggcgtgtcctgctgtcggacatgtatcgtgtctgacaccaacac 28812574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 34910435 - 34910393
Alignment:
Q  24 tatgaagcactgacactcctcggattaggcgtgtcccggtgtc 66  Q
    |||||||||| ||||||||||||||||| ||||||||||||||    
T  34910435 tatgaagcacggacactcctcggattagacgtgtcccggtgtc 34910393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 2408590 - 2408663
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtc-gtgtccgacaccgacaca 95  Q
    ||||||||||| || ||||||  |||||||||||||||||||||| |||||| || ||||| ||| ||||||||    
T  2408590 ctatgaagcacggagactccttagattaggcgtgtcccggtgtcgaacacgcatcagtgtctgactccgacaca 2408663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 112
Target Start/End: Complemental strand, 23657858 - 23657769
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaatt 112  Q
    |||||||| || ||||||  |||||||||| |||||||||| |||||||   ||| ||||||||||||| |  | |||||||||||||||    
T  23657858 ctatgaagtacggacacttttcggattaggtgtgtcccggtatcggacaaatgtcatgtccgacaccgatatttataattacactgaatt 23657769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 95
Target Start/End: Original strand, 25651969 - 25652038
Alignment:
Q  27 gaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtc-gtgtccgacaccgacaca 95  Q
    ||||||||||||||| |||||||||| ||||| |||||||| ||||| ||| |||||| |||| ||||||    
T  25651969 gaagcactgacactcttcggattaggtgtgtctcggtgtcgaacacgtgtcggtgtccaacactgacaca 25652038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 27903757 - 27903684
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtc-gtgtccgacaccgacaca 95  Q
    ||||||||||| |||||| |||||||||||| ||  || ||||| |||||||||| || |||||||||||||||    
T  27903757 ctatgaagcacggacacttctcggattaggcatgatccagtgtcagacacgcgtcggtatccgacaccgacaca 27903684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 32804485 - 32804579
Alignment:
Q  24 tatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||||| |||||||||| |||||||||| |  | ||| |||||| | |||||||||||    ||||||| |||||||||| |||| |||||||||    
T  32804485 tatgaagcacggacactcctcagattaggcgtttttcagtggcggacatgtgtcgtgtccga----gacacatataattacactaaattatgtgatttt 32804579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 1389956 - 1389908
Alignment:
Q  24 tatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacac 72  Q
    |||||||||| ||||||||| ||||||||| ||||| ||||||||||||    
T  1389956 tatgaagcacggacactccttggattaggcatgtcctggtgtcggacac 1389908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 1509681 - 1509637
Alignment:
Q  28 aagcactgacactcctcggattaggcgtgtcccggtgtcggacac 72  Q
    |||||| |||||||||| |||||||||||| ||||||||||||||    
T  1509681 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac 1509637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 123
Target Start/End: Complemental strand, 3865749 - 3865693
Alignment:
Q  67 ggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgattttt 123  Q
    ||||||| |||||||| ||||||||||| |||||||| |||||||| ||||| ||||    
T  3865749 ggacacgtgtcgtgtcagacaccgacacttgtaattatactgaattatgtgagtttt 3865693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 4990912 - 4990948
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcc 59  Q
    ||||||||||| |||||||||||||||||||||||||    
T  4990912 ctatgaagcacggacactcctcggattaggcgtgtcc 4990948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 123
Target Start/End: Complemental strand, 8593200 - 8593156
Alignment:
Q  79 tgtccgacaccgacacatgtaattacactgaattttgtgattttt 123  Q
    |||||||||||||||| |||||||| |||||||| ||||||||||    
T  8593200 tgtccgacaccgacacttgtaattatactgaattatgtgattttt 8593156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 191
Target Start/End: Original strand, 32400702 - 32400810
Alignment:
Q  77 cgtgtccgacaccgacacatgtaattacactgaattttgtgatttttacaaattctttgctgtgtcagtgtccgtgtc-gtatccggtgttcgtgtccgt 175  Q
    |||||||||||| ||||| ||||||||||   |||| ||| || ||| |||||| || ||||||||     ||||||| || ||||||||||||||||||    
T  32400702 cgtgtccgacacggacacttgtaattaca---aattatgtaatcttttcaaattattagctgtgtcg----ccgtgtcagtgtccggtgttcgtgtccgt 32400794  T
Q  176 atccgtgcttcatagc 191  Q
    |||| |||||||||||    
T  32400795 atccatgcttcatagc 32400810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 55213092 - 55213020
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacaca 95  Q
    ||||| ||||| || ||| || |||||| ||||||| |||||||||||||| || ||| ||||||||||||||    
T  55213092 ctatgtagcacggatacttcttggattatgcgtgtctcggtgtcggacacgtgttgtgcccgacaccgacaca 55213020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 64
Target Start/End: Original strand, 3730106 - 3730149
Alignment:
Q  21 atctatgaagcactgacactcctcggattaggcgtgtcccggtg 64  Q
    ||||||||||||  |||||||||||||||||| |||||||||||    
T  3730106 atctatgaagcatggacactcctcggattaggtgtgtcccggtg 3730149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 190
Target Start/End: Original strand, 10268481 - 10268601
Alignment:
Q  78 gtgtccgacaccgacacatgtaattacactgaattttgtgatttttacaaattctttgct--------gtgtcagtgtccgtgtcgtatccggtgttcgt 169  Q
    ||||| ||||| ||||| |||||||||||| |||| |||||||||| |||||| ||  ||        |||||||||||| |||||||  || ||| |||    
T  10268481 gtgtctgacactgacacttgtaattacactaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccatgtcgtaatcgatgtccgt 10268580  T
Q  170 gtccgtatccgtgcttcatag 190  Q
    || ||||||||||||||||||    
T  10268581 gttcgtatccgtgcttcatag 10268601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 130
Target Start/End: Complemental strand, 34910376 - 34910329
Alignment:
Q  83 cgacaccgacacatgtaattacactgaattttgtgatttttacaaatt 130  Q
    |||||||||| | ||||||||||||||||| |||||||||| ||||||    
T  34910376 cgacaccgactcttgtaattacactgaattatgtgattttttcaaatt 34910329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 5440967 - 5441033
Alignment:
Q  23 ctatgaagcactgacactcctcggattagg-cgtgtcccggtgtcggacacgcgtcgtgtccgacac 88  Q
    ||||||||||| ||||||||||| |||||| |||||| |||||| ||||| | |||||||| |||||    
T  5440967 ctatgaagcacggacactcctcgaattaggccgtgtctcggtgttggacatgtgtcgtgtctgacac 5441033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 94
Target Start/End: Original strand, 12704597 - 12704663
Alignment:
Q  29 agcactgacactcctcggattaggcgtgtcccggtgtcggacacgcg-tcgtgtccgacaccgacac 94  Q
    ||||| ||||||||| ||||||| ||||| | ||||||||||| ||| | |||||||||||||||||    
T  12704597 agcacggacactcctaggattagacgtgttctggtgtcggacatgcgttggtgtccgacaccgacac 12704663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 14223786 - 14223859
Alignment:
Q  21 atctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtc-gtgtccgacaccgacac 94  Q
    |||||| |||||| || ||||||| |||||||||||||||  ||||||||||| ||| ||||| |||||||||||    
T  14223786 atctataaagcacagaaactcctcagattaggcgtgtccc-atgtcggacacgtgtcggtgtcggacaccgacac 14223859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 128
Target Start/End: Original strand, 14338454 - 14338528
Alignment:
Q  54 gtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttttacaaa 128  Q
    ||||||||||||| || ||| |||||||| ||||||||||  ||| |||||| |||||| ||| |||||| ||||    
T  14338454 gtgtcccggtgtccgatacgtgtcgtgtctgacaccgacatttgtgattacattgaattatgtcattttttcaaa 14338528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 14829822 - 14829776
Alignment:
Q  21 atctatgaagcactgacactcctcggattaggcgtgtcccggtgtcg 67  Q
    ||||| ||||||| |||| ||||| ||||||||||||||||||||||    
T  14829822 atctacgaagcacggacattcctcagattaggcgtgtcccggtgtcg 14829776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 73
Target Start/End: Complemental strand, 17276846 - 17276796
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacg 73  Q
    ||||||||||| |||||| ||||||||||| | ||| ||||||||||||||    
T  17276846 ctatgaagcacggacacttctcggattaggtgcgtctcggtgtcggacacg 17276796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 123
Target Start/End: Original strand, 30184108 - 30184146
Alignment:
Q  85 acaccgacacatgtaattacactgaattttgtgattttt 123  Q
    |||||||||||||||||||||||||||| ||| ||||||    
T  30184108 acaccgacacatgtaattacactgaattatgtcattttt 30184146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 8039337 - 8039284
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgt 76  Q
    ||||||||||   |||||||| |||||||| ||||||||| |||||||||||||    
T  8039337 ctatgaagcataaacactccttggattaggtgtgtcccggagtcggacacgcgt 8039284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 122
Target Start/End: Complemental strand, 8383322 - 8383277
Alignment:
Q  77 cgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||||||||||||| | ||||||||||||||| | |||||||    
T  8383322 cgtgtccgacaccgacacttataattacactgaattatatgatttt 8383277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 9800173 - 9800120
Alignment:
Q  20 gatctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacg 73  Q
    |||||||||||||| || || |||| |||||||||||||| |||||| ||||||    
T  9800173 gatctatgaagcacggaaacgcctccgattaggcgtgtccaggtgtccgacacg 9800120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 122
Target Start/End: Original strand, 11507469 - 11507514
Alignment:
Q  77 cgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||| ||||| |||| ||||||||||||||| |||||||||    
T  11507469 cgtgtccgataccgaaacatataattacactgaattatgtgatttt 11507514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 13806363 - 13806295
Alignment:
Q  25 atgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    ||||||||| ||||||| |||||||||||||||||||| ||||| || | || |||||  ||||||||||    
T  13806363 atgaagcacggacactc-tcggattaggcgtgtcccggggtcggtcatgtgttgtgtctaacaccgacac 13806295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 16789143 - 16789071
Alignment:
Q  21 atctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    ||||||||||||| ||||||||||  |||||| ||||||| |||| ||||| | ||| |||||||||| |||||    
T  16789143 atctatgaagcacggacactcctcaaattaggtgtgtccc-gtgttggacatgtgtcatgtccgacactgacac 16789071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 72
Target Start/End: Complemental strand, 21720879 - 21720842
Alignment:
Q  35 gacactcctcggattaggcgtgtcccggtgtcggacac 72  Q
    ||||||| ||||||||| ||||||||||||||||||||    
T  21720879 gacactcatcggattagacgtgtcccggtgtcggacac 21720842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 59
Target Start/End: Complemental strand, 21861695 - 21861658
Alignment:
Q  22 tctatgaagcactgacactcctcggattaggcgtgtcc 59  Q
    |||||||||||| |||||||||||||||||| ||||||    
T  21861695 tctatgaagcacggacactcctcggattaggtgtgtcc 21861658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 123
Target Start/End: Complemental strand, 38731278 - 38731237
Alignment:
Q  82 ccgacaccgacacatgtaattacactgaattttgtgattttt 123  Q
    ||||||||||||||| ||| ||||||||||| ||||||||||    
T  38731278 ccgacaccgacacatataactacactgaattatgtgattttt 38731237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 122
Target Start/End: Original strand, 49505148 - 49505193
Alignment:
Q  77 cgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||||||| ||||||| |||||||||| |||| |||||||||    
T  49505148 cgtgtccgacactgacacatataattacactaaattatgtgatttt 49505193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 4991030 - 4991082
Alignment:
Q  138 gtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    |||||||| |||||||||| | |||||| ||||||||||| |||| |||||||    
T  4991030 gtgtcagtctccgtgtcgtgttcggtgtccgtgtccgtatacgtgtttcatag 4991082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 8903554 - 8903514
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggt 63  Q
    |||||||||||  ||||||||||||||||| ||||||||||    
T  8903554 ctatgaagcacgaacactcctcggattaggtgtgtcccggt 8903514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 88
Target Start/End: Original strand, 10690193 - 10690257
Alignment:
Q  24 tatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacac 88  Q
    ||||||||||  ||| ||||||||||||| ||||| | ||||| |||||| || |||||||||||    
T  10690193 tatgaagcacatacattcctcggattaggtgtgtcgccgtgtcagacacgtgttgtgtccgacac 10690257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 122
Target Start/End: Complemental strand, 13414533 - 13414489
Alignment:
Q  78 gtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    ||||||||||||||||||| |||||||| |||||| | |||||||    
T  13414533 gtgtccgacaccgacacatataattacattgaattatttgatttt 13414489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 17005548 - 17005620
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacaca 95  Q
    |||||||||||  ||||||||||||||||  |||||| |||||| |||||| ||  |||| |||||| |||||    
T  17005548 ctatgaagcacaaacactcctcggattagaggtgtcctggtgtcagacacgtgttatgtctgacaccaacaca 17005620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 21 - 123
Target Start/End: Original strand, 4819 - 4923
Alignment:
Q  21 atctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtcc--gacaccgacacatgtaattacactgaattttgtga 118  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||| | ||||||| |  |||||| |||| ||||||||||||||||| |||||    
T  4819 atctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgtacaagacaccaacacttgtaattacactgaattatgtga 4918  T
Q  119 ttttt 123  Q
    |||||    
T  4919 ttttt 4923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 26 - 130
Target Start/End: Complemental strand, 70394 - 70290
Alignment:
Q  26 tgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttttac 125  Q
    ||||||||  |||||| ||||||||||| ||||| ||||||||||||| |||||||||||||||||||| | ||||||||||||||| ||| |||||| |    
T  70394 tgaagcacgaacactcatcggattaggcatgtcctggtgtcggacacgtgtcgtgtccgacaccgacacttataattacactgaattatgttattttttc 70295  T
Q  126 aaatt 130  Q
    |||||    
T  70294 aaatt 70290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 130
Target Start/End: Complemental strand, 14647 - 14542
Alignment:
Q  22 tctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgattt 121  Q
    ||||||||||||  ||||||||  ||||||||||||| |||||||||||||| ||||||||||||||   ||| ||||||||||||||||| ||||||||    
T  14647 tctatgaagcacgtacactccttcgattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacac---cacttgtaattacactgaattatgtgattt 14551  T
Q  122 ttacaaatt 130  Q
    || ||||||    
T  14550 tttcaaatt 14542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 58; Significance: 1e-24; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 241726 - 241653
Alignment:
Q  21 atctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  241726 atctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccaacac 241653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 236914 - 236965
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgc 74  Q
    ||||||||||| |||||||||| ||||||| ||||||||||||| |||||||    
T  236914 ctatgaagcacagacactcctcagattaggtgtgtcccggtgtcagacacgc 236965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 71855 - 71784
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||    
T  71855 ctatgaagcaccgacactcctcggattagtcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacac 71784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 23 - 105
Target Start/End: Original strand, 4976 - 5058
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattaca 105  Q
    ||||||||||| ||||||||||||||||||| |||| |  ||||||||||| |||||||||||||||||||| ||||||||||    
T  4976 ctatgaagcacagacactcctcggattaggcatgtctcaatgtcggacacgtgtcgtgtccgacaccgacacttgtaattaca 5058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 23 - 114
Target Start/End: Complemental strand, 3427 - 3336
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaatttt 114  Q
    ||||||||||| |||||||||||||||||||||||||| |||||   |||| ||| |||||||||| ||||| |||||||||||| ||||||    
T  3427 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtccaccacgtgtcttgtccgacactgacacttgtaattacacttaatttt 3336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 188
Target Start/End: Complemental strand, 3312 - 3262
Alignment:
Q  138 gtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcat 188  Q
    |||||||| |||||||||| |||||||| ||||||  ||||||||||||||    
T  3312 gtgtcagtatccgtgtcgtgtccggtgtccgtgtctatatccgtgcttcat 3262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 21 - 112
Target Start/End: Original strand, 45468 - 45559
Alignment:
Q  21 atctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaatt 112  Q
    |||||||||||||  ||| || | ||||||||| |||| ||||||| |||||| |||||||||||||||||||| |||||||||||||||||    
T  45468 atctatgaagcacgtacaatctttggattaggcatgtcgcggtgtcagacacgtgtcgtgtccgacaccgacacttgtaattacactgaatt 45559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 8562 - 8635
Alignment:
Q  21 atctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    ||||||||||||| ||||||||||| ||||||||||| || ||||||||||||  |||||||||| ||||||||    
T  8562 atctatgaagcacggacactcctcgaattaggcgtgtaccagtgtcggacacgtatcgtgtccgataccgacac 8635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 46; Significance: 2e-17; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 92940 - 92875
Alignment:
Q  24 tatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacacc 89  Q
    |||||||||| ||||||||||||||||||||||||| |||||| |||| | |||||||||||||||    
T  92940 tatgaagcacggacactcctcggattaggcgtgtccaggtgtccgacatgtgtcgtgtccgacacc 92875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 179
Target Start/End: Complemental strand, 83219 - 83122
Alignment:
Q  83 cgacaccgacacatgtaattacactgaattttgtgatttttacaaattct-ttgctgtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatcc 179  Q
    |||||||||||  ||||||||||||||||| ||| ||||||  ||||| | |||  |||||||||||||||||   ||| |||| |||||||||||||    
T  83219 cgacaccgacatttgtaattacactgaattatgtcatttttttaaattgtgttgacgtgtcagtgtccgtgtctagtccagtgtccgtgtccgtatcc 83122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 120
Target Start/End: Complemental strand, 123686 - 123650
Alignment:
Q  84 gacaccgacacatgtaattacactgaattttgtgatt 120  Q
    ||||||||||| ||||||||||||||||| |||||||    
T  123686 gacaccgacacttgtaattacactgaattatgtgatt 123650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 3778 - 3849
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    ||||||||||  |||||||||||||||||||||||| || ||||||||| | ||||||||||||||| ||||    
T  3778 ctatgaagcaaggacactcctcggattaggcgtgtctcgatgtcggacatgtgtcgtgtccgacaccaacac 3849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 3058 - 2987
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    ||||| ||||| ||||||||||||||||||||||| ||||||||| ||||| |||||||| || ||||||||    
T  3058 ctatggagcacggacactcctcggattaggcgtgttccggtgtcgaacacgtgtcgtgtctgataccgacac 2987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 105
Target Start/End: Complemental strand, 8720 - 8638
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattaca 105  Q
    ||||||||||| ||||||||| ||||||||||| |||| |||||||||||| ||||||| | |||| |||||  |||||||||    
T  8720 ctatgaagcacggacactccttggattaggcgtatcccagtgtcggacacgtgtcgtgttcaacacagacacgagtaattaca 8638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 83 - 190
Target Start/End: Complemental strand, 46741 - 46626
Alignment:
Q  83 cgacaccgacacatgtaattacactgaattttgtgatttttacaaattctttgctgtgtcag--------tgtccgtgtcgtatccggtgttcgtgtccg 174  Q
    |||||||||||  ||||||||||||||||| |||||||||| |||||| ||  ||||||| |        |||||||||||| |||| ||| ||||||||    
T  46741 cgacaccgacatttgtaattacactgaattatgtgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccgatgtccgtgtccg 46642  T
Q  175 tatccgtgcttcatag 190  Q
    ||||||||||||||||    
T  46641 tatccgtgcttcatag 46626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 58
Target Start/End: Complemental strand, 46776 - 46741
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtc 58  Q
    ||||||||||| ||||||||||||||||||||||||    
T  46776 ctatgaagcacggacactcctcggattaggcgtgtc 46741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 142
Target Start/End: Complemental strand, 51941 - 51811
Alignment:
Q  24 tatgaagcactgacactcctcggattaggcgtgtcccggtgt---------cggacacgcgtcgtgtccgacaccgaca---catgtaattacactgaat 111  Q
    |||||||||  |||| ||||||||||||||||||||||||||         ||||||||  ||||||| ||||||||||   | ||||||||||||||||    
T  51941 tatgaagcatggacattcctcggattaggcgtgtcccggtgttggacacgacggacacgtatcgtgtctgacaccgacaacacttgtaattacactgaat 51842  T
Q  112 tttgtgatttttacaaattctttgctgtgtc 142  Q
    | |||||||||| |||||| || ||||||||    
T  51841 tatgtgattttttcaaattattagctgtgtc 51811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 225199 - 225263
Alignment:
Q  25 atgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtc-gtgtccgacac 88  Q
    ||||||||| ||||||||||| ||||||||||||| ||||||| ||||||||| |||||||||||    
T  225199 atgaagcacggacactcctcgaattaggcgtgtcctggtgtcgaacacgcgtcagtgtccgacac 225263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 225331 - 225386
Alignment:
Q  138 gtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatagcta 193  Q
    ||||||||||||||||||| |||||||| |||||| || |||||| ||||||||||    
T  225331 gtgtcagtgtccgtgtcgtgtccggtgtccgtgtctgtgtccgtgtttcatagcta 225386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 13543 - 13472
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    |||||||| || |||||||||||||||||| || ||||| ||||| | ||| ||||||||||||||||||||    
T  13543 ctatgaagtacggacactcctcggattaggtgtatcccgatgtcgtatacgtgtcgtgtccgacaccgacac 13472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 122
Target Start/End: Complemental strand, 90962 - 90863
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||||||  |||||| | |||||||||||||   ||||||||||||| || ||||| |||| ||||| || ||||||||||||||| | |||||||    
T  90962 ctatgaagcacatacactcattggattaggcgtgttttggtgtcggacacgtgttgtgtctgacatcgacatatataattacactgaattatatgatttt 90863  T

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Target: scaffold0021 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 86 - 190
Target Start/End: Complemental strand, 130538 - 130426
Alignment:
Q  86 caccgacacatgtaattacactgaattttgtgatttttacaaattctttgctgtgtcag--------tgtccgtgtcgtatccggtgttcgtgtccgtat 177  Q
    ||||||||| ||||||||||||||||| |||||||||| |||| | ||  ||||||| |        |||||||||||| |||||||| |||||||||||    
T  130538 caccgacacttgtaattacactgaattatgtgattttttcaaactattaactgtgtcggcttgtcattgtccgtgtcgtgtccggtgtccgtgtccgtat 130439  T
Q  178 ccgtgcttcatag 190  Q
    || ||||||||||    
T  130438 ccatgcttcatag 130426  T

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Target: scaffold0306 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 13523 - 13454
Alignment:
Q  25 atgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    ||||||||| ||||||||| |||||||| ||||||  ||||| ||| || ||||||||||||||||||||    
T  13523 atgaagcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacaccgacac 13454  T

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Target: scaffold0152 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 21804 - 21873
Alignment:
Q  25 atgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    ||||||||| ||||||||| |||||||| ||||||  ||||| ||| || ||||||||||||||||||||    
T  21804 atgaagcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacaccgacac 21873  T

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Target: scaffold0009 (Bit Score: 38; Significance: 0.000000000001; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 123
Target Start/End: Original strand, 174492 - 174593
Alignment:
Q  22 tctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgattt 121  Q
    ||||||||| ||  ||| |||| ||||||||||||| ||| ||||||||||  | ||||||| |||||||||  ||||||||| ||||||| ||| ||||    
T  174492 tctatgaagtacgaacattccttggattaggcgtgttccgatgtcggacacatgacgtgtccaacaccgacatttgtaattacgctgaattatgtcattt 174591  T
Q  122 tt 123  Q
    ||    
T  174592 tt 174593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 123
Target Start/End: Original strand, 180005 - 180106
Alignment:
Q  22 tctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgattt 121  Q
    ||||||||| ||  ||| |||| ||||||||||||| ||| ||||||||||  | ||||||| |||||||||  ||||||||| ||||||| ||| ||||    
T  180005 tctatgaagtacgaacattccttggattaggcgtgttccgatgtcggacacatgacgtgtccaacaccgacatttgtaattacgctgaattatgtcattt 180104  T
Q  122 tt 123  Q
    ||    
T  180105 tt 180106  T

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Target: scaffold0009; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 69
Target Start/End: Complemental strand, 188512 - 188473
Alignment:
Q  30 gcactgacactcctcggattaggcgtgtcccggtgtcgga 69  Q
    |||| ||||||||||||||||||||||||| |||||||||    
T  188512 gcacggacactcctcggattaggcgtgtcctggtgtcgga 188473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 263303 - 263372
Alignment:
Q  25 atgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    ||||| ||| ||||||||||||||||||||||||  ||| ||| ||||| |||||||| |||||||||||    
T  263303 atgaaccacggacactcctcggattaggcgtgtcttggtatcgaacacgtgtcgtgtctgacaccgacac 263372  T

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Target: scaffold0008; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 178
Target Start/End: Original strand, 263436 - 263475
Alignment:
Q  139 tgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatc 178  Q
    |||||||||||||||||||||| |||| ||||||||||||    
T  263436 tgtcagtgtccgtgtcgtatccagtgtccgtgtccgtatc 263475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 123
Target Start/End: Complemental strand, 19682 - 19594
Alignment:
Q  40 tcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacaca-----tgtaattacactgaattttgtgattttt 123  Q
    ||||||||||| | ||||  |||||||||||||| ||||||||| ||||||||| |     ||||||||||||||||| ||||||||||    
T  19682 tcctcggattaagtgtgtttcggtgtcggacacgtgtcgtgtccaacaccgacataacacttgtaattacactgaattatgtgattttt 19594  T

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Target: scaffold0128 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 32822 - 32774
Alignment:
Q  24 tatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacac 72  Q
    |||||||||| |||||||||||||||| | |||||||||||||||||||    
T  32822 tatgaagcaccgacactcctcggattatgtgtgtcccggtgtcggacac 32774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 190
Target Start/End: Complemental strand, 9894 - 9842
Alignment:
Q  138 gtgtcagtgtccgtgtcgtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    ||||| |||||| |||||| |||||||| ||||||||||||||||||||||||    
T  9894 gtgtcggtgtccatgtcgtgtccggtgtccgtgtccgtatccgtgcttcatag 9842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 94
Target Start/End: Complemental strand, 53303 - 53239
Alignment:
Q  30 gcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    |||| |||||| || ||||||  ||||||||||||||||||||| ||| ||||||||||||||||    
T  53303 gcacggacacttcttggattaaacgtgtcccggtgtcggacacgtgtcatgtccgacaccgacac 53239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 142
Target Start/End: Original strand, 6992 - 7091
Alignment:
Q  43 tcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttttacaaattctttgctgtgtc 142  Q
    ||||||||||||| ||||| | || || ||| || |||||||||||| |||| |||||||| ||| |||| ||| |||||| |||||| || ||||||||    
T  6992 tcggattaggcgtatcccgatatcagatacgtgttgtgtccgacacctacacttgtaattatactaaattatgtaattttttcaaattattagctgtgtc 7091  T

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Target: scaffold0223 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 142
Target Start/End: Complemental strand, 20231 - 20172
Alignment:
Q  83 cgacaccgacacatgtaattacactgaattttgtgatttttacaaattctttgctgtgtc 142  Q
    |||||| ||||| ||||||||||||||||| |||||||||| |||||| || ||||||||    
T  20231 cgacactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtc 20172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 24155 - 24083
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcgg--acacgcgtcgtgtccgacaccgacac 94  Q
    ||||||||||| ||||||| ||||||||||||||| || |||||||  ||||| || |||||||||||||||||    
T  24155 ctatgaagcacggacactcatcggattaggcgtgt-ccagtgtcggacacacgtgttgtgtccgacaccgacac 24083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 44452 - 44525
Alignment:
Q  21 atctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    ||||||||||||| |||||| ||| |||||  | |||||| |||||||||||| || |||||| ||||||||||    
T  44452 atctatgaagcacagacacttctcagattaaccatgtcccagtgtcggacacgtgttgtgtccaacaccgacac 44525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 144
Target Start/End: Original strand, 44529 - 44586
Alignment:
Q  87 accgacacatgtaattacactgaattttgtgatttttacaaattctttgctgtgtcag 144  Q
    |||||||||| ||||||||||||||| |||||||||  |||||| || || |||||||    
T  44529 accgacacatataattacactgaattatgtgattttctcaaatttttagcggtgtcag 44586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 189
Target Start/End: Complemental strand, 8076 - 7961
Alignment:
Q  75 gtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttttacaaattctttgctgtgtc--agtgtccgtgtcgtatccggtgttcgtgtc 172  Q
    |||||||||||||||||||| | ||||||||||| ||| | |||||||| |||||| || | ||||||   ||||| || |||| |||| |||||||||     
T  8076 gtcgtgtccgacaccgacac-tttaattacactgtattatatgattttttcaaattattagttgtgtcggcgtgtctgtatcgtgtccgatgttcgtgtt 7978  T
Q  173 cgtatccgtgcttcata 189  Q
    ||||||| | |||||||    
T  7977 cgtatccatacttcata 7961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 9678 - 9747
Alignment:
Q  25 atgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacac 94  Q
    ||||||||| ||||||||||||||||  ||||||||| |||| |||| | |||||||| |||||| ||||    
T  9678 atgaagcacggacactcctcggattatacgtgtcccgatgtcagacaagtgtcgtgtctgacaccaacac 9747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 123
Target Start/End: Complemental strand, 23829 - 23789
Alignment:
Q  83 cgacaccgacacatgtaattacactgaattttgtgattttt 123  Q
    |||||||||||| ||||||||||||||||| ||||||||||    
T  23829 cgacaccgacacttgtaattacactgaattatgtgattttt 23789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 144
Target Start/End: Original strand, 17750 - 17810
Alignment:
Q  84 gacaccgacacatgtaattacactgaattttgtgatttttacaaattctttgctgtgtcag 144  Q
    ||||||||||| |||||||||||| |||| |||||||||| |||||| || | ||||||||    
T  17750 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcag 17810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 17540 - 17590
Alignment:
Q  21 atctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggaca 71  Q
    ||||||||||||| || ||||  | ||||||||||||||||||||||||||    
T  17540 atctatgaagcacggaaactcagctgattaggcgtgtcccggtgtcggaca 17590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 122
Target Start/End: Original strand, 5996 - 6035
Alignment:
Q  83 cgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||||||||| ||||||||||| |||||||||||||    
T  5996 cgacaccgacacatataattacactgcattttgtgatttt 6035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 190
Target Start/End: Complemental strand, 63744 - 63709
Alignment:
Q  155 gtatccggtgttcgtgtccgtatccgtgcttcatag 190  Q
    ||||||||||| ||||||||||||||||||||||||    
T  63744 gtatccggtgtccgtgtccgtatccgtgcttcatag 63709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 147
Target Start/End: Original strand, 135263 - 135376
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacatgtaattacactgaattttgtgatttt 122  Q
    |||||||||||  |||| |||| |||||||||||||| |||||||||||||           |||||||||||| ||||||||| ||||| |||||||||    
T  135263 ctatgaagcacgaacacgcctcagattaggcgtgtcctggtgtcggacacg-----------acaccgacacatataattacacagaattatgtgatttt 135351  T
Q  123 tacaaattctttgctgtgtcagtgt 147  Q
      |||||| || || ||||| ||||    
T  135352 ctcaaattattagcagtgtcggtgt 135376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 15092 - 15047
Alignment:
Q  21 atctatgaagcactgacactcctcggattaggcgtgtcccggtgtc 66  Q
    |||||||||||||  ||||||||||||| ||||||||||| |||||    
T  15092 atctatgaagcacaaacactcctcggataaggcgtgtccccgtgtc 15047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 123
Target Start/End: Complemental strand, 23479 - 23439
Alignment:
Q  83 cgacaccgacacatgtaattacactgaattttgtgattttt 123  Q
    |||||||||||| | ||||||||||||||| ||||||||||    
T  23479 cgacaccgacacttataattacactgaattatgtgattttt 23439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 23641 - 23573
Alignment:
Q  23 ctatgaagcactgacactcctcggattaggcgtgtcccggtgtcggacacgcgtcgtgtccgacaccga 91  Q
    |||||||||||  ||||| || |||||| ||||||||| || ||||||||   ||||||||||||||||    
T  23641 ctatgaagcacaaacacttctgggattatgcgtgtcccagtctcggacacatatcgtgtccgacaccga 23573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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