View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19397_high_5 (Length: 260)
Name: NF19397_high_5
Description: NF19397
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19397_high_5 |
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Alignment Details
Target: chr2 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 17 - 250
Target Start/End: Original strand, 39225501 - 39225734
Alignment:
| Q |
17 |
ataaattaggctcatatctaatcttttaaagcacatttgaatagtggaattcagctgtaacatatttgttcactgaaaatggagggcataaacatcttct |
116 |
Q |
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| T |
39225501 |
ataaattaggctcatatctaatcttttaaagcacatttgaatagtggaattcagctgtaacatatttgttcactgaaaatggagggcataaacatcttct |
39225600 |
T |
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| Q |
117 |
catcttccctcatccataagtaatgttaactcccatatatcaaataacatcaacgacatgtattatttccatgttatacttggctatttctcatttccct |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
39225601 |
catcttccctcatccataagtaatgttaactcccatatatcaaataacatcaacgacatgtattatttccatgtcatacttggctatttctcatttccct |
39225700 |
T |
|
| Q |
217 |
atctaatgtcaaccatgatactgtgtaccctatg |
250 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
39225701 |
atctaatgtcaaccatgatactgtgtaccctatg |
39225734 |
T |
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