View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19397_low_6 (Length: 238)
Name: NF19397_low_6
Description: NF19397
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19397_low_6 |
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Alignment Details
Target: chr2 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 26210320 - 26210540
Alignment:
| Q |
1 |
tgattagttgtaaaaactactaacctctcttctccacaacatgaccatagcccatccgtaaaattaaggagccccgaaagtgtgacccgactactctcat |
100 |
Q |
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| T |
26210320 |
tgattagttgtaaaaactactaacctctcttctccacaacatgaccatagcccatccgtaaaattaaggagccccgaaagtgtgacccgactactctcat |
26210419 |
T |
|
| Q |
101 |
cacaacctgaaccagaaaacgatgttgttttatgtttcttagacttagacaacgactttgcaccatttttcttcgacattctatctgcggttaaatccac |
200 |
Q |
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|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26210420 |
cacaactcgaaccagaaaacgatgttgttttatgtttcttagacttagacaacgactttgcaccatttttcttcgacattctatctgcggttaaatccac |
26210519 |
T |
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| Q |
201 |
ggaacaatcaatatcttcaat |
221 |
Q |
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|||||||||||||||||||| |
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| T |
26210520 |
agaacaatcaatatcttcaat |
26210540 |
T |
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